NO02G03750, NO02G03750 (gene) Nannochloropsis oceanica

Overview
NameNO02G03750
Unique NameNO02G03750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1533
Alignment locationchr2:1014608..1016140 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1014608..1016140 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO02G03750 vs. NCBI_GenBank
Match: EWM30227.1 (hypothetical protein Naga_100003g100 [Nannochloropsis gaditana])

HSP 1 Score: 302.4 bits (773), Expect = 2.700e-78
Identity = 153/183 (83.61%), Postives = 162/183 (88.52%), Query Frame = 0
Query:  321 KPGKAKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNSAVGTKHGKDSASGQVAPEVLRRQQEYLGPGGQVVGNPLLPPWMLPPTADASMEGGEGIQGGDGHSNSS 504
            K GK KNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQA++DRLS +EIERSRQELAELERRFLERVAQTNRCKNS  G+KHGKDSA+GQVAPEV RRQQEYLGP G++VGNP+LPPWMLPP A A+ EG          SN S
Sbjct:  372 KAGKVKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPAAQAANEGEPASASTTPRSNCS 554          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: CBN74822.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 196.8 bits (499), Expect = 1.600e-46
Identity = 110/163 (67.48%), Postives = 119/163 (73.01%), Query Frame = 0
Query:  324 KAKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNSA-VGTKHGKDSASGQVAPEVLRRQQEYLGPGGQVVGNPLLPPWMLPPTADA 486
            K  NGLRRGKWT EEE YANRLI EFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR QA+MDRL P +IERSR +LA+LERRFLERVA TNRCK    +G+K G  S       ++LR  Q            P   PWMLPP+  A
Sbjct:  258 KKPNGLRRGKWTSEEEDYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-QADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIGSKEGGSSF------DLLRPNQP----------PPATQPWMLPPSPPA 403          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: XP_002176339.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42575.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 192.2 bits (487), Expect = 4.000e-45
Identity = 106/162 (65.43%), Postives = 121/162 (74.69%), Query Frame = 0
Query:  322 PGKAKNG--LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNSAVGTKHGKDSASGQVAPEVLRRQQEYLGPGGQVVGNPLLPPWMLPP 482
            P   K G  LRRGKWTPEEEAYANRLI+EFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR  A+++RL+PE+I++SR EL+ELERRFLERVAQTNR K+S VG        +   APE +   +  +         P  PPW+ PP
Sbjct:   46 PNNKKKGPPLRRGKWTPEEEAYANRLILEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-TADLNRLTPEQIQQSRAELSELERRFLERVAQTNRVKSSGVG-------GAASAAPEAIIMGRPKI---EHETMEPPSPPWLQPP 196          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: XP_009035229.1 (hypothetical protein AURANDRAFT_62630 [Aureococcus anophagefferens] >EGB10431.1 hypothetical protein AURANDRAFT_62630 [Aureococcus anophagefferens])

HSP 1 Score: 187.2 bits (474), Expect = 1.300e-43
Identity = 107/175 (61.14%), Postives = 123/175 (70.29%), Query Frame = 0
Query:  324 KAKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNSAVGTKHGKDSASGQVAPEVLRRQQEYLGPGGQVVGNPLLPPWMLPPTADASMEGGEGIQGGDG 499
            + +NGLRRGKWT EEEAYANRLI EFK GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR QA+MDRL+P++I+RSR ELAELERRFL RVAQ++R   S            G+     L + Q+           P+L PW+LPP A A   G   ++ G G
Sbjct:  586 RRENGLRRGKWTVEEEAYANRLIHEFKLGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-QADMDRLTPDDIKRSRYELAELERRFLTRVAQSHRSAKSGGXXXXXXXXGDGKALGGGLMQAQQ----------RPMLAPWLLPPHAAA---GAPTVRAGAG 746          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: OEU18271.1 (hypothetical protein FRACYDRAFT_260330 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 180.3 bits (456), Expect = 1.600e-41
Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = 0
Query:  329 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNS 436
            LRRGKWTPEEEAYANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR  A+++RL+PE+I++SR EL++LERRFLERVAQTNR KNS
Sbjct:   47 LRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-TADLNRLTPEQIQKSRAELSDLERRFLERVAQTNRVKNS 152          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: GAX25300.1 (hypothetical protein FisN_5Lh386 [Fistulifera solaris])

HSP 1 Score: 179.1 bits (453), Expect = 3.500e-41
Identity = 91/108 (84.26%), Postives = 101/108 (93.52%), Query Frame = 0
Query:  331 RGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNSAVG 439
            RGKWTPEEEAYANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR  A+++RL+PE+I++SR EL+ELERRFLERVAQTNR K+S VG
Sbjct:   77 RGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGGNCIGKQVFRRR-TADLNRLTPEQIQKSRAELSELERRFLERVAQTNRVKSSGVG 183          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: GAX17004.1 (hypothetical protein FisN_5Hh386 [Fistulifera solaris])

HSP 1 Score: 173.3 bits (438), Expect = 1.900e-39
Identity = 88/104 (84.62%), Postives = 98/104 (94.23%), Query Frame = 0
Query:  332 GKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNS 436
            GKWTPEEEAYANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR  A+++RL+PE+I++SR EL+ELERRFLERVAQTNR K+S
Sbjct:   79 GKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGGNCIGKQVFRRR-TADLNRLTPEQIQKSRAELSELERRFLERVAQTNRVKSS 181          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: CBN73986.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-35
Identity = 82/104 (78.85%), Postives = 91/104 (87.50%), Query Frame = 0
Query:  328 GLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDR--LSPEEIERSRQELAELERRFLERVAQT 430
            GLRRGKWTPEEE YANRLI EFK+GLLPLTDGTTLRTFLS +LNCDPMRISKKFVG NCIGKQVFRR+Q  + D   LS E +++SR ELAELER+FLERVA+T
Sbjct:  115 GLRRGKWTPEEEKYANRLIQEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFVGSNCIGKQVFRRQQGVDEDSSPLSEEAMDKSRAELAELERKFLERVAET 218          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: XP_002287087.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96728.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 156.0 bits (393), Expect = 3.100e-34
Identity = 81/120 (67.50%), Postives = 97/120 (80.83%), Query Frame = 0
Query:  329 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAELERRFLERVAQTNRCKNSAVGTKHGKDSASG 449
            LRRGKWT EEEAYA+RLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR  A+++ L+P +I+++R EL+ELE+RFL+RV+Q  +   S    +      SG
Sbjct:  116 LRRGKWTAEEEAYASRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-GADVNNLTPAQIQQTRLELSELEKRFLDRVSQNKKSGGSPKSERPASKPQSG 234          
BLAST of NO02G03750 vs. NCBI_GenBank
Match: EJK68601.1 (hypothetical protein THAOC_10204 [Thalassiosira oceanica])

HSP 1 Score: 134.4 bits (337), Expect = 9.800e-28
Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 0
Query:  324 KAKNG--LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEMDRLSPEEIERSRQELAE 418
            K K G  LRRGKWT EEEAYA RLI EFKSGLLPLTDGTTLR FLSKLLNCDPMRISKKFVG NCIGKQVFRR+  A+++ L+P +I + R EL+E
Sbjct:  169 KKKGGQPLRRGKWTTEEEAYAARLIHEFKSGLLPLTDGTTLRNFLSKLLNCDPMRISKKFVGNNCIGKQVFRRK-VADINSLTPAQISQIRVELSE 263          
The following BLAST results are available for this feature:
BLAST of NO02G03750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30227.12.700e-7883.61hypothetical protein Naga_100003g100 [Nannochlorop... [more]
CBN74822.11.600e-4667.48conserved unknown protein [Ectocarpus siliculosus][more]
XP_002176339.14.000e-4565.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009035229.11.300e-4361.14hypothetical protein AURANDRAFT_62630 [Aureococcus... [more]
OEU18271.11.600e-4185.05hypothetical protein FRACYDRAFT_260330 [Fragilario... [more]
GAX25300.13.500e-4184.26hypothetical protein FisN_5Lh386 [Fistulifera sola... [more]
GAX17004.11.900e-3984.62hypothetical protein FisN_5Hh386 [Fistulifera sola... [more]
CBN73986.13.700e-3578.85conserved unknown protein [Ectocarpus siliculosus][more]
XP_002287087.13.100e-3467.50predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK68601.19.800e-2875.00hypothetical protein THAOC_10204 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007035NSK007035Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03750.1NO02G03750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627370gene_966Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g100gene372Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03750.1NO02G03750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03750 ID=NO02G03750|Name=NO02G03750|organism=Nannochloropsis oceanica|type=gene|length=1533bp
ATGGGGATGCCTAGCAACCGAAGCGGGCCAGGAAACAATAGTGACAGCAC
CATCACCCCCAGCACTAGCACGAGCACTATGTCAGCCACTCCATCGGGGC
CGTCCTTTAAGGTGGACACCAACAAGACCGCTGCCGGGGCCGCACTGGGG
CCCCCACCGGCCTCGGTCAACACGGCCACAGCGGGCGCAGCAGGTTGTGC
ATCCTCCACCCTTAATGGCATCAGCAGCCATGGTAACGGCAACAGCAGCA
GCAACACACATCACAGGTCCGCCAAGCTGCACGATGGGGCAGCCCGCATT
GCCAATACGACGACGACCACCACTAGCAAAATAAAAGTGGAGGAACCAAC
CAACGGTGGTGGAAGCATGGAGGCCGCATCAGCGGCGGTCGATGGCAAGG
ACGCTCTCATTCAGCATGAACTCAATGCGCTACTCAGCCAAAAGCGTGAC
GCCGCTGCTGATGGCCGTAGCCAAGATTCCTCCCCTGCCTCATCCACTTC
CTCCACCCCAACGACCGCCCCATCCATGATGCCTACGACCATGAACGCCC
CTCTCTTCAAACCTTCTCCTACTGCTGCTGCTTCTTTGTCTTCGTCACCA
GCAGTGCCAACCACCGGAGGAGGAGCAGGGAAAGGGCTTATGCAAGTCGC
TGCCTCCAGACCCCTCCCTACCTCATCGTCGTCGTCCGCAACAGCGCAGG
CCCCCCTGGCCGCCACGCGGCATTCGACGAGAGGCGCAACGGCGGCGGCA
GCAGCAGCGGGGATCAGCAAGTCCATTGAGGAGGCCTGTCATGCCGCTGC
CCTAGAAGATGGTGTGCTTGGATCCAAAGGAGGGGGGGGCGGGGGAGCGG
TAGGAGGAGGTGGTGGAGGAGGGGCAGGACATGGCCATGCCAAGCAAGGT
GGGGGAGGAATTGGTAATGGAGGCGTATCGTCGTCAACGGCAGCTAGTAA
TGGCAGTGGGAAACCGGGGAAGGCTAAGAATGGATTGAGGAGAGGGAAAT
GGACGCCGGAGGAGGAGGCGTATGCAAATCGATTAATCGTGGAATTCAAG
TCGGGGTTGTTGCCATTGACGGATGGTACGACATTGAGGACATTTTTGAG
TAAGCTGCTTAATTGTGATCCTATGAGGATAAGCAAAAAATTTGTGGGTC
AGAATTGCATCGGAAAGCAAGTGTTTCGTCGGCGGCAGCAAGCAGAGATG
GACAGGTTGTCCCCTGAAGAGATTGAACGGAGTCGACAAGAACTTGCCGA
ACTAGAGAGACGATTTTTGGAGCGCGTGGCTCAGACAAATCGATGTAAGA
ATTCTGCTGTGGGGACGAAGCATGGGAAAGACTCGGCGTCGGGTCAGGTG
GCGCCGGAGGTGTTGCGACGACAGCAAGAGTACCTGGGCCCAGGTGGGCA
GGTGGTGGGTAATCCCCTCCTCCCCCCCTGGATGCTCCCTCCCACCGCGG
ATGCATCGATGGAGGGAGGGGAGGGCATTCAAGGTGGAGATGGTCATTCG
AATTCCTCGCCAGAGAGGGGGGGATGGGGATGA
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protein sequence of NO02G03750.1

>NO02G03750.1-protein ID=NO02G03750.1-protein|Name=NO02G03750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=511bp
MGMPSNRSGPGNNSDSTITPSTSTSTMSATPSGPSFKVDTNKTAAGAALG
PPPASVNTATAGAAGCASSTLNGISSHGNGNSSSNTHHRSAKLHDGAARI
ANTTTTTTSKIKVEEPTNGGGSMEAASAAVDGKDALIQHELNALLSQKRD
AAADGRSQDSSPASSTSSTPTTAPSMMPTTMNAPLFKPSPTAAASLSSSP
AVPTTGGGAGKGLMQVAASRPLPTSSSSSATAQAPLAATRHSTRGATAAA
AAAGISKSIEEACHAAALEDGVLGSKGGGGGGAVGGGGGGGAGHGHAKQG
GGGIGNGGVSSSTAASNGSGKPGKAKNGLRRGKWTPEEEAYANRLIVEFK
SGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQAEM
DRLSPEEIERSRQELAELERRFLERVAQTNRCKNSAVGTKHGKDSASGQV
APEVLRRQQEYLGPGGQVVGNPLLPPWMLPPTADASMEGGEGIQGGDGHS
NSSPERGGWG*
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Synonyms
Publications