NO02G02500, NO02G02500 (gene) Nannochloropsis oceanica

Overview
NameNO02G02500
Unique NameNO02G02500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1384
Alignment locationchr2:690917..692300 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:690917..692300 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038021Putative_hydro-lyase
IPR009906DUF1445
Homology
BLAST of NO02G02500 vs. NCBI_GenBank
Match: EWM30399.1 (Uncharacterized protein family UPF0317 [Nannochloropsis gaditana])

HSP 1 Score: 395.6 bits (1015), Expect = 1.300e-106
Identity = 181/270 (67.04%), Postives = 212/270 (78.52%), Query Frame = 0
Query:    1 MTTTTPSLQDKNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALT 271
            M   TP+  D   +P +LR   R G+ T  T+GCCPG+VQANLVILP EHA +FMTFC+RN K CPLLD+TDPG+PHPP WL   GAD+RTDLP YRVWQ+G LL E DD+  +WR D V F LGCSFSF+EAL++A L VRH++EGKNV MYKT IPCRPAG F+GNMVVSMRP+ P+Q+  V +VTSR KAVHG P+H GDPAAIGI DL +PDYG+AV +A  EVPVFFACGVTPQN +L  +  GI ITHAPGAMFVTDVLN+ LT
Sbjct:    1 MIMQTPNAFD---TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFLT 267          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: OJF17708.1 (hypothetical protein A6D91_03380 [Bacillaceae bacterium G1])

HSP 1 Score: 329.3 bits (843), Expect = 1.100e-86
Identity = 152/251 (60.56%), Postives = 190/251 (75.70%), Query Frame = 0
Query:   14 SPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDV 265
            +P  +R L R G++   TSG  PGY QANLV+LP+ +A+DF+ FC RN K CPLL+VTDPG+P P       GADLRTD+P YR++++G  + EV DIR+ WR D V+FL+GCSF+F++ALL   +PVRHI+ G NV MYKT IPC PAG F GNMVVSMRP  PQQ    +QVTSRF AVHGAPVH+GDP  IGI DLS+PD+G+ V V +GE+PVF+ACGVTPQ   +TS+P  ++ITHAPG MF+TDV
Sbjct:    4 TPQEIRTLIRHGQWRSPTSGLAPGYAQANLVVLPKTYAYDFLLFCQRNPKPCPLLEVTDPGDPEPKR--TAPGADLRTDVPKYRIYRNGKFVEEVYDIRSVWRDDLVSFLIGCSFTFEKALLDNDIPVRHIENGCNVPMYKTNIPCEPAGVFHGNMVVSMRPMTPQQAIRAVQVTSRFPAVHGAPVHIGDPEQIGIRDLSQPDFGDPVPVNEGEIPVFWACGVTPQLVAMTSRPE-LMITHAPGHMFITDV 251          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: WP_074502748.1 (putative hydro-lyase [Megasphaera cerevisiae] >OKY52848.1 DUF1445 domain-containing protein [Megasphaera cerevisiae])

HSP 1 Score: 324.7 bits (831), Expect = 2.700e-85
Identity = 154/264 (58.33%), Postives = 190/264 (71.97%), Query Frame = 0
Query:    8 LQDKNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALTL 272
            ++  ++ PG +R L REGKFT  TSG C GY QANL ILP+E AFDF+ F  RN K CP+LDVT+ GNP P   L   GAD+R D+P YRV++ G L  EV D++ +WRQD VAFLLGCSFSF+  +L AGL VRHI E  NV MY T IPC PAG F G MVVSMRP  P+     +QVTSR  +VHGAPVH+GDPAAIGI D+S+PD+G+   +  GE+PVF+ACGVTPQ   ++ KP   +ITHAPG MF+TD+LN  L++
Sbjct:    2 MEYSSMKPGDVRRLIREGKFTTFTSGVCNGYAQANLAILPKELAFDFLLFAQRNPKPCPVLDVTEAGNPEPR--LAAPGADIRFDIPKYRVYRKGELTDEVTDLKQYWRQDLVAFLLGCSFSFEGPMLDAGLEVRHITEDHNVPMYITDIPCTPAGVFHGPMVVSMRPMTPENAIRAVQVTSRMPSVHGAPVHIGDPAAIGIRDISKPDFGDPSTIRSGEIPVFWACGVTPQAVAMSVKPE-FMITHAPGHMFITDLLNADLSV 262          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: WP_006903185.1 (putative hydro-lyase [Thermaerobacter subterraneus] >EKP95175.1 hypothetical protein ThesuDRAFT_00912 [Thermaerobacter subterraneus DSM 13965])

HSP 1 Score: 324.3 bits (830), Expect = 3.600e-85
Identity = 153/261 (58.62%), Postives = 194/261 (74.33%), Query Frame = 0
Query:   11 KNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALTL 272
            +++S   LR + R G++T  T G  PGY QAN+VILP+++AFDF+ FC RN K CPLLDVTD G+P P   +V   ADLRTD+P YR+W++G L  EV DIR +WR D V FLLGCSF+F+ ALL+AG+PVRHI+EG NV M+ T  PC PAG F G MVVSMRP   +QV   +QVTSRF AVHGAPVH+GDP A+GI DL++PD+G+ V +  GEVPVF+ACGVTPQ   +++KP   +ITHAPG MF+TD  +E L +
Sbjct:    4 RHLSLPELREVIRRGQYTGPTPGLAPGYAQANVVILPQKYAFDFLLFCFRNPKPCPLLDVTDVGSPVPR--MVAPEADLRTDVPRYRIWENGVLKAEVTDIRDYWRDDLVGFLLGCSFTFEAALLEAGIPVRHIEEGCNVPMFVTNRPCTPAGVFHGPMVVSMRPIPQEQVVRAVQVTSRFPAVHGAPVHIGDPEALGIRDLAKPDFGDPVTIRPGEVPVFWACGVTPQAVAMSAKPE-FMITHAPGHMFITDPKDEELAV 261          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: WP_048513614.1 (putative hydro-lyase [Megasphaera cerevisiae] >KMO87115.1 hypothetical protein AB840_04340 [Megasphaera cerevisiae DSM 20462])

HSP 1 Score: 323.9 bits (829), Expect = 4.700e-85
Identity = 153/264 (57.95%), Postives = 190/264 (71.97%), Query Frame = 0
Query:    8 LQDKNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALTL 272
            ++  ++ PG +R L REGKFT  TSG C GY QANL ILP+E AFDF+ F  RN K CP+LDVT+ GNP P   L   GAD+R D+P YR+++ G L  EV D++ +WRQD VAFLLGCSFSF+  +L AGL VRHI E  NV MY T IPC PAG F G MVVSMRP  P+     +QVTSR  +VHGAPVH+GDPAAIGI D+S+PD+G+   +  GE+PVF+ACGVTPQ   ++ KP   +ITHAPG MF+TD+LN  L++
Sbjct:    2 MEYSSMKPGDVRRLIREGKFTTFTSGVCNGYAQANLAILPKELAFDFLLFAQRNPKPCPVLDVTEAGNPEPR--LAAPGADIRFDIPKYRIYRKGELTDEVTDLKQYWRQDLVAFLLGCSFSFEGPMLDAGLEVRHITEDHNVPMYITDIPCTPAGVFHGPMVVSMRPMTPENAIRAVQVTSRMPSVHGAPVHIGDPAAIGIRDISKPDFGDPSTIRPGEIPVFWACGVTPQAVAMSVKPE-FMITHAPGHMFITDLLNADLSV 262          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: SJZ45783.1 (Uncharacterized protein YcsI, UPF0317 family [Megasphaera cerevisiae DSM 20462])

HSP 1 Score: 323.9 bits (829), Expect = 4.700e-85
Identity = 153/264 (57.95%), Postives = 190/264 (71.97%), Query Frame = 0
Query:    8 LQDKNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALTL 272
            ++  ++ PG +R L REGKFT  TSG C GY QANL ILP+E AFDF+ F  RN K CP+LDVT+ GNP P   L   GAD+R D+P YR+++ G L  EV D++ +WRQD VAFLLGCSFSF+  +L AGL VRHI E  NV MY T IPC PAG F G MVVSMRP  P+     +QVTSR  +VHGAPVH+GDPAAIGI D+S+PD+G+   +  GE+PVF+ACGVTPQ   ++ KP   +ITHAPG MF+TD+LN  L++
Sbjct:    1 MEYSSMKPGDVRRLIREGKFTTFTSGVCNGYAQANLAILPKELAFDFLLFAQRNPKPCPVLDVTEAGNPEPR--LAAPGADIRFDIPKYRIYRKGELTDEVTDLKQYWRQDLVAFLLGCSFSFEGPMLDAGLEVRHITEDHNVPMYITDIPCTPAGVFHGPMVVSMRPMTPENAIRAVQVTSRMPSVHGAPVHIGDPAAIGIRDISKPDFGDPSTIRPGEIPVFWACGVTPQAVAMSVKPE-FMITHAPGHMFITDLLNADLSV 261          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: XP_009822519.1 (hypothetical protein H257_01155 [Aphanomyces astaci] >ETV87656.1 hypothetical protein H257_01155 [Aphanomyces astaci])

HSP 1 Score: 322.4 bits (825), Expect = 1.400e-84
Identity = 150/259 (57.92%), Postives = 188/259 (72.59%), Query Frame = 0
Query:   11 KNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEAL 270
            K+++P   RL  R+G F  N++G CPG+ QANLVILP+EHAFDF+ FC RN K CPLL+V+DPG      +     +D+RTDLP YRV++ G L  EV DI+ +WR D V FLLGCSFSF++AL  AGL +RH  EGKNV MY+T +PC PAG F GN+VVSMRPF P+       +T+R+  VHG+PVHVGDP AIGIAD+S+P YG+AV +  GE+PVF+ACGVTPQN +L SKP    ITHAPG M +TD  N+ L
Sbjct:    6 KSLTPEQFRLRCRDGSFQSNSAGYCPGFAQANLVILPKEHAFDFLLFCQRNPKPCPLLEVSDPGCVDMRRF--APNSDIRTDLPKYRVYKHGVLTEEVIDIKPYWRDDLVTFLLGCSFSFEDALQNAGLSIRHQDEGKNVPMYQTNLPCDPAGVFSGNLVVSMRPFSPKDAILASVITARYPNVHGSPVHVGDPQAIGIADISQPSYGDAVTIQPGEIPVFWACGVTPQNVLLASKP-AFAITHAPGHMLITDRRNDTL 261          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: WP_078665941.1 (MULTISPECIES: putative hydro-lyase [Carboxydocella] >GAW31808.1 DUF1445 domain-containing protein [Carboxydocella sp. JDF658] >GAW27613.1 DUF1445 domain-containing protein [Carboxydocella sp. ULO1] >SKA10155.1 Uncharacterized protein YcsI, UPF0317 family [Carboxydocella sporoproducens DSM 16521] >AVX21752.1 Uncharacterized protein YcsI, UPF0317 family [Carboxydocella thermautotrophica])

HSP 1 Score: 322.0 bits (824), Expect = 1.800e-84
Identity = 151/257 (58.75%), Postives = 189/257 (73.54%), Query Frame = 0
Query:   15 PGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALTL 272
            P  +R   R+G+    T+G C GY QANL +LP++ AF+F+ FC RN K CP+LDVT+ G+  P   L   GADLRTD+P YR+++ G L+ E  DI  +WR+D VAFLLGCSF+F+  LLQ G+PVRHI+EG+NV MY T IPC+PAGRF G MVVSMRP   QQV   +Q+TSR+ AVHGAPVH+GDP  IGI DL +PD+G+ V +  GEVPVF+ACGVTPQ   + SKP   +ITHAPG MF+TDVLNE LT+
Sbjct:    9 PEEVRGAIRKGEINRPTAGMCAGYAQANLAVLPKDLAFEFLLFCQRNPKPCPVLDVTEVGSFEPV--LTAPGADLRTDIPKYRIYKYGQLVDETSDILNYWREDLVAFLLGCSFTFESGLLQGGIPVRHIEEGRNVPMYITNIPCKPAGRFSGPMVVSMRPIPYQQVVKAVQITSRYPAVHGAPVHIGDPVLIGIKDLDKPDFGDPVTIKPGEVPVFWACGVTPQAVAMQSKP-PFMITHAPGHMFITDVLNEDLTV 262          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: OGB92353.1 (hypothetical protein A3H39_20005 [candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22] >OGC00817.1 hypothetical protein A3G35_14915 [candidate division NC10 bacterium RIFCSPLOWO2_12_FULL_66_18])

HSP 1 Score: 319.7 bits (818), Expect = 8.800e-84
Identity = 149/261 (57.09%), Postives = 192/261 (73.56%), Query Frame = 0
Query:   11 KNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEALTL 272
            K   P  +R + R+G++   T+G  PGYVQANLV+LPRE A+DF+ F  RN K CP+L+VTD G+P P   L   GADLRTDLP YR+++DG  + EV D+   W  D VAFLLGCSF+F+  LLQAG+PVRHI+EGKNVSM+ T+IPC PAG F G +VV+MRP     V+  +Q++ RF AVHGAPVHVGDP A+GI DLS+PD+G+ V +  GE PVF+ACGVTPQ   + +KP  ++I+HAPG MFVTD+ +EAL +
Sbjct:    9 KGAPPLEVRTMIRQGRWRKPTAGLAPGYVQANLVVLPRELAYDFLLFAQRNPKPCPILEVTDVGSPEP--MLTAPGADLRTDLPKYRIYRDGKFVQEVTDLLGVWTSDLVAFLLGCSFTFETGLLQAGIPVRHIEEGKNVSMFITSIPCMPAGAFSGPLVVTMRPIPASLVARAVQISGRFPAVHGAPVHVGDPGALGIRDLSKPDFGDPVTIRPGEFPVFWACGVTPQAVAMQAKP-PLMISHAPGHMFVTDLRDEALAV 266          
BLAST of NO02G02500 vs. NCBI_GenBank
Match: WP_009711055.1 (MULTISPECIES: putative hydro-lyase [Thermoactinomycetaceae] >EGK09137.1 protein of hypothetical function DUF1445 [Desmospora sp. 8437] >SIT04826.1 Uncharacterized protein YcsI, UPF0317 family [Kroppenstedtia eburnea])

HSP 1 Score: 318.9 bits (816), Expect = 1.500e-83
Identity = 148/252 (58.73%), Postives = 187/252 (74.21%), Query Frame = 0
Query:   18 LRLLAREGKFTCNTSGCCPGYVQANLVILPREHAFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQDGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNVSMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVHVGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGIVITHAPGAMFVTDVLNEAL 270
            +R   R G +   T+G  PG+VQANLVILP+  A DF+ FC RN K CPLL+VTDPG+P P       GADLRTDLP YRVW+ G L+ E  +IR  WR+D+VAFL+GCSFSF+  LL++G+PVRHI+EG+NV MY+T+IPC PAG F GN+VVSMRP  P++    +++TSR+  VHGAPVH+GDPA IGI DL+RPDYG+AV V  GE+PVF+ACGVTPQ   + S+P   +ITHAPG M +TD+    L
Sbjct:    9 VRNAIRTGGWEGPTAGLAPGFVQANLVILPQSQAADFLLFCTRNPKPCPLLEVTDPGDPVPRK--TAPGADLRTDLPRYRVWRHGELVEERREIRDLWREDAVAFLVGCSFSFESILLRSGVPVRHIEEGRNVPMYRTSIPCEPAGSFHGNLVVSMRPLPPREAIRAVEITSRYPQVHGAPVHLGDPAGIGIGDLNRPDYGDAVTVRPGELPVFWACGVTPQAVAVASRPEW-MITHAPGHMLITDMKESEL 257          
The following BLAST results are available for this feature:
BLAST of NO02G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30399.11.300e-10667.04Uncharacterized protein family UPF0317 [Nannochlor... [more]
OJF17708.11.100e-8660.56hypothetical protein A6D91_03380 [Bacillaceae bact... [more]
WP_074502748.12.700e-8558.33putative hydro-lyase [Megasphaera cerevisiae] >OKY... [more]
WP_006903185.13.600e-8558.62putative hydro-lyase [Thermaerobacter subterraneus... [more]
WP_048513614.14.700e-8557.95putative hydro-lyase [Megasphaera cerevisiae] >KMO... [more]
SJZ45783.14.700e-8557.95Uncharacterized protein YcsI, UPF0317 family [Mega... [more]
XP_009822519.11.400e-8457.92hypothetical protein H257_01155 [Aphanomyces astac... [more]
WP_078665941.11.800e-8458.75MULTISPECIES: putative hydro-lyase [Carboxydocella... [more]
OGB92353.18.800e-8457.09hypothetical protein A3H39_20005 [candidate divisi... [more]
WP_009711055.11.500e-8358.73MULTISPECIES: putative hydro-lyase [Thermoactinomy... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006894NSK006894Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02500.1NO02G02500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574311gene_839Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g53gene252Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02500.1NO02G02500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02500 ID=NO02G02500|Name=NO02G02500|organism=Nannochloropsis oceanica|type=gene|length=1384bp
TCATGCTTGGTTCTGTTGAGGGCTATATGTATGTGTTGTGGGGGGAGTTA
GCGCGCATGTGTGGGGACACAGGAGGCAGGAAAGTAGAAAGCCGTTGAAA
ACTTGCGTTAACGGAGAATCAAAAATCGCTTCCATCATGACCCCCGATGA
AGACGAATCACAGCCCTTGAAAGCACGTGATTCTGCCCAGAAAACCTTGA
AAGAGACTGAACCTGCCCCCGGAGGTTTTCCCCAAGGCTTCTGCTGTCCT
CCATGCCTCAAGACTTATCGCGCAAAGCCTCCCCTATGATTTCCTGATCC
ACAACAGCAGGACCCCTCCATCGCACCACTCTCAGCGTTTTCGTATGACT
ACCACCACACCATCACTACAAGACAAAAACATCAGTCCTGGATCTCTCCG
CCTGTTGGCCCGAGAAGGGAAATTCACATGCAACACTTCTGGATGCTGCC
CCGGCTACGTGCAGGCTAACCTTGTTATTTTGCCGCGCGAGCACGCCTTC
GACTTCATGACCTTTTGCGTGCGCAACTTTAAAGCCTGTCCCCTCCTAGA
TGTTACGGATCCAGGTAATCCCCACCCGCCCGCATGGCTCGTCAAGGGTG
GTGCCGATTTGCGGACAGACTTGCCAAATTATCGAGgtacgtgtaaggtt
taaagcttcagtgggagtgaagaaatttaagaaagagaattcgacccatt
ttatcgaggtgcactctcaaattcctcggcgatacagccacgaaacatga
attgaaggagtaagagcgtcattcataactcagccatatatcgatcattt
ctacccttcgcaaccacagTGTGGCAAGACGGCACACTCCTCCATGAGGT
CGATGACATTCGAGCCTTTTGGCGACAGGACTCTGTAGCCTTCCTTCTTG
GTTGCTCATTTTCCTTTGATGAAGCCCTCCTGCAAGCCGGCCTGCCAGTA
CGCCACATCCAAGAAGGCAAAAATGTTTCCATGTACAAAACTACCATCCC
GTGCCGTCCCGCAGGGCGCTTCAAAGGGAATATGGTCGTGTCCATGCGTC
CGTTTCATCCCCAGCAAGTCAGCCACGTTATCCAAGTCACTTCCCGATTC
AAGGCCGTCCATGGTGCACCAGTTCACGTGGGTGATCCTGCCGCTATCGG
CATCGCTGACTTAAGCAGACCAGATTATGGAGAGGCTGTCTTGGTAGCCA
AGGGGGAGGTGCCTGTGTTTTTTGCATGTGGTGTCACCCCACAAAATGCC
GTATTGACAAGTAAACCGAGAGGGATTGTGATTACACATGCCCCAGGTGC
CATGTTCGTGACAGATGTGTTGAATGAGGCCTTGACGTTGAGTTAAGCTG
GACTGCAAAAGAAAGAAGAAAACGAAAAGCACGG
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protein sequence of NO02G02500.1

>NO02G02500.1-protein ID=NO02G02500.1-protein|Name=NO02G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bp
MTTTTPSLQDKNISPGSLRLLAREGKFTCNTSGCCPGYVQANLVILPREH
AFDFMTFCVRNFKACPLLDVTDPGNPHPPAWLVKGGADLRTDLPNYRVWQ
DGTLLHEVDDIRAFWRQDSVAFLLGCSFSFDEALLQAGLPVRHIQEGKNV
SMYKTTIPCRPAGRFKGNMVVSMRPFHPQQVSHVIQVTSRFKAVHGAPVH
VGDPAAIGIADLSRPDYGEAVLVAKGEVPVFFACGVTPQNAVLTSKPRGI
VITHAPGAMFVTDVLNEALTLS*
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