NO02G04480, NO02G04480 (gene) Nannochloropsis oceanica

Overview
NameNO02G04480
Unique NameNO02G04480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2615
Alignment locationchr2:1212479..1215093 -

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Properties
Property NameValue
Descriptionprotein kinase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1212479..1215093 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO02G04480 vs. NCBI_GenBank
Match: EWM29529.1 (hypothetical protein Naga_100006g33 [Nannochloropsis gaditana])

HSP 1 Score: 195.3 bits (495), Expect = 5.800e-46
Identity = 163/255 (63.92%), Postives = 189/255 (74.12%), Query Frame = 0 
Query:  171 DCSVMGCTKKSRGSTGRCRRHGGGVTCVVPGCTGFSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLKSKDDWCMIHSRGLGTFLIQRQRERGQGLRPVPCTYFDPSGGCRCAEMATIGVGGPFLCPYHLLLSRCGGGVDCKASCFLKGRCVRHAGEEAVEGECQQPGCCTKAAVDDPYGFCVEHKQWKHFCRHWGCIARALVVGGWCPLHHL 426
            +C V GC +KSRGST RCRRHGGG  C VPGCTGFSRL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KS+++WC +H R L +F  Q +RE  QGL PV C + D     +C E A +  G PF CP HL+L+RCGG VDC+ + +++GRCVRHAG ++   ECQQPGC   A   + +GFC +H+    FC H  C+ARA   GG C +H L
Sbjct:  133 NCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSQENWCQVHGRMLDSFRQQSRREVEQGLHPVTCMHVDSMHSIQCMEPALMSAGLPFFCPTHLILARCGGSVDCRGNSYVRGRCVRHAGGDSSGAECQQPGCTRDALGGEGHGFCEKHRDLGFFCTHTFCVARAKCHGGKCDMHRL 387
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BLAST of NO02G04480 vs. NCBI_GenBank
Match: EWM30284.1 (hypothetical protein Naga_100003g26 [Nannochloropsis gaditana])

HSP 1 Score: 159.1 bits (401), Expect = 4.600e-35
Identity = 156/257 (60.70%), Postives = 174/257 (67.70%), Query Frame = 0 
Query:  169 GADCSVMGCTKKSRGSTGRCRRHGGGVTCVVPGCTGFSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLKSKDDWCMIHSRGLGTFLIQRQRERGQGLRPVPCTYFDPSGGCRCAEMATIGVGGPFLCPYHLLLSRCGGGVDCKASCFLKGRCVRHAGEEAVEGECQQPGCCTKAAVDDPYGFCVEHKQWKHFCRHWGCIA--RALVVGGWCPLH 424
            G  C+  GC KKSRGSTGRCRRHGGGV C +PGCTGFSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LKS+  WC  H R    F +   RE  +GL+ V CT+ DP  G RC E A    G P  CP HL+L+ CG G+ CKA C  KGRC RH  E A   E Q+P C + A  +D  G   + + W     H  C +  +  V  G C +H
Sbjct:  182 GGTCTANGCMKKSRGSTGRCRRHGGGVNCKIPGCTGFSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGLKSRHGWCQGHGRIFDHFRLHHAREVERGLQQVACTHVDPRRGSRCVETALTSRGLPLYCPAHLILAHCGAGIGCKAPCHAKGRCARHLREGADGTESQRPVCSSTAVGEDREGLSEKFQGWITINNHSSCASCVKYPVAAGGCSIH 438
The following BLAST results are available for this feature:
BLAST of NO02G04480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM29529.15.800e-4663.92hypothetical protein Naga_100006g33 [Nannochlorops... [more]
EWM30284.14.600e-3560.70hypothetical protein Naga_100003g26 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007117NSK007117Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04480.1NO02G04480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575093gene_1040Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g26gene438Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04480.1NO02G04480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04480 ID=NO02G04480|Name=NO02G04480|organism=Nannochloropsis oceanica|type=gene|length=2615bp
GCTTCCTTATTTCCCGCAAAACCCACAAAGAATGAGCCGATCTGCCTGCT
CCAGCTGAGGACATGCGCAAGGAGCAGCTGAGTTTCGATTGATACTTCGG
GACACGCAGCGCCCGTGCCTCGTTCTATGGCTAGTGCAGGCAAATCACCC
ACTCGGGCGGACGGAAAGGAAAGATTTTTGCAGCTTCCATCTTCCACCTC
CACGCAGCAGGACGTGCCAGACAGTGGAGGGGGCAGCAGTAGCAACATGC
CTCGTTCGTACGGTCTACGGGCCCGGCGCATGCCCTCCTACCTACAAAgt
aagcctcagcctcacacactgggtcgtcacagggtggacatttatcttcc
ttgacccccgattgatttatttagactttttcccttttttcttaatccct
ctccttccccgacctcctcctttccattcatcctctccttagCGTCTGGC
ACAGAGGACGATAATGAGGATTCGGACTCAGACTCTTCAGTCGACGGCGG
CGGCGGAAGACGAGGAGAAGGAGAAAGGGGAGGGCGAGAGACACGATATC
AGTCACGCAGTCGCGGCGGCAGTGTGAGAAGATATAGTTGCACAGGAGTG
GGGAAAGATGATGATCGTTTGTCGTCCCTGCCTGGGGTTATGGGTGGGGC
TGCTGGTGGGGCTGCTGGTGCCAGCGGCAGTGGTGGGCGTGGTGGTGGTG
GAGGTAGAGGAGGCGGGAACGACAGCAGAAAGCGAAAGAGCCCTACTCCT
CCACCAGGGGGAGGAGGGATGGCAGGAGCGGATTGCTCGGTGATGGGGTG
CACGAAGAAGAGTCGGGGGTCGACAGGACGCTGTCGAAGGCATGGGGGGG
GGGTGACTTGTGTTGTGCCTGGTTGCACGGGCTTTTCCAGGTTGGAGGGG
AAATGCTCCGTGCACGGAGGAGCGCAGATGTGCTTAGTGCATGGGTGTGA
TCGACGGGCGAGGTTCTATGGACGCTGTACGCGGCATGGGGGGTTTGTAA
ATTGTCAGATGGACCGCTGCACTTTGCGGGCGGTGAGTAAGGGGAGGTGT
GCCAAGCACGGGGGCAAAGACCCATGTCGGCATCCGGGGTGCACTCGCCC
GAGGTTGAAGAGTAAGGACGATTGGTGCATGATCCACTCCCGAGGTTTGG
GGACGTTTCTGATTCAAAGGCAGAGGGAGCGAGGGCAGGGGCTGAGGCCT
GTGCCGTGCACCTATTTTGACCCTAGCGGCGGGTGTAGGTGTGCGGAAAT
GGCGACTATCGGCGTCGGGGGGCCATTTCTGTGCCCGTATCATTTATTGT
TGAGTAGGTGTGGAGGGGGGGTGGATTGCAAGGCTTCCTGTTTTCTAAAA
GGGCGGTGTGTGCGGCACGCAGGGGAGGAGGCAGTAGAAGGGGAGTGCCA
GCAACCAGGGTGTTGCACGAAGGCCGCGGTGGACGATCCGTACGGGTTTT
GTGTGGAGCATAAGCAATGGAAACATTTTTGCCGACATTGGGGCTGTATT
GCCCGTGCACTGGTGGTGGGGGGATGGTGTCCTTTGCATCACCTGCAGTT
TGCCGGGGGGCAGGAGGAAGAGAGGGTGGTGCGAGAGGCCATGGCGGCAG
CAGCGGTCAAGAAGAGGGAGGAGGGAGGAGGGAAAGCGGTCTGTGAGGGA
AGACAGCCCAAGCCGTTAAGGTGCTCCTCGTCGTCATATTCCTCGGCCTC
GCCAGGGCCAGGAGCGCGGGAAGGAGAGGCAAGGAAGGAGGGAGCGGAGA
CGAAAGTTGTTGATTATTGGAGGAGAGCTGATTCGATGAATTCGACGGGC
TGTCGACAAGGTGAGGCGGCGTTTTTAAGTGTGGGGGAAGGGACAGGAGA
AATGTACGGGAGGGAGGGAGTGATAGGGAGGGTTGACGTCCCAGAGGGAA
TGGACTTGACGTCCTCCGCTCTTTATTTTGGAGGAACGCCAATTGACATG
CCGCCTGCAACTGGGCCCTCGCCCGTGTCATCCCTCCCCTCCTTTCCGTT
GACCTCGACGTTATATACGTCTTTCATAACGGGCTCGGTGGATTGCGCGT
CGGATTTGGAGGCCTTGTCCTACTGGCATCCGGTTGTGAGAGAGATGGTA
GGGTGGCGTAGAAATGAGGGGGTGGGGAGGGTGTTGGCGATAGAGGATAA
GGAGAAGGAGAAAGAGTGGGAGTGAGGGAGAGCAGAGAAGAAGAAGGGTG
AGTGCGAGTAGGGAAAGGAGGTGTGAATTGATGTAAGCTGTTGTGTTGTA
GCACCTTTCTGTAATTATTTGTGACGTTGGCAAGTCGAAAGAGTGAGCTA
CAGGAAGAACGGGAGGGAGAAGATGACCTGGGGAAGCTTGGAAAGACCCA
GAGGCCGAGCAAGATACAAGCAGCCTTGTGGTTGGGAAAATGTTGTCTAT
CGTGTGGCACGTGGGCGGAAGATATGGATGACTTATGCTCTTTGTCTCTA
CTTTTCTTGCTGTCAGCGGTAGTGCTCCACAGTATTATCTGTAAATACAG
TTAGAATGAAGTACGATTGATTGATTGAGTGGTGGAAGCGCAAAAAATAA
GACCACGACGAAACATAGATCGATCCGTAAACTATCTACAACCAAGAACT
CAAATCCACGCCACG
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protein sequence of NO02G04480.1

>NO02G04480.1-protein ID=NO02G04480.1-protein|Name=NO02G04480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MASAGKSPTRADGKERFLQLPSSTSTQQDVPDSGGGSSSNMPRSYGLRAR
RMPSYLQTSGTEDDNEDSDSDSSVDGGGGRRGEGERGGRETRYQSRSRGG
SVRRYSCTGVGKDDDRLSSLPGVMGGAAGGAAGASGSGGRGGGGGRGGGN
DSRKRKSPTPPPGGGGMAGADCSVMGCTKKSRGSTGRCRRHGGGVTCVVP
GCTGFSRLEGKCSVHGGAQMCLVHGCDRRARFYGRCTRHGGFVNCQMDRC
TLRAVSKGRCAKHGGKDPCRHPGCTRPRLKSKDDWCMIHSRGLGTFLIQR
QRERGQGLRPVPCTYFDPSGGCRCAEMATIGVGGPFLCPYHLLLSRCGGG
VDCKASCFLKGRCVRHAGEEAVEGECQQPGCCTKAAVDDPYGFCVEHKQW
KHFCRHWGCIARALVVGGWCPLHHLQFAGGQEEERVVREAMAAAAVKKRE
EGGGKAVCEGRQPKPLRCSSSSYSSASPGPGAREGEARKEGAETKVVDYW
RRADSMNSTGCRQGEAAFLSVGEGTGEMYGREGVIGRVDVPEGMDLTSSA
LYFGGTPIDMPPATGPSPVSSLPSFPLTSTLYTSFITGSVDCASDLEALS
YWHPVVREMVGWRRNEGVGRVLAIEDKEKEKEWE*
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Synonyms
Publications