NO02G03030.1, NO02G03030.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G03030.1
Unique NameNO02G03030.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1741
Alignment locationchr2:812622..814362 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:812622..814362 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G03030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03030NO02G03030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G03030.1NO02G03030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G03030.1.cds1NO02G03030.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G03030.1 ID=NO02G03030.1|Name=NO02G03030.1|organism=Nannochloropsis oceanica|type=mRNA|length=1741bp
CCCCCCCCTTGAATAGTCTAAATGACCACGACAAGACGGCAACAAGGCGG
CCACGACGCCAGCTTTTCCTCCTCATTTTTCTCCCTCAGACACAAAGACG
TCACTCGTGCATACGCTCCTGCCTCTTATAGCCCCACCCAAATTGTTGAG
GAGTGGAAACATATATTTGGTCCGGGCAGCGACCTCTTTGAGCCCGGGGA
CCCCCGCGGCATTCTTGGCGGTATCACCCCGCTAGAAGTCCGAAAGCAGC
TAGATTTCCAGACCGCAGAAATCGAAAAGCTACGGGCGGAGGTGGTCGAG
ATGAGGAGATGTGTACACAAGGAGCAACAAGAGCTTAAGTCACAAGTCAT
TTTTTTTGCCGCAAAGGCACGCGCGGCGGCCCGTCAGGCCAAGTCGGAAG
GCACCGATTCCTTGACGTTGCAAAAGAAGGCACATGAACGAGAATTGGCA
CGTTTGCGCGAAGCCCACGAATACGAAATTACAGCTTGGAGGGATAGGGT
AGAAGCGCTTGAGCGAGAGCAGCAGCAACAGCAACCCTCATTCCCGATTC
CACCCCCGTCCTCTTCTGGTCGACCGCAGTCCTCTTCGGCGCGACTCCAA
TCAACCTCCTCCTCCTCGCCCTCGAGACGTCCCTTTGGTTCCACCCAAAT
TCCGGCTACATCCATCTGCGAAAAAGAAGGGCAACAGACATGTAGGAGTG
CCTATAAAGCTGTGGGCCGGCGGGAGGACAAGGAGGAAGAGGAGGAAGCC
CCGCGTGCCCTCCCTCTCCCGATTCGATTCCCTAATTTTCCCGTGCAGTC
TACAGAGGAGCAAGCTTTGCTGGAAAAGAGACTGGCGGACTTCGAGGAGC
TATATGAAGTCACGCGCCTGGCCATGCAGGCAACTGCAATGACCACTTCA
GCAGCAGCAGCAGCAGCAGCAGCAGCATTACCACCACCACCACCAGCAGC
AGTAGCAGCGGCAGCGGTAAGCGTCGGAGGGAGGAAGGGGAGAGAAGGGA
AAGAGGGATCAGCGGAGAGCCAAAATAAAATAGACTTTACGTTAGGGAGC
GTGGACGTATATCCTGGTCAGACGGCTCCGAGGACGGATGGCATAGGAGA
GGGGAAGGTGGGAGGAGGAAGTGGAGGTGGAGGAAGAGGCAGAGGCAGAA
TTCCGCCTATTCTGCCGCGGGCGACGACCCACCAAAGGAAAAAAAAAACG
ATGACGGCTCAACAAGGGAGGAGGAGCGCGACGTCGACCACCAAAAGCAA
CACCTTCGGTGATCGAGCTTTTACGCGCTTAGATCCTACGCAGTACCCCA
CGTCCGGGGTAAGCAATCCGCCTATGCTTCCTCCTACACGAGAACCCAAT
GATGGTGCTGGTGTGCAGGAGCCGCGGGACATTCGGGGCATATTTAAACC
GTTGATGACAGCAGAGCAGAAGGAGAGAGATAAGAGAGAGGAGGAGGAAG
AGGAGGAGGATGAGAGCGAGGAGGAAGAGGTGGGGGATGTGGAAGGGGAG
GAAAGTGTCAACGAAGAGAAAGGGAGCCTAGAAGAGATGGAAAGCAGCGA
AGGAGAGGAAGAAGAAAGTGGCGACTCCGAGCGTGGGGATTATGACTGTG
ATCATGATGATGATGAGGAGGAGGAGGAGTATGAGAGTGAGAATGAGACC
GAGAGCGAGGAGGAAGATTGGCTGGAGAACGAGTAAGAAGAGTCTTCTTA
ATAGAGAAGGCATGTTCAAGAAGAAAAAACCCAAATGTACG
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protein sequence of NO02G03030.1

>NO02G03030.1-protein ID=NO02G03030.1-protein|Name=NO02G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MTTTRRQQGGHDASFSSSFFSLRHKDVTRAYAPASYSPTQIVEEWKHIFG
PGSDLFEPGDPRGILGGITPLEVRKQLDFQTAEIEKLRAEVVEMRRCVHK
EQQELKSQVIFFAAKARAAARQAKSEGTDSLTLQKKAHERELARLREAHE
YEITAWRDRVEALEREQQQQQPSFPIPPPSSSGRPQSSSARLQSTSSSSP
SRRPFGSTQIPATSICEKEGQQTCRSAYKAVGRREDKEEEEEAPRALPLP
IRFPNFPVQSTEEQALLEKRLADFEELYEVTRLAMQATAMTTSAAAAAAA
AALPPPPPAAVAAAAVSVGGRKGREGKEGSAESQNKIDFTLGSVDVYPGQ
TAPRTDGIGEGKVGGGSGGGGRGRGRIPPILPRATTHQRKKKTMTAQQGR
RSATSTTKSNTFGDRAFTRLDPTQYPTSGVSNPPMLPPTREPNDGAGVQE
PRDIRGIFKPLMTAEQKERDKREEEEEEEDESEEEEVGDVEGEESVNEEK
GSLEEMESSEGEEEESGDSERGDYDCDHDDDEEEEEYESENETESEEEDW
LENE*
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mRNA from alignment at chr2:812622..814362+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G03030.1 ID=NO02G03030.1|Name=NO02G03030.1|organism=Nannochloropsis oceanica|type=mRNA|length=1741bp|location=Sequence derived from alignment at chr2:812622..814362+ (Nannochloropsis oceanica)
CCCCCCCCTTGAATAGTCTAAATGACCACGACAAGACGGCAACAAGGCGG
CCACGACGCCAGCTTTTCCTCCTCATTTTTCTCCCTCAGACACAAAGACG
TCACTCGTGCATACGCTCCTGCCTCTTATAGCCCCACCCAAATTGTTGAG
GAGTGGAAACATATATTTGGTCCGGGCAGCGACCTCTTTGAGCCCGGGGA
CCCCCGCGGCATTCTTGGCGGTATCACCCCGCTAGAAGTCCGAAAGCAGC
TAGATTTCCAGACCGCAGAAATCGAAAAGCTACGGGCGGAGGTGGTCGAG
ATGAGGAGATGTGTACACAAGGAGCAACAAGAGCTTAAGTCACAAGTCAT
TTTTTTTGCCGCAAAGGCACGCGCGGCGGCCCGTCAGGCCAAGTCGGAAG
GCACCGATTCCTTGACGTTGCAAAAGAAGGCACATGAACGAGAATTGGCA
CGTTTGCGCGAAGCCCACGAATACGAAATTACAGCTTGGAGGGATAGGGT
AGAAGCGCTTGAGCGAGAGCAGCAGCAACAGCAACCCTCATTCCCGATTC
CACCCCCGTCCTCTTCTGGTCGACCGCAGTCCTCTTCGGCGCGACTCCAA
TCAACCTCCTCCTCCTCGCCCTCGAGACGTCCCTTTGGTTCCACCCAAAT
TCCGGCTACATCCATCTGCGAAAAAGAAGGGCAACAGACATGTAGGAGTG
CCTATAAAGCTGTGGGCCGGCGGGAGGACAAGGAGGAAGAGGAGGAAGCC
CCGCGTGCCCTCCCTCTCCCGATTCGATTCCCTAATTTTCCCGTGCAGTC
TACAGAGGAGCAAGCTTTGCTGGAAAAGAGACTGGCGGACTTCGAGGAGC
TATATGAAGTCACGCGCCTGGCCATGCAGGCAACTGCAATGACCACTTCA
GCAGCAGCAGCAGCAGCAGCAGCAGCATTACCACCACCACCACCAGCAGC
AGTAGCAGCGGCAGCGGTAAGCGTCGGAGGGAGGAAGGGGAGAGAAGGGA
AAGAGGGATCAGCGGAGAGCCAAAATAAAATAGACTTTACGTTAGGGAGC
GTGGACGTATATCCTGGTCAGACGGCTCCGAGGACGGATGGCATAGGAGA
GGGGAAGGTGGGAGGAGGAAGTGGAGGTGGAGGAAGAGGCAGAGGCAGAA
TTCCGCCTATTCTGCCGCGGGCGACGACCCACCAAAGGAAAAAAAAAACG
ATGACGGCTCAACAAGGGAGGAGGAGCGCGACGTCGACCACCAAAAGCAA
CACCTTCGGTGATCGAGCTTTTACGCGCTTAGATCCTACGCAGTACCCCA
CGTCCGGGGTAAGCAATCCGCCTATGCTTCCTCCTACACGAGAACCCAAT
GATGGTGCTGGTGTGCAGGAGCCGCGGGACATTCGGGGCATATTTAAACC
GTTGATGACAGCAGAGCAGAAGGAGAGAGATAAGAGAGAGGAGGAGGAAG
AGGAGGAGGATGAGAGCGAGGAGGAAGAGGTGGGGGATGTGGAAGGGGAG
GAAAGTGTCAACGAAGAGAAAGGGAGCCTAGAAGAGATGGAAAGCAGCGA
AGGAGAGGAAGAAGAAAGTGGCGACTCCGAGCGTGGGGATTATGACTGTG
ATCATGATGATGATGAGGAGGAGGAGGAGTATGAGAGTGAGAATGAGACC
GAGAGCGAGGAGGAAGATTGGCTGGAGAACGAGTAAGAAGAGTCTTCTTA
ATAGAGAAGGCATGTTCAAGAAGAAAAAACCCAAATGTACG
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Coding sequence (CDS) from alignment at chr2:812622..814362+

>NO02G03030.1 ID=NO02G03030.1|Name=NO02G03030.1|organism=Nannochloropsis oceanica|type=CDS|length=1665bp|location=Sequence derived from alignment at chr2:812622..814362+ (Nannochloropsis oceanica)
ATGACCACGACAAGACGGCAACAAGGCGGCCACGACGCCAGCTTTTCCTC
CTCATTTTTCTCCCTCAGACACAAAGACGTCACTCGTGCATACGCTCCTG
CCTCTTATAGCCCCACCCAAATTGTTGAGGAGTGGAAACATATATTTGGT
CCGGGCAGCGACCTCTTTGAGCCCGGGGACCCCCGCGGCATTCTTGGCGG
TATCACCCCGCTAGAAGTCCGAAAGCAGCTAGATTTCCAGACCGCAGAAA
TCGAAAAGCTACGGGCGGAGGTGGTCGAGATGAGGAGATGTGTACACAAG
GAGCAACAAGAGCTTAAGTCACAAGTCATTTTTTTTGCCGCAAAGGCACG
CGCGGCGGCCCGTCAGGCCAAGTCGGAAGGCACCGATTCCTTGACGTTGC
AAAAGAAGGCACATGAACGAGAATTGGCACGTTTGCGCGAAGCCCACGAA
TACGAAATTACAGCTTGGAGGGATAGGGTAGAAGCGCTTGAGCGAGAGCA
GCAGCAACAGCAACCCTCATTCCCGATTCCACCCCCGTCCTCTTCTGGTC
GACCGCAGTCCTCTTCGGCGCGACTCCAATCAACCTCCTCCTCCTCGCCC
TCGAGACGTCCCTTTGGTTCCACCCAAATTCCGGCTACATCCATCTGCGA
AAAAGAAGGGCAACAGACATGTAGGAGTGCCTATAAAGCTGTGGGCCGGC
GGGAGGACAAGGAGGAAGAGGAGGAAGCCCCGCGTGCCCTCCCTCTCCCG
ATTCGATTCCCTAATTTTCCCGTGCAGTCTACAGAGGAGCAAGCTTTGCT
GGAAAAGAGACTGGCGGACTTCGAGGAGCTATATGAAGTCACGCGCCTGG
CCATGCAGGCAACTGCAATGACCACTTCAGCAGCAGCAGCAGCAGCAGCA
GCAGCATTACCACCACCACCACCAGCAGCAGTAGCAGCGGCAGCGGTAAG
CGTCGGAGGGAGGAAGGGGAGAGAAGGGAAAGAGGGATCAGCGGAGAGCC
AAAATAAAATAGACTTTACGTTAGGGAGCGTGGACGTATATCCTGGTCAG
ACGGCTCCGAGGACGGATGGCATAGGAGAGGGGAAGGTGGGAGGAGGAAG
TGGAGGTGGAGGAAGAGGCAGAGGCAGAATTCCGCCTATTCTGCCGCGGG
CGACGACCCACCAAAGGAAAAAAAAAACGATGACGGCTCAACAAGGGAGG
AGGAGCGCGACGTCGACCACCAAAAGCAACACCTTCGGTGATCGAGCTTT
TACGCGCTTAGATCCTACGCAGTACCCCACGTCCGGGGTAAGCAATCCGC
CTATGCTTCCTCCTACACGAGAACCCAATGATGGTGCTGGTGTGCAGGAG
CCGCGGGACATTCGGGGCATATTTAAACCGTTGATGACAGCAGAGCAGAA
GGAGAGAGATAAGAGAGAGGAGGAGGAAGAGGAGGAGGATGAGAGCGAGG
AGGAAGAGGTGGGGGATGTGGAAGGGGAGGAAAGTGTCAACGAAGAGAAA
GGGAGCCTAGAAGAGATGGAAAGCAGCGAAGGAGAGGAAGAAGAAAGTGG
CGACTCCGAGCGTGGGGATTATGACTGTGATCATGATGATGATGAGGAGG
AGGAGGAGTATGAGAGTGAGAATGAGACCGAGAGCGAGGAGGAAGATTGG
CTGGAGAACGAGTAA
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Synonyms
Publications