NO02G02510, NO02G02510 (gene) Nannochloropsis oceanica

Overview
NameNO02G02510
Unique NameNO02G02510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2008
Alignment locationchr2:692310..694317 -

Link to JBrowse

Properties
Property NameValue
DescriptionTbc1 domain member 20
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:692310..694317 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_004991292.1 (hypothetical protein PTSG_08266 [Salpingoeca rosetta] >EGD76921.1 hypothetical protein PTSG_08266 [Salpingoeca rosetta])

HSP 1 Score: 153.7 bits (387), Expect = 1.300e-33
Identity = 111/317 (35.02%), Postives = 170/317 (53.63%), Query Frame = 0 
Query:    3 EDARRNGRSTSMAQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRLHGHPFLRDLARKKEVHA 320
            +  RR G S    QR + +   +    V +E L+ LA   G GF    +R V W +LLG+N   +  +F D    N +S QI  DV RSLW Y        +R + R+ L+K+INALM+K+P LHYYQG HDV++V  L+  ++DD  F +  R+   +L  +    D S +TP++ L L L++  D  +   L    I     + WV+ W++H  ++ +   R+FDA L+  P F +YLAAA++L    +L ALE  DF++V+  L++L     L  E ++A A  L   + PA+L+RL      R + R  +V A
Sbjct:   16 QKVRRRGGSKQHKQRHQDVLAAVQGPHVDVEALQRLAFEKG-GFLTATVRKVAWCRLLGVNP-GATATFPD-CLDNTYSKQIKLDVDRSLWQY----TSDSEREAMRQRLSKIINALMTKYPDLHYYQGLHDVVAV-PLIELDNDDATFNIMCRLCRCHLKAF-MGSDLSTVTPVMHLTLVLIQQRDIPLFRFLSNAQIGGEFTISWVVTWFSHVLNHHQDRCRVFDACLASHPYFVVYLAAAIVLSQSEQLQALE-CDFASVYQHLTKLG---PLDWEAVLADAKSLEDEIAPARLLRLCDKAEFRRMLRTSDVDA 319
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_002906542.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65943.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 151.0 bits (380), Expect = 8.500e-33
Identity = 98/272 (36.03%), Postives = 151/272 (55.51%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNR--FESQP-SFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVR 302
            ++R LA+ P  G  ++  R  +WP LLG+      ++P +  D V  ++ + Q+ +DV RSLWHY  +   K+ +R ++RR L ++I   +S +  L Y+QG+HD++SV +L +        AV + V+  Y  +   RP F  +     LL PL++AAD  +   LRA G+  +  LPW+I W+AH         RLFD FL   PLF LY++A ++LEA+ ++   E  DF  +H  LS L    D  VE +IARA  L   LPP +L++
Sbjct:   62 EVRRLAITP-KGLVSDEFRRDLWPFLLGIGEATHNTRPVTNSDLVEVHRDAAQVEKDVERSLWHYDVLQGIKESERRAKRRALTQIILGALSANDELFYFQGYHDIVSVFLLTLGSSPTTMQAV-QNVSETYQRE-PMRPGFEQVMATTRLLFPLLDAADELLFQHLRASGVEPFFALPWMITWFAHQLKRFGDVKRLFDVFLVTHPLFSLYVSAGVVLEARDKILRCE-SDFGTMHGMLSNLPLSMD--VEKVIARALVLFHQLPPEQLIK 327
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETO69363.1 (hypothetical protein F444_14066 [Phytophthora parasitica P1976])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAEAHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTIHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETO69364.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETO69365.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAEAHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTIHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETO69366.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETO69367.1 hypothetical protein, variant 4 [Phytophthora parasitica P1976] >ETO69368.1 hypothetical protein, variant 5 [Phytophthora parasitica P1976])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAEAHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTIHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_024572828.1 (hypothetical protein, variant 2 [Plasmopara halstedii] >CEG36459.1 hypothetical protein, variant 2 [Plasmopara halstedii])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 98/272 (36.03%), Postives = 151/272 (55.51%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLG-LNRFESQPSFHDQVARNQWSDQ--IGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVR 302
            ++R LA+ P +G  ++A R+++WP LLG L+  ++  +   +  + +  D   I +DV RSLWHY  +   K+ +R S+RR L  +I ++++ + TL Y+QG+HDV+SV +L +    D   AV      Y       R  F  +     LL PL++AAD  +   L+A G+  +  LPW+I W++H     E  ARLFD FL   PLF LY++A ++LEA+  +   E  DF  +H  LS+L    D  +E +IARA  L    PP +L R
Sbjct:   65 EVRRLAITP-NGLISSAFRTILWPFLLGLLSMKQNVRAISGENVKTEHRDAALIEKDVERSLWHYDVLKRLKETERLSKRRALKNIILSVLNANTTLFYFQGYHDVVSVFLLTLGNSMDTMRAVQVISETYQ--REPMRSGFEQVMDTTRLLFPLLDAADELLFRHLQASGVEPFFALPWMITWFSHQLKRFEDVARLFDLFLVTHPLFSLYVSAGVLLEARETILCCE-CDFGTMHGMLSKLPLTMD--IEKVIARALVLFHQKPPEQLRR 330
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETI40631.1 (hypothetical protein F443_14036 [Phytophthora parasitica P1569] >ETK80730.1 hypothetical protein L915_13678 [Phytophthora parasitica] >ETL34146.1 hypothetical protein L916_13577 [Phytophthora parasitica] >ETM40653.1 hypothetical protein L914_13472 [Phytophthora parasitica] >ETP10433.1 hypothetical protein F441_13962 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 149.8 bits (377), Expect = 1.900e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAETHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTMHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETI40632.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK80731.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL34147.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM40654.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETP10434.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 149.8 bits (377), Expect = 1.900e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAETHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTMHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETI40633.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK80732.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL34148.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM40655.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETP10435.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 149.8 bits (377), Expect = 1.900e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAETHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTMHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
[Close]
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ETI40634.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETI40635.1 hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETI40636.1 hypothetical protein, variant 5 [Phytophthora parasitica P1569] >ETK80733.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETK80734.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETK80735.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETL34149.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL34150.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL34151.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETM40656.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM40657.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM40658.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETP10436.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP10437.1 hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >ETP10438.1 hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 149.8 bits (377), Expect = 1.900e-32
Identity = 95/273 (34.80%), Postives = 149/273 (54.58%), Query Frame = 0 
Query:   34 KLRALALAPGDGFCNNALRSVIWPKLLGLNRFES---QPSFHDQVARNQWSDQIGRDVARSLWHYH-MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRL 303
            ++R LA+ P  G  +   R   WP LLG++R        + +     ++ + Q+ +DV RSLWHY  +   K+  R S+RR L ++I  +++ +  L Y+QG+HD++SV +L +    +   AV + V+  Y  +   R  F  +     LL PL++AAD  +   L A G+  +  LPW+I W+AH     E  ARL+D FL   PLF LY++A ++LEA+ ++   E +DF  +H  LS L    D  +E +IARA  L   LPP +L +L
Sbjct:   62 EVRRLAITP-KGLVSEEFRREAWPFLLGVDRLTQNGLSTTGNSSAETHRDAAQVEKDVERSLWHYDVLQRIKESDRRSKRRALTQIILGVLNANDELFYFQGYHDIVSVFLLTLGNSKNTMQAV-QNVSETYQRE-PMRSGFEQVMETTRLLFPLLDAADELLFQHLHASGVEPFFALPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSAGVVLEAREKILRCE-RDFGTMHGMLSSLPLSMD--IEKVIARALVLFHQLPPEQLRKL 328
The following BLAST results are available for this feature:
BLAST of NO02G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_004991292.11.300e-3335.02hypothetical protein PTSG_08266 [Salpingoeca roset... [more]
XP_002906542.18.500e-3336.03conserved hypothetical protein [Phytophthora infes... [more]
ETO69363.11.100e-3234.80hypothetical protein F444_14066 [Phytophthora para... [more]
ETO69364.11.100e-3234.80hypothetical protein, variant 1 [Phytophthora para... [more]
ETO69366.11.100e-3234.80hypothetical protein, variant 3 [Phytophthora para... [more]
XP_024572828.11.100e-3236.03hypothetical protein, variant 2 [Plasmopara halste... [more]
ETI40631.11.900e-3234.80hypothetical protein F443_14036 [Phytophthora para... [more]
ETI40632.11.900e-3234.80hypothetical protein, variant 1 [Phytophthora para... [more]
ETI40633.11.900e-3234.80hypothetical protein, variant 2 [Phytophthora para... [more]
ETI40634.11.900e-3234.80hypothetical protein, variant 3 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006895NSK006895Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02510.1NO02G02510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574314gene_840Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g52gene253Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02510.1NO02G02510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02510 ID=NO02G02510|Name=NO02G02510|organism=Nannochloropsis oceanica|type=gene|length=2008bp
TGCAAGTCTGAGGTGCAACAGTCAAGTGGTCCGCCGCACTAACACAGCAC
ACACACAAGATACAGGTGTGCACTGATAGGAAAGGAGCAGCAACAATACG
AACGTCTCGTTGTCTACCTGCCCTGGAGCTGGAGTCTCGCTAGTGGCCAC
TCGTTGACTTAGCCAGCCGAGAGCCTCCCTCCCTCCCTCCCTCCCACCCC
GCTATCCGCCCACAATCCCTAGGGGCTGCCCTGGCACTCAATGTCTGAGG
ATGCCAGAAGAAACGGCCGCAGTACCTCCATGGCACAAAGAGAGAAGGCC
ATTCGAGATCTCATCGTCCAAAATCCTGTGCCTTTGGAGAAGCTTAGGGC
CTTGgtaagtcgccatcgaaatcgatttccacaagcccattggcagattc
ccaaaacccttatcttcgcttgccctacccgcgatcccgatgcatacatg
ttgccctgaagctctcctcaacgtgctggggtcctacaattattgaaacc
cctcccaccaagacccatttcgcttgcccacaacgcacgcacacgtcctc
ctaattgaaccctttccgcatctctgcccccttcgtagGCCCTGGCCCCC
GGTGATGGATTCTGTAACAATGCGCTTCGATCCGTGATATGGCCAAAGCT
ATTGGGCCTCAACCGCTTCGAATCTCAGCCCTCCTTCCATGACCAAGTGG
CGCGCAATCAATGGAGTGACCAAATCGGGCGTGACGTCGCTCGCTCGCTC
TGGCACTACCACATGCCGCATGCCAAGAAGCGGAAGCGAGGGAGTCGAAG
AAGGCTGCTAGCGAAGATGATCAACGCCTTGATGAGCAAGCATCCGACTC
TTCACTACTATCAAGGTTTTCACGACGTCCTCTCTGTCCTCGTCCTCGTC
ATGACTGAAGACGATGATCTTTGCTTCGCAGTTGCTGAGCGGGTAGCCCT
CTACTATCTAGGTGATTATACCCGCCGACCAGACTTCTCTGTGCTCACCC
CTCTATTAGAACTGCTTCTCCCCCTCGTCGAAGCTGCTGATGGCGACGTC
GGTGCTTGCCTCCGGGCGTGTGGCATCCACGCATACGTGTGCTTGCCATG
GGTCATTGCTTGGTGGGCGCATGATTGTCATAATCTCGAAATAACAGCTC
GATTGTTCGATGCCTTTCTGTCAGGCCCTCCCTTATTTCCTCTCTACCTT
GCCGCCGCCATGATCCTGGAAGCCAAAACCGAGCTTTTTGCTTTGGAGGA
CAAGGACTTCTCCGCAGTCCACTCCTTCCTCTCCCGCCTTGCCTCCCGTC
CCGACTTACCGGTGGAAACCCTCATCGCCCGTGCACATCGCTTGCTTCTC
TCCCTTCCTCCTGCCAAACTCGTTCGACTGCATGGTCACCCTTTCTTGAG
AGACCTGGCGAGGAAGAAAGAAGTGCACGCTTTGAATTTTCCTCATGTGG
AATGGTATAAAAAAGAAGCTCCCCCTGATTGGTTGCTGCGCGAAGATCGA
CGACGGGAGGAAGGACGGAGTGTCCGGTGCAAACACACGAGACAGCGACG
CCGACAGGCTTACCTAGCGGGAGTCCAGATGCCATCAGCGGCGGGTGTTG
TGGGTAACGAGAAAAAAGGGGCGTTGTGGTCGTCGGCTTCGTCGCCGCCT
TCCTCCACCTCACTCTGGGTGGCTGCGGCGGCCGTGGTGGGGGTGGCGGC
GGTCTTGTTCAAACTGGGGGAAGGGGATTTGATGGAGCTTTGGTATAACA
GAATGTCATGAGTAAATGTATCACCTGCAGGTATGTGCGTTTGGAGTGAA
ATTGTTTTCATTTTATGGAACGAGGTAGGGAGAAGATTTTGGCCAGCCAA
ATTGATAGGTTAGACGGATATCTGTTTATGTACGTATAGACAGTAGTGTG
TATATGCTTGTAAATTTATAATTTTGGCATTTGTTACCGAGGTTAAGAAC
TCAACGCATTTCGTGGGAACTGAGATGGAATGGGCCAAGAGCCAAAAAGA
CGCTGATA
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protein sequence of NO02G02510.1

>NO02G02510.1-protein ID=NO02G02510.1-protein|Name=NO02G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MSEDARRNGRSTSMAQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNA
LRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHA
KKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLC
FAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACG
IHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEA
KTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLV
RLHGHPFLRDLARKKEVHALNFPHVEWYKKEAPPDWLLREDRRREEGRSV
RCKHTRQRRRQAYLAGVQMPSAAGVVGNEKKGALWSSASSPPSSTSLWVA
AAAVVGVAAVLFKLGEGDLMELWYNRMS*
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Synonyms
Publications