NO02G04570, NO02G04570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04570 vs. NCBI_GenBank
Match: EWM30353.1 (an1-type zinc finger protein 5 [Nannochloropsis gaditana] >EWM30354.1 an1-type zinc finger protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 227.3 bits (578), Expect = 5.200e-56 Identity = 133/239 (55.65%), Postives = 145/239 (60.67%), Query Frame = 0 Query: 1 MSDNDNTQACADDTRPCVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESXXXXXXXXXXXXXXXXXXQALALGEEGSASPLGAAASAASLGSVDLPQGPDATPSQSQTKAVVGMEAGSSSMSSSMGLSAAPSLTTKDLAAPATMEGMVAGGGEAAAATDAATHVTARVVAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLKTTLTGGGQFAKMTDQL 240 MSDN NTQAC DDTRPCVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIES + AL E S A S+ S P P Q ME +S+ S L +L T +AAP V AA + V A + +K KNRC VC+KKVGLTGIECRCE VFCGVHRYPSQH+CAFDHKEHDR NLK+TLTGGGQFAKMTDQL Sbjct: 1 MSDNGNTQACVDDTRPCVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESVPVLSGTSSTAMPLLPPTLSHALSEVRQESTPSAETSSPSSTLGPSSATPPEVPEHEQASIPQAMEVSASASS----LDVPAALETAKVAAP------VVQATPAAVENAVSLPVQASPLPQKKKNRCAVCNKKVGLTGIECRCELVFCGVHRYPSQHSCAFDHKEHDRQNLKSTLTGGGQFAKMTDQL 229
BLAST of NO02G04570 vs. NCBI_GenBank
Match: CBN78322.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 97.1 bits (240), Expect = 8.100e-17 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 0 Query: 172 KKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLKTTLTGGGQFAKM 236 +KN+ RCF C KKVG TGI CRC+ VFC +HRYP QH C FD K DR +LK T+ GGGQF+K+ Sbjct: 204 QKNRKRCFTCHKKVGYTGIACRCDYVFCSLHRYPDQHDCTFDFKTSDRNDLKRTVVGGGQFSKV 267
BLAST of NO02G04570 vs. NCBI_GenBank
Match: GAY02490.1 (zinc-finger containing protein [Pythium insidiosum]) HSP 1 Score: 90.1 bits (222), Expect = 1.000e-14 Identity = 47/87 (54.02%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 157 AATDAATHVTARVVA--------KKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLKTTLTGGGQFAKM 236 A +AA T VVA +KNK RC+ C KKVGLT IECRC VFC HRYP QH C+FD K DRA L GGGQF K+ Sbjct: 45 AEVEAAAVETPAVVAASGDEPPVQKNKKRCWECKKKVGLTAIECRCGYVFCSGHRYPDQHNCSFDFKAADRAELARRNPGGGQFGKL 131
BLAST of NO02G04570 vs. NCBI_GenBank
Match: XP_014384632.1 (PREDICTED: AN1-type zinc finger protein 6 isoform X1 [Myotis brandtii] >XP_014384636.1 PREDICTED: AN1-type zinc finger protein 6 isoform X1 [Myotis brandtii]) HSP 1 Score: 89.7 bits (221), Expect = 1.300e-14 Identity = 67/200 (33.50%), Postives = 93/200 (46.50%), Query Frame = 0 Query: 17 CVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESXXXXXXXXXXXXXXXXXXQALALGEEGSASPLGAAASAASLGSV-DLPQGPDATPSQSQTKAVVGMEAGSSSMSSSMGLSAAPSLTTKDLAAPATMEGMVAGGGEAAAATDAATHVTARVVAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHK 216 C GCGFYG+ +T MCS C+K+ +S + Q + +S + + GSV + P D+T S Q V S S++SS G S T+ D AAP T + + A T+ + K+ KNRCF+C KKVGLTG ECRC V+CGVHRY H C++++K Sbjct: 14 CSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNDRISPPDKVVGCPVCRITNTQCGTIAATSVSSLSDSLPVQCTDGSVPEAPSTLDSTSSSMQPSPVSNQPLLSESVTSSQGDS-----TSADKAAPETEDLQASVSDTAQQPTEEQNKSLEK--PKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYK 206
BLAST of NO02G04570 vs. NCBI_GenBank
Match: XP_014305768.1 (AN1-type zinc finger protein 6 isoform X1 [Myotis lucifugus]) HSP 1 Score: 89.0 bits (219), Expect = 2.200e-14 Identity = 67/200 (33.50%), Postives = 92/200 (46.00%), Query Frame = 0 Query: 17 CVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESXXXXXXXXXXXXXXXXXXQALALGEEGSASPLGAAASAASLGSV-DLPQGPDATPSQSQTKAVVGMEAGSSSMSSSMGLSAAPSLTTKDLAAPATMEGMVAGGGEAAAATDAATHVTARVVAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHK 216 C GCGFYG+ +T MCS C+K+ +S + Q + +S + + GSV + P D+T S Q V S S++SS G S T D AAP T + + A T+ + K+ KNRCF+C KKVGLTG ECRC V+CGVHRY H C++++K Sbjct: 14 CSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNDRISPPDKVVGCPVCRITNTQCGTIAATSVSSLSDSLPVQCTDGSVPEAPSTLDSTSSSMQPSPVSNQPLLSESVTSSQGDS-----TPADKAAPETEDLQASVSDTAQQPTEEQNKSLEK--PKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYK 206
BLAST of NO02G04570 vs. NCBI_GenBank
Match: CCA27656.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 88.6 bits (218), Expect = 2.900e-14 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 170 VAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLKTTLTGGGQFAK 235 + +KNKNRC+ C KKVGL IECRC VFC HRY QH C+FD+K DRA L GGGQF K Sbjct: 93 LVQKNKNRCWECKKKVGLAAIECRCGYVFCNSHRYADQHECSFDYKAADRAELARRNPGGGQFVK 157
BLAST of NO02G04570 vs. NCBI_GenBank
Match: CCI10992.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 87.4 bits (215), Expect = 6.400e-14 Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 170 VAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLKTTLTGGGQFAK 235 + +KNKNRC+ C KKVGL +ECRC VFC HRY QH C+FD+K DRA L GGGQF K Sbjct: 93 LVQKNKNRCWECKKKVGLAAMECRCGYVFCNSHRYADQHQCSFDYKAADRAELARRNPGGGQFVK 157
BLAST of NO02G04570 vs. NCBI_GenBank
Match: XP_021461154.1 (AN1-type zinc finger protein 5-like isoform X2 [Oncorhynchus mykiss] >CDQ73104.1 unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 87.4 bits (215), Expect = 6.400e-14 Identity = 70/221 (31.67%), Postives = 97/221 (43.89%), Query Frame = 0 Query: 11 ADDTRP------CVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESXXXXXXXXXXXXXXXXXXQALALGEEGSASPLGAAAS--AASLGSVDLPQGPDATPSQSQTKAVVGMEAGSSSMSSSMGLSAAPSLTTKDLAAPATMEGMVAGGGEAAAATDAATHVTARVVAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLK 224 A +T+P C GCGFYG+ + MCS C+K+ ++S S Q +G GS +P +A ASL VD P A + + + + MS S A P +T ++PAT G EA T KNRCF+C K+VGLTG +CRC +FCGVHRY +H C +D+K A ++ Sbjct: 2 AQETKPSLTPVLCTTGCGFYGNPRNNGMCSVCYKEHLNRQQSSTHS----------------LSQLSPMGTVGSPTPDASAIQRLEASLAKVD-PSSGSAADMARTIQGSLPVTQQMTEMSISREDKAEPVVTEPTASSPAT-------GDEAKGNT-----------PNPKKNRCFMCRKRVGLTGFDCRCGNLFCGVHRYSDKHNCPYDYKAEAAAKIR 187
BLAST of NO02G04570 vs. NCBI_GenBank
Match: XP_021461153.1 (AN1-type zinc finger protein 5-like isoform X1 [Oncorhynchus mykiss]) HSP 1 Score: 87.4 bits (215), Expect = 6.400e-14 Identity = 70/221 (31.67%), Postives = 97/221 (43.89%), Query Frame = 0 Query: 11 ADDTRP------CVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESXXXXXXXXXXXXXXXXXXQALALGEEGSASPLGAAAS--AASLGSVDLPQGPDATPSQSQTKAVVGMEAGSSSMSSSMGLSAAPSLTTKDLAAPATMEGMVAGGGEAAAATDAATHVTARVVAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLK 224 A +T+P C GCGFYG+ + MCS C+K+ ++S S Q +G GS +P +A ASL VD P A + + + + MS S A P +T ++PAT G EA T KNRCF+C K+VGLTG +CRC +FCGVHRY +H C +D+K A ++ Sbjct: 25 AQETKPSLTPVLCTTGCGFYGNPRNNGMCSVCYKEHLNRQQSSTHS----------------LSQLSPMGTVGSPTPDASAIQRLEASLAKVD-PSSGSAADMARTIQGSLPVTQQMTEMSISREDKAEPVVTEPTASSPAT-------GDEAKGNT-----------PNPKKNRCFMCRKRVGLTGFDCRCGNLFCGVHRYSDKHNCPYDYKAEAAAKIR 210
BLAST of NO02G04570 vs. NCBI_GenBank
Match: CCD28129.1 (zinc-finger containing protein, partial [Plasmopara viticola]) HSP 1 Score: 87.0 bits (214), Expect = 8.400e-14 Identity = 66/219 (30.14%), Postives = 89/219 (40.64%), Query Frame = 0 Query: 17 CVKGCGFYGSAQTGYMCSKCFKDTAGVTRASIESXXXXXXXXXXXXXXXXXXQALALGEEGSASPLGAAASAASLGSVDLPQGPDATPSQSQTKAVVGMEAGSSSMSSSMGLSAAPSLTTKDLAAPATMEGMVAGGGEAAAATDAATHVTARVVAKKNKNRCFVCSKKVGLTGIECRCEGVFCGVHRYPSQHACAFDHKEHDRANLKTTLTGGGQFAKM 236 C+ GCGF+G+ +G MCS C+K T +A++ A+P + K V AA TT APA+ + + A +AA + A + +KNK RC+ C KKVGLT IECRC VFC HR+ QH+C FD K DRA L GGG+F+K+ Sbjct: 9 CLNGCGFFGAPGSGGMCSVCWKKTMSDRQAAV-----------------------------------------------------ASPRTANVKVDV----------------AAVLETT----APASAD--LVDNNSATLKEEAAETLVAEKLVQKNKKRCWECKKKVGLTAIECRCGYVFCSSHRFEDQHSCTFDFKTADRAELARRNPGGGKFSKL 152 The following BLAST results are available for this feature:
BLAST of NO02G04570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04570 ID=NO02G04570|Name=NO02G04570|organism=Nannochloropsis oceanica|type=gene|length=720bpback to top protein sequence of NO02G04570.1 >NO02G04570.1-protein ID=NO02G04570.1-protein|Name=NO02G04570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top Synonyms
Publications
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