Naga_100193g6, gene557 (gene) Nannochloropsis gaditana

Overview
NameNaga_100193g6
Unique Namegene557
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1441049..1446208 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100193g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1441049..1446208 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL001ngnoL001Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05770NO02G05770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna580rna580-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna579rna579-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna580rna580Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna579rna579Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna580

>rna580-protein ID=rna580-protein|Name=rna580|organism=Nannochloropsis gaditana|type=polypeptide|length=668bp
MLLGLRKTALNSRDSIPRRSWRKYGSYACRHLFCGTTLQAVRWREASSTL
GHAHHNIASHRRTHHFPSYDDGFSCPVSVRFCPFSSSSRPPPPPPTSSPS
RRSSSVKPVTQSTKAPVRDATPILTDAQASIVKEEQALLERLHRVLTSME
AGQEDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDKYLKEGVT
PTTAKICFVKHVDRAGAPTRYADAQGQMIDEVEEKLLDVPLLQNLALVDT
PGTNAVIQRHSQLTYRIVPRADVVLFLTSIARPFSESERTFLTSIAQWHK
KVVLVLNQCDLRSREDVEEVTEYVRAHARAVLGTEADLKVFPISAKLALE
AKVVAKPHSPTVGPGALAWQASNFAALQQYLDTLLTDEAKLQSKLLNPIG
VAERLLDEARHTLDERRKLLSSDVATLALVDEQMTAFMRDMERDVEREKG
MIDKCLRDMVDRAEEFLAAHMTLTNYQELWDSQAFAKRFQQQVVGNLATV
VDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMVGSVTETRFEGI
RAEVLSKLTADVGEVMNTYDKDKEFVKLSEEIKTGVMATAAVEAGAATVG
ALVATHALDVTGILFSSMKNSLLLLKHFQFLPFYLFLVALFIPCCHSWHC
NPTMEGSSLPPVLLYWAW
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protein sequence of rna579

>rna579-protein ID=rna579-protein|Name=rna579|organism=Nannochloropsis gaditana|type=polypeptide|length=709bp
MLLGLRKTALNSRDSIPRRSWRKYGSYACRHLFCGTTLQAVRWREASSTL
GHAHHNIASHRRTHHFPSYDDGFSCPVSVRFCPFSSSSRPPPPPPTSSPS
RRSSSVKPVTQSTKAPVRDATPILTDAQASIVKEEQALLERLHRVLTSME
AGQEDLDILKDAICQVEDLFMVCVVGEFNAGKSRFINALLGDKYLKEGVT
PTTAKICFVKHVDRAGAPTRYADAQGQMIDEVEEKLLDVPLLQNLALVDT
PGTNAVIQRHSQLTYRIVPRADVVLFLTSIARPFSESERTFLTSIAQWHK
KVVLVLNQCDLRSREDVEEVTEYVRAHARAVLGTEADLKVFPISAKLALE
AKVVAKPHSPTVGPGALAWQASNFAALQQYLDTLLTDEAKLQSKLLNPIG
VAERLLDEARHTLDERRKLLSSDVATLALVDEQMTAFMRDMERDVEREKG
MIDKCLRDMVDRAEEFLAAHMTLTNYQELWDSQAFAKRFQQQVVGNLATV
VDEIVLDMSELVAQRARTQSRAVLDFLGRRPGARHGQMVGSVTETRFEGI
RAEVLSKLTADVGEVMNTYDKDKEFVKLSEEIKTGVMATAAVEAGAATVG
ALVATHALDVTGGLITASSLALLGLVVLPYRRQAQRAEFRRRVKALRQQM
DGTLAVRLDRELGKVRGRILDCIGPYSRFVSVEENKIQELGMEMEVIDKE
INKLRTRLV
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Synonyms
Publications