NO02G03770, NO02G03770 (gene) Nannochloropsis oceanica

Overview
NameNO02G03770
Unique NameNO02G03770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1635
Alignment locationchr2:1018581..1020215 +

Link to JBrowse

Properties
Property NameValue
DescriptionTld family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1018581..1020215 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom
Homology
BLAST of NO02G03770 vs. NCBI_GenBank
Match: EWM30302.1 (tld family protein [Nannochloropsis gaditana])

HSP 1 Score: 740.7 bits (1911), Expect = 3.200e-210
Identity = 377/539 (69.94%), Postives = 426/539 (79.04%), Query Frame = 0
Query:    1 MPTLSPALVSPRSSVAGRQTTDAGSPSLPTPSTVSPDKTALRWLETSATRPKLYHAPERLGAGHYHHAHHEILTPDHAQRQYTLIMQDLSKKDPEWLDDLPLFGAPAASFHDHPLTREQEAASRRVLNVLGNTLEIDYCPLLLDLVPLLMVIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLATLAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRFTLCLFKEMKWRLKSMELERAALWWDQLADITFSIDFDIDQGLGTVLAQYGTMVKRSNLDRLLALRMSDPIERELIVKQDIQPLRMHGLGLVADVNGSTSILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDATQ-TVESDMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEVHTIVT 539
            M   SP+  SPR+S A RQ  D  +PS P    V+ +KT  RWLETSA RPKL+HAPER    HY+HAH+EIL+P+ A RQY L+  D +KKDPEW DDLPLFGA A SFHDHPLTREQEAASRRVL VLG T EID+CPLLLDLVPLLMV +                  EAVVYAVV NMHLHRPFYFG GH  FLA +AAFRDYM RYFP TAA MAAVGADTEDWLG+IFYRCL+PLV HR LL+LLEL+LEDGVCFFFRF L LFKE+KWRLK+M LE  A+WW Q+AD TFSIDFD+ QGL TVL  YGT VKRSNLDRLLA+RMSDP+ERELIVKQDI+PLR+HG    AD  G  SILHNKRTYLKL+ASFLP HQR R L MLFSS+RHGRSLD+LYR C N+ PCI++IEE +H HVIGA+CPDPI+P  AVSGTG AFLFRLTRPAVRY+W  D+T+ + E D+FQLAT  FFA+GMSND+DHPGL +DADL+TGSS  S+TFANLPLCG G EKF IR VEV  ++T
Sbjct:    1 MSDFSPS-SSPRNSTAERQ-ADHQTPSPPPDFVVATEKTIKRWLETSALRPKLFHAPERQSDRHYYHAHNEILSPEKAHRQYMLVKDDFTKKDPEWQDDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFL-----------------PEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRMSDPMERELIVKQDIEPLRLHGTTKGAD--GHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEVLVLMT 518          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: EJK75675.1 (hypothetical protein THAOC_02595, partial [Thalassiosira oceanica])

HSP 1 Score: 140.6 bits (353), Expect = 1.500e-29
Identity = 119/441 (26.98%), Postives = 189/441 (42.86%), Query Frame = 0
Query:  115 LTREQEAASRRVLNVLGNTLEIDYCPLLLDLVPLLMVIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLATLAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRFTLCLFK-----EMKWRLKSMELERAALWWDQLADITFSIDFDIDQGLGTVLAQYGTMVK----RSNLDRLLALRMSDPIERELIVKQDIQPLRMHGLGLVADVNGSTSILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEY---KHGHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDATQTVES----DMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEVHTIVTQ 540
            +T   + +   VL+ +   L I+YCP L D+  +L+  M                  E   +A +++M      +       + +   ++  +++R FP+    M   GA  +  L  IF R    L+   D+LR +++FL +G    FR  L + +     +MK   +  +L  +  +WD++   T   DF  ++ L  +  ++  M K    R  L R++       ++   I      P     LG  +D       L         LA +LP   R  KL +++S++ HGRSL SLY  CG     I +IE         V+G +  +P     A  G G  FLFR +  A  + W  D T  +ES    + F +AT  + A+G + D  H GL +  DL TG SH +  F N PL G GQ  F I   EV+  V +
Sbjct:  316 ITSSGKVSLALVLSAVQQVLGIEYCPPLPDIATVLLTHM-----------------PEEYAFATIKDMINDTSHFLPVSQKDYYSWCHSYVFFVKRNFPDHYKLMTLCGALEDAALDPIFKRFFTTLLRPEDVLRFMDIFLVEGRKAVFRLALSILRLVSRDDMK---RLQQLRTSDSFWDEIRKKTLHPDFSFNEQLKKMYPKFAKMAKRYPRRRALRRVIKFHEKTALDNVPIFVDQTPP---KPLGFTSD----GCSLAKPAIVRSNLAKWLPPSLRATKLDLIYSTELHGRSLASLYDKCGRYKNTITLIEVLTGENESTVVGMFATEPWTTNIAPFGDGECFLFRASPDAKCFKWTPDLTFDLESNTVREQFMVATNDYLAMGANTDGTH-GLMLGQDLITGESHRALGFENEPLQGIGQPVFCIGIFEVYRFVRE 728          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: CBN79288.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 119.0 bits (297), Expect = 4.500e-23
Identity = 123/490 (25.10%), Postives = 212/490 (43.27%), Query Frame = 0
Query:   33 TVSPDKTALRWLETSATR-PKLYHA--PERLGAGHYHH----AHHEILTPDH---AQRQYTLIMQDLSKKDPEWLDDLPLFGAPAASFHDHPLTREQEAASRRVLNVLGNTLEIDYCPLLLDLVPLLMVIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLATLAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRFTLCLFKEMKWRLKSMELE--RAALWWDQLADITFSIDFDIDQGLGTVLAQYGTMVKRSNLDRLLALRMSDPIERELIVKQD-IQPLRMHGLGLVADVNGSTS-----------------ILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNA------VSGTGVAFLFRLTRPAVRYSWARDATQTVESDMFQLATKKFFAVG 487
            T   D  A  W + +  +  K+  A  PE    G ++        E  TP H    +R +T +++ + + D    +++P +G       DH ++ E  AA RR+L  + + L +++ P LLD+VP+L+  M                  E+ VY VV  +   RP +F     +F A    F++ ++ +FPET+  M+  GAD  + L  +  R LVP++  + L+ + + +  +G    FR+ L L K  K RLK+++L+  + A WW +L D      F  D  L        T      +   +     D  E E+  + D +   R+   G+ AD                       +L +     KL+  ++P   R ++L ++F+++ HG +LD LY  C    P +L++E   +G ++G +C D     +A      + G G  FLFRL        W   A   V +D+ +   +K    G
Sbjct:   43 TDEDDAAAAEWQQVAGRKLTKMCRAGIPEYFRGGVWNKVMSPTMEEAGTPSHKLQQERIWTRVLERVFEGDGMG-EEVPGYGG-ELRLEDHCMSAEGRAAVRRLLVTIKHMLAVEWSPSLLDVVPVLLTYM-----------------PESCVYGVVEELWGMRPLFFPHSEEEFEAWGGTFKNMVKDFFPETSKEMSKCGADEPEHLRQVLLRMLVPILPLKHLVVVWDAWFCEGSKVIFRYGLALLKMYKKRLKALKLKQGQGAQWWSKLRDWAHEPSFSFDD-LTHKAFSLRTKSGLRPISWAMLENYHDKNEAEVKSRMDKVAGSRLDHKGVAADRADEAQPFFWPPFQLTATFPPPVLLADVPARAKLV-KWVPEILRHKRLRVVFTTEIHGYNLDLLYSHCRTVSPSLLVVEA-ANGVILGGFCSDSWQYPHAKQSQGGMYGNGQCFLFRLHPQPTTCRWQGGA---VAADIIKQHAQKQTGTG 507          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: XP_002291229.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91336.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 118.6 bits (296), Expect = 5.900e-23
Identity = 94/344 (27.33%), Postives = 165/344 (47.97%), Query Frame = 0
Query:  219 MAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRFTLCLFKEM-KWRLKSMELERAALWWDQLADITFSIDFDIDQGLGTVLAQYGTMVKRSN--LDRLLALRMSDPIERE-----LIVKQDIQPLRMHGLGLVADVNGSTSILHNKRTYLKL-LASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKH--GHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDAT----QTVESD----MFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEVHTIVTQPNET 544
            M  VGA + + L  IF R  + L+   D+L+ +++F+ +G    FR  L L + + K  LK+M L  +  WW+++   T    F   + +  +  ++G +  R +    R   L+ +    R+     + V  D  P +  G      ++    I+  K T ++  LA +L    +  KL +++S++ HGRSL +LY+ C      I+++E         IG +         +  G G  FLFR+      ++W  D +      +ESD     F +A  +F A+G ++D  + GL++DADL  G S+ +  F N PL G+G+E+F I  VEV+ ++ +   T
Sbjct:    1 MNNVGALSPEGLEPIFKRFFITLLKREDVLQFMDIFVVEGCKAIFRLALSLNQLISKSDLKAMHLIDSEAWWNEIMKKTLDPSFSFKKQVDIMYPKFGKLSSRQSKRYPRRHILKRAISYHRKWALVNMPVYVDQTPPKPLGF-----ISSDKPIMLAKPTSVRANLAKWLTTSLKSTKLDLIYSTEVHGRSLAALYKECRRTKHTIILVEAITGDISTTIGMFASQAWVVNPSCFGDGECFLFRVDPAPKCFNWTPDVSGSFDDNIESDAIREQFMVARNEFIAMGANSDGTN-GLRLDADLNNGESYTALGFDNEPLAGKGRERFDIGTVEVYRLMWEVGGT 338          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: EJK43791.1 (hypothetical protein THAOC_37732 [Thalassiosira oceanica])

HSP 1 Score: 115.5 bits (288), Expect = 5.000e-22
Identity = 112/460 (24.35%), Postives = 194/460 (42.17%), Query Frame = 0
Query:  111 HDH---PLTREQEAASRRVLNVLGNTLEIDYCPLLLDLVPLLMVIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLATLAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRF--TLCLFKEMKWRLKSME-LERAALWWDQLADITFSIDFDIDQGL---------GTVLAQYGTMVKRSN-LDRLLALRMSDPIERE--LIVKQDIQPLRMHGLGLVADVNGSTSILHNKRTYLKL-LASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDATQTVESDM--------------FQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEVHTIV 538
            HDH   P+  +   +  +VL+   ++L +++CPLL D+  LL+  M                  E+  YA +R   + R          F  T   F D M R FP+T   M  +GA T   L  I  R  VPL+  + +LR+++++  +G    FR   TLC           +   +   +WW+ +   T S  F  D  L         G++      +  RS  + RL++       E E  + + Q+++P+ +        V G   I+  K +  +L L+ +LP   +  +L +++SS+ HGRS++  YR C      + ++E +  G V+G Y     +   +  G G  FLFRLT     + +   A+ T +  +                +++  F ++G+  D     L+++ DL  GS+     F +  L G   E F +  VE +  V
Sbjct:  170 HDHGGSPIPDKGIQSLTKVLHAARDSLGLEFCPLLPDVTCLLLSFM-----------------PESYAYATIRQSAICR----------FAKT---FSDLMARNFPQTHQAMDQIGALTAVGLDPILKRFFVPLLKRKHVLRIMDIYTSEGAHAIFRIGCTLCCLAHAHLDANVLSYCDSPRMWWEGVKRFTHSKYFHFDIFLQQQAYGSRQGSIRVMSRPIFPRSEYVSRLISSNEEWAAENEHHIPILQEMKPIGL--------VEGKCPIVLAKHSPERLSLSKWLPPALQSTRLELIYSSNYHGRSIEMFYRQCSVAIHTVTLLEVFNAGVVLGMYATQTWHNNPSGYGDGECFLFRLTPNPECFKYQVTASLTAKESLDAEEFISTIDDAGQLMISSLNFISMGVGED-GSSALRLNEDLTRGSTSRCINFGHADLIGDSSEVFEVGLVETYRFV 590          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: XP_002180169.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48360.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 103.6 bits (257), Expect = 2.000e-18
Identity = 123/483 (25.47%), Postives = 200/483 (41.41%), Query Frame = 0
Query:   99 DLPLFGA-PAASFHDHPLTREQEAASRRVLNVLGNTLEIDYCPLLLDLVPLLMVIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLATLAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRF--TLCLFKEMKWRLKSMELERAALWWDQLA----DITFSIDFDIDQGLGTVLAQYGTMVK-------RSNLDRLLALRMSDPIERELIVKQDIQ----PLRMHGLGLVAD----VNGSTSILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLY-RMCGNKHPCILI------IEEYKHGHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSW-----ARDA-------TQTVESDMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEK-FGIRHVEVHTIVTQ 540
            D P +G  P    + +  T     A+R+VL  L   L ++Y PLL  +V L +  M                 AE+  +  VR M      Y  T   + LA   AFRD + +   +TA  +   G    + L  IF    + ++    +LRL +++  +G    FRF   L +  +M+   K + +     +WD L     D  F+ DF + +  G     +G +V+       R  L R++ L     IE   +  ++ Q    P+ +    ++ +    V    +     RTY   LA++LPL  R   L +L+S++ HGRSL+  Y  +  +KH  +L       +       ++G Y          V G G  FLFRL+  A  ++W       DA        +T   + F + T+ + ++G  N     GL+++ DL  G S  +  F N PL G G+   F I  VE +    Q
Sbjct:  139 DAPTYGQDPRNPVYINHTTVNGTLAARKVLIALEQILGLEYAPLLPTVVHLCLTNM-----------------AESYAFCTVREMAQSASRYMPTTRREHLAFGKAFRDIVHKLHEKTAEYLEDRGLLDPENLTCIFQNMFIGILPMHLVLRLFDMYTLEGHKVLFRFGVALMVLYKMEAAEKLITISNHVEFWDHLKIWAHDPRFNFDFVVRKAYGV----HGRLVRKQLRFPSRQVLRRIIKLEEQRLIEDGGMDDENPQSAARPVGLVQRNVILEGGEVVKPVLAQSTQARTY---LATWLPLAMRLTNLDLLYSTNYHGRSLERFYSHVKTSKHTFVLCEVLDGSVASNGTPTIVGMYASQAWRASPRVYGDGECFLFRLSPDAECWTWHPIPMTADAGDTFSENNETALLEQFMVGTRTYISMG-GNPDGSCGLRLNEDLTVGESSPAVGFENEPLHGTGRNSVFQIGLVEAYGFTRQ 596          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: XP_002683589.1 (rabGTPase-activating protein [Naegleria gruberi] >EFC50845.1 rabGTPase-activating protein [Naegleria gruberi])

HSP 1 Score: 90.9 bits (224), Expect = 1.300e-14
Identity = 114/490 (23.27%), Postives = 184/490 (37.55%), Query Frame = 0
Query:  122 ASRRVLNVLG-NTLEIDYCPLLLDLVPLLMVIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLATLAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRLLELFLEDGVCFFFRFTLCLFKEMKWRLKSMELERAALWWDQLADITFSIDFDIDQGLGTVLAQYGTMVKRSNLDRLLALRMSDPIERELIVKQDIQPLRMHG--LGLVADVNGSTSILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILII-------------------EEYKHGH--------------------------------------------------------VIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDATQTVESDMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEV 534
            +++R+L VL  + L+IDYCP L DLV LL++IM                +A A  + ++        +YF T   Q    + +F D +++  P   +    +G D        F R  VP +    +LR ++ F+ +G    +R    + K M+ +L  +    +  + +++     S+  D D+   T   ++G  + R  L +L      D   R      +I P ++ G     V     S S +    +  +LL S+L   Q+ R L++ F++ R G SL  LY +C +  P IL+I                   EE    H                                                        V GAYC +  +      GT   FLF +     RY W+R      ++D F +  K     G     D P L++D  L  G+S+   TF N PL G  +  F +  VEV
Sbjct:  452 SAKRILCVLADHHLDIDYCPPLPDLVQLLLIIMN-------------EKQAYATAHCMLEKSR-ESKWYFRTNKMQHALFIESFSDIIKKNIPNLGSHFEKIGFDISTVTYKWFSRLFVPYLPFNFVLRTMDSFINEGAKILYRVAFAVLKTMEPKLLKI---LSPNFMEEILTTNTSLSIDEDEFFKTAF-KFG--ISRKYLTQL------DEKNR-----AEINPAKLTGKMSTFVKPKISSQSEIIKDISQWELLFSWLSYKQKLRTLALRFTTSRDGYSLSQLYSICNDIGPNILLISAVPISLDGDIDDIKKQQKEEKNQPHTQELQISENEEDAMKVIEMIRKHKEQGTSLRKSLKKDPNAKKEAPVEKKKKTADVCVFGAYCGESYDKTYRFEGTTDTFLFSMYPVEARYKWSR------KNDFFVMGRKDRLVFGAGG--DGPALQIDDQLCIGTSNRCTTFDNEPLVG-SKTTFSVLKVEV 901          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: XP_004355692.1 (TLDc domain-containing protein [Cavenderia fasciculata] >EGG17208.1 TLDc domain-containing protein [Cavenderia fasciculata])

HSP 1 Score: 90.5 bits (223), Expect = 1.700e-14
Identity = 61/171 (35.67%), Postives = 88/171 (51.46%), Query Frame = 0
Query:  376 LASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNAVS-GTGVAFLFRLTRPAVR--YSWARDATQTVESDMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEVHTIVTQPNET 544
            L SFLPL        M++S+++HG S+ + +    N+ PCI+ I++   G V GAY  DP N    +  G+G  FLF++   A R  +SW R      ++D F L+TK+ F V M +     GL +D DL  GSS+   TF N PL       F I  +EV + +   N T
Sbjct:  456 LQSFLPLRHNDDVFEMIYSTNKHGISIKTFFSRLYNRSPCIMAIKD-DRGQVFGAYTADPWNTEKKIHYGSGETFLFKINDHANRNKFSWTR------KNDDFMLSTKEAF-VSMGSGGKGVGLWIDEDLFYGSSNRCATFDNEPLA--STTDFKIMELEVWSPLKSKNAT 616          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: GAX72932.1 (hypothetical protein CEUSTIGMA_g387.t1 [Chlamydomonas eustigma])

HSP 1 Score: 88.6 bits (218), Expect = 6.600e-14
Identity = 70/194 (36.08%), Postives = 97/194 (50.00%), Query Frame = 0
Query:  343 QDIQP---LRMHGLGLVADVNGSTSILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDATQTVESDMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEV 534
            +DI P   L +  L L    +G  S + N R +LK +AS +P  QR     + +S+ RHG SL +LYR CG   P +L++ +   G+V G Y  D         GTG  F+F+L    V Y W R  +Q V++D FQ AT    AVG      H  + +D +L  GSS    TF +   C   +E+F I  VEV
Sbjct:  208 EDIVPPKSLIIGDLTLQLASSGEPSQILN-RDHLKAVASAVPPMQRFLTWQLSYSTVRHGISLSTLYRRCGGHTPTLLVVRD-TAGYVFGCYSEDGWKSAPRFYGTGETFVFQLEPHRVMYPW-RSISQ-VKNDFFQYATLDCLAVG---GLGHFAIHLDCELLQGSSSTCGTFGS--PCLSSKEEFRISVVEV 392          
BLAST of NO02G03770 vs. NCBI_GenBank
Match: PRW57748.1 (nuclear receptor coactivator 7-like isoform X2 [Chlorella sorokiniana])

HSP 1 Score: 85.1 bits (209), Expect = 7.300e-13
Identity = 53/162 (32.72%), Postives = 80/162 (49.38%), Query Frame = 0
Query:  372 YLKLLASFLPLHQRQRKLSMLFSSDRHGRSLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNAVSGTGVAFLFRLTRPAVRYSWARDATQTVESDMFQLATKKFFAVGMSNDTDHPGLKVDADLETGSSHYSRTFANLPLCGRGQEKFGIRHVEV 534
            +++ LA+ +P   RQ + ++L+S+ R G SL +L R  G + P +L++ +++  HV GAYC +P        GTG  F+F L                  +D FQ  + +  AVG S       L +DADL  G S    TF N  L   GQE+F +  VE+
Sbjct:  228 HVRALAAAVPARYRQARWTLLYSTARDGISLQTLLRNAGRRAPTVLVVRDFQR-HVFGAYCSEPWRLDKRFFGTGETFVFTLEPRRAXXXXXXXXXAKEHNDYFQFCSNEAIAVGGSGGY---ALWLDADLTRGLSRNCTTFGNSSLA--GQEEFQVGTVEL 383          
The following BLAST results are available for this feature:
BLAST of NO02G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30302.13.200e-21069.94tld family protein [Nannochloropsis gaditana][more]
EJK75675.11.500e-2926.98hypothetical protein THAOC_02595, partial [Thalass... [more]
CBN79288.14.500e-2325.10conserved unknown protein [Ectocarpus siliculosus][more]
XP_002291229.15.900e-2327.33predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK43791.15.000e-2224.35hypothetical protein THAOC_37732 [Thalassiosira oc... [more]
XP_002180169.12.000e-1825.47predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002683589.11.300e-1423.27rabGTPase-activating protein [Naegleria gruberi] >... [more]
XP_004355692.11.700e-1435.67TLDc domain-containing protein [Cavenderia fascicu... [more]
GAX72932.16.600e-1436.08hypothetical protein CEUSTIGMA_g387.t1 [Chlamydomo... [more]
PRW57748.17.300e-1332.72nuclear receptor coactivator 7-like isoform X2 [Ch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007036NSK007036Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03770.1NO02G03770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574823gene_967Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g98gene373Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03770.1NO02G03770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03770 ID=NO02G03770|Name=NO02G03770|organism=Nannochloropsis oceanica|type=gene|length=1635bp
ATGCCAACCTTGAGCCCAGCGCTGGTATCCCCACGGAGCTCTGTCGCCGG
CAGGCAAACCACAGACGCAGGCTCCCCTTCTTTACCCACCCCTTCCACTG
TGTCGCCCGACAAGACGGCGTTGCGGTGGCTGGAGACCAGTGCCACACGC
CCCAAGCTCTACCACGCACCGGAGCGACTGGGTGCGGGCCATTATCATCA
TGCACACCACGAGATTCTAACGCCCGACCACGCTCAGCGGCAATACACGC
TCATTATGCAGGACTTGAGTAAGAAGGATCCAGAATGGCTGGATGACCTG
CCGCTTTTTGGTGCGCCCGCTGCCTCGTTTCACGACCATCCCTTGACGCG
GGAGCAGGAAGCTGCAAGCCGGCGGGTCTTGAATGTGTTGGGTAACACGT
TGGAAATTGACTACTGTCCACTCCTTTTAGACTTGGTTCCTCTCTTAATG
GTGATCATGGAGACTTGCGAGTCCTCTTCAGTGCCGGCCGGCTCTGCCGC
GGCCTTGCGCGCTGAGGCAGTGGTGTACGCAGTGGTGCGCAACATGCATC
TGCATCGTCCTTTTTATTTTGGTACGGGCCATCATCAATTTCTTGCGACA
CTGGCTGCGTTTCGCGACTACATGCGCAGGTACTTTCCTGAAACAGCAGC
GTGCATGGCGGCAGTGGGGGCTGATACGGAGGACTGGCTCGGCGTTATCT
TTTATAGATGCCTAGTGCCTTTGGTTGCTCATCGGGATTTGCTACGCCTT
CTCGAACTTTTTTTGGAGGACGGTGTGTGTTTCTTTTTCAGGTTTACCTT
ATGTTTGTTCAAAGAGATGAAGTGGAGGCTCAAAAGCATGGAGCTGGAGA
GAGCGGCTTTATGGTGGGATCAGCTTGCTGATATTACTTTTAGCATTGAC
TTTGACATCGACCAAGGACTTGGTACAGTATTGGCTCAATATGGGACGAT
GGTCAAGCGGAGCAACCTTGATCGTCTGCTTGCCCTCCGGATGAGTGACC
CCATCGAACGAGAGCTGATCGTGAAACAAGACATCCAACCCTTACGAATG
CATGGCCTTGGTCTAGTAGCGGATGTGAATGGCAGCACCAGCATACTGCA
CAACAAGCGCACCTATCTCAAGCTCCTAGCCAGTTTTCTTCCCCTCCACC
AACGCCAACGCAAGCTGAGCATGCTCTTCTCCAGTGACCGGCACGGGCGT
AGCCTCGACTCATTGTATCGCATGTGTGGAAATAAGCACCCATGCATCCT
CATTATTGAAGAATACAAGCACGGACATGTCATTGGTGCTTACTGTCCTG
ATCCCATCAATCCTGGCAACGCGGTAAGCGGGACAGGCGTTGCCTTTCTT
TTTCGGTTGACAAGACCAGCGGTGCGGTACAGCTGGGCAAGAGATGCCAC
GCAGACGGTGGAGTCGGACATGTTCCAATTGGCAACGAAAAAATTCTTTG
CAGTAGGCATGAGCAATGATACGGACCATCCTGGGTTGAAAGTGGATGCA
GATTTGGAGACGGGAAGTAGTCACTATTCCCGGACATTCGCGAATTTGCC
TTTGTGTGGCCGGGGACAGGAGAAATTTGGAATTCGACATGTGGAGGTCC
ACACCATTGTGACGCAGCCTAATGAGACAGATTAA
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protein sequence of NO02G03770.1

>NO02G03770.1-protein ID=NO02G03770.1-protein|Name=NO02G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=545bp
MPTLSPALVSPRSSVAGRQTTDAGSPSLPTPSTVSPDKTALRWLETSATR
PKLYHAPERLGAGHYHHAHHEILTPDHAQRQYTLIMQDLSKKDPEWLDDL
PLFGAPAASFHDHPLTREQEAASRRVLNVLGNTLEIDYCPLLLDLVPLLM
VIMETCESSSVPAGSAAALRAEAVVYAVVRNMHLHRPFYFGTGHHQFLAT
LAAFRDYMRRYFPETAACMAAVGADTEDWLGVIFYRCLVPLVAHRDLLRL
LELFLEDGVCFFFRFTLCLFKEMKWRLKSMELERAALWWDQLADITFSID
FDIDQGLGTVLAQYGTMVKRSNLDRLLALRMSDPIERELIVKQDIQPLRM
HGLGLVADVNGSTSILHNKRTYLKLLASFLPLHQRQRKLSMLFSSDRHGR
SLDSLYRMCGNKHPCILIIEEYKHGHVIGAYCPDPINPGNAVSGTGVAFL
FRLTRPAVRYSWARDATQTVESDMFQLATKKFFAVGMSNDTDHPGLKVDA
DLETGSSHYSRTFANLPLCGRGQEKFGIRHVEVHTIVTQPNETD*
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Synonyms
Publications