NO02G03480, NO02G03480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03480 vs. NCBI_GenBank
Match: EWM30349.1 (small-conductance mechanosensitive channel [Nannochloropsis gaditana]) HSP 1 Score: 786.9 bits (2031), Expect = 3.200e-224 Identity = 389/430 (90.47%), Postives = 408/430 (94.88%), Query Frame = 0 Query: 1 MLFGWLFKPKAAPPVARKGPLTVLILDPVRRAIELFPNTKAVVEQVWNVLPLALRALINPRDLLLFLTTRLLYRKACRALHAFHQFLWKRGGILDEPRPYEDSVLGFMEPKLGTLTSFIGVTYIINVVLSLLVDIGWRVRADSGRLMASLLYIAYGAYFVNEVKKQYLTSWVPSLQEDRRRSYIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVPKELGQSLITGVVDYQNELEQVA 431 M W PK A PV RKG L+ L+LDPVRRA+ELFPN+K V++QVW +LPLALRALINP DLLLF+TTRLLYRKACRALHAFH FLWKR GI+DEPR YEDSVLGFMEPKLGTLTSFIGVTY+INVVLSLL+DIGWRVRADS RLMASLLYIAYGAYFVNEVKK+YLT+WVPSLQEDRRRSYIIDRSSSVVLWILA FSCIEC+S+FLK+PLSSTLAFGG GGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFE SF+LR+QDFETLPE+ILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLV KELGQSLITGVVDYQNELEQVA Sbjct: 143 MRIDWFSGPKIAEPVPRKGALSSLVLDPVRRAVELFPNSKGVIDQVWTMLPLALRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKELGQSLITGVVDYQNELEQVA 572
BLAST of NO02G03480 vs. NCBI_GenBank
Match: CBJ28084.1 (Small Conductance Mechanosensitive Ion channel [Ectocarpus siliculosus]) HSP 1 Score: 355.9 bits (912), Expect = 1.800e-94 Identity = 185/401 (46.13%), Postives = 260/401 (64.84%), Query Frame = 0 Query: 45 QVWNVLPL---------ALRALINPRDLLLFLTTRLLYRKACRALHAFHQFLWKRGGILDEPRPYEDSVLGFMEPKLGTLTSFIGVTYIINVVLSLLVDIGWRVRADSGRLMASLLYIAYGAYFVNEVKKQYLTSWVPSLQEDRRRSYIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL-VPKELGQSLITGVVDYQNELEQVAAGQGG 436 Q+W++ L L ++ P+ L LFL +++YR+ R L+ +W+ D P+PYE SVLGF+EP+L TL+ + V Y + + +L+ GW ++++ ++Y Y YFV+E K+ +L W+PSL+ D+R+ +I +RS SV+ W + + E +S++L++P++STLAFGG GGLA GLA KDV+SNFFGG+MLL EPF PGDMV+F G EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LRY D + EI+ IK AL+ +P +D+LSPFRVH F L + CYFATKS DE+LYLQQ+AL+E+TRVV ++D+ P +G+ + G++ N + Q G Sbjct: 10 QLWSIAGLKAAGARFWGPLTNVVTPQKLFLFLLFQIVYRRLLRLLYRLQVQVWRLVRKHD-PQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMT-SVLYVDMNNPAPIGKVPLAGMI---NSAQNKGVAQSG 405
BLAST of NO02G03480 vs. NCBI_GenBank
Match: WP_020583552.1 (hypothetical protein [Endozoicomonas elysicola]) HSP 1 Score: 149.1 bits (375), Expect = 3.300e-32 Identity = 92/261 (35.25%), Postives = 139/261 (53.26%), Query Frame = 0 Query: 146 LMASLLYIAYGAYFVNEV--KKQYLTSWVPSLQEDRRRSYIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHL 405 L+ +L + Y A+F+ EV + L + R +I RS +++ I S ++ LS+ LAFGG GG+ GLA+KD ++NFFGG+ML+ PFT GD + R EG VE+VG+ T++R D RP YVPNS+F +V N R+ +RR +F LRY+DFE +P I+ I + L+++ +VD P F ++ L + +L +Q+ L+ I + VTE G FAYPT + Sbjct: 83 LIQKILLVVYPAWFIWEVSLNMEGLLNTADGRWAGRLSYSVIARSIQLLIVITTLLS----LAQVFGYRLSTLLAFGGIGGIILGLAAKDWLANFFGGLMLMLDRPFTEGDWIRSPDRA--IEGHVEKVGWRLTKIRTFDRRPIYVPNSIFTGIVVENATRMRNRRMVENFYLRYEDFEKIPNILRRIDELLQLVSEVDNKEPHYAVFIRYDDSALLCQVRAHITRTDRVGFLKVQESILLLIAKAVTEAGASFAYPTRRI 337
BLAST of NO02G03480 vs. NCBI_GenBank
Match: WP_093272972.1 (mechanosensitive ion channel family protein [Vibrio xiamenensis] >SDH18729.1 MscS family membrane protein [Vibrio xiamenensis]) HSP 1 Score: 147.9 bits (372), Expect = 7.500e-32 Identity = 99/288 (34.38%), Postives = 148/288 (51.39%), Query Frame = 0 Query: 127 VVLSLLVDIGWRVRADSGRLMASLLYIAYGAYFVNEVKKQYLTSWVPSLQEDRRRSYIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVPKELGQS 415 + L L++ ++ D + LL IA +FV + + S V + + +R + S V+ T + + + SF + LS L FGG GGL GLA+KD++SNFFGG+M+ F PF GD V R + EG VER+G+ T +R D RP YVPNSVF + +V N R+ +RR + +RY D E L +I+ EIKK L+ P +D V+F FG L + + T + Y ++Q L++I ++ AYPT + L P+ G S Sbjct: 78 ISLGFLLEGHFKTTLDWLSTLKLLLVIAVCVWFVLRLVTN-VESHV--IAQQKRDETTVQAVSKVIRLFFVTIAVLTIMQSF-GLSLSGLLTFGGVGGLIVGLAAKDLLSNFFGGMMIYFDRPFKVGDWVRSPDR--NIEGTVERIGWRMTIIRTFDKRPLYVPNSVFSNIVVENPSRMLNRRIYETIGIRYDDSEVLSDIVHEIKKMLKNHPDIDTKQTLIVNFNGFGPSSLDMMVYTFTKTVNWIRYHEVKQDVLIKIMDIINAHNASIAYPTQTIKLAPEHAGMS 359
BLAST of NO02G03480 vs. NCBI_GenBank
Match: XP_005538462.1 (similar to small conductance mechanosensitive ion channel [Cyanidioschyzon merolae strain 10D] >BAM82426.1 similar to small conductance mechanosensitive ion channel [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 146.7 bits (369), Expect = 1.700e-31 Identity = 84/242 (34.71%), Postives = 132/242 (54.55%), Query Frame = 0 Query: 170 SWVPSLQEDRRRS--YIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVL-SPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVP 409 +W +ED S +++ R +V+++ +A +E +PL S LAFGG GGLA GLA++++ NF G+ML PF PG+ V T G G+V ++GFY+T L G D RP ++PN+ ++ +TN RIT+RR F LRYQD + + I+ +++ L +P++ V FT+F Y L + SC +L +QQ L+E+ R+V FA PT ++ +P Sbjct: 224 NWFLYEREDLSLSQIFVLGRLGTVLIYAVAFLVFVETTG----LPLRSILAFGGIGGLAVGLATQELAKNFISGIMLALGAPFAPGESVQLNTLGV--SGQVRQIGFYKTELIGADGRPIWIPNAQLLNERLTNNSRITNRRINLRFGLRYQDIDKIGRIVERVREMLAEVPEIAAYRESISVFFTEFAEYSLPIQLSCIVNVTDGRRFLEIQQQVLIELNRIVKSELADFALPTRAIEYLP 459
BLAST of NO02G03480 vs. NCBI_GenBank
Match: WP_051230095.1 (mechanosensitive ion channel family protein [Haliea salexigens]) HSP 1 Score: 146.7 bits (369), Expect = 1.700e-31 Identity = 86/226 (38.05%), Postives = 125/226 (55.31%), Query Frame = 0 Query: 191 VVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYP--TTHLDLVPKELGQS 415 V+LWILA ++ V V +S LAFGG GG+A G A+KD+++NFFGG+ + PFTPGD + R EG VE +G+ TR+R D RP YVPN+VF V N R+ +RR + LRYQD L +I+ ++++ L P +D+ V+F FG L + T EY ++Q L++ R++ + G A+P T HLD P EL ++ Sbjct: 146 VILWILAGLMALQSVG----VSISGLLAFGGIGGIAVGFAAKDLMANFFGGMSIYLDRPFTPGDWIRSPDR--EIEGTVEDIGWRLTRIRTFDQRPLYVPNAVFTQISVENPSRMFNRRIYETIGLRYQDSGKLADIVSDVRQMLENHPDIDLNRTLIVNFVSFGPSSLDFFIYTFTRTTVWVEYHAIKQDVLLQALRIIHDHGADVAFPTRTLHLDSAPPELARA 365
BLAST of NO02G03480 vs. NCBI_GenBank
Match: WP_105729365.1 (mechanosensitive ion channel family protein [Malikia spinosa] >PRD69075.1 mechanosensitive ion channel protein MscS [Malikia spinosa]) HSP 1 Score: 146.4 bits (368), Expect = 2.200e-31 Identity = 91/282 (32.27%), Postives = 142/282 (50.35%), Query Frame = 0 Query: 125 INVVLSLLVDIGWRVRADSGRLMASLLYIAYGAYFVNEVKKQYLTSWVPSLQEDRRRSYIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 407 I++ +LL +G D + +++I GA F+ + + + + + ++ + +L + + + L +S LAFGG GG+A G ASKD++SNFFGG+ML +PF GD + R EG VE +G+ TR+R D RP Y+PNS+F +V N R+T+RR + +RY+D E + I I++ LR P++D VHFT +G L C T +Y +++ L+ I +V E G FAYPT L L Sbjct: 74 ISIAATLLKQVGPNAFLDLLPELRRVVFIFIGALFLTRLISHLEVNLLDPARVSKPMDQTTAKAVAKLLRLSVIITAVLVALQTLGYSVSGVLAFGGIGGVAVGFASKDLLSNFFGGLMLYLDKPFKVGDWIRSPDRA--IEGTVEDIGWRLTRIRTFDKRPLYIPNSMFASIVVENPSRMTNRRISENLGIRYEDGERMAPICSAIRQMLREHPEIDQAQTQIVHFTSYGQSHLEFMVYCLTRTTEWVKYHAVKEDVLLRIMAIVREHGAEFAYPTQTLHL 353
BLAST of NO02G03480 vs. NCBI_GenBank
Match: SMA49970.1 (Low conductance mechanosensitive channel YnaI [Parendozoicomonas haliclonae]) HSP 1 Score: 146.0 bits (367), Expect = 2.800e-31 Identity = 90/245 (36.73%), Postives = 134/245 (54.69%), Query Frame = 0 Query: 166 QYLTSWVPSLQEDRRRSYIIDRSS-SVVLWILATFSCIECVSSFLK---VPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 407 +YL S +E R +DRSS +++ +L I + L+ V +S LAFGG GGLA GLA+KD+++N FGG+ L PF GD V+ +G EG VE +G+ QTR+RG D P YVPN++F + V N R+ +RR + +RY+DF+ L + I+ L ++D + HFT +G L++ Y T D Y+ L+ L+ I +++ E G FA+PT LDL Sbjct: 112 RYLKMVRDSFEETERAQLKMDRSSVELMIKLLQLGISIATALTLLQNTGVSISGLLAFGGVGGLAVGLAAKDMLANLFGGLTLYMDRPFVVGDKVNLKEKGV--EGFVEHIGWRQTRIRGYDRTPIYVPNALFTNIAVINPSRMQNRRVDMYLGIRYKDFDRLEAVTTAIRNYLSGHEQLDHIRGCLAHFTDYGDSSLNIRIRFYTLTTLWDNYMNLRHEILIHIGQIIHEHGADFAFPTRTLDL 354
BLAST of NO02G03480 vs. NCBI_GenBank
Match: WP_087112417.1 (mechanosensitive ion channel family protein [Parendozoicomonas haliclonae]) HSP 1 Score: 146.0 bits (367), Expect = 2.800e-31 Identity = 90/245 (36.73%), Postives = 134/245 (54.69%), Query Frame = 0 Query: 166 QYLTSWVPSLQEDRRRSYIIDRSS-SVVLWILATFSCIECVSSFLK---VPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 407 +YL S +E R +DRSS +++ +L I + L+ V +S LAFGG GGLA GLA+KD+++N FGG+ L PF GD V+ +G EG VE +G+ QTR+RG D P YVPN++F + V N R+ +RR + +RY+DF+ L + I+ L ++D + HFT +G L++ Y T D Y+ L+ L+ I +++ E G FA+PT LDL Sbjct: 122 RYLKMVRDSFEETERAQLKMDRSSVELMIKLLQLGISIATALTLLQNTGVSISGLLAFGGVGGLAVGLAAKDMLANLFGGLTLYMDRPFVVGDKVNLKEKGV--EGFVEHIGWRQTRIRGYDRTPIYVPNALFTNIAVINPSRMQNRRVDMYLGIRYKDFDRLEAVTTAIRNYLSGHEQLDHIRGCLAHFTDYGDSSLNIRIRFYTLTTLWDNYMNLRHEILIHIGQIIHEHGADFAFPTRTLDL 364
BLAST of NO02G03480 vs. NCBI_GenBank
Match: KEQ15053.1 (mechanosensitive ion channel protein MscS [Endozoicomonas numazuensis]) HSP 1 Score: 145.2 bits (365), Expect = 4.800e-31 Identity = 100/325 (30.77%), Postives = 167/325 (51.38%), Query Frame = 0 Query: 92 GILDEPRPYEDSVLGFMEPKLGTLTSFIGVTYIINVVL----SLLVDIGWRVRADSGRLMASLLYIAYG-AYFVNEVKKQYLTSWVPSLQEDRRRSYIIDRSSSVVLWILATFSCIECVSSFLKVPLSSTLAFGGFGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFETSFTLRYQDFETLPEIILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVPKEL 412 G+ P++D+V+ + + L IGV + ++VV S+L+D + R + + + + F+ ++++ +L P+L ++ + ++ I+ +CI V L +S LAFGG GGLA G A+KD+++NFFGG+M+ +PF GD + + + EG VE +G+ QTR+R D RP YVPN+ F + V N R+ +RR + + +RYQD L II EIK+ L ++ V+F FG+ L C+ T EY ++Q L++I ++ A+PT LDL P+E+ Sbjct: 45 GVRATRTPWDDAVIRALRKPVTLLIWIIGVCWSVDVVSKATDSVLID-----GLSNLRDVIIITLVGWSIVRFIRQIERNFLN---PTLTGNKPNDPTTVVAIGRLIRIVVIITCILVVLQSLGYSISGLLAFGGVGGLAVGFAAKDMLANFFGGLMIYLDKPFRVGDWI--RSPDQNIEGTVEYIGWRQTRIRTFDKRPLYVPNATFTNISVENPSRMENRRIKETIGIRYQDGNKLEAIIAEIKQYLHDNEEITKDKILMVNFNSFGASSLDFFIYCFTRTTDWAEYHRVKQNVLVKIMNIIHSHDADIAFPTQTLDL-PEEM 358 The following BLAST results are available for this feature:
BLAST of NO02G03480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03480 ID=NO02G03480|Name=NO02G03480|organism=Nannochloropsis oceanica|type=gene|length=1335bpback to top protein sequence of NO02G03480.1 >NO02G03480.1-protein ID=NO02G03480.1-protein|Name=NO02G03480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top Synonyms
Publications
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