NO02G02930, NO02G02930 (gene) Nannochloropsis oceanica

Overview
NameNO02G02930
Unique NameNO02G02930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1563
Alignment locationchr2:788719..790281 -

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Properties
Property NameValue
DescriptionPre-mrna-splicing factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:788719..790281 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of NO02G02930 vs. NCBI_GenBank
Match: EWM30365.1 (pre-mrna-splicing factor [Nannochloropsis gaditana])

HSP 1 Score: 268.5 bits (685), Expect = 4.400e-68
Identity = 374/516 (72.48%), Postives = 389/516 (75.39%), Query Frame = 0
Query:    5 LADMILGNRKRTCDLYSAETASSALSPFLPTQKLKVAIKVNQEYNVPRASATAPPLPIQHEGEASSATSVDGGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAKVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKRW 521
            LADMILGNRKRTCDLY+AE  S    PFLP QKLKVA+KV+QEY +P +S T      + E EA+SA   +                                                         VAYKG                      XXXXXXX            PAKVPTPTWHAPWKLH+VVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FQ+LETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADK++KIWKEDAEA+ ETHP+DME WKQECL+HKRW
Sbjct:   29 LADMILGNRKRTCDLYTAEMTSGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGALVAYKGNDAGGAMVSRSNKRDGRTPPGAXXXXXXXIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 544          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: XP_005853739.1 (pleiotropic regulator 1 [Nannochloropsis gaditana CCMP526] >EKU22620.1 pleiotropic regulator 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 232.3 bits (591), Expect = 3.500e-57
Identity = 357/495 (72.12%), Postives = 371/495 (74.95%), Query Frame = 0
Query:   26 SSALSPFLPTQKLKVAIKVNQEYNVPRASATAPPLPIQHEGEASSATSVDGGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAKVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKRW 521
            S    PFLP QKLKVA+KV+QEY +P +S T      + E EA+SA   +                                                         VAYKG                     XXXXXXXX            PAKVPTPTWHAPWKLH+VVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FQ+LETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADK++KIWKEDAEA+ ETHP+DME WKQECL+HKRW
Sbjct:    3 SGTTPPFLPAQKLKVAVKVDQEYKIPCSSPTVHTSSTKQESEATSAPGNEETRHRGPSVLAGQGKAKGEATDTLNILNSLRNEEAERELRQYRGKYGGSRAASRGAVVAYKGNDAGGAMVSRSNKRDGRTPPGXXXXXXXXIGNSSALALHRTPAKVPTPTWHAPWKLHAVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFQRLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKTVKIWKEDAEASPETHPIDMEAWKQECLSHKRW 497          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: XP_009041625.1 (hypothetical protein AURANDRAFT_33675, partial [Aureococcus anophagefferens] >EGB03696.1 hypothetical protein AURANDRAFT_33675, partial [Aureococcus anophagefferens])

HSP 1 Score: 153.7 bits (387), Expect = 1.600e-33
Identity = 229/336 (68.15%), Postives = 245/336 (72.92%), Query Frame = 0
Query:  185 PTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKRW 521
            P WH PWKL +VV+GHLGWVR+VAF+P NEWF TG ADRTIK+WDLAKCAAGAEGG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NKV+RHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      E SF S                                                         FQKL T+ QPGSL CEAGIY + FD SG+R +TCEADK++KIWKED  AT ++ PVDM  W +EC   KR+
Sbjct:    1 PAWHPPWKLAAVVSGHLGWVRSVAFEPRNEWFATGGADRTIKIWDLAKCAAGAEGGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNKVVRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEFSFASGAADNIKKWQCKDGAFLRNLSGHDAIVNAVDVNDDGVLASAADDGSLRLWDYRTGYGFQKLHTVAQPGSLQCEAGIYDAKFDRSGSRLVTCEADKTLKIWKEDTHATPDSDPVDMAAWTKECRRLKRY 336          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: CBJ48535.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 150.6 bits (379), Expect = 1.300e-32
Identity = 230/342 (67.25%), Postives = 250/342 (73.10%), Query Frame = 0
Query:  178 APAKVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKR 520
            A    P P WHAPWKL SVV+ HLGWVRA+AFDP+NEWFVTGSADRTIKVWDLAK +AGAE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N+V+RHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           S                                                         FQ+++TI QPGSLD EAGI+AS+FD+SG+R +TCEADK++KIWKED EAT E+HP+DM  W ++  A KR
Sbjct:  182 AAPSAPRPEWHAPWKLSSVVSAHLGWVRAIAFDPSNEWFVTGSADRTIKVWDLAKASAGAEKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNRVVRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAADNMKKWQGRDGMFLNNMSGHNTIINSLSVNEDSVLVSGGDNGSLCLWDYATGYNFQRIDTIAQPGSLDAEAGIFASSFDVSGSRLVTCEADKTVKIWKEDLEATPESHPIDMVAWAKDYQARKR 523          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: XP_004333965.1 (WD domain, Gbeta repeat-containing protein [Acanthamoeba castellanii str. Neff] >ELR11952.1 WD domain, Gbeta repeat-containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 116.7 bits (291), Expect = 2.200e-22
Identity = 217/327 (66.36%), Postives = 234/327 (71.56%), Query Frame = 0
Query:  185 PTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWK 512
            P WHAPWKL  V++GHLGWVR+VA DP NEWFVTGSADRTIK+WDL      A G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +HP+E +F S                                                         +Q+ +TIVQPGSLDCEA +YA  FD +G+R +TCEADK+IK+WKED +ATEETHPV    WK
Sbjct:  152 PEWHAPWKLMRVISGHLGWVRSVAVDPGNEWFVTGSADRTIKIWDL------ASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHPREYTFASASADNIKKWKLPKGDFLHNLPGHNTIVHSMAINEDGVLVTGGDDGSLCFWDWKTGHLYQRTQTIVQPGSLDCEAAVYAMTFDQTGSRLITCEADKTIKVWKEDEDATEETHPVQ---WK 469          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: OEU22247.1 (WD40 repeat-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 114.8 bits (286), Expect = 8.200e-22
Identity = 219/339 (64.60%), Postives = 243/339 (71.68%), Query Frame = 0
Query:  181 KVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKR 520
            K+PTPTWHAPWKL +V++ HLGWVR++A DP N+ F TGSADRTIK+WDLAK + GA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N+VIRHY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXX                                                    FQ   +IVQPGSLD E  I+ + FD +GTR +T EADK+IKI+K D EA+E T P+DM GW+++C+   +
Sbjct:  159 KIPTPTWHAPWKLSTVLSSHLGWVRSIAMDPTNDMFATGSADRTIKLWDLAKASVGASDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNQVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKYWQAKDGKFLKSYSGHKAVVNAMAVNDDGVLVSGGDDGSMHFWDYKTGYNFQSGTSIVQPGSLDAENAIFCAEFDGTGTRLITGEADKTIKIYKADEEASEMTDPIDMVGWRKKCIKESK 497          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: EPZ33559.1 (Ribosomal protein S6e domain-containing protein, partial [Rozella allomycis CSF55])

HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21
Identity = 90/343 (26.24%), Postives = 106/343 (30.90%), Query Frame = 0
Query:  178 APAKVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHY---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWK 512
            A  + P P WHAPWKL  V++GH+GWVR++A D +NEWF TGSADRTIK+WD+A                                                   VIRHY                                                                                                      L VHP E SF S                                                         FQ +ETIVQPGSLD EAGI+AS FD +G R LTCEADK+IKI+KED  AT E+HP+    WK
Sbjct:  378 AAPRTPKPKWHAPWKLMRVISGHIGWVRSIAVDSSNEWFATGSADRTIKIWDMAS----------------GTLKVSLTGHISAVRGIAISDRHPYLFSVGEDKMVIRHYHGHLSGIYAVDIHPTLDLLVTAGRDCTARVWDMRTRQAAHVLAGHQGTIASVKTQATDPQIITGSHDSTGKRNMKICLVRLWDLAAGKTISTLTHHKKSVRSLTVHPLESSFASASPDNIKRFSLPDGKFLFNYSGHKAVVNTVSVNQDDVMFSGGDNGSMHFWDWKSGYNFQTMETIVQPGSLDAEAGIFASTFDKTGLRLLTCEADKTIKIYKEDELATPESHPIQ---WK 701          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: XP_002287354.1 (hypothetical protein THAPSDRAFT_31822, partial [Thalassiosira pseudonana CCMP1335] >EED94797.1 hypothetical protein THAPSDRAFT_31822, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21
Identity = 217/337 (64.39%), Postives = 240/337 (71.22%), Query Frame = 0
Query:  183 PTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKR 520
            PTP WH+PWKL +V++ HLGWVR+VAFDP N  F TG +DR IK++DLAK    A   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N+VIRHY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXX                                                    FQ   T+ QPGSLD E GI+A+ FD++GTR +TCEADK+IKIWKED  A+E THP+DM  W+++C+A  +
Sbjct:    1 PTPKWHSPWKLSTVLSSHLGWVRSVAFDPTNTLFATGGSDRVIKIFDLAKACVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNQVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKWVGNDGRFIKNFTGHKAVINALAVNDDGILLSAADDGTMNFWDYGSGHCFQTSTTVAQPGSLDAENGIFAAEFDLTGTRLVTCEADKTIKIWKEDDTASELTHPIDMTKWRKKCIAEAK 337          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: EFH59275.1 (PP1/PP2A phosphatases pleiotropic regulator 2 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 112.1 bits (279), Expect = 5.300e-21
Identity = 195/335 (58.21%), Postives = 219/335 (65.37%), Query Frame = 0
Query:  179 PAKVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQ 513
            P++ P P WHAPWK + V+ GHLGWVR+VAFDP+NEWF TGSADRTIK+WD+A        G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + +HPKE +FVS                                                          FQ+ ETIVQPGSL+ EAGIYA+ +D +G+R +TCEADK+IK+WKED  AT ETHP++ +  K+
Sbjct:  148 PSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVAT-------GVLKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQIFVLPHNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTVRAMALHPKENAFVSASADNIKKFSLPKGEFCHNMLSLQRDTINAVAANEDGVMATEGDKGGLWFWDWKSGHNFQQAETIVQPGSLESEAGIYAACYDRTGSRLVTCEADKTIKMWKEDENATPETHPLNFKPPKE 475          
BLAST of NO02G02930 vs. NCBI_GenBank
Match: OQR98184.1 (pre-mRNA-splicing factor prp46 [Achlya hypogyna])

HSP 1 Score: 112.1 bits (279), Expect = 5.300e-21
Identity = 229/340 (67.35%), Postives = 241/340 (70.88%), Query Frame = 0
Query:  181 KVPTPTWHAPWKLHSVVAGHLGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNKVIRHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVHPKELSFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATEETHPVDMEGWKQECLAHKRW 521
            +VP P WHAPWKL  V+AGHLGWVR+VA DP NEWFVTGSADRTIKVWDL      A   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXX                                                 FQK  TIVQPGSLD EAGIYA+ FD +G RF+T EADK+IK+W+EDA AT ETHP+DM  W +E  A KR+
Sbjct:  159 EVPKPQWHAPWKLKRVIAGHLGWVRSVAVDPTNEWFVTGSADRTIKVWDL------ASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQTRDGKFLRNFSGHNAIVNAVAMNQDNVAVSCADNGTMRFWDYTTGYNFQKEATIVQPGSLDSEAGIYAATFDKTGLRFITAEADKTIKVWQEDASATPETHPIDMAAWTKEYTAPKRF 492          
The following BLAST results are available for this feature:
BLAST of NO02G02930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30365.14.400e-6872.48pre-mrna-splicing factor [Nannochloropsis gaditana... [more]
XP_005853739.13.500e-5772.12pleiotropic regulator 1 [Nannochloropsis gaditana ... [more]
XP_009041625.11.600e-3368.15hypothetical protein AURANDRAFT_33675, partial [Au... [more]
CBJ48535.11.300e-3267.25conserved unknown protein [Ectocarpus siliculosus][more]
XP_004333965.12.200e-2266.36WD domain, Gbeta repeat-containing protein [Acanth... [more]
OEU22247.18.200e-2264.60WD40 repeat-like protein [Fragilariopsis cylindrus... [more]
EPZ33559.13.100e-2126.24Ribosomal protein S6e domain-containing protein, p... [more]
XP_002287354.13.100e-2164.39hypothetical protein THAPSDRAFT_31822, partial [Th... [more]
EFH59275.15.300e-2158.21PP1/PP2A phosphatases pleiotropic regulator 2 [Ara... [more]
OQR98184.15.300e-2167.35pre-mRNA-splicing factor prp46 [Achlya hypogyna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006939NSK006939Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02930.1NO02G02930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574503gene_880Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g10gene294Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02930.1NO02G02930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02930 ID=NO02G02930|Name=NO02G02930|organism=Nannochloropsis oceanica|type=gene|length=1563bp
ATGTCGTCTTCTCTGGCGGACATGATACTGGGCAACAGGAAGCGGACATG
CGACCTGTACAGCGCCGAGACCGCCAGTAGCGCCCTGTCGCCCTTCTTGC
CCACGCAAAAGCTTAAAGTGGCCATAAAGGTCAATCAAGAATATAACGTT
CCTCGCGCGTCCGCCACGGCTCCACCACTCCCCATTCAACACGAAGGCGA
GGCCTCATCCGCCACAAGTGTCGATGGGGGTCCTCTGGGTGCAGCAGCGG
CGGCGGCGGGCGTGGGTAAGTCGAAGAAAGATGCCACTGACACACTCAAC
ATCCTCAATTCGTTGCGGCACGAGGAGGAAGAGAGGGAGCTGCAGCATTA
CCGAGGCAGCAACGGCGGGTCCCGCGCTGCAAGCGGCGGGTCATTGGTCG
CATACAAAGGCAGCAGTACAAGCGGTACCATGGTCACAAGTACGCGCACT
GCCGCCGAAGCTCCACCAGGCGCAGCAGCAGCGGCGGCGGCGGGTATTGG
TACGGCGTCGACAGCGCTGGCACTGAAGCGTGCTCCTGCCAAGGTACCGA
CGCCTACTTGGCATGCGCCCTGGAAGCTGCACTCAGTGGTGGCAGGTCAT
TTGGGATGGGTACGTGCTGTAGCTTTTGATCCAGCGAATGAGTGGTTCGT
CACGGGCTCGGCGGATCGAACCATTAAGGTCTGGGACCTCGCCAAGTGCG
CGGCAGGGGCGGAGGGAGGGTTAAGACTGACGTTGACAGGGCACATTTCT
GCCGTAAGGGCCTTGGCAGTGTCGAATCGGCACCCGTATTTGTTCTCGGC
CGCAGAGGATAAGACGGTGAAATGTTGGGATTTGGAGCAGAACAAGGTGA
TTCGTCACTATCATGGCCATTTGTCGGGTGTGTATAGCTTGGCTTTGCAC
CCCACCCTTGATATTTTAGTGACGGGAGGGAGGGATTCTGTGGCCCGCGT
GTGGGATATGCGGACAAAGATGCAGGTACATGTGTTGGGGGGGCACACGA
ATACGGTAGGGGTTGTAGCGACAAATTCTGTGGACCCCCAGGTTATAACG
GGGTCGTATGATAGCACGATTAAATTGTGGGATATAATCGCGGGGAAGAG
TATGGCGACCTTGACCAATCACAAAAAGGCCGTGCGTGATCTGAAGGTGC
ACCCGAAGGAGCTGTCTTTTGTGTCTGGGGCACAGGATAACCTCAAGAAG
TGGCAAGTGAGGGATGGAAAGTTTTTGAAGAACCTAAGTGGGCACAATGC
GGTGATCAACTCTCTGGCCGTGAATGAAGATAATGTGCTGGTCTCATGTG
GGGACAATGGAAGTTTGCGGTTTTGGGATTACCAGACTGGGTATTGCTTC
CAGAAATTGGAGACGATAGTCCAGCCGGGGAGTTTGGATTGCGAGGCGGG
GATATATGCGTCGGCGTTTGATATGAGTGGCACGAGATTTTTGACTTGTG
AAGCGGACAAGTCGATCAAGATTTGGAAGGAGGATGCGGAGGCAACGGAG
GAGACGCACCCAGTGGATATGGAGGGGTGGAAGCAGGAGTGTTTGGCGCA
TAAGCGATGGTAG
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protein sequence of NO02G02930.1

>NO02G02930.1-protein ID=NO02G02930.1-protein|Name=NO02G02930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MSSSLADMILGNRKRTCDLYSAETASSALSPFLPTQKLKVAIKVNQEYNV
PRASATAPPLPIQHEGEASSATSVDGGPLGAAAAAAGVGKSKKDATDTLN
ILNSLRHEEEERELQHYRGSNGGSRAASGGSLVAYKGSSTSGTMVTSTRT
AAEAPPGAAAAAAAGIGTASTALALKRAPAKVPTPTWHAPWKLHSVVAGH
LGWVRAVAFDPANEWFVTGSADRTIKVWDLAKCAAGAEGGLRLTLTGHIS
AVRALAVSNRHPYLFSAAEDKTVKCWDLEQNKVIRHYHGHLSGVYSLALH
PTLDILVTGGRDSVARVWDMRTKMQVHVLGGHTNTVGVVATNSVDPQVIT
GSYDSTIKLWDIIAGKSMATLTNHKKAVRDLKVHPKELSFVSGAQDNLKK
WQVRDGKFLKNLSGHNAVINSLAVNEDNVLVSCGDNGSLRFWDYQTGYCF
QKLETIVQPGSLDCEAGIYASAFDMSGTRFLTCEADKSIKIWKEDAEATE
ETHPVDMEGWKQECLAHKRW*
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