NO02G06120.1, NO02G06120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G06120.1
Unique NameNO02G06120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1926
Alignment locationchr2:1635798..1638798 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1635798..1638798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G06120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G06120NO02G06120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G06120.1NO02G06120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G06120.1.cds1NO02G06120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06120.1.cds2NO02G06120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06120.1.cds3NO02G06120.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06120.1.cds4NO02G06120.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06120.1.cds5NO02G06120.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06120.1.cds6NO02G06120.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06120.1.cds7NO02G06120.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G06120.1 ID=NO02G06120.1|Name=NO02G06120.1|organism=Nannochloropsis oceanica|type=mRNA|length=1926bp
ATGCTGCATCTTGCGACCACCCGTCCCCTCCGTAGCCCCGGAAAGGTCCA
GCAGCAGCAGCGCCTTCTTGCACGCTTTTCCTCCTCGACGGCGGCGCAGG
ACAGGAGCAGCAGAGGAGGCAACGGTTCCTCCTCTTCCTCTTCCTCGTGG
TGGCACCAGCATCTGGGACTCCTGACCATCGCAGGGCTGGCCATTGCTGA
CCTGGTCGTGCTACCAACTACCATCGAGTTCATTAACGACTTCAAGGGCG
CCCAAGCGATCGCACAGGGCAACCTCCACACCTTGCTTCCATCCCGCGAG
GCTTCCGGTGTGGTTTTCGCCGCTCCCCCCCTCCTCCGCCCGTCCCTCCA
GCGCCAGATCCTTTCCTGCCTGGGCCCTCACTTGACCAGCAGCAGCAGCA
GCTCGGTCGGGCGGTACTACGTCATGTGTGGGGAGGAGGGGACGGGGAAG
AGCAGTTTGGCCAAGGCAGCGGCACGAGAGGTGGGGAAAGGAATAATTTA
CGTGGATGTCAGTAGCTCTCAGGGAGACCTTCCCGCCGCCATTCGTCGGG
CCTTGGGGGGACAGCACCGCCCATACCACTCCCGCCTCCTCGCCCTCCGT
GATCGCCTCCTCGCCCTCCCGCCCTCTCCCCCTGTGCCCACCCCTCTGGA
GGAAGCCGTAACTGCCTTGAACCGCGCCGCACGCCGCACCTCCTTCTCTC
CTTCTTCCTCCCCTTCCTCTTCCCCCTCCTTGGCCAGCACGCCCGTCACG
TTGCGGCAGCACCCTGCCTGGTCCTCGAGTGGGGGGATGGTAAGAGTCAA
CGACCTGGACAAACGCGAGGCCATCGCCTTGCTAAGCGGGGAGGGAGGGC
GGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGTCTCCAAGGCG
GTGGCTGCGGAGGTGTATGCGTTAGTGGGGGGAAGGGTGGCACACGTGGT
TAGGGCTGCGGAGATGATGAAGGTGGAGGGCAGGGGATTGGAAGAGATCG
CCCTCGACGCTTATCAGAGCATGCGTGCCGGCTTTGACCGCCTTGTCTCC
CTCAACCCGCCTCCCTTCCCTCCCTCCTCCTCGCCCTTCTCCACCTTTTC
CTCCTTCTCCACCTCCTCCTCAGTCGCGCCTTCCCCCTCCTCTCCTCCCG
GCCAGCGGCTTCTGGAGGCCCTCCTTCTATCTCCGAGCAGACAGCTGTCT
GTGCAGGCAGCCTCCGCCTTGCTGAACCTGGACGTGACCCGTTTGGTGGA
GAGCCACAGTCCCATCCTGGCCCTGGACTACAGCTTGCCCAATTCCTCCT
ACGTACGTTTTCGCTCTCCTCTCGCCGAGCGCTGTGCACACATCTATCTG
ATGGTGAGGGAGGGAGGGAGGGAGGAGGAGGTGCTTCAATGGTTCGTGTC
AGTCTTGCAAAGGGCTGCGGGGATAGGAAGGGACGGAAAGAGCGGGGACG
GAATGGGCTGCAGCAGCAGCGGAGGGAGGATAAAGGAGCTGGCCAGGAGG
ATGAAGTCTGAGGGAAGGGGGCAAGGGGGGGAGGAAGGAGAGGGAGGGAA
AACGGGGGTCAAGAGAAATGCAACCTTGGTCTTAGTGGCCTCGGCCCTCG
CCCTCTTGTACGTGGCAGTAGGAGGTGGTGGAGGAGGAAGGGAGTTTGGG
GGGAACTTTGCTTTTCCATTACCACCGAGGGCGGACGTAGCACGCGCGAA
TTTGAAGAAGGCGAGTGAGGGGGCTTGGAGGGCTTTGAAAGAGGGAATGG
GGATAGCCAGGGAGTCCGTCGGAATGGCAGTAGAGTATGCGGAGCAATGG
CGGGCGCGTAGAGGAGGAAGGGGAGGAGGAGGGAGGGGATGAGGACGGAT
GTAATCTAGTGTGTTATACAAGAGGTCCCAAAACGACAAATGAAGAAAGA
AAAATTCTCGTGTGGGAACGTCTCCA
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protein sequence of NO02G06120.1

>NO02G06120.1-protein ID=NO02G06120.1-protein|Name=NO02G06120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=614bp
MLHLATTRPLRSPGKVQQQQRLLARFSSSTAAQDRSSRGGNGSSSSSSSW
WHQHLGLLTIAGLAIADLVVLPTTIEFINDFKGAQAIAQGNLHTLLPSRE
ASGVVFAAPPLLRPSLQRQILSCLGPHLTSSSSSSVGRYYVMCGEEGTGK
SSLAKAAAREVGKGIIYVDVSSSQGDLPAAIRRALGGQHRPYHSRLLALR
DRLLALPPSPPVPTPLEEAVTALNRAARRTSFSPSSSPSSSPSLASTPVT
LRQHPAWSSSGGMVRVNDLDKREAIALLSGEGGREGGREGGREGGRVSKA
VAAEVYALVGGRVAHVVRAAEMMKVEGRGLEEIALDAYQSMRAGFDRLVS
LNPPPFPPSSSPFSTFSSFSTSSSVAPSPSSPPGQRLLEALLLSPSRQLS
VQAASALLNLDVTRLVESHSPILALDYSLPNSSYVRFRSPLAERCAHIYL
MVREGGREEEVLQWFVSVLQRAAGIGRDGKSGDGMGCSSSGGRIKELARR
MKSEGRGQGGEEGEGGKTGVKRNATLVLVASALALLYVAVGGGGGGREFG
GNFAFPLPPRADVARANLKKASEGAWRALKEGMGIARESVGMAVEYAEQW
RARRGGRGGGGRG*
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mRNA from alignment at chr2:1635798..1638798+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G06120.1 ID=NO02G06120.1|Name=NO02G06120.1|organism=Nannochloropsis oceanica|type=mRNA|length=3001bp|location=Sequence derived from alignment at chr2:1635798..1638798+ (Nannochloropsis oceanica)
ATGCTGCATCTTGCGACCACCCGTCCCCTCCGTAGCCCCGGAAAGGTCCA
GCAGCAGCAGCGCCTTCTTGCACGCTTTTCCTCCTCGACGGTAACCGCCA
ATGTGTTTGATGTATTTGATGTATATGCCTTGCTTTGGATGGGTAAGAGG
GATTGGTGCCGAATTGTTACTAGTCCCCCTTGCCGGATCATCTCCGACTT
GCCCACGGCACATTCACACACGTACACGTCTTTCTTCTTCTAGGCGGCGC
AGGACAGGAGCAGCAGAGGAGGCAACGGTTCCTCCTCTTCCTCTTCCTCG
TGGTGGCACCAGCATCTGGGACTCCTGACCATCGCAGGGCTGGCCATTGC
TGACCTGGTCGTGCTACCAACTACCATCGAGGTGAGGGAGTGGGAAGGAA
AAGGGAGGACGGGATGACAAGAGGACAGAACGACCAAATTGCCGGGTTCA
GCAAGGACGTATTAGGGGCGATATATGCGGGTAATAATGGAAGCGAAGGT
GTACTAACTAACATGCAGATCGTCACATACCTTCCTCTCTCAAATTCAAG
CTCAGTGACCCTCCCTCTCCCCCCCCTTTCATTCTCTCCCTGCTTCTCCT
TCACCAGTTCATTAACGACTTCAAGGGCGCCCAAGCGATCGCACAGGGCA
ACCTCCACACCTTGCTTCCATCCCGCGAGGCTTCCGGTGTAAGTCTTAGT
CGGGGGGGAGGGAGGGAAGGAGGCAGGCAGGCGAGAAGCAGAAGAGGGCG
GGCTTAGGAAGAGCCCGAACGGCATCACAGGCCGCTGAAGAGGACGAGGT
GGGTAGGTAGGTACAAGAGGAGGCAAAAACCTAATAAAAACGGAACTGGT
GAAATAGAGAGTTTTAGCAGTACAGGGTGTCTACCGTGACTGCATTCCTT
TTCCCCCCTCCCCATCCGCCCCTTGCCCTTCCCCTCCCTCTCCCCCCTCC
TTCCTTCCTTCCTCTCACACAGGTGGTTTTCGCCGCTCCCCCCCTCCTCC
GCCCGTCCCTCCAGCGCCAGATCCTTTCCTGCCTGGGCCCTCACTTGACC
AGCAGCAGCAGCAGCTCGGTCGGGCGGTACTACGTCATGTGTGGGGAGGA
GGGGACGGGGAAGAGCAGTTTGGCCAAGGCAGCGGCACGAGAGGTGGGGA
AAGGAATAATTTACGTGGATGTCAGTAGCTCTCAGGGAGACCTTCCCGCC
GCCATTCGTCGGGCCTTGGGGGGACAGCACCGCCCATACCACTCCCGCCT
CCTCGCCCTCCGTGATCGCCTCCTCGCCCTCCCGCCCTCTCCCCCTGTGC
CCACCCCTCTGGAGGAAGCCGTAACTGCCTTGAACCGCGCCGCACGCCGC
ACCTCCTTCTCTCCTTCTTCCTCCCCTTCCTCTTCCCCCTCCTTGGCCAG
CACGCCCGTCACGGTCATTTTCGACGGCCTCCACAGCCTCAAGCCCTCCC
CCTCCTCCCTCCTCGAGCTCCAATCCCTCCTCAGCGGACCGCACTCCCCC
CCTCCTTCCTTTCCCTCCTCGTTCTCCCTCCCGGCCCCCTCCTCGGGCAG
TTGCGGCAGCACCCTGCCTGGTCCTCGAGTGGGGGGATGGTAAGAGTCAA
CGACCTGGACAAACGCGAGGCCATCGCCTTGCTAAGCGGGGAGGGAGGGC
GGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGTCTCCAAGGCG
GTGGCTGCGGAGGTGTATGCGTTAGTGGGGGGAAGGGTGGCACACGTGGT
TAGGGCTGCGGAGATGATGAAGGTGGAGGGCAGGGGATTGGAAGGTACGA
GGGGAGGTGGGGGGGAGGAGGGGAGGGAGGGAAGGAAAGGGGCTGGTTGC
ATTGTTGGAGGAATAGAGAAATGACTCCTCCATCCCTCCCTCCCCATATC
CCTCCTTCCTTTATTCTCCGACAGAGATCGCCCTCGACGCTTATCAGAGC
ATGCGTGCCGGCTTTGACCGCCTTGTCTCCCTCAACCCGCCTCCCTTCCC
TCCCTCCTCCTCGCCCTTCTCCACCTTTTCCTCCTTCTCCACCTCCTCCT
CAGTCGCGCCTTCCCCCTCCTCTCCTCCCGGCCAGCGGCTTCTGGAGGCC
CTCCTTCTATCTCCGAGCAGACAGCTGTCTGTGCAGGCAGCCTCCGCCTT
GCTGAACCTGGACGTGACCCGTTTGGTGGAGAGCCACAGGTGGGGAGCCT
GCTGTGTGCTCGCCCTTTTTCTCCTTTCCCGATCCCTCTCTCCTTTCCCT
CTTGTCTCCTATTGTCGTATGCTATCGCACGTCAACTGTCACCCGTCTCC
TTTCCCCCCTTCCCCACTTCCCCCCCGCTTTCAGTCCCATCCTGGCCCTG
GACTACAGCTTGCCCAATTCCTCCTACGTACGTTTTCGCTCTCCTCTCGC
CGAGCGCTGTGCACACATCTATCTGATGGTGAGGGAGGGAGGGAGGGAGG
AGGAGGTGCTTCAATGGTTCGTGTCAGTCTTGCAAAGGGCTGCGGGGATA
GGAAGGGACGGAAAGAGCGGGGACGGAATGGGCTGCAGCAGCAGCGGAGG
GAGGATAAAGGAGCTGGCCAGGAGGATGAAGTCTGAGGGAAGGGGGCAAG
GGGGGGAGGAAGGAGAGGGAGGGAAAACGGGGGTCAAGAGAAATGCAACC
TTGGTCTTAGTGGCCTCGGCCCTCGCCCTCTTGTACGTGGCAGTAGGAGG
TGGTGGAGGAGGAAGGGAGTTTGGGGGGAACTTTGCTTTTCCATTACCAC
CGAGGGCGGACGTAGCACGCGCGAATTTGAAGAAGGCGAGTGAGGGGGCT
TGGAGGGCTTTGAAAGAGGGAATGGGGATAGCCAGGGAGTCCGTCGGAAT
GGCAGTAGAGTATGCGGAGCAATGGCGGGCGCGTAGAGGAGGAAGGGGAG
GAGGAGGGAGGGGATGAGGACGGATGTAATCTAGTGTGTTATACAAGAGG
TCCCAAAACGACAAATGAAGAAAGAAAAATTCTCGTGTGGGAACGTCTCC
A
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Coding sequence (CDS) from alignment at chr2:1635798..1638798+

>NO02G06120.1 ID=NO02G06120.1|Name=NO02G06120.1|organism=Nannochloropsis oceanica|type=CDS|length=1842bp|location=Sequence derived from alignment at chr2:1635798..1638798+ (Nannochloropsis oceanica)
ATGCTGCATCTTGCGACCACCCGTCCCCTCCGTAGCCCCGGAAAGGTCCA
GCAGCAGCAGCGCCTTCTTGCACGCTTTTCCTCCTCGACGGCGGCGCAGG
ACAGGAGCAGCAGAGGAGGCAACGGTTCCTCCTCTTCCTCTTCCTCGTGG
TGGCACCAGCATCTGGGACTCCTGACCATCGCAGGGCTGGCCATTGCTGA
CCTGGTCGTGCTACCAACTACCATCGAGTTCATTAACGACTTCAAGGGCG
CCCAAGCGATCGCACAGGGCAACCTCCACACCTTGCTTCCATCCCGCGAG
GCTTCCGGTGTGGTTTTCGCCGCTCCCCCCCTCCTCCGCCCGTCCCTCCA
GCGCCAGATCCTTTCCTGCCTGGGCCCTCACTTGACCAGCAGCAGCAGCA
GCTCGGTCGGGCGGTACTACGTCATGTGTGGGGAGGAGGGGACGGGGAAG
AGCAGTTTGGCCAAGGCAGCGGCACGAGAGGTGGGGAAAGGAATAATTTA
CGTGGATGTCAGTAGCTCTCAGGGAGACCTTCCCGCCGCCATTCGTCGGG
CCTTGGGGGGACAGCACCGCCCATACCACTCCCGCCTCCTCGCCCTCCGT
GATCGCCTCCTCGCCCTCCCGCCCTCTCCCCCTGTGCCCACCCCTCTGGA
GGAAGCCGTAACTGCCTTGAACCGCGCCGCACGCCGCACCTCCTTCTCTC
CTTCTTCCTCCCCTTCCTCTTCCCCCTCCTTGGCCAGCACGCCCGTCACG
TTGCGGCAGCACCCTGCCTGGTCCTCGAGTGGGGGGATGGTAAGAGTCAA
CGACCTGGACAAACGCGAGGCCATCGCCTTGCTAAGCGGGGAGGGAGGGC
GGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGTCTCCAAGGCG
GTGGCTGCGGAGGTGTATGCGTTAGTGGGGGGAAGGGTGGCACACGTGGT
TAGGGCTGCGGAGATGATGAAGGTGGAGGGCAGGGGATTGGAAGAGATCG
CCCTCGACGCTTATCAGAGCATGCGTGCCGGCTTTGACCGCCTTGTCTCC
CTCAACCCGCCTCCCTTCCCTCCCTCCTCCTCGCCCTTCTCCACCTTTTC
CTCCTTCTCCACCTCCTCCTCAGTCGCGCCTTCCCCCTCCTCTCCTCCCG
GCCAGCGGCTTCTGGAGGCCCTCCTTCTATCTCCGAGCAGACAGCTGTCT
GTGCAGGCAGCCTCCGCCTTGCTGAACCTGGACGTGACCCGTTTGGTGGA
GAGCCACAGTCCCATCCTGGCCCTGGACTACAGCTTGCCCAATTCCTCCT
ACGTACGTTTTCGCTCTCCTCTCGCCGAGCGCTGTGCACACATCTATCTG
ATGGTGAGGGAGGGAGGGAGGGAGGAGGAGGTGCTTCAATGGTTCGTGTC
AGTCTTGCAAAGGGCTGCGGGGATAGGAAGGGACGGAAAGAGCGGGGACG
GAATGGGCTGCAGCAGCAGCGGAGGGAGGATAAAGGAGCTGGCCAGGAGG
ATGAAGTCTGAGGGAAGGGGGCAAGGGGGGGAGGAAGGAGAGGGAGGGAA
AACGGGGGTCAAGAGAAATGCAACCTTGGTCTTAGTGGCCTCGGCCCTCG
CCCTCTTGTACGTGGCAGTAGGAGGTGGTGGAGGAGGAAGGGAGTTTGGG
GGGAACTTTGCTTTTCCATTACCACCGAGGGCGGACGTAGCACGCGCGAA
TTTGAAGAAGGCGAGTGAGGGGGCTTGGAGGGCTTTGAAAGAGGGAATGG
GGATAGCCAGGGAGTCCGTCGGAATGGCAGTAGAGTATGCGGAGCAATGG
CGGGCGCGTAGAGGAGGAAGGGGAGGAGGAGGGAGGGGATGA
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Synonyms
Publications