NO02G02600, NO02G02600 (gene) Nannochloropsis oceanica

Overview
NameNO02G02600
Unique NameNO02G02600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1934
Alignment locationchr2:722906..724839 -

Link to JBrowse

Properties
Property NameValue
Descriptionsyntaxin of plants 71
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:722906..724839 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR015260Syntaxin-6_N
Homology
BLAST of NO02G02600 vs. NCBI_GenBank
Match: EWM30416.1 (hypothetical protein Naga_100026g43 [Nannochloropsis gaditana])

HSP 1 Score: 419.5 bits (1077), Expect = 8.600e-114
Identity = 215/286 (75.17%), Postives = 258/286 (90.21%), Query Frame = 0
Query:    1 MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPMEESEAFQGPMGAMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKN 287
            +DAELETLL VL+DIQ+AVGGKV K  KEGGKVDKFMD+KQTMIAR+++V++LIA+T++QT GQE+QPK+VIA+NAQ+RE++RQL ED KEL+RLF KE+NKRKSKF+PEELE+RG++V+QM+ E+QELKE+SLAGYIRK N T     GL  P+EES+AF+GP+G +PM T MTE H++QLQQIQQRDKD+D  YLDQIE+GVEDLRDIALRANEG++TTNVMLENLEQKII VQDHLDRVNKKMK TL QVGRRSDKLCID++CIVILLGMIG++YNL KNSKN
Sbjct:   52 VDAELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNT-PGAVGLFAPVEESDAFRGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNSKN 336          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: XP_002297005.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86733.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 167.9 bits (424), Expect = 4.500e-38
Identity = 114/311 (36.66%), Postives = 172/311 (55.31%), Query Frame = 0
Query:    2 DAELETLLAVLNDIQKAVGGK------------------VVKKAKEGGKV-DKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNM-------AGLIVPMEESEAFQGPMG------AMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNL 281
            D EL  LL  L DIQ+ VG K                  V+ K K+G K   +F+++K  ++ R+  V  LI     Q+  +   PKE IA+ A++RE +RQ ++++ EL  L+ KE  K+KSKF  EELE++  +V Q+  E++++KE  L GY    N +GN M        G +  ++  +   G  G      + P  T +T   +VQLQQI+ RD + D+  LDQI  G++DL ++A R  E V+  NVML  +  KI +  +H+  VN KMK TL +VGR SDKLC+DI+CI++ +G   + Y +
Sbjct:   59 DEELTLLLTKLYDIQEQVGAKEKSSKEDKLSRAQQAGQVVMGKGKKGQKKGSRFLELKSNIVDRLKSVHSLI---EEQSNSKRNNPKEAIAAQAEIRELIRQASDEWSELNELYKKEARKKKSKFTSEELELQQALVMQLNVEIEKVKEAQLQGY---ANRSGNGMDEGVRLNLGALAALDAVDISSGGEGNSKAWQSGPSGTALTGSQQVQLQQIRDRDAEFDQD-LDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFYKM 362          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: EJK63107.1 (hypothetical protein THAOC_16253 [Thalassiosira oceanica])

HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37
Identity = 112/311 (36.01%), Postives = 166/311 (53.38%), Query Frame = 0
Query:    4 ELETLLAVLNDIQKAVGGK-------------------VVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGN---NMAGLIV----------PMEESEAFQGPMGAMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMK 283
            EL  LL  L  IQ+ VG K                   + K  K   K  +F+++K  ++A +  V  LI     Q+    L PK+ I + A++RE +RQ ++++ EL  ++ KE  K+KSKF  EELEV+  +V Q+ +E+ ++K+    GY R G    N   N+  L            P     A+Q   G     T +T + +VQLQ IQ RD + D+  LD+I  G++DL ++ALR  E VR  N ML+  EQ++   Q+H+  VN KMK TL +VGR SDKLC+DI+CIV+++G   + Y L K
Sbjct:    8 ELNNLLTKLYTIQEQVGAKEKTTDDEKKQRAADAGHISMGKGRKGQKKGSRFLELKSNIVAGLKNVHSLI---EQQSNAVSLNPKDSITAQAEIREVIRQASDEWNELNEIYKKEARKKKSKFTEEELEVQQALVMQLKQEIDKVKDAQQGGYARGGATLQNSQLNLGALAALDAADLSSNDPSGGGRAWQSGTG----GTALTGNQQVQLQAIQDRDAEFDKD-LDEIGDGIQDLHELALRQGEEVRRQNEMLKGTEQRMDQAQEHMTNVNAKMKDTLNEVGRSSDKLCVDIMCIVMMMGFAAVFYQLSK 310          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: XP_002178744.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49442.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 137.1 bits (344), Expect = 8.500e-29
Identity = 98/313 (31.31%), Postives = 154/313 (49.20%), Query Frame = 0
Query:    2 DAELETLLAVLNDIQKAVGGK----------------VVKKAKEG-GKVDKFMDVKQTMIARIVEVRKLIATT--RNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGN---VTGNNMAGLIVPMEES------EAFQGPMGAMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKN 287
            D EL  LL  L  IQ+ +G K                V+ + K+   K  KF+D+K T++ R+  +  L+  T  + Q        K++I   A VRE+LRQ  +++KE++ ++ KE  K+KSKF PEELEV+ ++V ++  E+ ++KEV + GY R          N   L      S                                    D D D+  LD+I  G+ DL +IA    E V+  +VML+ +  K+  V + +  VN KMK TL +VGR +DKLC+DI+C+V+++G   ++YN++ N  N
Sbjct:    9 DDELTELLTKLYTIQEEIGAKPKSSEDEKRAKAENVAVMGQGKKAQAKGSKFLDLKSTILDRLKTIHGLLKATKEKEQAGFGGDNAKDIIKMQANVREHLRQATDEWKEMDEIYKKEARKKKSKFTPEELEVQSELVRRLYAEIDKVKEVQMRGYTRSRQPDAAVSLNTKALYTDSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADFDKQ-LDEIGEGILDLAEIAALQGEEVKRQSVMLDGVNNKMDKVGERMTSVNSKMKETLDEVGRSADKLCVDIMCVVLMVGFAAVIYNMVSNDSN 320          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: OEU09517.1 (hypothetical protein FRACYDRAFT_173608 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 134.8 bits (338), Expect = 4.200e-28
Identity = 93/304 (30.59%), Postives = 161/304 (52.96%), Query Frame = 0
Query:    2 DAELETLLAVLNDIQKAVGGK-------------------VVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTR--NQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPMEESEAFQGPMGAMPM------NTGMTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLY 279
            D E+  LL  L  IQ+ +G K                     KK+++ G   KF+++K  ++ R+  + +L+  T+            K++I   A+ RE +RQ  ++++ELE ++ KE  K+KSKF PEELEV+ ++V ++  E++++K+  + GY R  +   +    L       +   G  G  P        T +T D + Q+ Q+++RD D D   LD+I  G+ DL +IA +  E VR  + ML+ +++K+    + +  VN +MK TL++VGR  DK+ IDI+CIV+ +G   ++Y
Sbjct:    8 DEEITDLLTKLYSIQEDIGAKPKTSENEKREKAENVSKMGTTKKSEKKG--SKFLELKSKIVDRLRSIHQLLKDTKALEGAGYGGNNAKDIIKMQAETREQVRQATDEWRELEAIYKKEARKKKSKFTPEELEVQSELVKRLYAEIEKVKDAQMKGYAR--SRVPDAATALNTKALSYDPSAGKSGGKPSWSGTGGGTALTGDQKQQMLQLEERDADFDLQ-LDEIGEGILDLAEIAQQQGEEVRLQSQMLDQVDKKLDKNLERMTTVNSRMKETLEEVGRAGDKVMIDIMCIVLAIGFGAVIY 306          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: XP_009516680.1 (hypothetical protein PHYSODRAFT_249260 [Phytophthora sojae] >EGZ29405.1 hypothetical protein PHYSODRAFT_249260 [Phytophthora sojae])

HSP 1 Score: 131.0 bits (328), Expect = 6.100e-27
Identity = 91/318 (28.62%), Postives = 160/318 (50.31%), Query Frame = 0
Query:    1 MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPMEESEAFQGPMGAMPMNTG-------------------------------MTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKNS 288
            M+ EL+ LL  L+ I + +GG+  K  K+  K D+F ++K  +  R+  ++  +         +   P+E I    ++RE +R +  D K+L   +  E  K+KSKF+PEEL +R ++V Q   E + +KE++   Y      T  +  G+  P+   E       A P+  G                               +T+D R  L  IQ+ D+  D + ++QI  GV++L   A   NE ++   +M++ L ++I   Q H++ VN+KMK TL++VGR +DK  +D+IC+++LLG++ ++YN+     +S
Sbjct:    1 MNRELDGLLDKLSRINQEMGGEDGKGKKKDKKGDQFHELKTKIGERLHHLKMTLQDNEVAATKRGKHPREAIRRQQEIREEIRLVGVDIKDLTASYDLEMKKKKSKFSPEELAMRKEIVTQYWAEYERIKELAAVNYRSPAGRTTFDTGGVAAPIGSFENGAFTARARPVAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXEREVVTDDQRAMLADIQRNDQRFD-NMIEQIGTGVQELGQQARMLNEELQQQAIMIDGLSERIDTTQAHVESVNRKMKKTLEKVGRGADKCMMDMICLILLLGILAVVYNMFIKKDSS 317          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: ETO63594.1 (hypothetical protein F444_18739 [Phytophthora parasitica P1976])

HSP 1 Score: 130.2 bits (326), Expect = 1.000e-26
Identity = 96/306 (31.37%), Postives = 160/306 (52.29%), Query Frame = 0
Query:    1 MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPME--ESEAFQG---PMGA--------------------MPMNTG-MTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNL 281
            M+ EL+ LL  L+ I + +GG   K  K+  K D+F D+K  +  R+  ++  +         +   P+E I    ++RE +R +  D K+L   +  E  K+KSKF PEEL +R ++V Q   E + +KE++ A Y      T  +  G+  P+   E+ AF     P GA                     P+    +T+D R  L  IQ+ D+  D + ++QI  GV++L   A   NE ++   +M++ L ++I + Q H++ VNKKMK TL +VGR  DK  +D+IC+++LLG++ ++YN+
Sbjct:    1 MNRELDGLLDKLSRINQEMGGDDGKSKKKDKKGDQFHDLKTKIGERLHHLKMTLQDNDMAATKRGKHPREAIRRQQEIREEIRLVGVDIKDLTASYDLEMKKKKSKFPPEELAMRKEIVTQYWAEYERIKELAAANYRSPAGRTAFDTGGVAAPIGSFENGAFTARATPGGATGGPVFXXXXXXXXXXXXXXXPIEREVVTDDQRAILADIQRNDQRFD-NIIEQIGTGVQELGQQARMLNEELQQQAIMIDGLGERIDNTQAHVESVNKKMKETLTKVGRGPDKCMMDMICLILLLGILAVVYNM 305          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: XP_002901684.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58740.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 124.4 bits (311), Expect = 5.700e-25
Identity = 93/309 (30.10%), Postives = 156/309 (50.49%), Query Frame = 0
Query:    1 MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPME--ESEAFQ------GPM-------------GAMPMNTG-MTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKNS 288
            M+ EL+ LL  L+ I + +GG   K  K+  K D+F D+              +         +   P+E I    ++RE +R +  D K+L   +  E  K+KSKF+PEEL +R ++V Q   E + +KE++ A Y         +  G+  P+   E+ AF       GP+                P+    +T+D R  L  IQ+ D+  D + ++QI  GV++L   A   NE ++   +M++ L ++I + Q H++ VNKKMK TL +VGR  DK  +D+IC+++LLG++ ++YN+     +S
Sbjct:    1 MNRELDGLLDKLSSINQEMGGDDGKSKKKDKKGDQFHDLXXXXXXXXXXXXXXLQDNDAAATKRGKHPREAIRRQQEIREEIRLVGVDIKDLTASYDLEVKKKKSKFSPEELAMRKEIVTQYWAEYERIKELAAANYRSPAGRPAFDTGGVAAPIGSFENGAFTARTRPGGPVFGGXXXXXXXXXXXXXPIEREVVTDDQRAILADIQRNDQRFD-NIIEQIGTGVQELGQQARMLNEELQQQAIMIDGLGERIDNTQAHVESVNKKMKETLTKVGRGPDKCMMDMICLILLLGILAVVYNMFIKKDSS 308          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: CBN78535.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus])

HSP 1 Score: 124.0 bits (310), Expect = 7.500e-25
Identity = 96/297 (32.32%), Postives = 155/297 (52.19%), Query Frame = 0
Query:    2 DAELETLLAVLNDIQKAVG-----GKVVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIA-TTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPMEESEAFQ--------GPMGAMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNS 285
            D E++ LL+ L  IQ AVG                  D+F  VK  +I R+ +   L+A    ++ P   +Q K  + SN      LR L E++K+L+  +  EK+KR+SK   EELE + Q++  +  E+ ELK +  AG +  G   G    G    M  SE F+          +   P    +T +  V++QQI+ R K+M+  YL  +E  V+ L ++A    E ++  + M+++L  +I   Q+H+  VN +MK  L+ V R +DK C+DI+CI++LLGMI +LY ++K +
Sbjct:    6 DREVDLLLSKLRKIQAAVGXXXXXXXXXXXXXXXXXXDRFNAVKSAIIKRLGDTCDLLAKEPASKDPTAVIQKKNAVQSN------LRALEENWKQLDSAYQAEKSKRRSKITREELENQRQLLVDLRHEIGELKSIHQAGVV--GAKGGGTRGGYGTAMPASEFFKQEARTGGTTSVAEAPPPGKLTSEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNV-RSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of NO02G02600 vs. NCBI_GenBank
Match: OWZ09496.1 (hypothetical protein PHMEG_00017791 [Phytophthora megakarya])

HSP 1 Score: 118.6 bits (296), Expect = 3.100e-23
Identity = 90/311 (28.94%), Postives = 155/311 (49.84%), Query Frame = 0
Query:    1 MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEVRKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEKNKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAGLIVPME--ESEAFQG-----PMGAMPMNTGM-----------------TEDHRVQLQQIQQRDKDMDRHYLDQIERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTLQQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKNS 288
            M+ EL+ LL  L+ + + +GG   K  ++  K D+F ++              +         +   P+E I    ++RE +R +  D K+L   +  E  K+KSKF PEEL +R ++V Q   E + +KE++ A Y         ++ G+  P+   E+ AF         G  P+  G+                 T+D R  L  IQ+ D+  D + ++QI  GV++L   A   NE ++   +M++ L ++I +   H++ VNKKMK TLQ+VGR  DK  +D+IC+++LLG++ ++YN+     +S
Sbjct:    1 MNRELDGLLDKLSRLNQEMGGDDGKNKQKDKKGDQFHELXXXXXXXXXXXXMTLQDNDVAATKRGKHPREAIRRQQEIREEIRLVGVDIKDLTASYDFEMKKKKSKFPPEELAMRKEIVTQYSVEYERIKELAAANYRSPAGRPTFDIGGIAAPIGSFENGAFTARKSGIATGGSPVFGGLGAGGGAGGDGQIEREVVTDDQRAILADIQRNDQRFD-NMIEQIGTGVQELGLQARMLNEELQQQAIMIDGLGERIENTHAHVESVNKKMKDTLQKVGRGPDKCMMDMICLILLLGILCVVYNMFIKKSSS 310          
The following BLAST results are available for this feature:
BLAST of NO02G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30416.18.600e-11475.17hypothetical protein Naga_100026g43 [Nannochlorops... [more]
XP_002297005.14.500e-3836.66predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK63107.12.900e-3736.01hypothetical protein THAOC_16253 [Thalassiosira oc... [more]
XP_002178744.18.500e-2931.31predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU09517.14.200e-2830.59hypothetical protein FRACYDRAFT_173608 [Fragilario... [more]
XP_009516680.16.100e-2728.62hypothetical protein PHYSODRAFT_249260 [Phytophtho... [more]
ETO63594.11.000e-2631.37hypothetical protein F444_18739 [Phytophthora para... [more]
XP_002901684.15.700e-2530.10conserved hypothetical protein [Phytophthora infes... [more]
CBN78535.17.500e-2532.32Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
OWZ09496.13.100e-2328.94hypothetical protein PHMEG_00017791 [Phytophthora ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006906NSK006906Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02600.1NO02G02600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574350gene_850Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g43gene262Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02600.1NO02G02600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02600 ID=NO02G02600|Name=NO02G02600|organism=Nannochloropsis oceanica|type=gene|length=1934bp
ACAGGCTCCACTGATACCACCACTCTCACGCGGTCTCGGCACCCACATCA
TCGATCAACCATATCTAATATGGATGCAGAGCTCGAGACTTTGCTTGCAG
TCCTCAACGACATTCAGgtacgatgtcccgtagtttggcaaaaagcacag
ggctctaaaagtgctcctacatccttcgtttgctcttgccccttgtacgc
ctgctcacatcaaaccacattcccaccaattacagAAAGCAGTGGGAGGC
AAGGTCGTGAAGAAGGCCAAAGAGGGCGGCAAGGTGGATAAGTTCATGGA
CGTCAAGCAGACCATGATCGgtgcgtttgactggaaaagccgggaggaag
agagcgagaaggaagagaaggggggggaatgaaattgttttataaaaggg
aaggaggcggggggggggttacgtatggataggatggtagcacatgcgga
actttttgtttgctgcttacacaaagtgcgcgggctctccctaaaaaata
aagtcagatgggcagtgctaaagcactgcttcctctctcaaaattatgcc
atcaaatgtaatacccgctcattcctccagcaactccccataacccttat
cacagCACGCATTGTGGAGGTACGAAAGCTCATAGCCACGACCAGGAATC
AGACGCCGGGTCAAGAACTGCAACCCAAGGAAGTCATCGCCTCCAATGCC
CAAGTCCGAGAGTACCTGCGGCAGTTGAACGAGGACTACAAGGAATTGGA
ACGATTGTTTTCGAAGGAAAAGAACAAGCGGAAGgtaaggggaagcaaag
ggaggaggagagatgactgtggtggtgacaatctgagagactgcttctgt
gcaggtattgagtgacgtggaagcacacgcgatagagctctcactctggc
tttgcgtccttaatttgcttgcatatacagAGCAAATTTGCACCGGAAGA
GCTGGAGGTGCGGGGGCAGGTGGTAAATCAGATGCTGAGGGAGGTACAAG
AATTGAAGGAGGTCTCTCTGGCCGGCTATATTCGGAAAGGCAATGTCACT
GGGAATAACATGGCAGGCCTGATCGTGCCGATGGAGGAGTCGGAGGCGTT
CCAAGGGCCGATGGgtacgttaattttctctgctttggattgccgtaatc
cacgtctctatgaagctgcgtctttcttgcattggttccctcaacgggca
actctcgaatgtcaattagctcgttttcgtcccccctccctcctaccttc
tctccctacgtagGCGCGATGCCCATGAACACAGGCATGACCGAAGACCA
CCGTGTGCAGTTGCAACAGATCCAACAGCGTGATAAGGATATGGACAGAC
ATTACCTCGATCAGATCGAGAGGGGCGTGGAGGACTTGAGAGATATAGCG
CTGAGGGCGAATGAGgtgagggatgggggggggtagggttggaagggaag
gaaggaaagtataccataattgaaatacccatttctccctccccccctcc
ctccctctctgcatgcttatcttagGGGGTTCGAACGACCAACGTGATGC
TCGAAAACCTCGAGCAAAAAATCATCGATGTCCAGGATCACCTCGATCGC
GTGAACAAAAAGATGAAGACGACCCTGCAGCAGGTTGGGCGACGGTCAGA
TAAGCTGTGCATCGACATCATTTGTATTGTAATTCTGCTGGGGATGATTG
GCTTGTTGTATAACCTGATGAAGAACAGTAAGAATTCTTGAGAATGAGCT
GCAGCGGTAGGAGCAGCAGATGTGGGATTTTGGAGTGGGGAGGGGGTGTG
GGTTTGGTTATCATGCAAAGAGGGAGGGGAGGAGGACGATAGTACAGAAG
ATGGGGCGTGCGAGAAAAAATCAAGCAAACGACTTCACGACAGTGCAATC
TGATCAGACGATTTCGATCCATCAATAAAACGTG
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protein sequence of NO02G02600.1

>NO02G02600.1-protein ID=NO02G02600.1-protein|Name=NO02G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEV
RKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEK
NKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAG
LIVPMEESEAFQGPMGAMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQI
ERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTL
QQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKNS*
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Synonyms
Publications