NO02G05670, NO02G05670 (gene) Nannochloropsis oceanica

Overview
NameNO02G05670
Unique NameNO02G05670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3009
Alignment locationchr2:1502814..1505822 -

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Properties
Property NameValue
DescriptionNADH dehydrogenase, putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1502814..1505822 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
IPR000103Pyridine_nuc-diS_OxRdtase_2
Homology
BLAST of NO02G05670 vs. NCBI_GenBank
Match: XP_005854223.1 (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22137.1 NADH dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 605.9 bits (1561), Expect = 1.300e-169
Identity = 297/445 (66.74%), Postives = 336/445 (75.51%), Query Frame = 0
Query:  113 EALVMKKKAYTATVRRDARPPVVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGITFYQAHATRLNLEDKVVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVENHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQDPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDE-EGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            E L   KKAYTA  +RDARPPVVILGSGWAGFQLARDL+K K+DVT+ISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI FYQA ATRLN E++ VAC+E ++ ERFE+NYEYLILAVGSTTNTF +PGVC +NHVYFLKQL                                              SELYDFLRKDVH  YPDLE  VSVTL+EAS+HILG+FDRRLVDY                    V+P V WLKDGTPLHFGLCVWSTGVKA PL+++LP + PKG GGR+LVD RLRL G + KG+FA+GDCA+S + PLPCLAQ AQQQA+YLGGVLN+Y +PH + +VPPF+Y+H+GSMAQLGMW GVVDSAKLD+ +G   G+K VL G TAFLLWRAAYWTKSVSWANK+LIPM+WLKSWIFGRDISRF
Sbjct:   25 EGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQL----------------------------------------------SELYDFLRKDVHILYPDLEHMVSVTLIEASDHILGSFDRRLVDY--------------------VEPNVAWLKDGTPLHFGLCVWSTGVKATPLVQALPPSFPKGPGGRLLVDGRLRLQGHDQKGVFAVGDCAISETRPLPCLAQVAQQQAKYLGGVLNKYSEPHVNKEVPPFEYRHLGSMAQLGMWKGVVDSAKLDDKKGDEDGKKSVLTGWTAFLLWRAAYWTKSVSWANKILIPMYWLKSWIFGRDISRF 403          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: XP_004336447.1 (NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff] >ELR14434.1 NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 406.8 bits (1044), Expect = 1.100e-109
Identity = 210/440 (47.73%), Postives = 289/440 (65.68%), Query Frame = 0
Query:  131 RPPVVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTI-PGITFYQAHATRLNLEDKVVACQEVFIDERFE----------INYEYLILAVGSTTNTFGIPGVCVENHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLN---RYQDPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            R  +V+LG+GWAG++L  D+D  KY++++IS RN+FLFTPLL STTVGTLEFR + EPVRT  PG+ + QA AT ++  +KVV  + V+ +   +          I Y+ L++AVG+  NTFG+PG  VE + YFLK ++DAR IR RIIECFERAS P    A ++RLL FV+VGGGPTSVEF++EL+DFLRKDVHK YPDLE++V +TL+EA + +L TFD+RL DY  + F++R + V    SV +V    + L DG  + FGL VWSTG+  +P I+ LP   PK   GR+LVD+ L +     +G++A+GDCA   + PLP  AQ A+Q+ +YL   LN   R ++P        F+Y H G +A +G +  ++DS  +              G   +++W AAY TK VS  NKM+IPM+W KS++FGRDISRF
Sbjct:   55 RKKLVVLGNGWAGYRLILDVDISKYELSVISPRNYFLFTPLLTSTTVGTLEFRGVIEPVRTARPGLNYIQAGATSVDTTNKVVTFESVYEERETDEEVPVHPAASIKYDELVIAVGAAPNTFGVPG--VEKYCYFLKSVADARNIRQRIIECFERASSPTTTEAERSRLLHFVIVGGGPTSVEFSAELHDFLRKDVHKIYPDLEKQVQITLIEAGKTLLSTFDQRLSDYTMRTFRKRNIDVRTSVSVKQVKRHEMVLSDGAVIPFGLGVWSTGLSPIPFIKGLP--FPKDRSGRLLVDEYLHVKAPGVEGVYAVGDCAAFETNPLPATAQGAEQEGKYLAQALNAKARGEEP------KKFQYHHKGMLAYVGGYRALIDSPLIKR-----------SGFLTWIMWNAAYITKLVSIKNKMMIPMYWFKSFVFGRDISRF 473          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: GAX22180.1 (hypothetical protein FisN_19Lh240 [Fistulifera solaris])

HSP 1 Score: 382.1 bits (980), Expect = 2.900e-102
Identity = 217/503 (43.14%), Postives = 281/503 (55.86%), Query Frame = 0
Query:  123 TATVRRDARPPVVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-TFYQAHATRLNLEDK---VVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVE--NHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKV----------------------DP------------CVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQ-----------------------------DPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            + + ++  +P VVILGSGWAG  LAR LDK+KYDV LIS  NHFLFT LLPST VGTLEFR IQEPVRTI G+  +YQA A +L + D+   VV C ++F    F + Y+YL++A G+ TNTF  PG+       V+FLK L  AR IR+R++ECFERAS P++    + RLLSFV+VGGGPTS EF +ELYDFL++DV +WYPDL   V VTLVEA   +LG+F + L DY  +  +++K+ V +  +V+ V                      DP             V    DGT L FG  VWS G+  V  ++     + +   GRI+VD+ LR+   E+  +FA+GDCA   S PLP  A  A+QQA YL    N+Y                              +P      P F YK+ G MA +G   GV D    D        K  + G  AF+ WR  Y TK +SW N MLIPM+W K+ +FGRDISRF
Sbjct:   35 STSTKKTKKPRVVILGSGWAGNTLARRLDKQKYDVRLISPANHFLFTSLLPSTAVGTLEFRAIQEPVRTIAGLGEYYQAKALQLGVTDEGKTVVHCADLFKGHEFPVRYDYLVVAAGNKTNTFQTPGIAEREGKEVFFLKHLYHARQIRNRVLECFERASNPNITDFERDRLLSFVIVGGGPTSCEFTTELYDFLQQDVVQWYPDLMSHVKVTLVEAGPGLLGSFHQSLADYYLKKLKEKKIDVRLSMAVIGVELRPYAKANTTSDESPNSDVTNDPNHPHRSSAMGQYTVAQFADGTELPFGTMVWSAGLAPVRFVKDSGFQLQR---GRIVVDEYLRVPDHEN--VFALGDCAALVSGPLPPTASVAEQQAYYLADCFNKYYYEAATRKEPLPLPGPVAPALMPWKLLEFLNPILCKSQPEFTYKNRGMMAGMGFGGGVTDLTNTD----LPSPKTTMSGTAAFVTWRTTYLTKQLSWKNMMLIPMYWFKAMVFGRDISRF 528          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: CBN76274.1 (NADH dehydrogenase (ubiquinone) (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 380.9 bits (977), Expect = 6.500e-102
Identity = 186/325 (57.23%), Postives = 241/325 (74.15%), Query Frame = 0
Query:  134 VVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGITFYQAHATRLNLEDKVVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVENHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYL 459
            +VILG+GW GF++AR++DK+KYDVT+IS RNHFLFTPLLPSTTVGTLEFR IQEPVRTI G+ + QA    ++ + K + CQEVF     E++Y+ L++A G+  NTFG+PGV  ENHV+FLKQL DAR IR+R++ECFERA+ P +    ++RLLSFVVVGGGPTS+E+A+EL+DFLR DV +WYPDLE KVSV LVEAS+HI+G+FD +L+ Y  ++ + RKV+VL++TSV  V P    L DG  L FGL VWSTG+    L+ S+     +   GRI +D RLR+ G +  G+FAMGD A +   PL  LAQ A QQ +YL
Sbjct:   20 LVILGTGWGGFRVAREVDKKKYDVTVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLQYLQASVLSVDFKSKTLRCQEVFKGTEHEVDYDSLVIATGAQNNTFGVPGVSEENHVFFLKQLGDARNIRNRLLECFERAASPFISEEERSRLLSFVVVGGGPTSIEYAAELHDFLRTDVKRWYPDLEHKVSVHLVEASDHIMGSFDEKLISYTTRLLENRKVEVLLNTSVASVGPTECTLGDGRKLPFGLIVWSTGLAPTELVSSMEGV--EKERGRINIDGRLRVPGMD--GVFAMGDAAANPENPLGPLAQVADQQGKYL 340          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: EWM30090.1 (Pyridine nucleotide-disulfide oxidoreductase, NAD-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 379.8 bits (974), Expect = 1.500e-101
Identity = 174/232 (75.00%), Postives = 205/232 (88.36%), Query Frame = 0
Query:  326 VSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQDPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDE-EGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            VSVTL+EAS+HILG+FDRRLVDYVG+VFQ+R V+VL DTSV KV+P V WLKDGTPLHFGLCVWSTGVKA PL+++LP ++ KG GGR+LVD RLRL G + KG+FA+GDCA+S + PLPCLAQ AQQQA+YLGGVLN+Y +PH + +VPPF+Y+H+GSMAQLGMW GVVDSAKLD+ +G   G+K VL G TAFLLWRAAYWTKSVSWANK+LIPM+WLKSWIFGRDISRF
Sbjct:    2 VSVTLIEASDHILGSFDRRLVDYVGRVFQERHVRVLTDTSVEKVEPNVAWLKDGTPLHFGLCVWSTGVKATPLVQALPPSLSKGPGGRLLVDGRLRLQGHDQKGVFAVGDCAISETRPLPCLAQVAQQQAKYLGGVLNKYSEPHVNKEVPPFEYRHLGSMAQLGMWKGVVDSAKLDDKKGDEDGKKSVLTGWTAFLLWRAAYWTKSVSWANKILIPMYWLKSWIFGRDISRF 233          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: GAX19656.1 (hypothetical protein FisN_19Hh240 [Fistulifera solaris])

HSP 1 Score: 379.8 bits (974), Expect = 1.500e-101
Identity = 217/495 (43.84%), Postives = 277/495 (55.96%), Query Frame = 0
Query:  131 RPPVVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-TFYQAHATRLNLEDK---VVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVE--NHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKV----------------------DP------------CVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQ-----------------------------DPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            +P VVILGSGWAG  LAR LDK+KYDV LIS  NHFLFT LLPST VGTLEFR IQEPVRTI G+  +YQA A  L + ++   VV C ++F    F + Y+YL++A G+ TNTF  PG+       V+FLK L  AR IR+R++ECFERAS P++    + RLLSFV+VGGGPTS EF +ELYDFL++DV +WYPDL   V VTLVEA   +LG+F + L DY  +  +++K+ V +  +V+ V                      DP             V    DGT L FG  VWS G+  V  ++     + +   GRI+VD+ LR+   E+  +FA+GDCA   S PLP  A  A+QQA YLG   N+Y                              +P      P F YK+ G MA +G   GV D    D        K  + G  AF+ WR  Y TK +SW N MLIPM+W K+ +FGRDISRF
Sbjct:   34 KPRVVILGSGWAGNTLARRLDKQKYDVRLISPANHFLFTSLLPSTAVGTLEFRAIQEPVRTIAGLGEYYQAKALSLGVTEEGKTVVHCADLFKGHEFPVRYDYLVVAAGNKTNTFQTPGIAEREGKEVFFLKHLYHARQIRNRVLECFERASNPNITDFERDRLLSFVIVGGGPTSCEFTTELYDFLQQDVVQWYPDLMPHVRVTLVEAGPGLLGSFHQSLADYYLKKLKEKKIDVRLSMAVIGVELRPYAKANSTSDESPNSDVTNDPNHPHRSSALGQYTVAQFADGTELPFGTMVWSAGLAPVRFVKDAGFQLQR---GRIVVDEYLRVPDHEN--VFALGDCAALVSGPLPPTASVAEQQAYYLGDCFNKYYYEAATRKEPLPLPGPVAPALMPWKLLEFLNPILCKSQPEFTYKNRGMMAGMGFGGGVTDLTNTD----LPSPKTTMSGTAAFVTWRTTYLTKQLSWKNMMLIPMYWFKAMVFGRDISRF 519          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: GBG27407.1 (External alternative NADPH-ubiquinone oxidoreductase B1, mitochondrial [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 376.3 bits (965), Expect = 1.600e-100
Identity = 192/444 (43.24%), Postives = 271/444 (61.04%), Query Frame = 0
Query:  130 ARPPVVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-TFYQAHATRLNLEDKVVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVE--NHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDP--CVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQE---DKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQD---------PHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            ARP +VI+GSGW G+     +DK+KYDV +IS  NHFLFTPLLPS+ VGTLEFR IQEPVRT+  +  +YQA A  ++   + + C+ +F  + F + Y++L+ A G+ TNTF  PG+       V+FLK L  AR IR+RI+ECFERA+      A + RLL+FVVVGGGPTS E   EL DF+R DV KWYPDL++ +S+ LVEA   +LG+FD  +   V + F++R +++ +  SV   DP   +  L DG+ +  G+ VWS G++    ++     + KG G RI++DD LR+   +   D   FA+GDCA++   PL  LAQ A QQA++L    N                 PD  PF +  +GSM   G + G VD  ++ ++ +     G L G  +F +WR+AY  +  SW N++LIPM+W KS++ GRDISRF
Sbjct:  294 ARPRIVIVGSGWGGYSFLSYIDKKKYDVQVISPSNHFLFTPLLPSSVVGTLEFRAIQEPVRTVRNLGAYYQAKALSVDENTRQITCKGIFSGDEFRVEYDFLVCAAGAKTNTFNTPGIADREGKEVFFLKHLHHARQIRNRILECFERAAIHLTDDAERDRLLTFVVVGGGPTSCELVGELRDFIRNDVAKWYPDLQDYISIHLVEAQSRLLGSFDESVAKIVERRFRRRNIQLHLGASVTGFDPETGITKLSDGSGIPTGMLVWSAGLEQTRFVQDGLDGVEKGPGKRIIIDDHLRVSDPDNKFDNRFFALGDCAINMETPLAPLAQVAGQQAKWLAKAFNEAPTGVGLVAPAAQVFKPDSDPFAFFSLGSMLTFGGFQGAVDFTQVGKQNEE-SNLGALSGFLSFAMWRSAYLLRQNSWTNRILIPMYWFKSFLLGRDISRF 736          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: XP_002296523.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED87219.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 374.4 bits (960), Expect = 6.100e-100
Identity = 203/433 (46.88%), Postives = 277/433 (63.97%), Query Frame = 0
Query:  134 VVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-TFYQAHATRLNLEDKVVACQEVFIDERFEINYEYLILAVGSTTNTFG------IPGVCVENHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKG-IFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQDPHCSPDV--PPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            VVILGSGW G+ LAR L KE +DV ++S  NHFLFTPLLPST VGTLEFR IQEPVRTI G+  +YQA AT ++LE++VV C++++   +F++ Y+YL++A G  +NTF       + GV     V+FLK L  AR IR+RI+ECFERAS P +P   + RLLSF+VVGGGPTS EF SEL+DF+ KDV  WYPDL + + +TLVEA   ILG+FD+ L +Y  +   ++ + V ++T++  VD   +   DG  +        + +  V LI +  LT+ +    R++VDD LR+   E KG  FA+GDCA S ++ LP  A  A+QQA YL    N+Y   +C  DV  P F+YK+ G+MA +G   GV D    D        K  + G  ++L+W + Y TK +S  N +LIPM+W K+ +FGRDISRF
Sbjct:    2 VVILGSGWGGYTLARRLQKELFDVRVVSPANHFLFTPLLPSTAVGTLEFRAIQEPVRTIKGLGHYYQAKATNIDLENRVVTCEDLYKGVKFDVAYDYLVVAAGKKSNTFNTHNIQRLEGVV----VFFLKHLYHARQIRNRIVECFERASNPTIPDVQRDRLLSFIVVGGGPTSCEFMSELHDFINKDVANWYPDLVKHIKLTLVEAGPGILGSFDKALSEYYLKKLNEKNIDVRLNTAISGVDERYI---DGEQITVARFADGSEINFVKLISNSNLTLDR---DRVIVDDYLRI--PETKGRAFALGDCAASLNDKLPPTATVAEQQAIYLSDCFNKY---YCKFDVSSPKFQYKNRGAMASMGFGGGVTDLTNTD----LPSPKTTMSGQASYLVWTSTYLTKQLSVQNMILIPMYWFKALLFGRDISRF 415          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: OEU12854.1 (FAD/NAD(P)-binding domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 372.9 bits (956), Expect = 1.800e-99
Identity = 207/442 (46.83%), Postives = 274/442 (61.99%), Query Frame = 0
Query:  134 VVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-TFYQAHATRLNLEDKVVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVENH----VYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQDPHCSPD--------------VPPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            +VILG+GW G+ LA  LDK K+DV +IS  NHFLFTPLLP T VGTLEFR IQEPVRTI G+  +YQA A  L+   K + CQ++F  E F+I Y++LI+A G+ TNTF I G  +++H    V FLK L  AR IR+RI+ECFERAS P++  + + RLLSF+VVGGGPTS EF +ELYDF+ +DV KWYPDL++++ +TLVEA   +LG+F + L +Y  +  Q R V V + T+V  V  C     D T L FG+ VWS G+  V  ++   L++ K   GRI VD+ LR+   + + IFA+GD A+  S  LP  A  A+QQA Y+    N Y       +              +P   Y + G+MA +G   GV+D  K D        K    GL AFL WR+ Y TK +S+ N +LIPM+W K  +FGRDISRF
Sbjct:   25 IVILGTGWGGYTLANRLDKNKFDVRVISPANHFLFTPLLPGTAVGTLEFRAIQEPVRTIRGLGEYYQAKARTLDTTSKTITCQDIFKKELFDIQYDFLIIATGNKTNTFNIEG--IDSHEGKSVLFLKHLYHARQIRNRILECFERASNPNISVSERQRLLSFIVVGGGPTSCEFTTELYDFIHEDVSKWYPDLKDEIKLTLVEAGSGLLGSFHQSLSEYYLKKLQTRNVDVRLKTAVTGV--CDQQF-DNTELPFGMMVWSAGLAPVKFVQGSGLSLHK---GRIEVDEYLRVPDSKGR-IFALGDNAIVNSGELPPTASVAEQQAYYISDCFNNYYYKSIIDNEXXXXXXXXGTELPLPGMVYMNRGAMAGMGFGGGVMDLTKSD----LPVPKITTSGLAAFLQWRSVYLTKQLSYTNMILIPMYWFKQIVFGRDISRF 453          
BLAST of NO02G05670 vs. NCBI_GenBank
Match: CEG65172.1 (hypothetical protein RMATCC62417_02009 [Rhizopus microsporus])

HSP 1 Score: 369.0 bits (946), Expect = 2.600e-98
Identity = 193/441 (43.76%), Postives = 278/441 (63.04%), Query Frame = 0
Query:  124 ATVRRDARPPVVILGSGWAGFQLARDLDKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTI-PGITFYQAHATRLNLEDKVVACQEVFID---ERFEINYEYLILAVGSTTNTFGIPGVCVENHVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTSVEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVGQVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIESLPLTIPKGMGGRILVDDRLRLMGQED----KGIFAMGDCAVSASEPLPCLAQSAQQQARYLGGVLNRYQDPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKLDEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFGRDISRF 557
            ++V  + +  V+ILGSGWAGF+L RDLDKEKYDV+++S RN+F+FTPLL ST+VGTLEFR I EPVR+    I ++QA+   ++L+ +V  C     D   +RF ++Y+ LI+AVGS +NTFGIPG  V++H +FLK ++DAR IR R+IECFE AS P +    +A LL FVVVGGGPT +EF+ ELYDF+  D+ + YP L   + +TL + + +ILG+FD RL DY  + F ++ +K+     V +V    V +K+   + +GL VWSTG+   PL++SL          RIL + +L+++ +E       ++A+GDCA   +  LP  AQ A Q+A YL   LN    P     +  FK+++ G MA +G    ++D + +    K  GR        A+LLWR+AY++ S++  NKMLI   W  +W FGRDISRF
Sbjct:   67 SSVSTETKEKVIILGSGWAGFKLMRDLDKEKYDVSVVSPRNYFVFTPLLASTSVGTLEFRCITEPVRSYSKNIKYHQAYCDEIDLDSRVAHCTYNVDDIQQKRFTLDYDKLIIAVGSYSNTFGIPG--VKDHAFFLKDVNDARKIRKRLIECFENASQPGVSDKDKADLLHFVVVGGGPTGIEFSGELYDFIANDLSRLYPTLMPFIRMTLYDVAPNILGSFDSRLADYCHKKFDRKGIKIKTQRYVEEVTKNHVIIKEEGKVPYGLLVWSTGLMQNPLVKSLSSLAKDASKQRILTNGKLQVVDRESGLAYSNVYAIGDCATIKNNDLPATAQVATQKAGYLSKALNSVNSP-----ISDFKFRNKGMMAYIGTSEALLDMSSVHRSAKKSGR-------LAWLLWRSAYFSMSMNTRNKMLIAYHWFLTWSFGRDISRF 493          
The following BLAST results are available for this feature:
BLAST of NO02G05670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854223.11.300e-16966.74NADH dehydrogenase [Nannochloropsis gaditana CCMP5... [more]
XP_004336447.11.100e-10947.73NADH dehydrogenase, putative [Acanthamoeba castell... [more]
GAX22180.12.900e-10243.14hypothetical protein FisN_19Lh240 [Fistulifera sol... [more]
CBN76274.16.500e-10257.23NADH dehydrogenase (ubiquinone) (Partial), partial... [more]
EWM30090.11.500e-10175.00Pyridine nucleotide-disulfide oxidoreductase, NAD-... [more]
GAX19656.11.500e-10143.84hypothetical protein FisN_19Hh240 [Fistulifera sol... [more]
GBG27407.11.600e-10043.24External alternative NADPH-ubiquinone oxidoreducta... [more]
XP_002296523.16.100e-10046.88predicted protein, partial [Thalassiosira pseudona... [more]
OEU12854.11.800e-9946.83FAD/NAD(P)-binding domain-containing protein [Frag... [more]
CEG65172.12.600e-9843.76hypothetical protein RMATCC62417_02009 [Rhizopus m... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05670.1NO02G05670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575547gene_1154Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05670.1NO02G05670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05670 ID=NO02G05670|Name=NO02G05670|organism=Nannochloropsis oceanica|type=gene|length=3009bp
CAAACGTGCAAAATTGTGCCGCCGTGTCACCTGCCCTTTGTCTGTGAGGA
TGTTTCTATTTGTGTTTGTTGGGTTGGTAAATGGCATACAATCAGTGTCC
CTTTCTGAGATCGACCCTCTTCAACTGCTCGCTTTACACCTGTTCACTTT
ACGACCCTTCCACGCCAACCCACTTACTCACACTCAAACCCACAGACGCA
CACGACCTACGCGCGAATAGGGAGAAATACAAAGATAGGACGATGGTGGC
TTACCTGGTCCGGATACGACCTGTTTTTCGGGGCAGAAGCTGTAGCAGCC
GCAGTAGCAGCCTTCGCCTCGCAGCCGCCCCGGCCTCTTCCTTTTCCTCG
TCCTCCACCTCTTGCAATGCCGCTGCTAGCGCTTCCGAAGCTACCACAGC
AACCGCTAGTATGATCGAAGCCTTGGTCATGAAGAAGAAAGCTTACACGG
CCACCGTCAGGCGCGACGCCCGACCCCCGGTGGTTATTCTGGGAAGCGGT
TGGGCGGGCTTTCAATTGGCTCGAGACCTGGACAAGGAGAAGTATGACGT
GACCTTGATAAGCGACCGAAACCACTTCTTGTTTACACCATTACTACCAT
CGACAACTGTTGGTACATTGGAATTTAGGACGATTCAAGAGCCGGTTCGT
ACTATTCCAGGGATCACGTTTTACCAAGgtgaagcggggggggaaaagcg
gaggggacaaagggacggagcgaggagaaagtgctagcgacgaagtccca
ttcctaagtatcgcattgccaccccatggatggctctccatacaaatatt
tagacaaccttagataaaaaaatgcaatgaagtatatatttataacgacc
cttctcacacactcttcctcgcccgctccccatcccaactaagCACATGC
GACCAGACTAAACTTGGAAGATAAAGTGGTGGCATGCCAAGAAGTCTTTA
TCGACGAGCGTTTTGAGATCAACTACGAATATCTGATTTTGGCGGTGGGC
AGCACCACCAACACGTTCGGCATTCCTGGGGTCTGTGTCGAGAACCATGT
GTATTTCCTCAAGCAACTCAGgtagggcaggaaggagggaagggccccca
aactgatcgacatacgaatgcaaattttaatgcaatagtgcatgctgaac
agacagctcatcattgtttcctccttccccggtcgttccttccttacgcc
cctacaagTGACGCCCGCGCCATTCGCTCCCGGATTATCGAGTGCTTCGA
ACGCGCCTCCTACCCGGATTTACCCTCTGCCACCCAAGCAAGGCTTCTCT
CCTTTGTGGTGGTGGGGGGAGGGCCCACCTCGGTGGAGTTTGCGAGCGAG
CTGTACGACTTTTTGAGGAAGGACGTCCACAAGTGGTATCCTGACCTGGA
AGAGAAGgttagagagagaggagtgagggagagagggggagagagaggga
tcgagggaaggcgggaagaagacttcgtgtcttggagctaaaaaatgagt
ttcaaaagttcctctctatgattctttccaagacggccttcggcttaact
gacctcatatccgctcggcttgctctctttctctccacaccctcttttca
gGTCTCGGTGACACTGGTGGAGGCCTCCGAGCACATCCTCGGCACCTTCG
ACCGCCGACTCGTTGACTACGTAGGGCAAGTTTTCCAACAGCGGAAAGTA
AAGGTTCTTGTGGACACCAGTGTTGTCAAGgtaggcacggaaaacaggag
ggagggagggaggtaggtagacgagggatggatgcatatacgcatctaca
caggcatcgcgcgcctatctgaaatgacatgtctttcttctttttgaata
tgtagaaaaataccaagaatgccctgtagtcacgtgaccgtacacacatt
ctctcgcttgttccctcccttcctcccgttagGTGGATCCCTGCGTCGTT
TGGCTGAAGGACGGCACACCCCTCCACTTTGGGCTCTGTGTCTGGAGCAC
TGGTGTCAAGGCCGTCCCTTTGATTGAATCCCTCCCTCTCACCATTCCCA
AGGGGATGGGGGGACGGATCCTGGTCGACGATCGCCTGCGTCTGATGGGA
CAGGAGGATAAGGGCATCTTTGCCATGGGCGACTGTGCAGTCTCTGCATC
GGAGCCTCTCCCTTGCCTGGCCCAATCGGCGCAGCAGCAAGCGCGATATT
TGGGCGGTGTTTTGAATCGCTACCAGGACCCACACTGTAGCCCGGATGTT
CCTCCCTTCAAATATAAGCATATGGGAAGCATGGCACAGCTTGGGATGTG
GAATGGCGTGGTGGACTCGGCCAAGTTGGACGAGGAGGGGAAGGCGGGAG
GTAGAAAAGGGGTGTTGAAGGGTTTGACGGCCTTTTTGCTGTGGCGTGCA
GCATACTGGACGAAGAGTGTCTCATGGGCCAATAAAATGTTAATTCCCAT
GTTTTGGCTGAAAAGTTGGATCTTTGGGAGAGACATCTCTCGGTTTTGAG
GAGTGTCCGAGCACTGGTGATGGCGGTGGTAGTGTCGAAACGCGGCAGCG
GGGAGAATGGTAAGGATCAAATGGGAACAAGAATGAGTAGAGAAAGGATA
AAGAGCCGATGTGACAGAGTCGTGTGGGGGCTAGTAAAAATTGTGTGGCC
TCGTTGGATGCGGGTAGGCGGAAAGGGATTGGACGATGTCGAAGGGCCTA
GTTGCCTTTCGCCGAAGGGATACGATGTCCCCGCTCACAGCCCTCTCTCC
TCGTTTCATGCTCGTCACATTGAGATAGAGTTAGCCTCTTGGAAGGTAGA
ACGAAGTAAACAAGCCCGCCCTTAGTCGTGGCTGTGAGGGATGTGAGAGG
CGGAGGAGAAGCGGCGTGATGGTCTCTTTGAGACAAGAAATGGGACGTCG
CCGTGTGCATTTAGAGGATGAGGTGGAGACGTGTAAGCCGGCATGATTAT
TGCAGGGAGACATCTTGTACACAAATTATAAAATAACGTGAAAATGGTGC
AAGCCGGGT
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protein sequence of NO02G05670.1

>NO02G05670.1-protein ID=NO02G05670.1-protein|Name=NO02G05670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MAYNQCPFLRSTLFNCSLYTCSLYDPSTPTHLLTLKPTDAHDLRANREKY
KDRTMVAYLVRIRPVFRGRSCSSRSSSLRLAAAPASSFSSSSTSCNAAAS
ASEATTATASMIEALVMKKKAYTATVRRDARPPVVILGSGWAGFQLARDL
DKEKYDVTLISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGITFYQA
HATRLNLEDKVVACQEVFIDERFEINYEYLILAVGSTTNTFGIPGVCVEN
HVYFLKQLSDARAIRSRIIECFERASYPDLPSATQARLLSFVVVGGGPTS
VEFASELYDFLRKDVHKWYPDLEEKVSVTLVEASEHILGTFDRRLVDYVG
QVFQQRKVKVLVDTSVVKVDPCVVWLKDGTPLHFGLCVWSTGVKAVPLIE
SLPLTIPKGMGGRILVDDRLRLMGQEDKGIFAMGDCAVSASEPLPCLAQS
AQQQARYLGGVLNRYQDPHCSPDVPPFKYKHMGSMAQLGMWNGVVDSAKL
DEEGKAGGRKGVLKGLTAFLLWRAAYWTKSVSWANKMLIPMFWLKSWIFG
RDISRF*
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Synonyms
Publications