NO02G04240, NO02G04240 (gene) Nannochloropsis oceanica

Overview
NameNO02G04240
Unique NameNO02G04240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1313
Alignment locationchr2:1153149..1154461 -

Link to JBrowse

Properties
Property NameValue
DescriptionD-glutamate cyclase, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1153149..1154461 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025504DUF4392
Homology
BLAST of NO02G04240 vs. NCBI_GenBank
Match: EWM30277.1 (protein of unknown function DUF4392 [Nannochloropsis gaditana])

HSP 1 Score: 359.8 bits (922), Expect = 9.800e-96
Identity = 202/351 (57.55%), Postives = 241/351 (68.66%), Query Frame = 0
Query:    1 MSSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVED-MSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYT---TAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARSN 348
            +SS + +I  LE  VQ DEG RGL DL+ PAGELE AA AL  A  PIAILTGFPC+L+H PPTETDGPPGALAII+AC+ L K CILL ++ NAAV+ A VAA    +S +L++E FP K++W   E  RL +L  E+ FVVAIER GP A DGHYYTMRG+ MD  VAPLE+L+ L   ++ S+GIGDGGNE+GMGK  +RI+ S  I  A +IAC T+T+WLLAASVSNWGGYAL CALA VAAE+E   T   T     +GD +        K   +P  D    RR +WV+RLV SEAQ    L  +VAAGARDGITGER   VDGMP   S  MLR LRE AR +
Sbjct:    2 VSSASRIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGP-ARDGHYYTMRGRCMDTFVAPLEQLMSLTRPAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGV-----GPWKAGTDP--DQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRETAREH 344          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: OEU20491.1 (hypothetical protein FRACYDRAFT_234119 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 194.1 bits (492), Expect = 7.100e-46
Identity = 122/343 (35.57%), Postives = 185/343 (53.94%), Query Frame = 0
Query:   11 LEAAVQRDEGKRGLTDLVLPAGELETAASAL--YHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGV--AAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDE--VVAPLERLLDLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARSN 348
            ++A +  D G RG+  L++P G+LE AA  L     P  + +L+GFPC ++  PPTETDGPPG  AI +A  A      ++ ++ N AV +A +   ++ +    + VE FP  + +   ++ R  + A+    +++ ER GPG  DG  YTMR   M+E  ++APL R ++ V      I IGDGGNE+GMGKV+D+I+ +  IS  ++I C     +L+AASVSNWGGYAL  A A                          M +   + N   D +     KWV+R + +   +  +L+  VA G RDG++G+ +  VDGMP ETS   L+++R+   SN
Sbjct:   15 IQAIIGTDAGDRGMKSLIVP-GDLEKAAETLGRLRPPSNVLVLSGFPCCVNESPPTETDGPPGTFAIARAAAAFGHIVTVVTDDCNKAVFAAALNGLSLPENCGKISVETFP--STFEICDEERFRKFAKICDLLISCERAGPG-RDGKCYTMREIDMNEKGLIAPLHRFVEEV--DCKMISIGDGGNELGMGKVIDKIINNPKISNGQKIGCVVPADFLIAASVSNWGGYALAAASA--------------------------MVHVDELNNNETDSV----PKWVDRCLPTNEDEIALLDRCVAVGCRDGVSGKMESTVDGMPLETSLQCLQDIRKAVLSN 321          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_002290540.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92292.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 183.0 bits (463), Expect = 1.600e-42
Identity = 127/358 (35.47%), Postives = 185/358 (51.68%), Query Frame = 0
Query:    2 SSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETA------ASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVN--------LRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDE--VVAPLERLLDLVPE-SVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELRE 343
            S   A I  ++A +  D GKRG+ +LV+P   LE+        S    +P  + IL+GFPC +DH PPTETDGPPGA +I  A + L     ++ +  N  V  A   A+ D S+         +++  FP +      +   L  LA+    ++A ER GP A+DG+ YTMR   M+E  ++APL  ++D+V + +V  + IGDGGNE+GMGKV+D +     I    ++   T+   L+AASVSNWGGY    ALA VAA V AT   A  G               G+              W E+ V +E  +  +L+  V AG RDG++G+++  VDGM    +   LRE+R+
Sbjct:    9 SDILASIDKIQATITTDPGKRGMKNLVVPGDLLESGKIFARLQSKDPKSPPHVVILSGFPCCVDHDPPTETDGPPGAYSIALAAVGLGYRVTVVTDACNEKVFEAAREALLDGSLKNVEQADGLVQLVAFPGEHNMSDQDHDDLKVLAKSADLLIACERAGP-AADGNCYTMRAINMNEKSLIAPLHLMVDVVRDNNVKFLAIGDGGNEMGMGKVIDAVYQH--IPNGAKVGAVTAADHLIAASVSNWGGY----ALAGVAALVRATDENATTG--------------AGLLG------------WTEKCVPTEEAELELLQRCVDAGCRDGVSGQKEATVDGMSASENMDYLREIRD 333          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: GAX13147.1 (hypothetical protein FisN_17Hh076 [Fistulifera solaris])

HSP 1 Score: 176.0 bits (445), Expect = 2.000e-40
Identity = 124/343 (36.15%), Postives = 171/343 (49.85%), Query Frame = 0
Query:    7 VIATLEAAVQRDEGKRGLTDLVLPAGELETAAS--ALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLV-PESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARS 347
            +I  L+A +  D G RG++ L++P  +L  AA   A       + IL+GFPC + H PPTETDGPPG  A+ Q  LAL+    ++ ++ N  V  AG+  +     ++ +E FP        +D RL  LA     ++A ER GP A DG  YTMRG  M+ +VAPL RL+  V   +V  I IGDGGNE+GMGKVL +I A+  I     +AC     +L+AASVSNWG YAL  A   +A                     DC+   +                          Q+  +L+  +    RDG++G  +  VDGMP ETS   LR+LRE+  S
Sbjct:    9 LIQKLQAIIGTDAGHRGMSALIVP-DDLHHAAECFAQMKPSQHVVILSGFPCCVQHTPPTETDGPPGTAALAQTALALSCQTTVVTDKCNEDVFRAGLQHLP----SVVLECFP--ANMTREDDQRLAALASNCDLLLACERAGP-AVDGKCYTMRGIDMEGLVAPLHRLVHQVQARNVPFIAIGDGGNEMGMGKVLSQIHATPQI--LNSVACVVPADYLIAASVSNWGAYALAAATGLLAG-------------------IDCLPTPE--------------------------QEVELLQRCIQQNCRDGVSGRVEMTVDGMPLETSLQCLRDLREVVLS 296          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: GAX20124.1 (hypothetical protein FisN_17Lh076 [Fistulifera solaris])

HSP 1 Score: 174.9 bits (442), Expect = 4.500e-40
Identity = 122/342 (35.67%), Postives = 169/342 (49.42%), Query Frame = 0
Query:    8 IATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGP--IAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLL-DLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARS 347
            I  L+  +  D G RG+  L++P  +L+ AA    H      + IL+GFPC + H PPTETDGPPG  A+ Q   AL     ++ +E N  V  A +  +     ++ +E FP        +D RL  LA +   ++A ER GP A DG  YTMRG  M+ +VAPL  L+ ++   +V  I IGDGGNE+GMGKVL +I A+  I     +AC     +L+AASVSNWG YAL  A   +A                     DC                          V +  Q+  +L+  +  G RDG++G+ +  VDGMP ETS   LR+LRE+  S
Sbjct:   35 IQKLQTIIGTDAGHRGMEALIVP-DDLQHAAECFAHMKPSQHVVILSGFPCCVQHTPPTETDGPPGTAALAQTAQALGCRTTVVTDECNENVFRAALQHLP----SVVLECFP--ASMTREDDQRLATLASKCDLLLACERAGP-AVDGKCYTMRGIDMEGLVAPLHHLVHEVQARNVPFIAIGDGGNEMGMGKVLSQIHATPQI--LNSVACIVPADYLIAASVSNWGAYALAAATGLLAG-------------------IDC--------------------------VPTPEQEVELLQRCIQQGCRDGVSGQVEMTVDGMPLETSLQCLRDLREVVLS 321          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_005825662.1 (hypothetical protein GUITHDRAFT_115230 [Guillardia theta CCMP2712] >EKX38682.1 hypothetical protein GUITHDRAFT_115230 [Guillardia theta CCMP2712])

HSP 1 Score: 167.2 bits (422), Expect = 9.300e-38
Identity = 126/345 (36.52%), Postives = 177/345 (51.30%), Query Frame = 0
Query:    5 AAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQM--DEVVAPLERLLDLVP---ESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIA 345
            A  +  LE A   D+G RG+  L L  GELE A  +L H    +AILTG+PC     PPTETDGPPGALAI +A + + K  +L+ +E N   +   VAA E+   +   +  P  +  G + +A+    + E+  ++AIER GP A DG YYTMRG+ M     +A LE L        +S+ +IG+GDGGNEVGMGK +  + A   +    +IAC      L+ A VSNWGG+AL  AL                           M + +   +P                V+S   ++R+L+A++AAGARDG+T   +  VDGMP ET   +L+ +  IA
Sbjct:    2 ATRLQRLEEAAAEDKGGRGIGPL-LREGELEEATRSLQHVRA-VAILTGYPC-CSSSPPTETDGPPGALAIARALMRMGKRVMLMTDEINREPI---VAAEEEGRRSYGCDPVPVLSFPGGSVNAQELVESLELDCLIAIERAGP-AEDGGYYTMRGRDMSLSVPIAKLESLFACTSKDGKSLVTIGVGDGGNEVGMGKRIKLVRAH--VPLGDKIACTVKADHLIVAGVSNWGGWALALAL---------------------------MISQQSHTDPH---------------VLSLDGEKRILQAMIAAGARDGVTSSDQLSVDGMPWETHEELLKTMLSIA 295          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_008604828.1 (hypothetical protein SDRG_01093 [Saprolegnia diclina VS20] >EQC42259.1 hypothetical protein SDRG_01093 [Saprolegnia diclina VS20])

HSP 1 Score: 164.9 bits (416), Expect = 4.600e-37
Identity = 127/342 (37.13%), Postives = 160/342 (46.78%), Query Frame = 0
Query:   13 AAVQRDEGKRGLTDLV---LPAGELETAASALYHAP--GPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCI-LLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPL-ERLLDLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQ---IACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIA 345
            A VQ D G RG+  L+           A   L   P    +AILTGFPC+LD+ PPTETDG  G LA+  A   LN+  + +L ++ NA VL A +AAV ++ + L    FPP   W     A L  L   I   VAIER G  A DGHYYTMR + M  +VAPL E         V +I IGDGGNE+GMG V     A+T  +K R    IA       LL A +S+WG YALC  LAA   +V     T                                        VV+      V  A++AAGARDGI   +  +VDG+P   +  +L  LR +A
Sbjct:    6 ALVQHDIGGRGMVHLLDGPRDRAAFANAVEVLARLPPASHVAILTGFPCLLDYDPPTETDGLGGTLALAHALYVLNRHVVHILTDDVNAPVLRACMAAVPELDIQL--HAFPPGHLWTAETRAALAALYPSIAAFVAIERAG-AADDGHYYTMRARDMTAIVAPLDECFAHARAHGVPTIAIGDGGNELGMGNV-----AATTKAKVRNGATIATKQDCDHLLVACISDWGAYALCAGLAAYEGDVGVLVPT--------------------------------------HAVVA------VANAMMAAGARDGILACQDTFVDGLPLVETLNLLHALRHVA 295          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_012193566.1 (hypothetical protein SPRG_00060 [Saprolegnia parasitica CBS 223.65] >KDO35214.1 hypothetical protein SPRG_00060 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 162.2 bits (409), Expect = 3.000e-36
Identity = 125/342 (36.55%), Postives = 159/342 (46.49%), Query Frame = 0
Query:   13 AAVQRDEGKRGLTDLV---LPAGELETAASALYHAP--GPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCI-LLVEESNAAVLSAGVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPL-ERLLDLVPESVHSIGIGDGGNEVGMGKVLDRILASTIISKARQ---IACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIA 345
            A VQ D G RG+  L+           A   L   P    +AILTGFPC+LD+ PPTETDG  G  A+  A  AL +  + +L ++ NA VL A +AAV D+ V  R+  FPP   W     A L  L   I   VAIER G  A DGHYYTMR + M  +VAPL E         V +I IGDGGNE+GMG V     A+T  +K R    IA       L+ A +S+WG YALC  LA   ++V                                             ++V       V  A+VAAGARDGI   +  +VDG+P   +  +L  LR +A
Sbjct:    7 ALVQHDIGGRGMVHLLDGPRDRAAFANAVEVLARLPPASHVAILTGFPCLLDYDPPTETDGLGGTFALAHALHALGRHVVHILTDDVNAPVLKACIAAVPDLDV--RLHAFPPGHLWTTETRAALTALYPSIAAYVAIERAG-AADDGHYYTMRARDMTAMVAPLDECFAHARAHGVPTIAIGDGGNELGMGNV-----AATTKAKVRNGAIIATTQDCDHLIVACISDWGAYALCAGLAVRESDV--------------------------------------------AVLVDAHAVVAVANAMVAAGARDGILACQDTFVDGLPLVETLNLLHALRHVA 296          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_002612376.1 (hypothetical protein BRAFLDRAFT_114438 [Branchiostoma floridae] >EEN68385.1 hypothetical protein BRAFLDRAFT_114438 [Branchiostoma floridae])

HSP 1 Score: 154.5 bits (389), Expect = 6.200e-34
Identity = 113/348 (32.47%), Postives = 171/348 (49.14%), Query Frame = 0
Query:    8 IATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAGVAAVED------MSVNLRVEVFPPKTKWGPTEDARLCQLAQE-------ITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSI---GIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRE 340
            I  LE AVQ D G+RG++DL +P GEL     +L HA   +AI+TGFPC  +  PP E DGPPGA+A+     AL K   ++++ S   ++      VED      +   + V  +PP     P  D+ L  L  +          +VAIER G  A+DG Y TM+ K +  +V+P+++L ++  E +  I   GIGDGGNE+GMG+V +++     I+   +IAC     + + A VSNWGG+A+   L  + A                 I    +  A G    +   +G          V S  ++++V+  ++  G RDG+T E    VDG+   T  A + E
Sbjct:  291 IHRLEKAVQADPGRRGISDLHIP-GELLRCVLSLSHA-SSVAIITGFPCHTELTPPEENDGPPGAVAMAAMLQALGKQVTMVMDASRLQLMR---DIVEDCVQTGVLKEGVSVLPYPPTNGTAPDRDSALQFLTHDGDVSRPRYDHLVAIERVG-RAADGTYRTMQAKDISSLVSPIDQLFEVANEEIPGIKTTGIGDGGNELGMGRVQEKV--HQYITNGPEIACAVQADYTITAGVSNWGGWAVAAGLYVLQA---------------CPIHDRYLRRAVGFPRDSRKPLGS---------VPSLEREEKVMSVMIKHGLRDGMTAELGLVVDGLQFGTEHAQIME 606          
BLAST of NO02G04240 vs. NCBI_GenBank
Match: XP_004995581.1 (hypothetical protein PTSG_03849 [Salpingoeca rosetta] >EGD83217.1 hypothetical protein PTSG_03849 [Salpingoeca rosetta])

HSP 1 Score: 153.3 bits (386), Expect = 1.400e-33
Identity = 120/352 (34.09%), Postives = 171/352 (48.58%), Query Frame = 0
Query:    8 IATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAILTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSAG-------VAAVEDMSVNLRVEVFPPKTKWGPTED----ARLCQ---LAQEITFVVAIERTGPGASDGHYYTMRGKQMDEVVAPLERLLDLVPE-SVHSIGIGDGGNEVGMGKVLDRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEATYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQDQRVLEAIVAAGARDGITGERKEWVDGMPKETSS-AMLRELREI 344
            I ++E A++ D G R +  L LP  +L +A  AL H+   IAI TGFPC++    PTE+DGP GAL++ +  + L K   L+V+ +N AV++A        V A+ D    +             ++D    AR      L++ +  VVA+ER G  AS GHY+TMR   MD+ V P++ L  L  E  V +IG+GDGGNE+GMGKVLD  L    + +  +IAC     +L++A VSNWG   L     A+A                               NP             E L+   + +++VL+A  AAG RDG+  E    VDGM  +    A + ELR I
Sbjct:  282 INSIEYAIKEDPGGRNVNALTLP-NQLWSACHAL-HSATHIAITTGFPCLVTRSIPTESDGPLGALSLARTLVLLGKQVTLVVDPANMAVMTAALQRARELVPALADKCSLVEFNADNADASDSSSDDQTTRARAVSEQLLSRGVDAVVAVERAGV-ASSGHYHTMRAAVMDQHVQPIDHLFTLAQERGVATIGVGDGGNELGMGKVLD--LVKEHVPRGEEIACVVGCDYLISAGVSNWGADGLAAGAVALATS-----------------------------NPTE----------AEPLLPDVSFEKQVLQACFAAGCRDGVKPEADMSVDGMAFDAEHVAKIDELRAI 589          
The following BLAST results are available for this feature:
BLAST of NO02G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30277.19.800e-9657.55protein of unknown function DUF4392 [Nannochlorops... [more]
OEU20491.17.100e-4635.57hypothetical protein FRACYDRAFT_234119 [Fragilario... [more]
XP_002290540.11.600e-4235.47predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX13147.12.000e-4036.15hypothetical protein FisN_17Hh076 [Fistulifera sol... [more]
GAX20124.14.500e-4035.67hypothetical protein FisN_17Lh076 [Fistulifera sol... [more]
XP_005825662.19.300e-3836.52hypothetical protein GUITHDRAFT_115230 [Guillardia... [more]
XP_008604828.14.600e-3737.13hypothetical protein SDRG_01093 [Saprolegnia dicli... [more]
XP_012193566.13.000e-3636.55hypothetical protein SPRG_00060 [Saprolegnia paras... [more]
XP_002612376.16.200e-3432.47hypothetical protein BRAFLDRAFT_114438 [Branchiost... [more]
XP_004995581.11.400e-3334.09hypothetical protein PTSG_03849 [Salpingoeca roset... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007085NSK007085Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04240.1NO02G04240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575028gene_1013Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g53gene413Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04240.1NO02G04240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04240 ID=NO02G04240|Name=NO02G04240|organism=Nannochloropsis oceanica|type=gene|length=1313bp
ACAGGCTTCGCACACAGCACACCCCGTAATCAAGGTCATTGATGAGCCGT
GGAAGCCATGGCTTTGATCATGGAACTTGCAGTCGTTAAGTAATTGTCTT
CCCGGTACACTGTCTTTCAGCCACAGCCACAGCCACAGCCATAGCACACA
AGTATGCGAGCATGTCCAGCACTGCGGCAGTAATTGCTACCCTGGAAGCC
GCCGTGCAGCGGGACGAGGGTAAACGAGGCTTGACTGACCTGGTGCTGCC
AGCGGGCGAGCTGGAGACGGCTGCCAGTGCTCTCTACCATGCCCCAGGCC
CCATCGCCATCCTCACCGGATTCCCCTGCATGCTCGACCACATCCCGCCC
ACCGAGACAGATGGCCCACCAGGCGCATTAGCCATTATCCAAGCTTGTCT
TGCGCTCAACAAACCTTGCATTCTATTGGTTGAGGAAAGCAATGCTGCCG
TGCTTAGTGCTGGCGTGGCCGCTGTCGAGGACATGTCAGTCAATCTGCGC
GTAGAGGTCTTTCCACCCAAAACAAAGTGGGGACCGACTGAAGACGCCCG
CCTTTGCCAGCTTGCTCAAGAAATTACTTTCGTGGTGGCCATCGAGCGGA
CGGGCCCGGGAGCTAGCGATGGGCATTACTATACGATGCGCGGAAAACAA
ATGGATGAGGTGGTGGCTCCCCTGGAACGATTGCTGGATTTAGTGCCGGA
GTCTGTGCACAGCATCGGCATCGGAGACGGAGGAAATGAAGTAGGGATGG
GCAAAGTTTTGGACCGAATATTGGCTTCAACAATCATATCAAAGGCGAGG
CAGATTGCGTGTTGCACAAGCACGTCGTGGTTGCTGGCGGCCTCGGTCAG
TAATTGGGGTGGATACGCTTTATGCTGCGCACTGGCAGCAGTGGCAGCAG
AAGTAGAAGCAACATATACAACTGCCAAGAGGGGGAAAGATGGAGATAAG
ATCAAGACTGACTGCATGTCTAACGCTAAAGGCATGAGAAACCCGGCAAA
TGATGGGATGGGCAGAAGAAGGGGGAAATGGGTAGAGCGGTTGGTAGTAT
CCGAGGCACAAGATCAAAGAGTGCTTGAGGCGATTGTGGCAGCAGGGGCT
AGGGATGGAATCACCGGAGAGAGAAAAGAATGGGTGGATGGGATGCCGAA
AGAGACCTCTTCGGCTATGCTGCGAGAGCTGCGGGAGATTGCGAGGAGCA
ATTAGATGTAAATGTACAATTGGTTGTGGATGAAGATTGACGCTCTCCTT
TTCAGAATCAACATAACTTCAGAGCAGCTGCTGTGCCCTTATTCCGATAA
AGAAATCTGTTTC
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protein sequence of NO02G04240.1

>NO02G04240.1-protein ID=NO02G04240.1-protein|Name=NO02G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MSSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAI
LTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSA
GVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPG
ASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSIGIGDGGNEVGMGKVL
DRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEA
TYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQ
DQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARSN*
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Synonyms
Publications