NO02G05770.1, NO02G05770.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G05770.1
Unique Name	NO02G05770.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2207
Alignment location	chr2:1539537..1544316 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:1539537..1544316 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G05770.1 vs.
Match: EWM30094.1 (dynamin family protein [Nannochloropsis gaditana])

HSP 1 Score: 961.8 bits (2485), Expect = 1.100e-276
Identity = 505/625 (80.80%), Postives = 565/625 (90.40%), Query Frame = 0

Query:   72 FSSSSSS-----SSLPSLNPLGLRQTTNKT--PVRDAAPILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPTRYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVPRADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVEEVVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSWEASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNLLSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSEHVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTYEKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAAHALDVTGGLVTASSLAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERIMECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRL 690
            FSSSS       +S PS     ++  T  T  PVRDA PILTDAQASIVKEEQALLE+LH+VL SMEA Q+DLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGD YLKEGVTPTTAKICFVKH DR G PTRYADAQGQMIDEVEEKLLDVPLL+N+ALVDTPGTNAVIQRHSQLT+RIVPRADVVLFLTSIARPFS+SERTFLTSIAQWHKKVVLVLNQCDLR+++DVEEV EYVR+HA+ VLG +ADLKVFPISAKLALEAK VAKPH PT+GPGA +W+ASNFAALQ YLD+LLT+EAKL  KL NP+GVAERL++EA+ TLD+R+ LLSSD+ATL+LV+EQMTAFM+DM RDVEREK  IDKCLRDM++RAE+FL+ H+TL NYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQM+GSVTETRFEG+RAEVL+KL+ADVGEVM+TY+KDKEF KLSEEIK GVMATAAVEAGAATVGALVA HALDVTGGL+TASSLA+LGLVV+PYRRQ QR +FRRRV  LR+QM+G LAVR++RELGKVR RI++CIGPYSRFV+VEE KI++   E+  I+KE+ ++R RL
Sbjct:   84 FSSSSRPPPPPPTSSPSRRSSSVKPVTQSTKAPVRDATPILTDAQASIVKEEQALLERLHRVLTSMEAGQEDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDKYLKEGVTPTTAKICFVKHVDRAGAPTRYADAQGQMIDEVEEKLLDVPLLQNLALVDTPGTNAVIQRHSQLTYRIVPRADVVLFLTSIARPFSESERTFLTSIAQWHKKVVLVLNQCDLRSREDVEEVTEYVRAHARAVLGTEADLKVFPISAKLALEAKVVAKPHSPTVGPGALAWQASNFAALQQYLDTLLTDEAKLQSKLLNPIGVAERLLDEARHTLDERRKLLSSDVATLALVDEQMTAFMRDMERDVEREKGMIDKCLRDMVDRAEEFLAAHMTLTNYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMVGSVTETRFEGIRAEVLSKLTADVGEVMNTYDKDKEFVKLSEEIKTGVMATAAVEAGAATVGALVATHALDVTGGLITASSLALLGLVVLPYRRQAQRAEFRRRVKALRQQMDGTLAVRLDRELGKVRGRILDCIGPYSRFVSVEENKIQELGMEMEVIDKEINKLRTRL 708

The following BLAST results are available for this feature:

BLAST of NO02G05770.1 vs.

BLAST of NO02G05770.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30094.1	1.100e-276	80.80	dynamin family protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G05770	NO02G05770	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G05770.1	NO02G05770.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G05770.1.cds1	NO02G05770.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds2	NO02G05770.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds3	NO02G05770.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds4	NO02G05770.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds5	NO02G05770.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds6	NO02G05770.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds7	NO02G05770.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds8	NO02G05770.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds9	NO02G05770.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds10	NO02G05770.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds11	NO02G05770.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds12	NO02G05770.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds13	NO02G05770.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G05770.1.cds14	NO02G05770.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:1539537..1544316-
coding sequence from alignment at chr2:1539537..1544316-

mRNA sequence

>NO02G05770.1 ID=NO02G05770.1|Name=NO02G05770.1|organism=Nannochloropsis oceanica|type=mRNA|length=2207bp
CTTTAAACACAGAAACCCAGGGGATCAGACGCGGAGGTAAGCAGGGCAGG
CCGGCTTCCCCAAGCAGCAACAGCAGCGGCAGCAATTATCACCATGCTCC
AAGCTCTGAGACGCGGTGCTGCCGGTGGCAGCAGCAATAGCAGCAGTAGC
ATTAGGTGCGCTTGCCGTGGTCTGGTAAGGGGACGCCAACATGGTCTCCT
CTCCCCCTCGCAGCCCGCCCATCATGAACAGCAACGGCCCCAGGATGCTA
CCTCCCTCCCTCACCTAAGTTTCCACCAGCACCGGCAACGGCATGCCTAC
CGTCTCTTCTCATCTTCTTCCTCTTCCTCCTCTCTGCCGTCCCTCAACCC
CCTCGGGCTCCGACAAACCACCAATAAGACGCCGGTCAGGGATGCTGCCC
CTATTCTAACCGATGCCCAAGCCTCGATCGTCAAGGAGGAACAAGCTCTG
TTGGAAAAATTGCACAAGGTGTTGGTGTCCATGGAGGCCCCGCAGCAGGA
TTTAGACATCCTGAAGGATGCGATTTGTCAGGTCGAGGACTTGTTCATGG
TGTGTGTGGTGGGCGAGTTTAATGCGGGCAAAAGTCGGTTCATCAATGCC
TTGCTTGGTGATACCTACCTCAAGGAAGGCGTGACCCCCACCACCGCCAA
GATTTGTTTCGTCAAGCACACCGACCGTGTGGGTGTTCCTACGCGGTATG
CCGACGCCCAAGGGCAGATGATCGACGAGGTGGAGGAGAAGCTGCTGGAC
GTGCCCTTGTTGAAAAATATGGCGCTTGTCGACACACCCGGAACGAATGC
AGTCATTCAGAGACACTCGCAGCTCACCCACCGCATTGTGCCCCGGGCGG
ACGTGGTCCTCTTTCTGACGTCCATCGCTCGGCCTTTCTCCGACTCGGAA
CGGACATTTCTCACGTCCATCGCGCAGTGGCACAAGAAGGTGGTATTGGT
CCTCAACCAATGCGACTTACGCACGAAGCAAGACGTCGAAGAGGTGGTTG
AATACGTCCGCTCACATGCCCAGGAGGTGCTCGGCGCTGATGCCGACTTG
AAGGTGTTTCCAATCTCGGCCAAGCTTGCCCTGGAAGCCAAAGCAGTCGC
AAAACCTCATCCTCCCACTCTAGGCCCAGGCGCCACCTCATGGGAAGCAA
GCAACTTCGCAGCTCTACAGACGTACCTAGATTCCCTGCTCACAAACGAG
GCCAAGCTGCACGGCAAGCTCCAGAACCCCCTCGGCGTGGCGGAGCGGCT
AGTGGAGGAAGCGCAACAAACTCTCGACAAGAGGAAAAACCTGCTTTCCT
CCGACTTGGCGACGCTCTCTCTGGTGGAGGAGCAGATGACGGCCTTCATG
AAGGACATGGCAAGGGACGTGGAGCGAGAGAAGGCGACGATCGACAAGTG
CCTGCGAGACATGATTGAGCGGGCCGAGGACTTTCTATCCGAGCATGTGA
CCCTGGCCAACTACCAGGAGCTGTGGGACTCTCAGGCATTCGCCAAGCGG
TTCCAGCAGCAGGTGGTGGGGAATTTAGCCACCGTCGTGGACGAGATCGT
CCTGGACATGTCCGAGCTGGTGGCTCAGCGGGCCAGGACACAGAGTCGGG
CCGTGCTGGACTTCTTGGGACGGAGGCCCGGGGCGCGGCATGGGCAGATG
ATAGGAAGCGTGACAGAGACGCGTTTCGAAGGAGTGAGAGCTGAGGTGTT
GAACAAGCTCTCGGCGGACGTGGGGGAAGTGATGAGCACCTACGAAAAGG
ACAAGGAGTTCAAAAAGCTTTCGGAAGAGATCAAGGCGGGCGTCATGGCT
ACAGCGGCTGTCGAGGCTGGAGCTGCCACCGTTGGCGCACTCGTTGCAGC
GCATGCATTGGACGTAACCGGTGGACTCGTGACGGCTTCTTCTCTTGCCA
TTTTGGGACTGGTGGTCATCCCCTACCGCCGGCAGGTGCAACGAAACGAT
TTCCGGCGCCGCGTGGGTGAATTGAGACGACAGATGGAGGGAGTGCTGGC
CGTGAGGATGGAGAGAGAGTTAGGGAAGGTGAGGGAGAGAATAATGGAGT
GCATTGGCCCCTATTCGAGGTTTGTCGCAGTGGAGGAGGAGAAGATTCGA
GACTGGAGGGGAGAGGTGAGGGAGATCGAGAAGGAGGTCAGAAGAGTTAG
AGACCGTTTGTCGTGAGATGGTCTTGGGGGTGCGAGGGAGGGAGGGAGGG
AGGGAGG

protein sequence of NO02G05770.1

>NO02G05770.1-protein ID=NO02G05770.1-protein|Name=NO02G05770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=691bp
MLQALRRGAAGGSSNSSSSIRCACRGLVRGRQHGLLSPSQPAHHEQQRPQ
DATSLPHLSFHQHRQRHAYRLFSSSSSSSSLPSLNPLGLRQTTNKTPVRD
AAPILTDAQASIVKEEQALLEKLHKVLVSMEAPQQDLDILKDAICQVEDL
FMVCVVGEFNAGKSRFINALLGDTYLKEGVTPTTAKICFVKHTDRVGVPT
RYADAQGQMIDEVEEKLLDVPLLKNMALVDTPGTNAVIQRHSQLTHRIVP
RADVVLFLTSIARPFSDSERTFLTSIAQWHKKVVLVLNQCDLRTKQDVEE
VVEYVRSHAQEVLGADADLKVFPISAKLALEAKAVAKPHPPTLGPGATSW
EASNFAALQTYLDSLLTNEAKLHGKLQNPLGVAERLVEEAQQTLDKRKNL
LSSDLATLSLVEEQMTAFMKDMARDVEREKATIDKCLRDMIERAEDFLSE
HVTLANYQELWDSQAFAKRFQQQVVGNLATVVDEIVLDMSELVAQRARTQ
SRAVLDFLGRRPGARHGQMIGSVTETRFEGVRAEVLNKLSADVGEVMSTY
EKDKEFKKLSEEIKAGVMATAAVEAGAATVGALVAAHALDVTGGLVTASS
LAILGLVVIPYRRQVQRNDFRRRVGELRRQMEGVLAVRMERELGKVRERI
MECIGPYSRFVAVEEEKIRDWRGEVREIEKEVRRVRDRLS*

mRNA from alignment at chr2:1539537..1544316-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G05770.1 ID=NO02G05770.1|Name=NO02G05770.1|organism=Nannochloropsis oceanica|type=mRNA|length=4780bp|location=Sequence derived from alignment at chr2:1539537..1544316- (Nannochloropsis oceanica)
CTTTAAACACAGAAACCCAGGGGATCAGACGCGGAGGTAAGCAGGGCAGG
CCGGCTTCCCCAAGCAGCAACAGCAGCGGCAGCAATTATCACCATGCTCC
AAGCTCTGAGACGCGGTGCTGCCGGTGGCAGCAGCAATAGCAGCAGTAGC
ATTAGGTGCGCTTGCCGTGGTCTGGTAAGGGGACGCCAACATGGTCTCCT
CTCCCCCTCGCAGCCCGCCCATCATGAACAGCAACGGCCCCAGGATGCTA
CCTCCCTCCCTCACCTAAGTTTCCACCAGCACCGGCAACGGCATGCCTAC
CGTCTCTTCTCATCTTCTTCCTCTTCCTCCTCTCTGCCGTCCCTCAACCC
CCTCGGGCTCCGACAAACCACCAATAAGACGCCGGTCAGGGATGCTGCCC
CTATTCTAACCGATGCCCAAGCCTCGATCGTCAAGGAGGAACAAGCTCTG
TTGGAAAAATTGCACAAGGTGTTGGTGTCCATGGAGGCCCCGCAGCAGGA
TTTAGACATCCTGAAGGATGCGATTTGTCAGGTTGGAGGGAGGGAGGGAA
AAAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGGAGGGAGGAGGGAGGGAG
GGTACCTGTCTTCCAGCGCTTTGGTGGCGCTGAGCATTTGTGAATCATTG
CTGACTTCTGTGTAATCCTCTTTTTGACACCTTCCGTCTTTGCAGGTCGA
GGACTTGTTCATGGTGTGTGTGGTGGGCGAGTTTAATGCGGGCAAAAGTC
GGTTCATCAATGCCTTGCTTGGTGATACCTACCTCAAGGAAGGTGAGGGG
AGACGAGGAAGGGACAGGGGGATGGGGGGTTGGAAGGGAGGTTGGAATTG
ACCAGGCAGATGATGATTCTAAAAAAATATTTTCTCAGTCTTCTCCTTTG
TTGAGAGTGTCGGCTTGTAATACGCAACCTCACCCCCCTCCTTACCTCGC
TCCCTCCTCTCTTGCCTCCCTCCCTCCTTCCCTCTCCCCACTCCACAGGC
GTGACCCCCACCACCGCCAAGATTTGTTTCGTCAAGCACACCGACCGTGT
GGGTGTTCCTACGCGGTATGCCGACGCCCAAGGGCAGATGATCGACGAGG
TGGAGGAGAAGCTGCTGGACGTGCCCTTGTTGAAAAATATGGCGCTTGTC
GACACACCCGGAACGAATGCAGTCATTCAGAGACACTCGCAGGTAAGGGA
GGCAGGAAGGGAGGAATGGAGGAAGGGAAGGAGGGAAGAGGATGTGGTTG
CTTGAGAAGCTGGAGGTGGCAGTGGTTTTAGTCGTACCGTCTTAATGGCA
TTCACAGAGGCAATTTCCAGGGAGGGAGGGAGGAGGGGAGGGAGAGCTCC
TGTATGTATCGTTGTCATTGTTTGAGGGACAGACGCTCACAAAATACTCA
CAACAATATCACAATTGACCGTGACAACCCCCCCCCCCCCCGCTCCCCCC
TCCCTCGTTCCCCTCCCTCCTCAGCTCACCCACCGCATTGTGCCCCGGGC
GGACGTGGTCCTCTTTCTGACGTCCATCGCTCGGCCTTTCTCCGACTCGG
AACGGACATTTCTCACGTCCATCGCGCAGTGGCACAAGAAGGTACGGGAG
GGAGGGAGGGAGGGAGGGTCGTCGATGAGGGGGAGGGAGGGTGGGGGGGT
TATGTAATATCCTCGATGAGGGGGAAAGTGAAGGATAAATATAGAGACGT
GTAAAATCAGTGAATAAATAAATAAATAAATAAATACCCAGACGATGAAA
AAAACAGACATAGAGACAGACAAGCAAACAGGTGGTGTTGGTCCTCGACC
TATGCGACTCGAACGAAGAAGCAGGCAAAAGACAACTGAGAATTCACAAT
TCAGTTCATACAAATGAATCCTTTCTCTCCACTACCGCCTCCGTCCTCCC
AGGTGGTATTGGTCCTCAACCAATGCGACTTACGCACGAAGCAAGACGTC
GAAGAGGTGGTTGAATACGTCCGCTCACATGCCCAGGAGGTGCTCGGCGC
TGATGCCGACTTGAAGGTACGCGCTTCCTCCCTCCCTCCCTTCCTCCCTC
CTCCCTTCTTCTTCCTCCCTTCCCTCCGTGGCCTTTCCGTTGGCACGTCA
CTCATTCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCTCAGGTGTTTCCA
ATCTCGGCCAAGCTTGCCCTGGAAGCCAAAGCAGTCGCAAAACCTCATCC
TCCCACTCTAGGCCCAGGCGCCACCTCATGGGAAGCAAGCAACTTCGCAG
CTCTACAGACGTACCTAGGTACCTTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACCCTCCCTCCCTCCCTCCC
TCCCTCCGCGCCTACATTCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCACCCTCCCTCCCTCCCTCTCTCCCTCTCATCCTCCCTCCCCCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCATCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCGCC
TACGTTCATCCTTCCCTTCCCGTTACCTTCCCATGCACCATACAGATTCC
CTGCTCACAAACGAGGCCAAGCTGCACGGCAAGCTCCAGAACCCCCTCGG
CGGTGAGTGCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCAATCCGATGGATCGTACTCACCTCCTTCCTACTTTC
CCGTCGTCATATTCATCCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCTAC
CCCACTAGTGGCGGAGCGGCTAGTGGAGGAAGCGCAACAAACTCTCGACA
AGAGGAAAAACCTGCTTTCCTCCGACTTGGCGGTGAGTGTATCTCCTCCT
TCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCACATT
CCTGGGATTTGAGGGGCCATGGAGGTCTCTCACTCCTCTCCTTCTCTCTC
TTACCCCCTCCCCTCTCCCTCCCTCCCTCCCAGACGCTCTCTCTGGTGGA
GGAGCAGATGACGGCCTTCATGAAGGACATGGCAAGGGACGTGGAGCGAG
AGAAGGCGACGATCGACAAGTGCCTGCGAGACATGATTGAGCGGGCCGAG
GACTTTCTATCCGAGCATGTGACCCTGGCCAACTACCAGGAGCTGTGGGA
CTCTCAGGTGTTGAGGGAGGGCGAGAGGGAGGAGGAATGAGGGTAGCGCT
GGTGGTGGGTCGATCCTTTCTTCTTACCTCCTTTTTTCCTTTATACCCTT
CCCCCCCTCTTGCTCCCCCACCTTAGTAGCTCAACAAGCAGTCCCTCCTT
CCCTCCCCCCCCCCTCCCTTCTCTCCAAGGCATTCGCCAAGCGGTTCCAG
CAGCAGGTGGTGGGGAATTTAGCCACCGTCGTGGACGAGATCGTCCTGGA
CATGTCCGAGCTGGTGGCTCAGCGGGCCAGGACACAGGTAAACATACCTT
CCCTCCCTCCCTCCCTCCCTCCCCATCTCCCTACCTCTTCATCAACCCTT
TCCCCCTCCTGATTTCTTCCTCCCACCCACCAAAAGTACAGTGAATCATC
AGAAACACCTATCTCTTTAAATCTTGCATACCGCGCATAAATCTTCCCAT
CTTTCTTCCTCTCACCCGCCTTCACCTCCTCCAGAGTCGGGCCGTGCTGG
ACTTCTTGGGACGGAGGCCCGGGGCGCGGCATGGGCAGATGATAGGAAGC
GTGACAGAGACGCGTTTCGAAGGAGTGAGAGCTGAGGTATACATCCCTCC
TTCCCTTCCTTCCCTCCTCAACTTATCCTGCGTCTTGGTCTCCCCCTCAA
TGCTTTTAAACCCTTCTCTCACTGCAGGTGTTGAACAAGCTCTCGGCGGA
CGTGGGGGAAGTGATGAGCACCTACGAAAAGGACAAGGTACAAGCCCTCC
ATCCCTCCTTCCCTCCCTCCCTCCCTGCCCCCTACCATCTCACCCTCCCT
CCCTCTCCCTCTTTCTGCCCTTCCTTCCCCCTCATTCCTCAGGAGTTCAA
AAAGCTTTCGGAAGAGATCAAGGCGGGCGTCATGGCTACAGCGGCTGTCG
AGGCTGGAGCTGCCACCGTTGGCGCACTCGTTGCAGCGCATGCATTGGAC
GTAACCGGTATTTGTTTGTCTTTGGTCCGCCTCCTCATTTCCCCCACTTT
TTATCTTACCCCCTTGTGCATGCGTTTGTTGCCTCACTTGCTTTCCTTGA
ATTTGTATTAACTACCGCGTCTGTCGCCCTTTTTTAAAGTCTTTTTCCTG
CTTCAAACCTCCCCTCCCTCCATCCCCGAGAGAGATTCTTGAGCGCCTTT
CCCTTCCGTCTGTCTTGCCGCCGCCAAGACCCCAAAAGCTAATTTCCTTA
TCCGCCTCCTTCCTTCCCGCCGGCCCTCCCCCCTCCTTTCCAGGTGGACT
CGTGACGGCTTCTTCTCTTGCCATTTTGGGACTGGTGGTCATCCCCTACC
GCCGGCAGGTGCAACGAAACGATTTCCGGCGCCGCGTGGGTGAATTGAGA
CGACAGATGGAGGGAGTGCTGGCCGTGAGGATGGAGAGAGAGTTAGGGAA
GGTGAGGGAGAGAATAATGGAGTGCATTGGCCCCTATTCGAGGTTTGTCG
CAGTGGAGGAGGAGAAGATTCGAGACTGGAGGGGAGAGGTGAGGGAGATC
GAGAAGGAGGTCAGAAGAGTTAGAGACCGTTTGTCGTGAGATGGTCTTGG
GGGTGCGAGGGAGGGAGGGAGGGAGGGAGG

Coding sequence (CDS) from alignment at chr2:1539537..1544316-

>NO02G05770.1 ID=NO02G05770.1|Name=NO02G05770.1|organism=Nannochloropsis oceanica|type=CDS|length=2073bp|location=Sequence derived from alignment at chr2:1539537..1544316- (Nannochloropsis oceanica)
ATGCTCCAAGCTCTGAGACGCGGTGCTGCCGGTGGCAGCAGCAATAGCAG
CAGTAGCATTAGGTGCGCTTGCCGTGGTCTGGTAAGGGGACGCCAACATG
GTCTCCTCTCCCCCTCGCAGCCCGCCCATCATGAACAGCAACGGCCCCAG
GATGCTACCTCCCTCCCTCACCTAAGTTTCCACCAGCACCGGCAACGGCA
TGCCTACCGTCTCTTCTCATCTTCTTCCTCTTCCTCCTCTCTGCCGTCCC
TCAACCCCCTCGGGCTCCGACAAACCACCAATAAGACGCCGGTCAGGGAT
GCTGCCCCTATTCTAACCGATGCCCAAGCCTCGATCGTCAAGGAGGAACA
AGCTCTGTTGGAAAAATTGCACAAGGTGTTGGTGTCCATGGAGGCCCCGC
AGCAGGATTTAGACATCCTGAAGGATGCGATTTGTCAGGTCGAGGACTTG
TTCATGGTGTGTGTGGTGGGCGAGTTTAATGCGGGCAAAAGTCGGTTCAT
CAATGCCTTGCTTGGTGATACCTACCTCAAGGAAGGCGTGACCCCCACCA
CCGCCAAGATTTGTTTCGTCAAGCACACCGACCGTGTGGGTGTTCCTACG
CGGTATGCCGACGCCCAAGGGCAGATGATCGACGAGGTGGAGGAGAAGCT
GCTGGACGTGCCCTTGTTGAAAAATATGGCGCTTGTCGACACACCCGGAA
CGAATGCAGTCATTCAGAGACACTCGCAGCTCACCCACCGCATTGTGCCC
CGGGCGGACGTGGTCCTCTTTCTGACGTCCATCGCTCGGCCTTTCTCCGA
CTCGGAACGGACATTTCTCACGTCCATCGCGCAGTGGCACAAGAAGGTGG
TATTGGTCCTCAACCAATGCGACTTACGCACGAAGCAAGACGTCGAAGAG
GTGGTTGAATACGTCCGCTCACATGCCCAGGAGGTGCTCGGCGCTGATGC
CGACTTGAAGGTGTTTCCAATCTCGGCCAAGCTTGCCCTGGAAGCCAAAG
CAGTCGCAAAACCTCATCCTCCCACTCTAGGCCCAGGCGCCACCTCATGG
GAAGCAAGCAACTTCGCAGCTCTACAGACGTACCTAGATTCCCTGCTCAC
AAACGAGGCCAAGCTGCACGGCAAGCTCCAGAACCCCCTCGGCGTGGCGG
AGCGGCTAGTGGAGGAAGCGCAACAAACTCTCGACAAGAGGAAAAACCTG
CTTTCCTCCGACTTGGCGACGCTCTCTCTGGTGGAGGAGCAGATGACGGC
CTTCATGAAGGACATGGCAAGGGACGTGGAGCGAGAGAAGGCGACGATCG
ACAAGTGCCTGCGAGACATGATTGAGCGGGCCGAGGACTTTCTATCCGAG
CATGTGACCCTGGCCAACTACCAGGAGCTGTGGGACTCTCAGGCATTCGC
CAAGCGGTTCCAGCAGCAGGTGGTGGGGAATTTAGCCACCGTCGTGGACG
AGATCGTCCTGGACATGTCCGAGCTGGTGGCTCAGCGGGCCAGGACACAG
AGTCGGGCCGTGCTGGACTTCTTGGGACGGAGGCCCGGGGCGCGGCATGG
GCAGATGATAGGAAGCGTGACAGAGACGCGTTTCGAAGGAGTGAGAGCTG
AGGTGTTGAACAAGCTCTCGGCGGACGTGGGGGAAGTGATGAGCACCTAC
GAAAAGGACAAGGAGTTCAAAAAGCTTTCGGAAGAGATCAAGGCGGGCGT
CATGGCTACAGCGGCTGTCGAGGCTGGAGCTGCCACCGTTGGCGCACTCG
TTGCAGCGCATGCATTGGACGTAACCGGTGGACTCGTGACGGCTTCTTCT
CTTGCCATTTTGGGACTGGTGGTCATCCCCTACCGCCGGCAGGTGCAACG
AAACGATTTCCGGCGCCGCGTGGGTGAATTGAGACGACAGATGGAGGGAG
TGCTGGCCGTGAGGATGGAGAGAGAGTTAGGGAAGGTGAGGGAGAGAATA
ATGGAGTGCATTGGCCCCTATTCGAGGTTTGTCGCAGTGGAGGAGGAGAA
GATTCGAGACTGGAGGGGAGAGGTGAGGGAGATCGAGAAGGAGGTCAGAA
GAGTTAGAGACCGTTTGTCGTGA

Synonyms

Publications