NO02G03330, NO02G03330 (gene) Nannochloropsis oceanica

Overview
NameNO02G03330
Unique NameNO02G03330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length993
Alignment locationchr2:895208..896200 -

Link to JBrowse

Properties
Property NameValue
DescriptionInosine triphosphate pyrophosphatase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:895208..896200 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0047429nucleoside-triphosphate diphosphatase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009143nucleoside triphosphate catabolic process
GO:0009058biosynthetic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029001ITPase-like_fam
IPR002637Ham1p-like
Homology
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: EWM30212.1 (inosine triphosphate pyrophosphatase [Nannochloropsis gaditana])

HSP 1 Score: 292.7 bits (748), Expect = 1.200e-75
Identity = 138/175 (78.86%), Postives = 155/175 (88.57%), Query Frame = 0 
Query:   73 RAVIKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHR 248
            R  +KF+TSNPLKTREVQALLAEGGL+VPFDI TLDI+LPELQE+PLVIAIEKTRLA+  V+ P LVEDT LC +ALG LPGPYIKHFLD+LG  GLF+M+E YED SA+A+CNVGFSPGPG QP+IFTGITYGEIV PEE D+GFGWDTCF PSGF +TFSKMTV +KNAISHR
Sbjct:   86 RLEVKFLTSNPLKTREVQALLAEGGLQVPFDIVTLDIELPELQETPLVIAIEKTRLAAQAVQGPVLVEDTCLCFDALGDLPGPYIKHFLDQLGPEGLFRMIENYEDHSAKAVCNVGFSPGPGCQPLIFTGITYGEIVRPEEGDDGFGWDTCFAPSGFNSTFSKMTVEQKNAISHR 260
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_005789505.1 (hypothetical protein EMIHUDRAFT_447001 [Emiliania huxleyi CCMP1516] >XP_005793101.1 hypothetical protein EMIHUDRAFT_439540 [Emiliania huxleyi CCMP1516] >EOD37076.1 hypothetical protein EMIHUDRAFT_447001 [Emiliania huxleyi CCMP1516] >EOD40672.1 hypothetical protein EMIHUDRAFT_439540 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 179.5 bits (454), Expect = 1.400e-41
Identity = 95/195 (48.72%), Postives = 123/195 (63.08%), Query Frame = 0 
Query:   70 SQKRAVIKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIADNWGE 265
            S  R V+ F+T N  K  EV+A+L  GG  +P  I +  + LPELQ  P  I+ EK RLA+ +V  P  VEDTSLC NALGGLPGPYIK FL++ G  GL  ++ AY D+SA A C  GFS GPGQ P+ F G T G+IV P      FGWD  F+P G++ T+++M   EKN ISHR  AL + Q+++  +  E
Sbjct:    2 SASRPVVTFVTGNAKKLEEVRAIL--GGDALPVRIVSQKLDLPELQGEPEEISSEKCRLAAEQVGGPVFVEDTSLCFNALGGLPGPYIKWFLEKTGHEGLNNLLAAYPDKSAYAQCIFGFSAGPGQTPITFDGRTPGQIV-PARGPTDFGWDPVFQPEGYSETYAEMDKAEKNKISHRYRALVKLQEHLVAHGAE 193
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: PRP84574.1 (hypothetical protein PROFUN_09247 [Planoprotostelium fungivorum])

HSP 1 Score: 177.2 bits (448), Expect = 7.100e-41
Identity = 89/183 (48.63%), Postives = 113/183 (61.75%), Query Frame = 0 
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYI 259
            + F+T N  K  EV A+L  GG    F +    I LPELQ     I++EK R+A+ ++  P +VEDT LC NAL GLPGPYIK FLD LG  GL K++  YED+SA A+C   +S GP   P+ F G T G+IV P    N FGWD  F P GF  TF++M    KNAISHRS AL + ++Y+
Sbjct:    6 VTFVTGNAKKLEEVNAILGAGG---QFKVIGKSIDLPELQGETADISVEKCRIAARQINGPVIVEDTCLCYNALKGLPGPYIKWFLDRLGHEGLNKLLAGYEDKSAYALCTFSYSAGPDANPITFEGRTEGKIV-PARGPNNFGWDPIFLPDGFNETFAEMNKETKNAISHRSRALAKLREYL 184
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: PAA85350.1 (hypothetical protein BOX15_Mlig029812g1 [Macrostomum lignano] >PAA86933.1 hypothetical protein BOX15_Mlig015606g2 [Macrostomum lignano])

HSP 1 Score: 175.3 bits (443), Expect = 2.700e-40
Identity = 92/189 (48.68%), Postives = 117/189 (61.90%), Query Frame = 0 
Query:   70 SQKRAVIKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYI 259
            S K  ++ F+T NP K RE+ ++L   GL     +   DI LPELQ  P ++A EK RLA+ RV  P LVEDTSLC NALGGLPG YIK FLD LG  GL K++ A+ D+SA A C   +S GPGQ+  +F G+  G I      DN FGWD  F+P GF  TF++M    KN ISHR+ AL   + ++
Sbjct:    4 SGKIKLVTFVTGNPNKLRELNSILLTAGL--SDRVVNKDIDLPELQGLPEMVAREKCRLAAERVGGPVLVEDTSLCFNALGGLPGVYIKWFLDALGPDGLPKLLAAFPDKSAEARCVFAYSRGPGQEVKVFAGVCPGSIADKPAGDNRFGWDPIFKPDGFHETFAQMVPEVKNTISHRAKALSLVRDFL 190
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_021981713.1 (inosine triphosphate pyrophosphatase [Helianthus annuus] >OTG37789.1 putative inosine triphosphate pyrophosphatase [Helianthus annuus])

HSP 1 Score: 174.5 bits (441), Expect = 4.600e-40
Identity = 97/202 (48.02%), Postives = 124/202 (61.39%), Query Frame = 0 
Query:   59 LACSTPTAASYSQKRAVIKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            +A +   A S   K   + F+T N  K  EV+ +L   G  +PF  Q+L + LPELQ  P  IA EK RLA+N+VK P LVEDT LC NAL GLPGPYIK FL +LG  GL  M+ AYED+SA A+C    + GP  +P+ F G T G+IV P    N FGWD  F+P G+  T+++M   EKN ISHRS AL   + + A+
Sbjct:    1 MAAARVVAGSGLVKLPPVTFVTGNAKKLEEVKVIL---GQSIPF--QSLKLDLPELQGDPEDIAKEKARLAANQVKGPVLVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNMLMAYEDKSAYALCIFSLAIGPDSEPLTFVGKTPGKIV-PARGPNDFGWDPVFQPDGYEQTYAEMPKEEKNKISHRSRALALVKSHFAE 196
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: OLY77688.1 (Inosine triphosphate pyrophosphatase [Smittium mucronatum] >OLY80886.1 Inosine triphosphate pyrophosphatase [Smittium mucronatum])

HSP 1 Score: 174.1 bits (440), Expect = 6.000e-40
Identity = 87/183 (47.54%), Postives = 115/183 (62.84%), Query Frame = 0 
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYI 259
            I F+T N  K +EV  +L      V   +++ DI LPE+Q S   I+  K + A+  VK P ++EDTSLC NA  GLPGPY+K FL E+G AGL KM++ +ED+S  A+C   +SPGPG +PV F GIT G IV P      FGWD  F+P GF  T+++MT   KN+ISHR  AL   Q+Y+
Sbjct:    3 ITFVTGNKNKLKEVAKILGSNSSIV---LKSRDIDLPEIQGSSEEISKHKCKQAAEMVKGPVIIEDTSLCYNAFNGLPGPYVKWFLKEMGPAGLAKMLDGFEDKSGYAMCTFSYSPGPGNEPVQFNGITNGSIVAP-RGPTTFGWDPIFKPDGFDETYAEMTAETKNSISHRYRALVLLQEYL 181
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_018840252.1 (PREDICTED: inosine triphosphate pyrophosphatase isoform X2 [Juglans regia])

HSP 1 Score: 173.7 bits (439), Expect = 7.800e-40
Identity = 93/185 (50.27%), Postives = 117/185 (63.24%), Query Frame = 0 
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK RLAS  V  P LVEDT LC NAL GLPGPY+K FL +LG  GL  M+ AYED+SA A+C   F+ GP  +P+ F G T G+IV P    N FGWD  F+P G+  T+++M   EKN ISHRS AL   + + AD
Sbjct:   15 VTFVTGNAKKLEEVRAIL---GNSIPF--QSLKLDLPELQGEPEDISKEKARLASVEVNGPVLVEDTCLCFNALKGLPGPYVKWFLQKLGHEGLNNMLMAYEDKSAYALCAFSFALGPNAEPITFLGRTPGKIV-PPRGPNDFGWDPIFQPDGYEQTYAEMPKEEKNKISHRSKALDLVKSHFAD 193
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_007223456.1 (inosine triphosphate pyrophosphatase [Prunus persica] >ONI26985.1 hypothetical protein PRUPE_1G060800 [Prunus persica])

HSP 1 Score: 173.3 bits (438), Expect = 1.000e-39
Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 0 
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIAD 261
            + F+T N  K  EV+A+L   G  +PF  Q+L + LPELQ  P  I+ EK +LA+ +V  P LVEDT LC NAL GLPGPYIK FL +LG  GL+ ++ AYED+SA A+C+  FS GP  +P+ F G T G+IV P      FGWD  F+P G+  T+++M   EKN ISHRS AL   + + A+
Sbjct:   17 VTFVTGNAKKLEEVRAIL---GSSIPF--QSLRLDLPELQGEPEEISKEKAKLAALQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLYNLLMAYEDKSAYALCSFSFSTGPSVEPITFLGKTPGKIV-PARGPTDFGWDAMFQPDGYDQTYAEMPKEEKNKISHRSRALALVKSHFAE 195
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: XP_004982962.1 (inosine triphosphate pyrophosphatase [Setaria italica] >KQK88849.1 hypothetical protein SETIT_037577mg [Setaria italica])

HSP 1 Score: 172.9 bits (437), Expect = 1.300e-39
Identity = 89/184 (48.37%), Postives = 121/184 (65.76%), Query Frame = 0 
Query:   76 IKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIA 260
            + F+T N  K  EV+A+L   G  VPF  Q+L + LPELQ  P  I+ EK R+A+++V  P LVEDT LC NAL GLPGPYIK FL+++G  GL  +++AYED+SA A+C    + GPG++P+ F G T G+IV P    N FGWD  F+P GF  T+++M  + KN ISHR  AL   +++ A
Sbjct:   12 VTFVTGNAKKLEEVRAIL---GSSVPF--QSLKLDLPELQGEPEDISKEKARMAASKVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLIKAYEDKSAFAMCIFSLALGPGEEPITFVGRTAGKIV-PARGPNDFGWDPVFQPDGFEQTYAEMPKSVKNEISHRGKALALVKEHFA 189
[Close]
BLAST of NO02G03330 vs. NCBI_GenBank
Match: CEO95208.1 (hypothetical protein PBRA_003974 [Plasmodiophora brassicae])

HSP 1 Score: 172.9 bits (437), Expect = 1.300e-39
Identity = 89/190 (46.84%), Postives = 124/190 (65.26%), Query Frame = 0 
Query:   70 SQKRAVIKFITSNPLKTREVQALLAEGGLRVPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALGGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIFTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLALRQFQQYIA 260
            +QKR +  F+T N  K RE + +L   G  VP+ +++  + LPELQ  P+ IA++K R+A+  V    LVEDT LC NAL GLPGPY+K FL + G AGL  ++ AY+D++A A+C   FS GPG  P++F G   G IV      + FGWD  F+P G+TTTF++M+ +EKNAISHR  AL + + Y+A
Sbjct:    2 AQKRLI--FVTGNQNKLREAKEIL---GAAVPW-LESRSMDLPELQGEPVDIAMQKCRIAAETVNGAVLVEDTCLCFNALHGLPGPYVKWFLKKTGHAGLNNLLHAYDDKTAYALCTFAFSEGPGSTPIVFQGTCEGSIVQARGPPD-FGWDPIFQPQGYTTTFAEMSKDEKNAISHRFRALEKLRDYLA 184
The following BLAST results are available for this feature:
BLAST of NO02G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30212.11.200e-7578.86inosine triphosphate pyrophosphatase [Nannochlorop... [more]
XP_005789505.11.400e-4148.72hypothetical protein EMIHUDRAFT_447001 [Emiliania ... [more]
PRP84574.17.100e-4148.63hypothetical protein PROFUN_09247 [Planoprotosteli... [more]
PAA85350.12.700e-4048.68hypothetical protein BOX15_Mlig029812g1 [Macrostom... [more]
XP_021981713.14.600e-4048.02inosine triphosphate pyrophosphatase [Helianthus a... [more]
OLY77688.16.000e-4047.54Inosine triphosphate pyrophosphatase [Smittium muc... [more]
XP_018840252.17.800e-4050.27PREDICTED: inosine triphosphate pyrophosphatase is... [more]
XP_007223456.11.000e-3948.65inosine triphosphate pyrophosphatase [Prunus persi... [more]
XP_004982962.11.300e-3948.37inosine triphosphate pyrophosphatase [Setaria ital... [more]
CEO95208.11.300e-3946.84hypothetical protein PBRA_003974 [Plasmodiophora b... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006984NSK006984Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03330.1NO02G03330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574653gene_921Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g149gene334Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03330.1NO02G03330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03330 ID=NO02G03330|Name=NO02G03330|organism=Nannochloropsis oceanica|type=gene|length=993bp
ATGGGGGGGGCGCAAGGCATCCCACGGGCGTTGGCACCAGTGGTGCTGCT
TTCATTCTGCGTAATTGCACCTTCTTGGGCATTTGTTCGACCCGTTCCCG
CCAGATGCACACTTTCTTCCTCTCTTTCCGGCCACACCATAATCGCAAGT
GCCACCCACGTTCCTGGAAGCACACTGGCATGCTCAACGCCTACGGCAGC
CAGCTACAGTCAAAAAAGGGCAGTTATAAAATTCATTACGAGCAATCCTC
TTAAAACGCGTGAAGTGCAAGCCCTATTGGCGGAAGGAGGTCTTCGAGTG
CCCTTCGACATTCAGACTCTTGATATACAGCTGCCTGAGCTGCAAGAGTC
TCCGCTGGTGATTGCAATTGAAAAGACTCGGCTAGCCTCAAACAGAGTAA
AGgtaagctttttcatttcctcgccaccaactcacttctgcttccttcca
gtaagtcacttcttacctgtcccttccctttgacacgtacagGCGCCATG
CCTTGTAGAGGACACCTCGTTGTGCCTCAACGCACTCGGCGGGTTACCAG
GACCATACATCAAGCACTTCTTGGATGAGTTGGGAAGCGCGGGATTGTTT
AAGgtatgcttttcaacatgtattcgtggaggagaggttgacccacatca
tctaccttccctcctcctgtacctcccccagATGGTGGAAGCTTACGAAG
ACCGCTCCGCCAGGGCCATCTGCAACGTCGGGTTTTCTCCCGGTCCAGGG
CAGCAGCCCGTAATTTTTACTGGTATCACATACGGCGAAATTGTTCTCCC
GGAAGAGGACGACAACGGGTTTGGATGGGATACTTGCTTTCGTCCTTCTG
GGTTCACCACCACTTTCTCGAAGATGACGGTCAATGAGAAGAATGCCATT
TCTCACCGCAGTTTGGCGTTGCGCCAATTCCAACAATACATAGCAGATAA
TTGGGGCGAGGGAGGATTTGATGAAAGGGGTGTATTCAAGTAG
back to top

protein sequence of NO02G03330.1

>NO02G03330.1-protein ID=NO02G03330.1-protein|Name=NO02G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MGGAQGIPRALAPVVLLSFCVIAPSWAFVRPVPARCTLSSSLSGHTIIAS
ATHVPGSTLACSTPTAASYSQKRAVIKFITSNPLKTREVQALLAEGGLRV
PFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNALG
GLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVIF
TGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSLA
LRQFQQYIADNWGEGGFDERGVFK*
back to top
Synonyms
Publications