NO02G05710, NO02G05710 (gene) Nannochloropsis oceanica

Overview
NameNO02G05710
Unique NameNO02G05710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2640
Alignment locationchr2:1517780..1520419 +

Link to JBrowse

Properties
Property NameValue
DescriptionUdp-galactose transporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1517780..1520419 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR013657UAA
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO02G05710 vs. NCBI_GenBank
Match: EWM30103.1 (udp-galactose transporter [Nannochloropsis gaditana])

HSP 1 Score: 496.9 bits (1278), Expect = 6.000e-137
Identity = 269/372 (72.31%), Postives = 306/372 (82.26%), Query Frame = 0
Query:    1 MRREPHQ--LSNSFDTIHKPTLHEREMEKGRGGN-DGNSSTLETERMMLLRQSTPAQPDTPKKLFSFLTHVTLTIEALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMK 370
            MRR+ H    S     +H    HEREMEKGR    D  S + E E+M LL +     PDTPKK  +    +  T++ LPR+ KFCLLV+GLFFFFG+HNLLQE+IMHFPGFTFGW+LGFLEVLGVT FSYWER+W  E GVRR S R+Y+ TTLCL+GSSSL+NKALDYINYPTKVVFRSCKLIPTMVI+ VMN+K F G+EY AA+AVC+GLI FAFADV+VAP+FSPWGITLVSLSVVCDA+LPNLQ RLF  GSSRLEVTFYSNI+TL LMS STLLSGDLLGALAYA+++  AAV L++YTLLAY+AISLHM +V+SFGSVAAVLVGNSRKTMTICLSFLLFPKPFS LYV GGMLVL GLT S Y+K
Sbjct:    1 MRRDLHTPIASKKVQQMHS---HEREMEKGRILRIDEASGSSEAEKMNLLGELPIDDPDTPKKTSAPTMSLLSTLDTLPRIWKFCLLVVGLFFFFGVHNLLQEQIMHFPGFTFGWSLGFLEVLGVTVFSYWERRWYKEAGVRRGSWRSYVGTTLCLMGSSSLANKALDYINYPTKVVFRSCKLIPTMVISSVMNQKPFKGVEYAAAVAVCVGLILFAFADVRVAPSFSPWGITLVSLSVVCDAVLPNLQERLFAEGSSRLEVTFYSNILTLGLMSVSTLLSGDLLGALAYAQADHKAAVLLLVYTLLAYVAISLHMALVKSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSNLYVVGGMLVLAGLTVSVYVK 369          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: XP_005855633.1 (solute carrier family member b3 [Nannochloropsis gaditana CCMP526] >EKU20722.1 solute carrier family member b3 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 321.2 bits (822), Expect = 4.500e-84
Identity = 170/207 (82.13%), Postives = 188/207 (90.82%), Query Frame = 0
Query:  163 ALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMK 370
            ALDYINYPTKVVFRSCKLIPTMVI+ VMN+K F G+EY AA+AVC+GLI FAFADV+VAP+FSPWGITLVSLSVVCDA+LPNLQ RLF  GSSRLEVTFYSNI+TL LMS STLLSGDLLGALAYA+++  AAV L++YTLLAY+AISLHM +V+SFGSVAAVLVGNSRKTMTICLSFLLFPKPFS LYV GGMLVL GLT S Y+K
Sbjct:   49 ALDYINYPTKVVFRSCKLIPTMVISSVMNQKPFKGVEYAAAVAVCVGLILFAFADVRVAPSFSPWGITLVSLSVVCDAVLPNLQERLFAEGSSRLEVTFYSNILTLGLMSVSTLLSGDLLGALAYAQADHKAAVLLLVYTLLAYVAISLHMALVKSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSNLYVVGGMLVLAGLTVSVYVK 255          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: OEU17103.1 (UAA transporter, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 319.3 bits (817), Expect = 1.700e-83
Identity = 170/299 (56.86%), Postives = 215/299 (71.91%), Query Frame = 0
Query:   73 EALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMKAR 372
            E L    +F LLV G+FFFFG+HN LQE IM  PGF FG  LG+LEVLGVT  S+ ER+   +   R A L AY   T CLL SSSLSN AL+YIN+PTKVVFRSCKLIPTM++A +++KK F+ +EY  A  +C GL+ FA AD  + P+F P G+  VSLSV  DA+LPN Q RLF  GSSRLEVTFY+NI TL++M+F+T LSGDL+G + +AR++     Y+ +YT +AY+AIS+HM +V+ FG V+AVLV   RK MT+ LSFLLFPK FS  YV G ++VLG L  S+ +K R
Sbjct:    2 EKLSSPIQFSLLVCGVFFFFGIHNYLQEAIMSIPGFRFGVMLGYLEVLGVTVCSFLERRCIAQETQRIAPLSAYPLLTFCLLSSSSLSNLALNYINFPTKVVFRSCKLIPTMIVASIVHKKIFSSVEYFCAFCICFGLVLFAAADWTLTPSFHPIGLAFVSLSVCADAVLPNAQERLFRLGSSRLEVTFYTNIFTLIVMTFTTYLSGDLIGMIEFARTSAKLCNYIAIYTFVAYIAISVHMNVVKRFGGVSAVLVATGRKGMTLVLSFLLFPKSFSWFYVMGAIMVLGSLLLSSLVKIR 300          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: OEU17125.1 (UAA transporter, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 319.3 bits (817), Expect = 1.700e-83
Identity = 170/299 (56.86%), Postives = 215/299 (71.91%), Query Frame = 0
Query:   73 EALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMKAR 372
            E L    +F LLV G+FFFFG+HN LQE IM  PGF FG  LG+LEVLGVT  S+ ER+   +   R A L AY   T CLL SSSLSN AL+YIN+PTKVVFRSCKLIPTM++A +++KK F+ +EY  A  +C GL+ FA AD  + P+F P G+  VSLSV  DA+LPN Q RLF  GSSRLEVTFY+NI TL++M+F+T LSGDL+G + +AR++     Y+ +YT +AY+AIS+HM +V+ FG V+AVLV   RK MT+ LSFLLFPK FS  YV G ++VLG L  S+ +K R
Sbjct:    1 EKLSSPIQFSLLVCGVFFFFGIHNYLQEAIMSIPGFRFGVMLGYLEVLGVTVCSFLERRCIAQETQRIAPLSAYPLLTFCLLSSSSLSNLALNYINFPTKVVFRSCKLIPTMIVASIVHKKIFSSVEYFCAFCICFGLVLFAAADWTLTPSFHPIGLAFVSLSVCADAVLPNAQERLFRLGSSRLEVTFYTNIFTLIVMTFTTYLSGDLIGMIEFARTSTKLCNYIAIYTFVAYIAISVHMNVVKRFGGVSAVLVATGRKGMTLVLSFLLFPKSFSWFYVMGAIMVLGSLLLSSLVKIR 299          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: GAX17645.1 (solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Fistulifera solaris])

HSP 1 Score: 299.3 bits (765), Expect = 1.800e-77
Identity = 159/297 (53.54%), Postives = 215/297 (72.39%), Query Frame = 0
Query:   73 EALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMK 370
            E +   T+F +L   +F FFG+HN LQE IM+ PG+ +G  LGF EVLGVT  S+WER +  +   R A + AY   T CLL SS+LSN +L++IN+PTKVVFRSCKLIPTM+IA + + K F+ +EY+ A A+C+GL+ FA AD ++AP+F P G+  V+LSV  DA+LPN Q RLF+AGSSRLEVT Y+NI+TL+ M+F+T+LSGDL G      ++ +   Y+++YT+++YLAIS+HM +V+ FG V AVLV  +RK MT+ LSF+LFPK FS  Y  G +LVLGGL  S+  K
Sbjct:   24 EMMSSNTQFVILGSAVFVFFGIHNYLQEAIMNVPGWNYGVMLGFFEVLGVTVCSFWERHYVRKEYGRVAPISAYPLLTGCLLASSALSNLSLNFINFPTKVVFRSCKLIPTMIIASIWHVKIFSSVEYVCAFAICVGLVLFAAADWELAPSFHPIGLIFVTLSVCADAVLPNAQERLFQAGSSRLEVTVYTNILTLIAMTFTTMLSGDLWGCWKLLTTSDSLLSYILIYTIISYLAISMHMNVVKRFGGVTAVLVATARKGMTLILSFVLFPKGFSWFYPAGAILVLGGLLYSSLYK 320          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: GAX26187.1 (solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Fistulifera solaris])

HSP 1 Score: 298.9 bits (764), Expect = 2.400e-77
Identity = 158/297 (53.20%), Postives = 214/297 (72.05%), Query Frame = 0
Query:   73 EALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMK 370
            E +   T+F +L   +F FFG+HN LQE IM+ PG+ +G  LGF EVLGVT  S+WER +  +   R A + AY   T CLL SS+LSN +L++IN+PTKVVFRSCKLIPTM+IA + + K F+ +EY+ A A+C+GL+ FA AD ++AP+F P G+  V+LSV  DA+LPN Q RLF+AGSSRLEVT Y+NI+TL+ M+F+T+LSGDL G      ++ +   Y+++YT+++Y+AIS+HM +V+ FG V AVLV   RK MT+ LSF+LFPK FS  Y  G +LVLGGL  S+  K
Sbjct:   24 EMMSSNTQFAILGSAVFVFFGIHNYLQEAIMNVPGWNYGVMLGFFEVLGVTVCSFWERHYIRKEYGRAAPISAYPLLTGCLLASSALSNLSLNFINFPTKVVFRSCKLIPTMIIASIWHAKIFSSVEYICAFAICVGLVLFAAADWELAPSFHPIGLLFVTLSVCADAVLPNAQERLFQAGSSRLEVTVYTNILTLIAMTFTTMLSGDLWGCWKLLTTSDSLLSYILIYTIISYVAISMHMNVVKRFGGVTAVLVATGRKGMTLILSFVLFPKGFSWFYPAGAILVLGGLMYSSLYK 320          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: XP_002183398.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45098.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 287.7 bits (735), Expect = 5.500e-74
Identity = 164/301 (54.49%), Postives = 203/301 (67.44%), Query Frame = 0
Query:   73 EALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWA--GEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMKAR 372
            E  P   +F +L   +F FFGLHN LQE IM+  GF  G  LG+ EVLGV   SY ERK+    E   R A L AY   T CL+ SS+LSN +L+YIN+PTKVVFRSCKL+PTM IA ++++K F+  EY  A AVC GL+ FA AD ++AP+F P G+ LV+LSV  DAILPN Q R+F  G+SRLEVTFY+NI +L+  + +TLLSGDL   +     N+  AVY  +YTL+AY+AIS+HM +V+ FG VAAVLV   RK MT+ LSFL FPK FS  Y  G  LVLGGL  S   K R
Sbjct:   54 EEFPSKLQFAVLACAVFLFFGLHNFLQEAIMNVEGFHRGVMLGYTEVLGVAVCSYLERKFLQNKEEVERVAPLSAYPLLTACLMTSSALSNISLNYINFPTKVVFRSCKLLPTMAIASIIHRKIFSATEYSCAFAVCAGLVLFAAADWELAPSFHPIGLVLVTLSVCADAILPNAQERIFRLGASRLEVTFYTNIFSLLAYTTTTLLSGDLTATIRLVLQNRQLAVYFTVYTLIAYVAISVHMMVVKRFGGVAAVLVATGRKGMTLILSFLFFPKSFSWFYPAGAFLVLGGLLVSTLAKLR 354          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: CBJ32031.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 275.0 bits (702), Expect = 3.700e-70
Identity = 149/300 (49.67%), Postives = 206/300 (68.67%), Query Frame = 0
Query:   72 IEALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMKAR 372
            +++L    KF +LV  +   FGLHN+LQE +    GF FGW+LG LE +GV   S  ER   GEGG R A  R+Y+     L  SSSLSN AL+YI YPTKV+FRSCKLIPTM IA +  KK  +  E++AA +VC GL+ F  AD ++ P F P GI +V LSV  DA LPN+Q  +F  G+SR+EVTF++N +T++ M  ST  +G+L   L+YA ++ +A +++++Y +++++AIS HM +++ +GSV  VLVGN+RK+MTI LSF+LFPKPFS  +V GG LVLGGL  +  +K R
Sbjct:  114 LDSLSPSLKFAILVTCVMMSFGLHNILQESLFQMEGFNFGWSLGLLEAIGVLVGSMAERVHGGEGGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEVTFFTNSLTVLGMLLSTAANGNLAEFLSYAVTSSSAVLHMLVYCVMSHVAISAHMMVLKEYGSVTTVLVGNTRKSMTIALSFVLFPKPFSYRFVLGGALVLGGLAANVMIKER 413          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: XP_005830190.1 (hypothetical protein GUITHDRAFT_73367 [Guillardia theta CCMP2712] >EKX43210.1 hypothetical protein GUITHDRAFT_73367 [Guillardia theta CCMP2712])

HSP 1 Score: 272.3 bits (695), Expect = 2.400e-69
Identity = 157/302 (51.99%), Postives = 204/302 (67.55%), Query Frame = 0
Query:   72 IEALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFT-FGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEYMAALAVCLGLIFFAFADVQVAPAFSP-WGITLVSLSVVCDAILPNLQVRLFEAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMKAR 372
            ++ALP   +F +L   +F FFG HN LQE I    GF   G  LG+LEV+GV   S++ER   GE G R      Y+  T+CLLG+S LS   L+YINYPTKVVFRSCKLIPTM +A VM+ + F+ +E ++A+ VC GL  FAFAD+      S  +G++L +LSV+ D+ LPN Q  LF  G+S LEVT+Y+N+   V+M+F    +G LLGA  +  SN  A +YL +YT++AY+AIS HM +V  +GSV AVLVGN RK  TI LSFLLFPKPFS  YV+G +LV GGLT +AY+K R
Sbjct:    5 LDALPGPIQFTVLASAVFIFFGAHNYLQEAISRMQGFEGLGSILGYLEVMGVMVCSFFERMMVGEKG-RTVKAMNYMKLTMCLLGTSYLSTVGLNYINYPTKVVFRSCKLIPTMGVALVMHHERFSMVEVLSAVCVCAGLAMFAFADMSGEQKVSTVYGMSLQALSVIADSFLPNFQQALFRQGASTLEVTYYTNLYVFVIMTFLGGGTGHLLGAYNFILSNAWAVMYLTIYTIVAYVAISFHMRVVSRYGSVIAVLVGNIRKAGTIALSFLLFPKPFSWFYVYGTLLVFGGLTATAYVKDR 305          
BLAST of NO02G05710 vs. NCBI_GenBank
Match: XP_002287801.1 (hypothetical protein THAPSDRAFT_21259 [Thalassiosira pseudonana CCMP1335] >EED95244.1 hypothetical protein THAPSDRAFT_21259 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 244.6 bits (623), Expect = 5.300e-61
Identity = 165/381 (43.31%), Postives = 228/381 (59.84%), Query Frame = 0
Query:   51 TPAQPDTPKKLFSFL-THVTLTIEALPRLTKFCLLVLGLFFFFGLHNLLQEKIMHFPGFTFGWTLGFLEVLGVTFFSYWERK---WAGEGGVRR---ASLRAYLATTLCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVM-NKKTFTGIEYMAALAVCLGLIFFAFADVQVA-PAFSPWGITLVSLSVVCDAILPNLQVRLFEA-GSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYA--------------------RSNQTAA------------------------------VYLVMYTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPLYVWGGMLVLGGLTGSAYMKAR 372
            TP++ +T KK  + + T ++  +E LP+  +F  L L +FFFFG+HN+LQE +++  GFTFG  LG++EV+GVT  S+ ER      G G  RR   A L AY   T+CLL SSSL++ +L+YIN+PTKVVFRSCKL+PTM++A VM N K FT +E  +A+AVC GLI FA  D  ++ P F P+G+TLV++SV  DAILPN Q +LF    +S+ EV FY+N+ TLV+ + S  LSGDL+G   +                      SN T A                              VY++ Y L++++A+S H  +V+ FG VAAV VG +RK MT+ LSF+LFPK  +  Y  G +LVLGGLT ++  K R
Sbjct:   26 TPSRGNTYKKSENNIGTMISNKLETLPKAAQFISLALCVFFFFGIHNVLQEAMINTEGFTFGVMLGWMEVMGVTLCSWIERSSLPLLGNGDGRRPRSAPLLAYPPLTICLLLSSSLASWSLNYINFPTKVVFRSCKLLPTMILAVVMGNAKRFTIVEVGSAVAVCAGLITFAAGDWSLSHPKFHPFGLTLVTMSVFADAILPNAQEKLFRTYDASKSEVMFYTNVFTLVVQTGSAWLSGDLMGMCHFVMGQSSSNDQSQSFLSQFTRDMSNSTTAMGVQDHLDASDESLMIAEDTHTGKIRRKFLVYIIFYILISHIAVSAHTAVVKKFGGVAAVFVGTARKGMTLVLSFVLFPKEGNWKYAVGALLVLGGLTIASLEKQR 406          
The following BLAST results are available for this feature:
BLAST of NO02G05710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30103.16.000e-13772.31udp-galactose transporter [Nannochloropsis gaditan... [more]
XP_005855633.14.500e-8482.13solute carrier family member b3 [Nannochloropsis g... [more]
OEU17103.11.700e-8356.86UAA transporter, partial [Fragilariopsis cylindrus... [more]
OEU17125.11.700e-8356.86UAA transporter, partial [Fragilariopsis cylindrus... [more]
GAX17645.11.800e-7753.54solute carrier family 35 (adenosine 3'-phospho 5'-... [more]
GAX26187.12.400e-7753.20solute carrier family 35 (adenosine 3'-phospho 5'-... [more]
XP_002183398.15.500e-7454.49predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ32031.13.700e-7049.67conserved unknown protein [Ectocarpus siliculosus][more]
XP_005830190.12.400e-6951.99hypothetical protein GUITHDRAFT_73367 [Guillardia ... [more]
XP_002287801.15.300e-6143.31hypothetical protein THAPSDRAFT_21259 [Thalassiosi... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007269NSK007269Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05710.1NO02G05710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668092gene_1159Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100258g2gene550Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05710.1NO02G05710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05710 ID=NO02G05710|Name=NO02G05710|organism=Nannochloropsis oceanica|type=gene|length=2640bp
ATGCGTCGCGAGCCCCACCAACTATCAAATTCCTTCGATACCATTCACAA
GCCTACCCTCCACGAACGGGAAATGGAGAAAGGCAGGGGAGGCAACGATG
GCAACAGCAGCACCTTGGAGACCGAGCGGATGATGCTGCTAAGGgtacgt
tgtcgcgaggggaaggtatggggggggagcaaaaccgagtgttctaagat
ttgttgtctgctacgtgtcctacacccatcctaacccctcccgtactcgc
ttttgtccgtttcctttcttatttcacccttttctcacgcatatctccct
ccggtccgctgacgtcacacatacacacacccgcgcaacttcccctcctt
tcctccatatttccctccctcccttctttccccttccaaaaccacagCAG
TCCACTCCTGCCCAACCAGATACTCCCAAAAAGCTCTTCTCCTTCCTTAC
CCATGTCACTCTCACCATTGAGGCCCTCCCTCGCCTCACTAAATTCTGCC
TCCTCGTCCTTGGCCTCTTTTTCTTCTTTGGCTTACACAACCTACTTCAA
Ggtgagcacatcaaggaataaagagaaagaggggaagaagggagagacga
gggggggaaagaaagggaaaaatagtgttgccgtgccgatctaattccct
tccctccctttctcctttcatgcagAAAAAATCATGCATTTCCCCGGCTT
CACATTTGGATGGACCCTCGGCTTCCTGGAGGTGCTGGGCGTGACTTTCT
TCTCGTACTGGGAACGGAAATGGGCTGGGGAGGGAGGGGTGAGGAGAGCT
AGCCTCCGAGCCTATCTGGCGACAACCCTGTGTCTGCTTGGGAGTTCGTC
CTTGTCCAATAAGgtaaggagggagggagggaggaggggagggagggagg
gagggtggttgtccacaagtcgaaaccaaaatatccctcacatctgtgtg
ccctccttcctccctccctccctccctcccttcccccctccagGCCTTGG
ACTACATCAACTACCCGACGAAGGTGGTCTTTCGTTCCTGCAAGCTCATC
CCTACCATGGTCATCGCCGGgtacggacgtccctccctccctccctcctt
ccctccctttctccagcccttatttctctttccctctctttgactcctgt
gcatgcttcaaacggaggatagcatggtcatgaaatcgcgctctctctcc
accctccccttcctccctcccgccctttttcctacccgcatcatttgttc
cgcttcatctcctctttctgatttccccttcccccccgtacctccctcgt
ttcctcaccctcagCGTGATGAATAAGAAGACATTCACGGGTATAGAGTA
CATGGCCGCCCTCGCTGTCTGCCTGGGTCTTATTTTCTTCGCCTTTGCCG
ACGTCCAGGTGGCGCCTGCTTTCTCACCGTGgtgaggagggagggaggcc
gggaggggggaaagagccggtcatgcttctccttgttgtctcatcatcta
tcctctccctccctccctcccagGGGCATCACGCTTGTCTCGCTCTCGGT
GGTTTGTGACGCCATCCTCCCCAACCTCCAAGTCCGACTCTTCGAGGCTG
GCTCCTCCCGCCTGGAAGgtaaggcaggcagggacggaggtagggaggga
aggaggggaggagggaaagagggcaatatcctgcactgatgtcgacaccg
aggatcgcgtcgtccctccctccctccctcgtcccctccctgcaatcctt
cggcccttgtgatcatgtccttctccaccttccctattcgcgccgcctga
cgaactcctttctccctccctccctccctcccccccccgcagTGACCTTC
TACTCCAATATCATGACCCTAGTTCTTATGTCCTTCTCCACCCTCCTCTC
CGGAGACCTCCTGGGGGCCCTCGCCTATGCCCGAAGCAACCAGACAGCGG
CTGTATACTTGGTCATGTACACACTGTTAGCGTACCTTGCCATCTCGCTG
CATATGgtacgagggaggggggaaggaagggatggagggagtgaggggaa
atcattgtgtatttttgggttggaggtgtttgggttggaggtgtttggtc
cctttcagtctcagagcttgtcaattatttttatcatgtttggtgtttgt
cgtacctcccgcatgcctttcctcctcacctcttcacccccctctccttg
tcttccactctacctcccgctctcggttttcacacacacaatccctcgct
ccctctgggacaaacactcttgaacaaatcaacaaacaacacataaatta
atcacttgcttcttcacggacacgcactcacgcatgcatcaacaaacaac
acatgaatcaacagACGATGGTCCAGAGCTTCGGGTCAGTCGCTGCTGTA
CTTGTCGGGAACAGCCGGAAAACGATGACGATTTGCTTGTCCTTTCTGTT
GTTTCCCAAGCCCTTCTCGCCTTTGTATGTGTGGGGGGGCATGCTGGTGT
TGGGGGGCTTGACGGGAAGTGCCTACATGAAGGCAAGGGAGAAGGGGGGA
GGGAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGAAGGTGGTGGTGCG
ACCTGTGGCGGTGGAGGCTGAAATGCGGAGTCGGCAATAG
back to top

protein sequence of NO02G05710.1

>NO02G05710.1-protein ID=NO02G05710.1-protein|Name=NO02G05710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MRREPHQLSNSFDTIHKPTLHEREMEKGRGGNDGNSSTLETERMMLLRQS
TPAQPDTPKKLFSFLTHVTLTIEALPRLTKFCLLVLGLFFFFGLHNLLQE
KIMHFPGFTFGWTLGFLEVLGVTFFSYWERKWAGEGGVRRASLRAYLATT
LCLLGSSSLSNKALDYINYPTKVVFRSCKLIPTMVIAGVMNKKTFTGIEY
MAALAVCLGLIFFAFADVQVAPAFSPWGITLVSLSVVCDAILPNLQVRLF
EAGSSRLEVTFYSNIMTLVLMSFSTLLSGDLLGALAYARSNQTAAVYLVM
YTLLAYLAISLHMTMVQSFGSVAAVLVGNSRKTMTICLSFLLFPKPFSPL
YVWGGMLVLGGLTGSAYMKAREKGGGKGGGGGGGGGEKVVVRPVAVEAEM
RSRQ*
back to top
Synonyms
Publications