NO02G03030, NO02G03030 (gene) Nannochloropsis oceanica

Overview
NameNO02G03030
Unique NameNO02G03030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1741
Alignment locationchr2:812622..814362 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:812622..814362 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006951NSK006951Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03030.1NO02G03030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|145441gene_892Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03030.1NO02G03030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03030 ID=NO02G03030|Name=NO02G03030|organism=Nannochloropsis oceanica|type=gene|length=1741bp
CCCCCCCCTTGAATAGTCTAAATGACCACGACAAGACGGCAACAAGGCGG
CCACGACGCCAGCTTTTCCTCCTCATTTTTCTCCCTCAGACACAAAGACG
TCACTCGTGCATACGCTCCTGCCTCTTATAGCCCCACCCAAATTGTTGAG
GAGTGGAAACATATATTTGGTCCGGGCAGCGACCTCTTTGAGCCCGGGGA
CCCCCGCGGCATTCTTGGCGGTATCACCCCGCTAGAAGTCCGAAAGCAGC
TAGATTTCCAGACCGCAGAAATCGAAAAGCTACGGGCGGAGGTGGTCGAG
ATGAGGAGATGTGTACACAAGGAGCAACAAGAGCTTAAGTCACAAGTCAT
TTTTTTTGCCGCAAAGGCACGCGCGGCGGCCCGTCAGGCCAAGTCGGAAG
GCACCGATTCCTTGACGTTGCAAAAGAAGGCACATGAACGAGAATTGGCA
CGTTTGCGCGAAGCCCACGAATACGAAATTACAGCTTGGAGGGATAGGGT
AGAAGCGCTTGAGCGAGAGCAGCAGCAACAGCAACCCTCATTCCCGATTC
CACCCCCGTCCTCTTCTGGTCGACCGCAGTCCTCTTCGGCGCGACTCCAA
TCAACCTCCTCCTCCTCGCCCTCGAGACGTCCCTTTGGTTCCACCCAAAT
TCCGGCTACATCCATCTGCGAAAAAGAAGGGCAACAGACATGTAGGAGTG
CCTATAAAGCTGTGGGCCGGCGGGAGGACAAGGAGGAAGAGGAGGAAGCC
CCGCGTGCCCTCCCTCTCCCGATTCGATTCCCTAATTTTCCCGTGCAGTC
TACAGAGGAGCAAGCTTTGCTGGAAAAGAGACTGGCGGACTTCGAGGAGC
TATATGAAGTCACGCGCCTGGCCATGCAGGCAACTGCAATGACCACTTCA
GCAGCAGCAGCAGCAGCAGCAGCAGCATTACCACCACCACCACCAGCAGC
AGTAGCAGCGGCAGCGGTAAGCGTCGGAGGGAGGAAGGGGAGAGAAGGGA
AAGAGGGATCAGCGGAGAGCCAAAATAAAATAGACTTTACGTTAGGGAGC
GTGGACGTATATCCTGGTCAGACGGCTCCGAGGACGGATGGCATAGGAGA
GGGGAAGGTGGGAGGAGGAAGTGGAGGTGGAGGAAGAGGCAGAGGCAGAA
TTCCGCCTATTCTGCCGCGGGCGACGACCCACCAAAGGAAAAAAAAAACG
ATGACGGCTCAACAAGGGAGGAGGAGCGCGACGTCGACCACCAAAAGCAA
CACCTTCGGTGATCGAGCTTTTACGCGCTTAGATCCTACGCAGTACCCCA
CGTCCGGGGTAAGCAATCCGCCTATGCTTCCTCCTACACGAGAACCCAAT
GATGGTGCTGGTGTGCAGGAGCCGCGGGACATTCGGGGCATATTTAAACC
GTTGATGACAGCAGAGCAGAAGGAGAGAGATAAGAGAGAGGAGGAGGAAG
AGGAGGAGGATGAGAGCGAGGAGGAAGAGGTGGGGGATGTGGAAGGGGAG
GAAAGTGTCAACGAAGAGAAAGGGAGCCTAGAAGAGATGGAAAGCAGCGA
AGGAGAGGAAGAAGAAAGTGGCGACTCCGAGCGTGGGGATTATGACTGTG
ATCATGATGATGATGAGGAGGAGGAGGAGTATGAGAGTGAGAATGAGACC
GAGAGCGAGGAGGAAGATTGGCTGGAGAACGAGTAAGAAGAGTCTTCTTA
ATAGAGAAGGCATGTTCAAGAAGAAAAAACCCAAATGTACG
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protein sequence of NO02G03030.1

>NO02G03030.1-protein ID=NO02G03030.1-protein|Name=NO02G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MTTTRRQQGGHDASFSSSFFSLRHKDVTRAYAPASYSPTQIVEEWKHIFG
PGSDLFEPGDPRGILGGITPLEVRKQLDFQTAEIEKLRAEVVEMRRCVHK
EQQELKSQVIFFAAKARAAARQAKSEGTDSLTLQKKAHERELARLREAHE
YEITAWRDRVEALEREQQQQQPSFPIPPPSSSGRPQSSSARLQSTSSSSP
SRRPFGSTQIPATSICEKEGQQTCRSAYKAVGRREDKEEEEEAPRALPLP
IRFPNFPVQSTEEQALLEKRLADFEELYEVTRLAMQATAMTTSAAAAAAA
AALPPPPPAAVAAAAVSVGGRKGREGKEGSAESQNKIDFTLGSVDVYPGQ
TAPRTDGIGEGKVGGGSGGGGRGRGRIPPILPRATTHQRKKKTMTAQQGR
RSATSTTKSNTFGDRAFTRLDPTQYPTSGVSNPPMLPPTREPNDGAGVQE
PRDIRGIFKPLMTAEQKERDKREEEEEEEDESEEEEVGDVEGEESVNEEK
GSLEEMESSEGEEEESGDSERGDYDCDHDDDEEEEEYESENETESEEEDW
LENE*
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Synonyms
Publications