NO02G05870, NO02G05870 (gene) Nannochloropsis oceanica

Overview
NameNO02G05870
Unique NameNO02G05870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1974
Alignment locationchr2:1565999..1567972 +

Link to JBrowse

Properties
Property NameValue
DescriptionDi-n-acetylchitobiase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1565999..1567972 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0008061chitin binding
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001223Glyco_hydro18cat
IPR011583Chitinase_II
Homology
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_005853688.1 (di-n-acetylchitobiase [Nannochloropsis gaditana CCMP526] >EKU22669.1 di-n-acetylchitobiase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 531.2 bits (1367), Expect = 3.300e-147
Identity = 272/413 (65.86%), Postives = 318/413 (77.00%), Query Frame = 0
Query:   45 NTTLCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVAWTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTDEEEEQGK 458
            N TLCQPIQGQRAKEV+GFR+   N++++E YDW+VV+TVAW P PQL+C AHA GARV+MA P PLPI A DDATARA+WI  TV +IQ+QFLDG+VFDFE PLLP+DP N  YV LV ETRAALHA +PGSQV VCLAW+PHGVDGRYYDN+ L++AADL YIM YDTRSQ++ QC+ASANAALPA  WGL EY+TLGADPQK++LGVPWYGYDY C+  GK    G+G     GER                      XXXXXXXXXXXXXXXX  ++P  V C I +VPFRGVGCSDAAG QVPYS IQ RL AG+T+TGR WD YMQTPFYNY+D GDGS+HQVHYDD+ESLR+KY +AR+LGLRGVGPYTFDD+   GEGG+EG +A   MW  LR + + +   G+
Sbjct:   41 NITLCQPIQGQRAKEVFGFRNRGSNDSRFEGYDWNVVTTVAWNPSPQLMCVAHAHGARVVMAAPEPLPILAGDDATARAVWIATTVTEIQTQFLDGIVFDFEAPLLPTDPANSKYVSLVAETRAALHARIPGSQVSVCLAWSPHGVDGRYYDNIGLIEAADLGYIMGYDTRSQVMAQCVASANAALPALAWGLREYMTLGADPQKLVLGVPWYGYDYRCIPQGKQGEDGSGR----GER----------------------XXXXXXXXXXXXXXXXGRVDPTTVTCAIELVPFRGVGCSDAAGKQVPYSTIQARLTAGETSTGRRWDGYMQTPFYNYVDLGDGSVHQVHYDDSESLRVKYDLARQLGLRGVGPYTFDDVWEEGEGGREGADA---MWAVLRMYVEGDTATGE 424          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: EWM30102.1 (di-n-acetylchitobiase precursor [Nannochloropsis gaditana])

HSP 1 Score: 434.9 bits (1117), Expect = 3.200e-118
Identity = 231/353 (65.44%), Postives = 268/353 (75.92%), Query Frame = 0
Query:  105 MAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTDEEEEQGK 458
            MA P PLPI A DDATARA+WI  TV +IQ+QFLDG+VFDFE PLLP+DP N  YV LV ETRAALHA +PGSQV VCLAW+PHGVDGRYYDN+ L++AADL YIM YDTRSQ++ QC+ASANAALPA  WGL EY+TLGADPQK++LGVPWYGYDY C+  G+    G+G                          XXXXXXXXXXXXXXXXXXXX  ++P  V C + +VPFRGVGCSDAAG QVPYS IQ RL AG+T+TGR WD YMQTPFYNY+D GDGS+HQVHYDD+ESLR+KY +AR+LGLRGVGPYTFDD+   GEGG+EG E A  MW  LR + + +   G+
Sbjct:    1 MAAPEPLPILAGDDATARAVWIATTVTEIQTQFLDGIVFDFEAPLLPTDPANSKYVSLVAETRAALHARIPGSQVSVCLAWSPHGVDGRYYDNIGLIEAADLGYIMGYDTRSQVMAQCVASANAALPALAWGLREYMTLGADPQKLVLGVPWYGYDYRCIPQGEQGENGSG--------------------------XXXXXXXXXXXXXXXXXXXXGRVDPTTVTCAMELVPFRGVGCSDAAGKQVPYSTIQARLTAGETSTGRRWDGYMQTPFYNYVDLGDGSVHQVHYDDSESLRVKYDLARQLGLRGVGPYTFDDVWEEGEGGREG-EGADAMWAVLRMYVEGDIATGE 326          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: GAX78080.1 (hypothetical protein CEUSTIGMA_g5522.t1 [Chlamydomonas eustigma])

HSP 1 Score: 265.8 bits (678), Expect = 2.600e-67
Identity = 150/403 (37.22%), Postives = 211/403 (52.36%), Query Frame = 0
Query:   47 TLCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVAWTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFT 450
            +LC+P+Q    +EV+GF   +P  + +E++D+  +ST+AWT  P L+C+AH+ GARV       L      DA+ R+ W+ + V Q +S  LDG+ FDFE P  P   + + Y L V       H  +PGSQV V + W+P+ VDGR YD   L  AADL ++MSYD +SQI G+CIA+AN+       GL ++L LG    K++LG+PWYGYDY C                   + D TG P                                 + P D  C +A VPF+G  CSDAAG Q  Y  I E L +G+  T    D+   +PF+NY +  DGS+HQ+ +D+ ESL +KY +A +L LRGVG +  D L           + +  MWEAL+ F+
Sbjct:   48 SLCKPVQRHVDREVFGFLPPNPRKS-WESFDFSQLSTIAWTTDPALMCYAHSMGARVTADGRQGL-AEVLTDASKRSQWVFDAVQQAESLHLDGINFDFEDPTEPGSSLALGYSLTVKHAAEVFHRHIPGSQVSVDVPWSPYDVDGRNYDWAGLAAAADLLFVMSYDMQSQIYGRCIAAANSPAALVEKGLRQWLDLGVPRSKIVLGLPWYGYDYEC-------------------QPDSTGRP---------------------------------MQPSDTVCHLAHVPFQGAPCSDAAGSQKGYLEIMEILRSGRNTTHMQMDSTEMSPFFNY-EAKDGSIHQIWFDNPESLSVKYQMASDLNLRGVGIWNLDTLDYESSDPVIHHQTSE-MWEALKIFS 394          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_020310783.1 (di-N-acetylchitobiase [Oncorhynchus kisutch])

HSP 1 Score: 247.3 bits (630), Expect = 9.600e-62
Identity = 142/407 (34.89%), Postives = 205/407 (50.37%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVA--WTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTDEE 453
            LCQ I+ ++  EV+ F   D     +++YDW  V+TVA       +L+CHAH++GAR+++     +P     D   R  WIT+ V+  + QF+DG+  D E  +  S P       LV ET  A H  +PGSQV   +AW+P  +DGR YD   + ++ DL ++MSYD +SQI G C+A ANA    T+   ++YL +  DP+K+++GVPWYGYDY C+               F + G                                              C +A VPFRG  CSDAAG Q+PYS + +++    + +GR+WD     P+YNY D+  G +HQV YDD ES+ LK    RELGL+G G +  + L    +     +E +R MW AL    D +
Sbjct:   26 LCQQIRDEKDFEVFVF---DVGKKAWKSYDWGKVTTVAAFGKYDAELMCHAHSKGARLVLKGDVSIPEMV--DPANRTAWITSKVDLAKRQFMDGINIDIEQEVADSSPEYYTXTALVKETTEAFHREIPGSQVSFDVAWSPKCIDGRCYDYAAIAESCDLLFVMSYDEQSQIWGDCVAMANAPFNQTQSAYDQYLAMKIDPKKLVMGVPWYGYDYPCL--------------DFSQEG---------------------------------------------VCSLAKVPFRGAPCSDAAGRQIPYSFMMKQI--NGSMSGRLWDEVQLAPYYNYKDQ-RGQIHQVWYDDPESIALKVAYVRELGLKGTGMWCGNLLDYSND--SVAQEQSRDMWNALMGCQDAQ 363          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_021455634.1 (di-N-acetylchitobiase [Oncorhynchus mykiss])

HSP 1 Score: 246.5 bits (628), Expect = 1.600e-61
Identity = 142/407 (34.89%), Postives = 204/407 (50.12%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVA--WTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTDEE 453
            LCQ I+ ++  EV+ F   D     +++YDW  V+TVA       +L+CHAH++GAR+++     + I    D   R  WIT+ V+  + QF+DG+  D E  +  S P       LV ET  A H  +PGSQV   +AW+P  +DGR YD   + ++ DL ++MSYD +SQI G C+A ANA    T+   ++YL +  DP+K+++GVPWYGYDY C+               F + G                                              C +A VPFRG  CSDAAG Q+PYS + +++    + +GR+WD     P+YNY D+  G +HQV YDD ES+ LK    RELGL+G G +  + L          +E +R MW AL    D +
Sbjct:   26 LCQQIRDEKDFEVFVF---DVGKKAWKSYDWGKVTTVAAFGKYDAELMCHAHSKGARLVL--KGDVSIHEMVDPANRTAWITSKVDLAKRQFMDGINIDIEQEVADSSPEYYTLTALVKETTEAFHREIPGSQVSFDVAWSPKCIDGRCYDYAAIAESCDLLFVMSYDEQSQIWGDCVAMANAPFNQTQSAYDQYLAMMIDPKKLVMGVPWYGYDYPCL--------------DFSQEG---------------------------------------------VCSLAKVPFRGAPCSDAAGRQIPYSFMMKQI--NGSLSGRLWDEVQLAPYYNYKDQ-RGQIHQVWYDDPESIALKVAYVRELGLKGTGMWCGNLLD--YSNNSVAQEQSRDMWNALMGCQDAQ 363          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_024256842.1 (di-N-acetylchitobiase-like [Oncorhynchus tshawytscha] >XP_024233453.1 di-N-acetylchitobiase-like [Oncorhynchus tshawytscha])

HSP 1 Score: 245.0 bits (624), Expect = 4.800e-61
Identity = 141/407 (34.64%), Postives = 204/407 (50.12%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVA--WTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTDEE 453
            LCQ I+ ++  EV+ F   D     +++YDW  V+TVA       +L+CHAH++GAR+++     +P     D   R  WI + V+  + QF+DG+  D E  +  S P       LV ET  A H  +PGSQV   +AW+P  +DGR YD   + ++ DL ++MSYD +SQI G C+A ANA    T+   ++YL +  DP+K+++GVPWYGYDY C+               F + G                                              C +A VPFRG  CSDAAG Q+PYS + +++    + +GR+WD     P+YNY D+  G +HQV YDD ES+ LK    RELGL+G G +  + L    +     +E +R MW AL    D +
Sbjct:   26 LCQQIRDEKDFEVFVF---DVGKKAWKSYDWGKVTTVAAFGKYDAELMCHAHSKGARLVLKGDVSIPEMV--DPANRTAWIISKVDLAKRQFMDGINIDIEQEVADSSPEYYTLTALVKETTEAFHREIPGSQVSFDVAWSPKCIDGRCYDYTAIAESCDLLFVMSYDEQSQIWGDCVAMANAPFNQTQSAYDQYLAMKIDPKKLVMGVPWYGYDYPCL--------------DFSQEG---------------------------------------------VCSLAKVPFRGAPCSDAAGRQIPYSFMMKQI--NGSMSGRLWDEVQLAPYYNYKDQ-RGQIHQVWYDDPESIALKVAYVRELGLKGAGMWCGNLLDYSND--SVAQEQSRDMWNALMGCQDAQ 363          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_006635336.1 (PREDICTED: di-N-acetylchitobiase isoform X2 [Lepisosteus oculatus])

HSP 1 Score: 244.6 bits (623), Expect = 6.200e-61
Identity = 144/401 (35.91%), Postives = 200/401 (49.88%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVAWTPV--PQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALR 447
            LC+ I   +  EVY F   D     +++YDW  V+TVA      P+L+C+AH++GAR+++     +P+S   D + R  WI   V   + QF+DG+  D E  +  + P       LV ET  A H  +PGSQV   +AW+P  +D R YD + + + +DL ++MSYD +SQI G CIA ANA L  T    ++Y+TL  DP+K+++GVPWYGYDYTCV                 + G                                              C I  VPFRG  CSDAAG QVPY I+ +++    + +GRMWD     P+YNY D+  G +HQV YDD ES+  K    RE GLRG+G +   +L   G       +  R MW AL+
Sbjct:   32 LCKQITDVKEFEVYVF---DVGGKTWKSYDWSKVTTVAAFGKFDPELMCYAHSKGARLVL--KGDVPLSDIVDPSNRTAWILEKVTLAKKQFMDGINIDIEQEVEEASPEYYALTALVRETTEAFHREIPGSQVSFDVAWSPKCIDKRCYDYVAIAEVSDLVFVMSYDEQSQIWGDCIAKANAPLNQTLTAYDDYITLKIDPKKLVMGVPWYGYDYTCV--------------ELSQEG---------------------------------------------ICTIRKVPFRGAPCSDAAGRQVPYKIMMKQI--NGSISGRMWDEVQHAPYYNYKDD-QGQIHQVWYDDPESISQKAAYVRERGLRGIGMWN-GNLLDYG-SNPVARQQTRAMWSALK 363          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_024002076.1 (LOW QUALITY PROTEIN: di-N-acetylchitobiase [Salvelinus alpinus])

HSP 1 Score: 244.2 bits (622), Expect = 8.100e-61
Identity = 141/407 (34.64%), Postives = 203/407 (49.88%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVA--WTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTDEE 453
            LCQ I+ ++  EV+ F   D     +++YDW  V+TVA       +L+CHAH++GAR+++     +P     D   R  WIT+ V+  + QF+DG+  D E  +  S P       LV ET  A H  +PGSQV   +AW+P  +DGR YD   + ++ DL ++MSYD +SQI G C+A ANA    T+   ++YL +  DP+K+++G+PWYGYDY C+               F + G                                              C +A VPFRG  CSDAAG Q+PYS + +++    + +GR+WD     P+YNY D+  G +HQV YDD ES+ LK    RELGL+G G +  + L           E +R MW AL    D +
Sbjct:   26 LCQQIRDEKDFEVFVF---DVGKKAWKSYDWGKVTTVAAFGKYDAELMCHAHSKGARLVLKGDVSIPEMV--DPANRTAWITSKVDLAKRQFMDGINIDIEQEVADSSPEYYTLTALVKETTEAFHREIPGSQVSFDVAWSPKCIDGRCYDYAAIAESCDLLFVMSYDEQSQIWGDCVAMANAPFNQTQSAYDQYLXMKIDPKKLVMGLPWYGYDYPCL--------------DFSQEG---------------------------------------------VCSLAKVPFRGAPCSDAAGRQIPYSFMMKQI--NGSLSGRLWDEVQLAPYYNYKDQ-RGQIHQVWYDDPESIALKVAYVRELGLKGTGMWCGNLLD--YSNNPVAREQSRDMWNALMGCQDAQ 363          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_018589751.1 (PREDICTED: di-N-acetylchitobiase isoform X1 [Scleropages formosus])

HSP 1 Score: 242.7 bits (618), Expect = 2.400e-60
Identity = 147/401 (36.66%), Postives = 195/401 (48.63%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVA--WTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALR 447
            LC+PI GQ+  EV  F   D   T ++ YDWD V+TVA      P L+C AH++GARV++     +P+S   D   R  WIT  VN  ++QF+DG+  D E  +  + P       LV E+    H  +PGSQV   +AW+P  +D R YD   + K+ D  ++MSYD  SQI G CIA ANA    T  G E+YL L  DPQK+++GVPWYGYDY C+                 E G                                              C I  V F+G  CSDAAG Q+PYS I +++    + TGR+WD +   P+YNY  E DG++HQV YDD  S+ LK      LGLRG G +  D L           E  + MW+ L+
Sbjct:   32 LCKPITGQKDYEVLVF---DVGGTDWKYYDWDTVTTVAIFGKYDPNLMCFAHSKGARVVL--KGDVPVSDIVDPKNRTAWITEKVNLAKAQFMDGINIDIEQEVGKNSPEYYALTALVEESTETFHREIPGSQVSFDVAWSPDCIDKRCYDYTAIAKSCDFIFVMSYDEESQIWGDCIAMANAPYIKTLIGYEQYLMLNIDPQKIVMGVPWYGYDYPCL--------------KLSEEG---------------------------------------------VCSIPKVSFKGAPCSDAAGRQIPYSTIMKQV--NNSMTGRLWDPFQLAPYYNYKAE-DGTIHQVWYDDPLSISLKTQNVWLLGLRGTGMWNGDLLD--YSDNSIAREQTQAMWKVLK 363          
BLAST of NO02G05870 vs. NCBI_GenBank
Match: XP_021259984.1 (di-N-acetylchitobiase [Numida meleagris])

HSP 1 Score: 242.3 bits (617), Expect = 3.100e-60
Identity = 140/400 (35.00%), Postives = 196/400 (49.00%), Query Frame = 0
Query:   48 LCQPIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVA--WTPVPQLVCHAHARGARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLLPSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNLMKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKMILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPLDVNCPIAMVPFRGVGCSDAAGVQVPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAESLRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEAL 446
            LCQP+ G R  EV+ F   D  N  +++YDW  ++TVA      P+LVC AH++GARV++     +P+    D   RA+WI+  V+  + Q++DG+  D E  +  +         LV ET  A H  +PGSQV   +AW+P  +D R Y+   +  A D  ++MSYD +SQI   CIA ANA  P T  G EEY+T+G DP+K+++GVPWYGYDY C+   +                                                           D  C ++ VPFRG  CSDAAG QVPY  I +++    + +G +WD    +PFY Y D   G  HQV YDD  S+ LK    +  GLRG+G +  + L    E     E+    MW+AL
Sbjct:   32 LCQPVAGTRGFEVFVF---DVGNEAWKSYDWSKITTVAAFGKYNPELVCFAHSKGARVVL--KGDVPLEEIIDPAKRAVWISQQVDLAKKQYMDGINIDIEQEVNETSSEYYALTELVKETTDAFHKEIPGSQVTFDVAWSPACIDRRCYNYTGIADACDFLFVMSYDVQSQIWTDCIAKANAPYPQTLVGYEEYITMGIDPKKLVMGVPWYGYDYVCLNLSE-----------------------------------------------------------DHVCSLSKVPFRGAPCSDAAGHQVPYGAIMKQV--NSSISGALWDEIQNSPFYEYKD-SLGHFHQVWYDDPHSISLKAAYMKNRGLRGIGMWNGNSLDYSREA--VAEKQTEAMWQAL 362          
The following BLAST results are available for this feature:
BLAST of NO02G05870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853688.13.300e-14765.86di-n-acetylchitobiase [Nannochloropsis gaditana CC... [more]
EWM30102.13.200e-11865.44di-n-acetylchitobiase precursor [Nannochloropsis g... [more]
GAX78080.12.600e-6737.22hypothetical protein CEUSTIGMA_g5522.t1 [Chlamydom... [more]
XP_020310783.19.600e-6234.89di-N-acetylchitobiase [Oncorhynchus kisutch][more]
XP_021455634.11.600e-6134.89di-N-acetylchitobiase [Oncorhynchus mykiss][more]
XP_024256842.14.800e-6134.64di-N-acetylchitobiase-like [Oncorhynchus tshawytsc... [more]
XP_006635336.16.200e-6135.91PREDICTED: di-N-acetylchitobiase isoform X2 [Lepis... [more]
XP_024002076.18.100e-6134.64LOW QUALITY PROTEIN: di-N-acetylchitobiase [Salvel... [more]
XP_018589751.12.400e-6036.66PREDICTED: di-N-acetylchitobiase isoform X1 [Scler... [more]
XP_021259984.13.100e-6035.00di-N-acetylchitobiase [Numida meleagris][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05870.1NO02G05870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550587gene_1178Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05870.1NO02G05870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05870 ID=NO02G05870|Name=NO02G05870|organism=Nannochloropsis oceanica|type=gene|length=1974bp
ATGGCTACAAACCATCCGCGGCGGCACTACCGTCGCCCGCTGCTTTTCCA
CCTGTCTCTTCAATTCGCCCTTGCCTTTGTTACTGCCGCGGCCGCAGCCT
CCCCTGGTAGCCCTTCCCCCTGTCCGTGCGAGAACACCACGCTTTGCCAG
CCTATCCAAGGCCAGCGGGCCAAGGAAGTCTACGGCTTTCGGGACGGAGA
CCCCAACAACACCAAGTACGAGACTTACGACTGGGACGTAGTCAGTACCG
TGGCCTGGACACCGGTGCCTCAATTGGTCTGCCATGCCCACGCTCGGGGT
GCGCGCGTGgtaagtcagggtgttgacgtgccgtcttgttataattcaaa
aatctcacggggggactttgtgtggttttgggggacggggagacaggggt
ttctgcttgtaattgagatgcccacccttattctcggcgactggtacaag
gggcccctggtaggctgtggtattgcgtcgagtttgtggacgagacggaa
agaagagtgctgcgaggggttgcttggttgtcgtccgcaccccgaggaaa
acgtgaccggtatatgtagccctttttctgtgtaacctgaataccacacg
agccttggtacaaaatggtcaatgagcttagtgttacgattgcgagtact
ttcgtggttttgattgtttgttgccctcattgtcaaacatcacggagccc
ttggattggtgcggacagagaagcgagtgcatgatgaatcagaatcaata
gggtgcaaccctcaccgctcatcaccgcagaagagcgtgtcaccacctcg
ttctttcttccacctcaccctctgtctccctccttccctccttacccgct
atacccccatatagATCATGGCCCCCCCAAACCCCCTTCCCATCTCCGCC
TCCGATGACGCCACCGCCCGGGCCATCTGGATCACCAACACCGTCAATCA
AATCCAATCCCAGTTTCTCGACGGCATGGTTTTTGATTTTGAGGGACCCC
TGCTGCCTAGTGACCCGATGAATGTTAATTACGTCTTGCTGGTGAATGAG
ACAAGAGCGGCGTTACACGCGGCCGTGCCAGGCTCTCAGGTGGGCGTGTG
TTTGGCTTGGAACCCCCACGGCGTCGATGGACGGTACTACGACAATCTAA
ACCTGATGAAGGCGGCCGACTTGGCCTACATCATGAGCTATGACACACGG
TCACAAATTCTCGGTCAGTGCATCGCAAGTGCCAACGCCGCCTTGCCGGC
AACGAGGTGGGGACTTGAAGAGTACCTTACCCTTGGGGCAGATCCGCAAA
AAATGATTCTGGGCGTTCCGTGGTACGGATATGATTATACGTGTGTGGGA
GGAGGGAAAGGAAGAAGGGGGGGGAATGGAACGACGCGTCATTTTGGCGA
GCGTGGGGATGAAACTGGGTCCCCGGCTCTGGCCATGATGTTGGAAATGA
AGAGGGAGGAGGAGGAGGAGGAGGAGTGGGAGGAGGAGAAGCAGGAGGAG
GAGGAGGAGGAGGGGAATGAAGAGATTAATCCTCTGGATGTAAACTGCCC
GATAGCCATGGTGCCCTTCCGAGGTGTGGGCTGCTCTGATGCCGCCGGTG
TCCAAGTACCCTATTCCATCATACAGGAGCGGTTGGTCGCGGGTAAGACG
GCCACGGGTCGGATGTGGGACGCATACATGCAAACGCCTTTCTACAACTA
TATAGACGAAGGGGATGGGAGCCTGCACCAGGTGCATTACGATGACGCGG
AATCCCTGCGGTTGAAGTATGGCGTGGCGCGAGAGCTGGGATTGCGGGGA
GTGGGACCCTATACGTTTGATGACTTACCCGGGGTTGGAGAGGGAGGGAA
GGAGGGGGAGGAGGCGGCAAGGGGAATGTGGGAGGCATTGAGGGCTTTCA
CAGACGAGGAAGAAGAGCAGGGGAAGGAGCGGAAGGGGGAGAGGAAGAGG
GGGTTGAGGAAGGGAGGAGGGTGA
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protein sequence of NO02G05870.1

>NO02G05870.1-protein ID=NO02G05870.1-protein|Name=NO02G05870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MATNHPRRHYRRPLLFHLSLQFALAFVTAAAAASPGSPSPCPCENTTLCQ
PIQGQRAKEVYGFRDGDPNNTKYETYDWDVVSTVAWTPVPQLVCHAHARG
ARVIMAPPNPLPISASDDATARAIWITNTVNQIQSQFLDGMVFDFEGPLL
PSDPMNVNYVLLVNETRAALHAAVPGSQVGVCLAWNPHGVDGRYYDNLNL
MKAADLAYIMSYDTRSQILGQCIASANAALPATRWGLEEYLTLGADPQKM
ILGVPWYGYDYTCVGGGKGRRGGNGTTRHFGERGDETGSPALAMMLEMKR
EEEEEEEWEEEKQEEEEEEGNEEINPLDVNCPIAMVPFRGVGCSDAAGVQ
VPYSIIQERLVAGKTATGRMWDAYMQTPFYNYIDEGDGSLHQVHYDDAES
LRLKYGVARELGLRGVGPYTFDDLPGVGEGGKEGEEAARGMWEALRAFTD
EEEEQGKERKGERKRGLRKGGG*
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Synonyms
Publications