NO02G03170, NO02G03170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03170 vs. NCBI_GenBank
Match: EWM30268.1 (udp-sugar transporter ust74c [Nannochloropsis gaditana]) HSP 1 Score: 302.8 bits (774), Expect = 1.100e-78 Identity = 163/198 (82.32%), Postives = 182/198 (91.92%), Query Frame = 0 Query: 67 MAP-VGATAWQKGGSALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLFG 264 MAP VGA+ WQKGGSAL+YG ASLSIMV+NK+VLT Y FPSFAFLAA QFLFTT++IF L VGR+QVTAMSWEV+RVMAPLV+ISLVNVL+GLGGTQK+SLPMFTALRRFSILMTMLLEAYVFGT PS AVK+SVF+MI GALVAA+SDL+FDTVGY MI LSDLFTALNGVVMK+TL++ +VNKMAVLYYNSLFG Sbjct: 1 MAPNVGASPWQKGGSALMYGMASLSIMVVNKIVLTSYQFPSFAFLAASQFLFTTMIIFILDRVGRLQVTAMSWEVVRVMAPLVVISLVNVLAGLGGTQKVSLPMFTALRRFSILMTMLLEAYVFGTSPSTAVKMSVFMMIIGALVAAMSDLSFDTVGYAMILLSDLFTALNGVVMKKTLSSSSTVNKMAVLYYNSLFG 198
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_014773399.1 (PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Octopus bimaculoides] >KOF87176.1 hypothetical protein OCBIM_22017346mg [Octopus bimaculoides]) HSP 1 Score: 168.7 bits (426), Expect = 2.400e-38 Identity = 96/183 (52.46%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 80 SALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 SAL YG S I+V+NK++LT ++FPSF FLA Q + LV+F K + V+ + ++ R + PL I+ +VN+L GLGGT+K++LPMFT LRRFSIL TM+LE ++ TR V+ +VFLMIFGAL+AA SDLTFD +GY I L+D FTALNGV K+ L A + K +L+YNSLF Sbjct: 17 SALFYGCCSFLIIVVNKIILTNFNFPSFQFLAIGQMVACLLVLFIGKELNIVKFPEFTSDIFRKVCPLPIVYVVNLLFGLGGTKKLNLPMFTVLRRFSILFTMILEYFILKTRAQTYVQFTVFLMIFGALIAASSDLTFDLIGYIFILLNDFFTALNGVYTKKKLDA-KELGKHGLLFYNSLF 198
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_009062674.1 (hypothetical protein LOTGIDRAFT_194867 [Lottia gigantea] >ESO86696.1 hypothetical protein LOTGIDRAFT_194867 [Lottia gigantea]) HSP 1 Score: 166.4 bits (420), Expect = 1.200e-37 Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 80 SALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 SAL YG AS I VINKVVLT Y FPSF FL Q L +V+F +K +G +Q ++ + ++ + PL ++ N+++GLGGT+K++LPMFT LRRFSIL TM+ E ++ G R V++SVFLMIFGALVA DLTFD VGY +I L+DL TA NGV K+ L A + K +LYYNSLF Sbjct: 15 SALFYGVASFLITVINKVVLTTYKFPSFQFLGFGQMLSGVVVLFIVKNMGIIQFPDLNKDTIKKVWPLPLMYFTNLVTGLGGTKKLNLPMFTILRRFSILFTMIAEFFILGVRARGVVQISVFLMIFGALVAVAGDLTFDLVGYILILLNDLATAANGVFTKKKLDA-KDLGKYGLLYYNSLF 196
BLAST of NO02G03170 vs. NCBI_GenBank
Match: EWM28748.1 (udp-sugar transporter ust74c [Nannochloropsis gaditana]) HSP 1 Score: 164.1 bits (414), Expect = 6.000e-37 Identity = 101/197 (51.27%), Postives = 131/197 (66.50%), Query Frame = 0 Query: 72 ATAWQKGGSALLYGSASLSIMVINKVVLT-----IYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLFG 264 +T+ QK GSAL + S SI+ +NK +L FPS LK+ GRV + +S VLR + PL ++ +NVL GLGGTQKISLPMFT LRRFSI MTM LE + G S +V+ SVFLM+FGA++A L+D++FD VGY IF +++FTALNGV+MKRTLT+ +++KMAVLYYNSLFG Sbjct: 47 STSAQKLGSALFFALTSFSIIFVNKALLASPAHGFLGFPSXXXXXXXXXXXXXXXXXXLKLRGRVDIPELSSNVLRCLWPLALVGSLNVLCGLGGTQKISLPMFTVLRRFSIPMTMGLEWLLLGVAASRSVQFSVFLMVFGAVLAGLADMSFDPVGYLFIFGNNIFTALNGVIMKRTLTS-SNISKMAVLYYNSLFG 242
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_014157607.1 (hypothetical protein SARC_04064 [Sphaeroforma arctica JP610] >KNC83705.1 hypothetical protein SARC_04064 [Sphaeroforma arctica JP610]) HSP 1 Score: 162.5 bits (410), Expect = 1.700e-36 Identity = 97/196 (49.49%), Postives = 128/196 (65.31%), Query Frame = 0 Query: 70 VGATAWQKGGSALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCL---KVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 VG T Q+G + + Y + S SIM +NK+VLT YHFPSF FLA CQF+ T IFCL K + + + PL I ++N L+GLGGTQKIS+PMFT LRRFSI+ TM+LE ++ G S VK VFLM+FGALVAA+ DL+FD GY I +++L TA NGVV+K+ L + + ++YYN+LF Sbjct: 17 VGPTMRQQGLAGMFYATTSFSIMFMNKIVLTSYHFPSFLFLALCQFVAT---IFCLEAGKTTNLITYPDFDMKHFWKVFPLPFIFMLNTLTGLGGTQKISIPMFTVLRRFSIVFTMILEGWLLGNVSSRNVKFCVFLMVFGALVAAVDDLSFDMAGYTFIMINNLATAANGVVIKKKLES-KELGTFGLMYYNTLF 208
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_022313739.1 (UDP-sugar transporter UST74c-like [Crassostrea virginica]) HSP 1 Score: 160.2 bits (404), Expect = 8.600e-36 Identity = 94/183 (51.37%), Postives = 122/183 (66.67%), Query Frame = 0 Query: 80 SALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 SAL YG +S I+V NK+ LT Y FPSF FLA Q +V+F K +G V S+ + + PL +I + N++ GLGGTQ+++LPMFT LRRF+IL TM+ E YV + S V+ +VFLMIFGALVAA DL+FD +GY MI L+D+FTA NGV K+ L A + K +LYYNSLF Sbjct: 14 SALFYGVSSFMIIVANKLTLTSYGFPSFQFLALGQMTTGLVVLFLAKQIGLVDFPGFSFSIFWKIWPLPLIYIGNLIFGLGGTQRLNLPMFTILRRFTILFTMIAEYYVLNIKASRTVQFTVFLMIFGALVAASGDLSFDLIGYIMILLNDVFTAANGVYFKKKLDA-KDLGKYGLLYYNSLF 195
BLAST of NO02G03170 vs. NCBI_GenBank
Match: KFB50841.1 (AGAP005200-PA-like protein [Anopheles sinensis]) HSP 1 Score: 159.8 bits (403), Expect = 1.100e-35 Identity = 97/201 (48.26%), Postives = 132/201 (65.67%), Query Frame = 0 Query: 62 NSTSIMAPVGATAWQKGGSALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 ++ S MA T + K SA+ YG +S I V+NK VLT Y FPSF L+ Q + +V+F K +G V+ S ++ R + PL +I L N++ GLGGTQ +SLPMF ALRRFSIL+TMLLE V G RP++AVK+SVF M+ GAL+AAL DL+F+ GY + +++ TA NGV MK+ L + K ++YYNSLF Sbjct: 10 SAASEMAGSDTTQFLKLSSAVFYGLSSFLITVVNKTVLTSYRFPSFLVLSLGQLTASIVVLFVAKRLGLVKFPDFSRDIARRIFPLPLIYLGNMMFGLGGTQALSLPMFAALRRFSILLTMLLELLVLGIRPTLAVKVSVFAMVGGALMAALDDLSFNLQGYMYVMITNTLTAANGVYMKKKLDTA-DMGKYGLMYYNSLF 209
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_021937245.1 (UDP-sugar transporter UST74c isoform X1 [Zootermopsis nevadensis] >XP_021937246.1 UDP-sugar transporter UST74c isoform X1 [Zootermopsis nevadensis] >KDR09907.1 UDP-sugar transporter UST74c [Zootermopsis nevadensis]) HSP 1 Score: 159.5 bits (402), Expect = 1.500e-35 Identity = 88/192 (45.83%), Postives = 128/192 (66.67%), Query Frame = 0 Query: 71 GATAWQKGGSALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 G++ +Q+ GSA LYG+AS I V+NK VLT YHFPS+ L Q T ++++ K +G + + V R + PL I + N++ GLGGT+++SLPM T LRRFSILMTM+ E Y G RP++AV+ SV+ MI GA++AA +DL F +GY ++ ++D FTA NGV MK L + + K +++YN+LF Sbjct: 27 GSSMFQRVGSAALYGAASFLITVVNKTVLTTYHFPSYQVLGIGQMAATVMILYVCKRLGLLSFPHLDSSVFRKIWPLPFIYMGNLVFGLGGTKELSLPMLTVLRRFSILMTMIGELYFLGIRPTIAVQFSVYTMIAGAMIAASNDLAFSPLGYMLVLMNDAFTAANGVCMKSKLDSA-ELGKHGIMFYNALF 217
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_021377014.1 (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Mizuhopecten yessoensis] >OWF39097.1 UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Mizuhopecten yessoensis]) HSP 1 Score: 159.5 bits (402), Expect = 1.500e-35 Identity = 95/183 (51.91%), Postives = 124/183 (67.76%), Query Frame = 0 Query: 80 SALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 +AL YG+AS I+V NKVVLT Y FPSF FLA Q + +V+ +K G VQ S +VL+ + PL +I + N++ GLGGT+K++LPMFT LRRFSIL+TM+ E +V G + V+ +VFLMIFGALVAA DL FD GY I L+D FTA NGV K+ L A + K +L+YN+LF Sbjct: 16 AALFYGTASFLIIVCNKVVLTTYKFPSFQFLAFGQMITGIVVLLVVKQAGLVQFPGPSIDVLKKIWPLPLIYMGNLVFGLGGTKKLNLPMFTILRRFSILLTMIAEYFVLGVKAPKVVQFTVFLMIFGALVAASDDLAFDLWGYIFILLNDFFTAANGVYTKKKLEA-KELGKYGLLFYNALF 197
BLAST of NO02G03170 vs. NCBI_GenBank
Match: XP_021937247.1 (UDP-sugar transporter UST74c isoform X2 [Zootermopsis nevadensis] >XP_021937248.1 UDP-sugar transporter UST74c isoform X2 [Zootermopsis nevadensis] >XP_021937249.1 UDP-sugar transporter UST74c isoform X2 [Zootermopsis nevadensis] >XP_021937250.1 UDP-sugar transporter UST74c isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 159.5 bits (402), Expect = 1.500e-35 Identity = 88/192 (45.83%), Postives = 128/192 (66.67%), Query Frame = 0 Query: 71 GATAWQKGGSALLYGSASLSIMVINKVVLTIYHFPSFAFLAACQFLFTTLVIFCLKVVGRVQVTAMSWEVLRVMAPLVIISLVNVLSGLGGTQKISLPMFTALRRFSILMTMLLEAYVFGTRPSVAVKLSVFLMIFGALVAALSDLTFDTVGYFMIFLSDLFTALNGVVMKRTLTACPSVNKMAVLYYNSLF 263 G++ +Q+ GSA LYG+AS I V+NK VLT YHFPS+ L Q T ++++ K +G + + V R + PL I + N++ GLGGT+++SLPM T LRRFSILMTM+ E Y G RP++AV+ SV+ MI GA++AA +DL F +GY ++ ++D FTA NGV MK L + + K +++YN+LF Sbjct: 9 GSSMFQRVGSAALYGAASFLITVVNKTVLTTYHFPSYQVLGIGQMAATVMILYVCKRLGLLSFPHLDSSVFRKIWPLPFIYMGNLVFGLGGTKELSLPMLTVLRRFSILMTMIGELYFLGIRPTIAVQFSVYTMIAGAMIAASNDLAFSPLGYMLVLMNDAFTAANGVCMKSKLDSA-ELGKHGIMFYNALF 199 The following BLAST results are available for this feature:
BLAST of NO02G03170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03170 ID=NO02G03170|Name=NO02G03170|organism=Nannochloropsis oceanica|type=gene|length=2899bpback to top protein sequence of NO02G03170.1 >NO02G03170.1-protein ID=NO02G03170.1-protein|Name=NO02G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bpback to top protein sequence of NO02G03170.2 >NO02G03170.2-protein ID=NO02G03170.2-protein|Name=NO02G03170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=379bpback to top protein sequence of NO02G03170.3 >NO02G03170.3-protein ID=NO02G03170.3-protein|Name=NO02G03170.3|organism=Nannochloropsis oceanica|type=polypeptide|length=264bpback to top protein sequence of NO02G03170.4 >NO02G03170.4-protein ID=NO02G03170.4-protein|Name=NO02G03170.4|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
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