NO02G05770, NO02G05770 (gene) Nannochloropsis oceanica

Overview
NameNO02G05770
Unique NameNO02G05770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4780
Alignment locationchr2:1539537..1544316 -

Link to JBrowse

Properties
Property NameValue
DescriptionDynamin family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1539537..1544316 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR022812Dynamin_SF
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
BLAST of NO02G05770 vs. NCBI_GenBank
Match: OJX38081.1 (hypothetical protein BGO78_08595 [Chloroflexi bacterium 44-23])

HSP 1 Score: 323.2 bits (827), Expect = 2.000e-84
Identity = 202/594 (34.01%), Postives = 339/594 (57.07%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLLDVP--LLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDL-RTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAAHA----LDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRLS 691
            IL+  Q  ++  E+ALL  L   LV   + ++D + LK +I Q++DLF++ +VGEFN+GKS FINALLG+  LKEGVTPTT KI  +          RY +   + + +    L+  P  +L+ +++VDTPGTNA+I+ H  +T++ +PR+D+VLF+TS  RP S+SERTFL SI  W KK+V+VLN+ D+ ++ Q++E+V +++R + Q +L    +  +F ISA+ AL+AK + +P           W  S F AL+TY+ S+L    K+  K  NPLGV+  L     + +D R +LL+ D+  +  V+ Q+  + +DM +D E     I+  L    +R + F +E++ LA    L + +     F +QV+ ++   ++E V +M + + ++   Q +AV+D L  R      +MIG      F   R  ++  ++    EV+  Y+   E   ++E  +  V A AA+E GA  +G L+   A     DVTG LV AS +A+LGL +IP RR+    +   ++ +LR Q+E  L     +E+ +   +I   I PY+RFV +E++ + D + E+  +++ +  ++++++
Sbjct:    4 ILSKDQDDVLLRERALLNDLQLALVRFGSSEEDQETLKSSIRQIDDLFLLVIVGEFNSGKSSFINALLGEKLLKEGVTPTTTKINII----------RYKEQPQETVLDAHTLLIYAPHEMLREISIVDTPGTNAIIREHEIITNKFIPRSDLVLFVTSSDRPLSESERTFLQSIRDWGKKLVIVLNKVDMFQSDQELEQVKDFIRENVQALLQIKPE--IFAISARKALQAK-LGQPE---------LWAPSGFQALETYIQSVLDETGKIKLKFLNPLGVSLHLAGRYLELIDSRLHLLNEDVLMIENVDRQLLGYKEDMVKDFEFRMTDIENILFKFEQRGQTFFNENLRLARVPSLLNKKRIQSAFTEQVIADVPQKIEEKVHEMIDWMVEKDFRQWKAVMDHLTTRKITHEDKMIGDPMNASFNYNREYLIETVARKSKEVVEGYDHQVEAAAIAEGAQNAVAAAAAIEVGAIGLGTLITVIATTASADVTGILV-ASVIAVLGLFIIPARRRKANQEMSEKINDLRNQLETSLRTSFLKEIDRSLTKIQTAIEPYTRFVRIEKQNLADNKEEITSLQQNMLDLQNQIN 574          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: WP_026370336.1 (GTP-binding protein [bacterium JKG1])

HSP 1 Score: 322.0 bits (824), Expect = 4.500e-84
Identity = 206/595 (34.62%), Postives = 340/595 (57.14%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSM-EAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDE--VEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCD-LRTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAA----HALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRLS 691
            +L + QA+++++E+ALL +L + L    +    DL  L  AI  +++LF++ V GEFN+GKS FINAL+G+  L EGVTPT         TDR+ +  +Y     Q + E  V E      +L+ + +VDTPGTNAVI+RH +LT   +PR D+VLF+TS  RPF++SER FL  I +W KK+VLV+N+ D L T+ ++E+VV +V  HAQ +LG   +  VFP+SA+LAL AK  A            SWE S F A++ Y+   L  + ++  KL NPLGVA+ +    +  + +R   L  D AT+  +E+Q+  + +D+  +     + I+  L +M  R  +F  E + L    +L  ++     F+++V+G+    +++ V  + + +  R     +AV D+L RR   + GQM+G +  T FE  RA +L  +      V++TY+++ E ++L+  +++ + ATAAV  GA  +GA + A     A D T G++ + ++A  GL ++P +R+  + DF +++ E+R Q+   +  ++  EL     RI E IGPY+RFV  + +++     E+  IE  + R+R  ++
Sbjct:   10 VLGERQATLLEQERALLHRLREALSGFSDTLPADLRALDQAILHLDELFLLVVAGEFNSGKSTFINALIGEPVLPEGVTPT---------TDRINI-LKYGPEPDQQLREEFVLEIHYPAEMLREINIVDTPGTNAVIRRHEELTRDFIPRCDIVLFVTSADRPFTESERAFLEQIREWGKKIVLVINKIDILGTEAEIEQVVRFVGEHAQPLLGRQPE--VFPLSARLALRAKQSADG-----DRSDESWERSRFEAVERYITETLDEQERVRLKLLNPLGVAQTITTRYRSAVGERLESLREDFATIEHIEQQIELYRQDLQNEFRLHVSAIENLLAEMELRGMNFFDETIRLGRMFDLLKAERVRAAFEERVIGDTPQQIEQRVQQIIDWLVDRQFRLWQAVTDYLNRRRSLQRGQMLGEI-GTSFEYNRAALLASVGETARRVVNTYDREAEAEELARGVQSAMAATAAVGVGAXXLGAALMAVLGTLAADFT-GILLSLAVAGTGLFILPAKRRQAKRDFHQKISEMRDQLTRTITRQVNNELETSAARIREAIGPYTRFVRAQRDQLSAIHEELTAIETVLGRLRAEIA 585          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: GAP63536.1 (hypothetical protein ARMA_1959 [Ardenticatena maritima] >KPL89727.1 hypothetical protein SE16_00445 [Ardenticatena maritima])

HSP 1 Score: 320.9 bits (821), Expect = 1.000e-83
Identity = 203/587 (34.58%), Postives = 331/587 (56.39%), Query Frame = 0
Query:  105 LTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTR-YADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVE-EVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVG----ALVAAHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRV 686
            L +  A+++K+E+ LL+ L   L + + P++ +  L +A+  ++D F++ +VGEFN+GKS  INALLG+ Y+ EGVTPTTA I    H  R G+    +   +G  +            L+ + +VDTPGTNAV++ H  ++   VPR+D+VLF+TS  RPF++SER FL +I  W KK+V V+N+ DL  ++D    VVE+VR +A  +LG      +F +SA+ AL+AK    P PP             +AAL+TYL   L+ E ++  KL +PLGVA+R++ E  + L +R+ LL+ DLAT+  VE Q+  + +DM ++ +  +  I   L +M  R E F  E + +A    L ++ A  + F++ V+ +    ++  V D+ + +  R   Q R +   LG R    H +       + FE  RA +L+++     +V++ Y++  E + L E +++ +   A  EAGA  +G    AL+   A D+T GL+ A +L +LGL +IPYRR+  +  FR ++  L+ Q+  VL      E+ +  +R+ E I PY+RFV  E+E ++     + E E E+RR+
Sbjct:    4 LNERYATLLKQERRLLQHLLATLSTWDVPEEHMQRLHEALEHLDDFFLLVIVGEFNSGKSALINALLGERYVTEGVTPTTAHI----HILRYGLQQEPHRTEEGYWV-----VTYPAGFLREIHIVDTPGTNAVLREHEAISRDFVPRSDLVLFVTSADRPFTESERDFLQTIRDWGKKIVFVINKIDLLEEEDARATVVEFVRENASRLLGTTP--TIFAVSARQALKAKQSGAPVPP------------EWAALETYLFETLSAEERVRLKLASPLGVAKRILAETLERLHEREALLAEDLATIEQVETQLRLYRQDMEQEFDYHRLKIQAILNEMQARGETFFDETLRIARIFSLLNASALRQAFERDVIADTPQQIERQVQDLIDWMVDREARQWRVMARLLGERRATEHLEGAAQEAASGFEYNRAHLLDRVGRAAQDVLARYDRSAEARMLVENVQSALAQVALTEAGAIGLGTILTALLTTSAADLT-GLLAAGTLGMLGLGIIPYRRRQAQKAFREKIEHLKVQLVRVLEEAFAHEIERSVKRLNEAIAPYARFVRTEQEHLQQLAATLHEYEAELRRL 566          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: WP_054493358.1 (GTP-binding protein [Ardenticatena maritima])

HSP 1 Score: 320.9 bits (821), Expect = 1.000e-83
Identity = 203/587 (34.58%), Postives = 331/587 (56.39%), Query Frame = 0
Query:  105 LTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTR-YADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVE-EVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVG----ALVAAHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRV 686
            L +  A+++K+E+ LL+ L   L + + P++ +  L +A+  ++D F++ +VGEFN+GKS  INALLG+ Y+ EGVTPTTA I    H  R G+    +   +G  +            L+ + +VDTPGTNAV++ H  ++   VPR+D+VLF+TS  RPF++SER FL +I  W KK+V V+N+ DL  ++D    VVE+VR +A  +LG      +F +SA+ AL+AK    P PP             +AAL+TYL   L+ E ++  KL +PLGVA+R++ E  + L +R+ LL+ DLAT+  VE Q+  + +DM ++ +  +  I   L +M  R E F  E + +A    L ++ A  + F++ V+ +    ++  V D+ + +  R   Q R +   LG R    H +       + FE  RA +L+++     +V++ Y++  E + L E +++ +   A  EAGA  +G    AL+   A D+T GL+ A +L +LGL +IPYRR+  +  FR ++  L+ Q+  VL      E+ +  +R+ E I PY+RFV  E+E ++     + E E E+RR+
Sbjct:   34 LNERYATLLKQERRLLQHLLATLSTWDVPEEHMQRLHEALEHLDDFFLLVIVGEFNSGKSALINALLGERYVTEGVTPTTAHI----HILRYGLQQEPHRTEEGYWV-----VTYPAGFLREIHIVDTPGTNAVLREHEAISRDFVPRSDLVLFVTSADRPFTESERDFLQTIRDWGKKIVFVINKIDLLEEEDARATVVEFVRENASRLLGTTP--TIFAVSARQALKAKQSGAPVPP------------EWAALETYLFETLSAEERVRLKLASPLGVAKRILAETLERLHEREALLAEDLATIEQVETQLRLYRQDMEQEFDYHRLKIQAILNEMQARGETFFDETLRIARIFSLLNASALRQAFERDVIADTPQQIERQVQDLIDWMVDREARQWRVMARLLGERRATEHLEGAAQEAASGFEYNRAHLLDRVGRAAQDVLARYDRSAEARMLVENVQSALAQVALTEAGAIGLGTILTALLTTSAADLT-GLLAAGTLGMLGLGIIPYRRRQAQKAFREKIEHLKVQLVRVLEEAFAHEIERSVKRLNEAIAPYARFVRTEQEHLQQLAATLHEYEAELRRL 596          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: WP_075073907.1 (GTP-binding protein [Longilinea arvoryzae] >GAP14668.1 small GTP-binding protein [Longilinea arvoryzae])

HSP 1 Score: 318.9 bits (816), Expect = 3.800e-83
Identity = 209/588 (35.54%), Postives = 325/588 (55.27%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDL-RTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALV----AAHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVR 687
            IL   Q +I+  E+  L  L   LV   A ++DLD L  +I Q++DLF++ +VGEFN+GKS FINALLG   LKEGVTPTT +I  ++  D+          Q ++ +  +   L + LL  +++VDTPGTNAVI+ H ++T   VPRAD+VLF+TS  RPF++SER FL  I  W KKVVLV+N+ DL +++ ++ +V  +VR +A  +LG   D  +FP+SA+ AL AK       P L      W+ S F  L+TY+ + L   +++  K  +PLGVA  LV++     + ++ LL  D + L  VE Q   + +DM R+     A I+    +M +R +DF  +   LA   +L        +F+ QVV ++   VD  + ++ + +      Q +A+ D+L  R      ++IG     RF   R  +L+ L  +   V+ TY+K  E  K++   +  V  +AAVE GA  +GAL+       A DVT G+V AS +A LGL +IP +R+  +N+   ++ +LR ++   L    E+E+ +   R+ E IGPY+RFV  E  +    + E++    E+  +R
Sbjct:    3 ILAPEQDAILLRERGFLNDLRVKLVDFNATREDLDTLGQSIHQLDDLFLLVIVGEFNSGKSAFINALLGQKLLKEGVTPTTTQINILRFGDK--------SEQSRIEENHQVIFLPIELLSEISIVDTPGTNAVIREHEEITTHFVPRADLVLFITSADRPFTESERHFLQCIRDWGKKVVLVVNKIDLFQSEDELTQVATFVRENAFSLLGMTPD--IFPVSARQALRAKT----GEPQL------WQTSRFEDLETYIQNALDQASQVRLKFSSPLGVAAHLVDKYSAANEVQRQLLEEDRSMLQNVETQQAIYKEDMQRNFAFRMADIENIFFEMEKRGDDFFEDVFRLARVLDLLSKDRIQHQFETQVVADVPQRVDRKINELIDWLVDSDLRQLKAINDYLAERQREYKNRIIGEGAGDRFTYDRNRLLDALGREANRVVETYDKRVESAKMALGAQNAVAVSAAVEVGALGLGALITTLATTMAADVT-GIVAASLVAALGLFIIPAKRRQAKNELHGKLAKLRSELIQSLRAEFEKEIERSLLRMAEAIGPYTRFVRAETNRSDQVQHELKSANLEIASLR 569          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: PKO06141.1 (dynamin [Chloroflexi bacterium HGW-Chloroflexi-3])

HSP 1 Score: 318.5 bits (815), Expect = 5.000e-83
Identity = 198/583 (33.96%), Postives = 328/583 (56.26%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLL--DVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQD-VEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAAHA----LDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIE 680
            IL   Q  ++  E+ LL  L   L+S  A + DL+ L  +I Q++DLF++ +VGEFNAGKS FINALLGD  LKEGVTPTT +I  +          RY +   + I +    ++   +PLLK +++VDTPGTNA++++H ++T + +PR+D+VLF+TS  RP S+SER FL  I  W KK+VLVLN+ DL    D V +V  ++  + + +LG   +  +F +S++LAL+AK    PH          W AS+F  L+T++ + L    ++  K  NP+GV   L +     +  R  LL+ D   +S VE Q++ + +DM +D +   A I+  L  M +R + F  E++ +A   +L   +     F+ +V+  +   ++E + ++ + + +R   Q +AVL+ L +R  A  G+++G    T F+  R  ++  ++     V+  Y++  E   +++  +  V A AA+E GA  +G L+A  A    +DVTG LV AS++A+LGL VIP +R+    +  +++  LR Q+   L  +   E+ +  ERI   I PY+RFV  E++ +     E+ +++
Sbjct:    3 ILRQNQEDLLTLERNLLNDLQMTLLSFGASKADLETLSQSIRQIDDLFLLVIVGEFNAGKSSFINALLGDNLLKEGVTPTTTQINII----------RYQEEHQETITDRNILVIGAPIPLLKEISIVDTPGTNAIVRKHEEITSQFIPRSDLVLFVTSADRPLSESERAFLQQIRDWGKKLVLVLNKVDLLQNDDEVHQVENFITDNMRSLLGIQPN--IFSVSSRLALQAKK-GNPH---------LWHASHFEELETHIQNSLDETERIRLKFLNPIGVGLNLNQRYVNVIQSRLELLNEDWEVISSVERQLSLYKEDMRQDFDFRMADIENILYSMEQRGQIFFEEYLRIARIPDLLKKEKIQNAFKHEVIAEVPQQIEEKIQELIDWMVERDFRQWQAVLEHLDKRKNAHQGKIMGDNLNTSFQYNREHLIESVANRAKRVIDGYDRHIEAANIADGAQNAVAAAAAIEVGAVGLGTLIAVLASSLTVDVTGILV-ASAVAVLGLFVIPAKRRKANLELTKKIKMLREQLVSTLNTQFNHEMDRGLERINAAIAPYTRFVRSEKDSLDQVNEELNQLQ 562          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: PKO10019.1 (dynamin [Chloroflexi bacterium HGW-Chloroflexi-2])

HSP 1 Score: 318.5 bits (815), Expect = 5.000e-83
Identity = 207/597 (34.67%), Postives = 333/597 (55.78%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDE--VEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQD-VEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVA----AHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVRE-------IEKEVRRVR 687
            IL   Q  ++  E+ LL  L   L+S  A + DL+ L  +I Q++DLF++ +VGEFNAGKS FINALLGD  LKEGVTPTT +I  +          RY     +MI E  + E    +PLLK +++VDTPGTNA++++H ++T + +PR+D+VLF+TS  RP S+SER FL  I  W KK+VLVLN+ DL    D V +V +++  +   +LG   +  +F +S++LAL+AK    PH          W AS+F  L+ ++ S L    ++  K  NP+GV   L +     +  R +LL+ D   +S VE Q+  + +DM +D +   A I+  L  M +R + F  E++ +A   +L   +     F+Q+V+  +   ++E + ++ + + +R   Q +AVL+ L +R  A  G++IG    T F+  R  ++  ++     V+  Y+   E   ++E  +  V A AA+E GA  +G L+A    + A DVTG LV AS +A+LGL VIP +R+    +  +++  LR Q+   L  +   E+ +  ERI   I PY+RFV  E++ +     E+ +       +EK+V++++
Sbjct:    3 ILKQNQEDLLTLERNLLNDLQMALLSFGASKADLETLGQSIRQIDDLFLLVIVGEFNAGKSSFINALLGDNLLKEGVTPTTTQINII----------RYHVELQEMISEKNILEIGAPIPLLKEISIVDTPGTNAIMRKHEEITSQFIPRSDLVLFVTSADRPLSESERAFLQQIRDWGKKLVLVLNKVDLLQNDDEVRQVEKFITENIHSLLGIQPE--IFSVSSRLALQAKK-GNPH---------LWHASHFEELEKHIQSSLDETERIRLKFLNPIGVGLNLNQRYANVIQSRLDLLNEDWEVISSVERQLKLYKEDMRQDFDFRMADIENILYSMEKRGQIFFEEYLRIARIPDLLKKEKIQNAFKQEVIDEVPQHIEEKIQELIDWMVERDFRQWQAVLEHLDKRKNAHQGKIIGDNLNTSFQYNREHLIESVANRAKRVVDGYDHHIEAANIAEGAQNAVAAAAAIEVGAVGLGTLIAVLASSLAADVTGILV-ASGVAVLGLFVIPAKRRKANLELTKKIKMLREQLVSTLNTQFNHEIDRSLERINAAIAPYTRFVRSEKDSLDQVNEELNQLQIHLMNLEKQVKQMQ 576          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: WP_006563710.1 (GTP-binding protein [Oscillochloris trichoides] >EFO78983.1 Dynamin family protein [Oscillochloris trichoides DG-6])

HSP 1 Score: 315.1 bits (806), Expect = 5.500e-82
Identity = 192/592 (32.43%), Postives = 336/592 (56.76%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDI--LKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAA----HALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRL 690
            ++TD Q  ++ E + L+ +L        A     D+  L D +  +++LF++ V GEFNAGKS F+NALLG   L EGVTPTT  I  +++ + V    R         + +        +L+ + +VDTPGTNAVI++H QLT   +PRAD+VLF TS  RPF++SER FL  I +W KK+V++LN+ D+ +  ++E+V+ ++R +A+++LG   D  +FP+SA+ AL +++           G   W  S F+A++ Y+   L  E ++  KL +PLGVA+RL  +  Q  +     L  DL T+  +E+QMT + +D+  DV+     ID  LRD+++R + F  EH+ ++  ++L         F+++VVGN++  +D+ +  + + + ++     ++  +++ RR      ++IGSV    F+  R  +L  +     EV+++Y+K+ E + L+++++A V ATA  E GA  +G L+ A      LDVT G++ A+ +A  G  ++P +R+  +   R RVGELR+Q+   +  + ERE+ +   ++ E   P++RFV  +  ++ D +    +I+  + R+R  +
Sbjct:   13 LITDQQEELLNELRGLIMRLRAAFERFGADTDPSDVRTLNDILEHLDELFLIVVAGEFNAGKSSFLNALLGTQVLPEGVTPTTDTITLLQYGEEVASELR--------TNGLRVHTYPADVLRQLNIVDTPGTNAVIRQHEQLTREFIPRADIVLFATSADRPFTESERNFLALIKEWGKKIVIILNKIDILSPPELEQVLHFIRENARDLLGITPD--IFPVSAREALRSRSTGGEE------GEALWANSRFSAVEEYVVDHLDEETRVRLKLLSPLGVAQRLSSKYLQATEGLLETLREDLVTIENIEQQMTLYREDLKNDVQYYLNEIDVILRDLVDRGDYFFEEHIRISRLRDLMRGDLLRAAFEREVVGNVSEQIDQKMHTLIDWMVEKNLRLQQSNDEYIKRRASQHSNKIIGSV-GGNFDYNRRTMLETVGRAASEVVASYDKEIESQILADDVRASVAATALAEVGAVGLGTLLVALFHTALLDVT-GIMAATLVAAGGFALLPAKRRQAKKALRDRVGELRQQLRSSVMAQFEREVERSINQVHERNAPFTRFVRAQRGQLSDLQQGFADIDAGLERLRKEI 586          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: OGO27963.1 (hypothetical protein A2136_08810 [Chloroflexi bacterium RBG_16_54_11])

HSP 1 Score: 313.9 bits (803), Expect = 1.200e-81
Identity = 199/593 (33.56%), Postives = 331/593 (55.82%), Query Frame = 0
Query:  104 ILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLLDVP--LLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDL-RTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALV----AAHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRL 690
            ILT  Q  ++K+ + LL  +   L+   A  +D + L  +I Q+++LF++ VVGEFN+GKS FINALLG   LKEGVTPTT +I  +K          +   Q + +++     L  P  LL  + +VDTPGTNA+I++H  +T + VPR+D+VLF+TS  RPF++SER FL  +  W KKV++VLN+ DL +T+ ++++VV ++  +A+ +LG   +  +FP+SA+LA+ A+         LG       AS F AL++++   L ++ +L  K  NPLGV   LV +     + R  LL +D   L  VE Q+  + +DM RD     + ID  L +M +R E++  E + L    +L +     K F+Q+V+ ++   ++  V +M + + +    Q +AV++ +  R      ++IG      F   R +++  +      V+ TY++  E + ++E  +A V A AA E GA  +G LV       A D T G++ AS +A+LGL +IP R++  + D R ++  LR+Q+   L  + E E+ +  + I + I PY+RFV  E EK+ D + ++   +  + R++ R+
Sbjct:    3 ILTATQEDLLKDSRNLLNDIRASLIQFGASTEDHETLAHSIRQLDELFLLVVVGEFNSGKSAFINALLGQNLLKEGVTPTTTQINVLK----------FGTTQERTVEDENLHTLTAPIELLAELNIVDTPGTNAIIRQHETITQQFVPRSDLVLFVTSADRPFTESERLFLEKLRDWGKKVIIVLNKVDLFQTRGEMDQVVTFISDNARTLLGITPE--IFPVSARLAMRAR---------LGE-VKLRHASGFDALESFIQDRLDDKGRLVLKFMNPLGVGSHLVNKYLLVTNARLELLKTDFTMLEDVESQLNLYQQDMKRDFNFRMSDIDNVLYEMEQRGEEYFDETLRLPRVLDLLNKARIQKEFEQRVIADVPQRIETKVNEMIDWLVEANLRQWQAVMEHIADRRREHEERIIGDAAGGSFHYDREQLIEGVGRTAQRVVETYDRKLEARSMAEGAQASVAALAATEVGAVGLGTLVTVLATTAAADAT-GIILASVVALLGLFIIPARKRQAKIDLREKIASLRQQLSNSLRTQFEHEIERGMQNINDAIAPYTRFVRSEREKLEDVQSKLTGTKNSLERLKVRV 572          
BLAST of NO02G05770 vs. NCBI_GenBank
Match: PLS83779.1 (dynamin [Actinobacteria bacterium])

HSP 1 Score: 313.9 bits (803), Expect = 1.200e-81
Identity = 213/595 (35.80%), Postives = 333/595 (55.97%), Query Frame = 0
Query:  101 AAPILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCD-LRTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWE----ASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALV----AAHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVR 687
            A  IL +    + + E++LLE +   L    AP +D+ +++  +  +E+LF++ VVGEFNAGKS FINALLG     EGVTPTT +I  +++ +        +    +  + V E+      L+ +A+VDTPGTNA+I+ H +L+   VPR+D+VLF+TS  RPF++SER +L  I  W KK+VLV+N+ D LR  +D E+V  +V    + +LG      +F +SA LA +AKA         GPG+   +    AS FA L+ Y+  LL  E ++  KL++PLGV E LV      +++R  LL  D      VE Q+ A+ +DM RD E   A ++  +  + ER + +L E++ L N +EL   +   +RF+ +VV +   ++DE V ++ + +  R   Q R V+D++ RR  AR+ + I       FE  R ++L  +  +  +V+  Y++D+E  +L+  I+  V  TAA  AGA  +GALV        LDVT GL+  + L   GL V+P RR+  R +F +    LR ++  V+  + E EL +  ER+ E I PY+RFV  E  ++ + RG +  I +EV  +R
Sbjct:   28 AVRILDERWKGLAERERSLLEGVVDFLEGFGAPGEDVGLVRQKLEDLEELFLLVVVGEFNAGKSAFINALLGAEISTEGVTPTTDRITVLRYAE--------SPEDRERREGVLERGYPNDFLREVAIVDTPGTNAIIRHHEELSRSFVPRSDLVLFVTSADRPFTESERGYLELIRDWGKKIVLVVNKVDLLRGDEDREQVRSFVEEGVRSMLGLKP--PIFFVSAYLARKAKA--------SGPGSLESDALLNASGFAELEGYVRGLLDEEGRVRLKLESPLGVVEELVRRYGLAVNERLGLLEDDFRMSENVESQLEAYTEDMRRDFEARLAEMENIVLRLSERGDAWLEENIRLLNVRELIRQEKVQERFKDEVVADTENLIDERVQELIDWMVDRNLKQWRGVVDYVNRRRQARYDEHIIGDVGDNFEYNRNQLLQSVGRNAQDVVRRYDRDRESAELALSIQDAVTRTAASGAGALGIGALVVTLFTTRFLDVT-GLIAVAILGGYGLFVLPNRRRKARAEFAQETEALRVRLVEVVRRQFETELARSVERMREAIAPYTRFVRTEHARMSEARGSLSGITEEVEALR 603          
The following BLAST results are available for this feature:
BLAST of NO02G05770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OJX38081.12.000e-8434.01hypothetical protein BGO78_08595 [Chloroflexi bact... [more]
WP_026370336.14.500e-8434.62GTP-binding protein [bacterium JKG1][more]
GAP63536.11.000e-8334.58hypothetical protein ARMA_1959 [Ardenticatena mari... [more]
WP_054493358.11.000e-8334.58GTP-binding protein [Ardenticatena maritima][more]
WP_075073907.13.800e-8335.54GTP-binding protein [Longilinea arvoryzae] >GAP146... [more]
PKO06141.15.000e-8333.96dynamin [Chloroflexi bacterium HGW-Chloroflexi-3][more]
PKO10019.15.000e-8334.67dynamin [Chloroflexi bacterium HGW-Chloroflexi-2][more]
WP_006563710.15.500e-8232.43GTP-binding protein [Oscillochloris trichoides] >E... [more]
OGO27963.11.200e-8133.56hypothetical protein A2136_08810 [Chloroflexi bact... [more]
PLS83779.11.200e-8135.80dynamin [Actinobacteria bacterium][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007277NSK007277Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05770.2NO02G05770.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G05770.1NO02G05770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627531gene_1167Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100193g6gene557Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05770.2NO02G05770.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G05770.1NO02G05770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05770 ID=NO02G05770|Name=NO02G05770|organism=Nannochloropsis oceanica|type=gene|length=4780bp
CTTTAAACACAGAAACCCAGGGGATCAGACGCGGAGGTAAGCAGGGCAGG
CCGGCTTCCCCAAGCAGCAACAGCAGCGGCAGCAATTATCACCATGCTCC
AAGCTCTGAGACGCGGTGCTGCCGGTGGCAGCAGCAATAGCAGCAGTAGC
ATTAGGTGCGCTTGCCGTGGTCTGGTAAGGGGACGCCAACATGGTCTCCT
CTCCCCCTCGCAGCCCGCCCATCATGAACAGCAACGGCCCCAGGATGCTA
CCTCCCTCCCTCACCTAAGTTTCCACCAGCACCGGCAACGGCATGCCTAC
CGTCTCTTCTCATCTTCTTCCTCTTCCTCCTCTCTGCCGTCCCTCAACCC
CCTCGGGCTCCGACAAACCACCAATAAGACGCCGGTCAGGGATGCTGCCC
CTATTCTAACCGATGCCCAAGCCTCGATCGTCAAGGAGGAACAAGCTCTG
TTGGAAAAATTGCACAAGGTGTTGGTGTCCATGGAGGCCCCGCAGCAGGA
TTTAGACATCCTGAAGGATGCGATTTGTCAGgttggagggagggagggaa
aaagggagggaggaagggagggagggaggagggagggaggagggagggag
ggtacctgtcttccagcgctttggtggcgctgagcatttgtgaatcattg
ctgacttctgtgtaatcctctttttgacaccttccgtctttgcagGTCGA
GGACTTGTTCATGGTGTGTGTGGTGGGCGAGTTTAATGCGGGCAAAAGTC
GGTTCATCAATGCCTTGCTTGGTGATACCTACCTCAAGGAAGgtgagggg
agacgaggaagggacagggggatggggggttggaagggaggttggaattg
accaggcagatgatgattctaaaaaaatattttctcagtcttctcctttg
ttgagagtgtcggcttgtaatacgcaacctcacccccctccttacctcgc
tccctcctctcttgcctccctccctccttccctctccccactccacagGC
GTGACCCCCACCACCGCCAAGATTTGTTTCGTCAAGCACACCGACCGTGT
GGGTGTTCCTACGCGGTATGCCGACGCCCAAGGGCAGATGATCGACGAGG
TGGAGGAGAAGCTGCTGGACGTGCCCTTGTTGAAAAATATGGCGCTTGTC
GACACACCCGGAACGAATGCAGTCATTCAGAGACACTCGCAGgtaaggga
ggcaggaagggaggaatggaggaagggaaggagggaagaggatgtggttg
cttgagaagctggaggtggcagtggttttagtcgtaccgtcttaatggca
ttcacagaggcaatttccagggagggagggaggaggggagggagagctcc
tgtatgtatcgttgtcattgtttgagggacagacgctcacaaaatactca
caacaatatcacaattgaccgtgacaaccccccccccccccgctcccccc
tccctcgttcccctccctcctcagCTCACCCACCGCATTGTGCCCCGGGC
GGACGTGGTCCTCTTTCTGACGTCCATCGCTCGGCCTTTCTCCGACTCGG
AACGGACATTTCTCACGTCCATCGCGCAGTGGCACAAGAAGgtacgggag
ggagggagggagggagggtcgtcgatgagggggagggagggtgggggggt
tatgtaatatcctcgatgagggggaaagtgaaggataaatatagagacgt
gtaaaatcagtgaataaataaataaataaataaatacccagacgatgaaa
aaaacagacatagagacagacaagcaaacaggtggtgttggtcctcgacc
tatgcgactcgaacgaagaagcaggcaaaagacaactgagaattcacaat
tcagttcatacaaatgaatcctttctctccactaccgcctccgtcctccc
agGTGGTATTGGTCCTCAACCAATGCGACTTACGCACGAAGCAAGACGTC
GAAGAGGTGGTTGAATACGTCCGCTCACATGCCCAGGAGGTGCTCGGCGC
TGATGCCGACTTGAAGgtacgcgcttcctccctccctcccttcctccctc
ctcccttcttcttcctcccttccctccgtggcctttccgttggcacgtca
ctcattctccctccttccctccttccctccctccctctcagGTGTTTCCA
ATCTCGGCCAAGCTTGCCCTGGAAGCCAAAGCAGTCGCAAAACCTCATCC
TCCCACTCTAGGCCCAGGCGCCACCTCATGGGAAGCAAGCAACTTCGCAG
CTCTACAGACGTACCTAGgtaccttccctccctccctccctccctccctc
cctccctccctccctccctccctccctcccaccctccctccctccctccc
tccctccgcgcctacattcatccctccctccctccctccctccctccctc
cctcccaccctccctccctccctctctccctctcatcctccctccccccc
tccctccctccctccctccctccctccctccctctcatcctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccgcgcc
tacgttcatccttcccttcccgttaccttcccatgcaccatacagATTCC
CTGCTCACAAACGAGGCCAAGCTGCACGGCAAGCTCCAGAACCCCCTCGG
CGgtgagtgccttccctccctccctccctccctccctccctccctccctc
cctccctccctcccaatccgatggatcgtactcacctccttcctactttc
ccgtcgtcatattcatcccccccctccctccctccctccctccctcctac
cccactagTGGCGGAGCGGCTAGTGGAGGAAGCGCAACAAACTCTCGACA
AGAGGAAAAACCTGCTTTCCTCCGACTTGGCGgtgagtgtatctcctcct
tcctccttccctccctccctccctccctccctccctccctccctcacatt
cctgggatttgaggggccatggaggtctctcactcctctccttctctctc
ttaccccctcccctctccctccctccctcccagACGCTCTCTCTGGTGGA
GGAGCAGATGACGGCCTTCATGAAGGACATGGCAAGGGACGTGGAGCGAG
AGAAGGCGACGATCGACAAGTGCCTGCGAGACATGATTGAGCGGGCCGAG
GACTTTCTATCCGAGCATGTGACCCTGGCCAACTACCAGGAGCTGTGGGA
CTCTCAGgtgttgagggagggcgagagggaggaggaatgagggtagcgct
ggtggtgggtcgatcctttcttcttacctccttttttcctttataccctt
ccccccctcttgctcccccaccttagtagctcaacaagcagtccctcctt
ccctcccccccccctcccttctctccaagGCATTCGCCAAGCGGTTCCAG
CAGCAGGTGGTGGGGAATTTAGCCACCGTCGTGGACGAGATCGTCCTGGA
CATGTCCGAGCTGGTGGCTCAGCGGGCCAGGACACAGgtaaacatacctt
ccctccctccctccctccctccccatctccctacctcttcatcaaccctt
tccccctcctgatttcttcctcccacccaccaaaagtacagtgaatcatc
agaaacacctatctctttaaatcttgcataccgcgcataaatcttcccat
ctttcttcctctcacccgccttcacctcctccagAGTCGGGCCGTGCTGG
ACTTCTTGGGACGGAGGCCCGGGGCGCGGCATGGGCAGATGATAGGAAGC
GTGACAGAGACGCGTTTCGAAGGAGTGAGAGCTGAGgtatacatccctcc
ttcccttccttccctcctcaacttatcctgcgtcttggtctccccctcaa
tgcttttaaacccttctctcactgcagGTGTTGAACAAGCTCTCGGCGGA
CGTGGGGGAAGTGATGAGCACCTACGAAAAGGACAAGgtacaagccctcc
atccctccttccctccctccctccctgccccctaccatctcaccctccct
ccctctccctctttctgcccttccttccccctcattcctcagGAGTTCAA
AAAGCTTTCGGAAGAGATCAAGGCGGGCGTCATGGCTACAGCGGCTGTCG
AGGCTGGAGCTGCCACCGTTGGCGCACTCGTTGCAGCGCATGCATTGGAC
GTAACCGGTATTTGTTTGTCTTTGGTCCGCCTCCTCATTTCCCCCACTTT
TTATCTTACCCCCTTGTGCATGCGTTTGTTGCCTCACTTGCTTTCCTTGA
ATTTGTATTAACTACCGCGTCTGTCGCCCTTTTTTAAAGTCTTTTTCCTG
CTTCAAACCTCCCCTCCCTCCATCCCCGAGAGAGATTCTTGAGCGCCTTT
CCCTTCCGTCTGTCTTGCCGCCGCCAAGACCCCAAAAGCTAATTTCCTTA
TCCGCCTCCTTCCTTCCCGCCGGCCCTCCCCCCTCCTTTCCAGGTGGACT
CGTGACGGCTTCTTCTCTTGCCATTTTGGGACTGGTGGTCATCCCCTACC
GCCGGCAGGTGCAACGAAACGATTTCCGGCGCCGCGTGGGTGAATTGAGA
CGACAGATGGAGGGAGTGCTGGCCGTGAGGATGGAGAGAGAGTTAGGGAA
GGTGAGGGAGAGAATAATGGAGTGCATTGGCCCCTATTCGAGGTTTGTCG
CAGTGGAGGAGGAGAAGATTCGAGACTGGAGGGGAGAGGTGAGGGAGATC
GAGAAGGAGGTCAGAAGAGTTAGAGACCGTTTGTCGTGAGATGGTCTTGG
GGGTGCGAGGGAGGGAGGGAGGGAGGGAGG
back to top

protein sequence of NO02G05770.2

>NO02G05770.2-protein ID=NO02G05770.2-protein|Name=NO02G05770.2|organism=Nannochloropsis oceanica|type=polypeptide|length=627bp
MLQALRRGAAGGSSNSSSSIRCACRGLVRGRQHGLLSPSQPAHHEQQRPQ
DATSLPHLSFHQHRQRHAYRLFSSSSSSSSLPSLNPLGLRQTTNKTPVRD
AAPILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDL
FMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPT
RYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVP
RADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVEE
VVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSW
EASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNL
LSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSE
HVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQ
SRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTY
EKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAAHALDVTGICLSLVR
LLISPTFYLTPLCMRLLPHLLSLNLY*
back to top

protein sequence of NO02G05770.1

>NO02G05770.1-protein ID=NO02G05770.1-protein|Name=NO02G05770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=691bp
MLQALRRGAAGGSSNSSSSIRCACRGLVRGRQHGLLSPSQPAHHEQQRPQ
DATSLPHLSFHQHRQRHAYRLFSSSSSSSSLPSLNPLGLRQTTNKTPVRD
AAPILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDL
FMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPT
RYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVP
RADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVEE
VVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSW
EASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNL
LSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSE
HVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQ
SRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTY
EKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAAHALDVTGGLVTASS
LAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERI
MECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRLS*
back to top
Synonyms
Publications