NO02G02460, NO02G02460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02460 vs. NCBI_GenBank
Match: EWM30409.1 (pyrroline-5-carboxylate reductase [Nannochloropsis gaditana]) HSP 1 Score: 346.7 bits (888), Expect = 6.300e-92 Identity = 182/255 (71.37%), Postives = 214/255 (83.92%), Query Frame = 0 Query: 1 MLSTRLLAITTAAVRRSALLQRHNPSTLITPLAGSTVPIRYMHRSQPAANHGDSLTDPDADAEGFDFHRIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDA 256 ML TRL I A RR+ L+QRH PS T +TV R++HRSQ A +H DS DP A+AEGFDF+RIGLVGGGKMSEAIIEGF+ E+LI+PE+ISV+DV+R RL++L K FGV SSS+AA CK++DLVIIAVKPQNL+ KLW QL+ +L P+SV+LSIVAG+ MSNF E+TGN R+VRTMPNTPATIQQGMTVWAC+D VS+SQRNSVAKFLSSLGEQHFV +E YLDMATAVSGSGPGYV+LILEAL+DA Sbjct: 1 MLPTRLAGI---AARRAFLMQRHIPSNANTTAMSATV--RWIHRSQAALSHDDSKPDPVANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDA 250
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB70605.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium Io17-Chloro-G6]) HSP 1 Score: 171.8 bits (434), Expect = 2.800e-39 Identity = 87/188 (46.28%), Postives = 120/188 (63.83%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGGKM+EAI+ G L +L PE ISV + R E+L +FGV T + + + A+LV++AVKPQ+L + QLK HL Q LSIVAG M S+ G+ ++R MPNTPA I GMT+W CS+ V QR L ++G++ +V +E Y+DMATA+S SGP YV L +EAL+DAG Sbjct: 2 KVTFIGGGKMAEAILHGVLSGKLAAPEDISVGEPVAERREYLSSQFGVATDADNLKSAQQANLVVLAVKPQDLG-PVMGQLKGHLDSQQAALSIVAGAKMETLSDGLGHKSVIRVMPNTPAQIGAGMTLWTCSEGVDAPQREMAKSVLGTIGQEIYVSDEKYMDMATALSASGPAYVFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PCJ73916.1 (pyrroline-5-carboxylate reductase [Dehalococcoidia bacterium]) HSP 1 Score: 170.6 bits (431), Expect = 6.200e-39 Identity = 88/188 (46.81%), Postives = 121/188 (64.36%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGGKM+EAI+ G L +L P+ ISV + R E+L +FGV T + + ADLV+IAVKPQ+L + QLK HL Q LSIVAG M ++ + +VR MPNTPA I +GM++W CSD V S+R V L ++G++ +V +E Y+DMATA+S SGP YV L +EAL+DAG Sbjct: 2 KVAFIGGGKMAEAILHGVLSGKLAGPKDISVGEPVAERREYLSSQFGVSTDADNLKSANQADLVVIAVKPQDLG-PVMGQLKGHLGSQQAALSIVAGAKMDTLTKGLDHQSVVRVMPNTPAQIGEGMSLWTCSDGVDESRREMVKAVLGTIGQEIYVADEKYMDMATALSASGPAYVFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB75564.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium MP-SAtl-SRR3965592-G1] >PKB83016.1 pyrroline-5-carboxylate reductase [SAR202 cluster bacterium MP-SInd-SRR3963457-G1]) HSP 1 Score: 170.6 bits (431), Expect = 6.200e-39 Identity = 88/188 (46.81%), Postives = 121/188 (64.36%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGGKM+EAI+ G L +L P+ ISV + R E+L +FGV T + + ADLV+IAVKPQ+L + QLK HL Q LSIVAG M ++ + +VR MPNTPA I +GM++W CSD V S+R V L ++G++ +V +E Y+DMATA+S SGP YV L +EAL+DAG Sbjct: 2 KVAFIGGGKMAEAILHGVLSGKLAGPKDISVGEPVAERREYLSSQFGVSTDADNLKSANQADLVVIAVKPQDLG-PVMGQLKGHLGSQQAALSIVAGAKMDTLTKGLDHQSVVRVMPNTPAQIGEGMSLWTCSDGVDESRREMVKAVLGTIGQEIYVADEKYMDMATALSASGPAYVFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB83660.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium MP-NPac-SRR3961935-G1]) HSP 1 Score: 169.1 bits (427), Expect = 1.800e-38 Identity = 87/188 (46.28%), Postives = 121/188 (64.36%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGGKM+EAI+ G L +L P+ ISV + R E+L +FGV T + + A+LV+IAVKPQ+L + QLK HL Q LSIVAG M ++ + +VR MPNTPA I +GM++W CSD V S+R V L ++G++ +V +E Y+DMATA+S SGP YV L +EAL+DAG Sbjct: 2 KVAFIGGGKMAEAILHGVLSGKLAGPKDISVGEPVAERREYLSSQFGVSTDADNLKSANQAELVVIAVKPQDLG-PVMGQLKGHLGSQQAALSIVAGAKMDTLTKGLDHQSVVRVMPNTPAQIGEGMSLWTCSDGVDESRREMVKAVLGTIGQEIYVADEKYMDMATALSASGPAYVFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB74700.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium Io17-Chloro-G8]) HSP 1 Score: 167.9 bits (424), Expect = 4.000e-38 Identity = 86/188 (45.74%), Postives = 120/188 (63.83%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGGKM+EAI+ G L +L P+ ISV + R E+L +FGV + + ADLV+ A+KPQ+L + QLK HL Q LSIVAG M ++ G+ +VR MPNTPA I +GM++W CSD V S+R V L ++G++ +V +E Y+DMATA+S SGP YV L +EAL+DAG Sbjct: 2 KVAFIGGGKMAEAILHGVLSGKLADPKDISVGEPVVERREYLSSQFGVSADVDNLKSTQQADLVVFAIKPQDLG-PVMGQLKGHLDSQQAALSIVAGAKMDTLTKGLGHQSVVRVMPNTPAQIGEGMSLWTCSDGVDDSRREMVKAVLGTIGQEIYVSDEKYMDMATALSASGPAYVFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: OGN99847.1 (pyrroline-5-carboxylate reductase [Chloroflexi bacterium RBG_13_52_14]) HSP 1 Score: 166.8 bits (421), Expect = 9.000e-38 Identity = 85/188 (45.21%), Postives = 126/188 (67.02%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +GGG M EAI++ L +++ KP I+ DV++ R + LKK +GV ++ K A+++++AVKPQ L K+ ++K L+PQ ++LSIVAG T+ E G+ +VR MPN PA I +GMTVW + +V+ Q+ L++LG++ +V +E Y+DMATAVSGSGP YV LI+EALVDAG Sbjct: 2 KISFIGGGMMGEAIVKSLLAKKVAKPADITASDVSQIRRDILKKNYGVKAVANNKEAVKGAEVIVLAVKPQELG-KVLGEMK-GLTPQQLVLSIVAGATLETLQEGLGHASLVRAMPNMPAQIGEGMTVWTATAEVNQKQKEMAQSILAALGKEIYVSSEKYIDMATAVSGSGPAYVFLIIEALVDAG 187
BLAST of NO02G02460 vs. NCBI_GenBank
Match: OQY29666.1 (pyrroline-5-carboxylate reductase [Anaerolineaceae bacterium 4572_5.1]) HSP 1 Score: 166.4 bits (420), Expect = 1.200e-37 Identity = 85/188 (45.21%), Postives = 124/188 (65.96%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +G G M+ AII G L+E+L PE + D R E L++++G+ + A NAD+V+++VKPQ L L +L+ + +++LSI+AG T+ S G+ ++VRTMPNTPA I +G+TVW SD VS SQ+ K LS+LGE FV++E YLDMATA+SG+GP YV + +EA++DAG Sbjct: 5 KIAFIGSGAMAGAIIVGLLREKLATPENLFASDPREDRGEELREKYGIQPFTDNTAAVANADVVVLSVKPQRLRGVL-EELQGKIPSHALVLSIIAGATIEKISTGLGHGKVVRTMPNTPARIGEGITVWVASDAVSTSQKEQAQKILSALGEDVFVEDEYYLDMATALSGTGPAYVYMFMEAMIDAG 191
BLAST of NO02G02460 vs. NCBI_GenBank
Match: XP_002184708.1 (pyrroline-5-carboxylate reductase, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43767.1 pyrroline-5-carboxylate reductase, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 165.6 bits (418), Expect = 2.000e-37 Identity = 79/189 (41.80%), Postives = 132/189 (69.84%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQL-KEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +G GKM++A+IE +K+ + E SVFDV+ +E + ++ GV T+ S+ ADLVI AVKPQNL+ + +L K + ++LLS++AG + S F++ G ++VR+MPNTPATI +GMTVW+C+ ++++ +R + + LSS G+ +V +E ++DMAT++SGSGP Y+ +++E+++DAG Sbjct: 1 KIACIGTGKMAQAVIEPMIKKGVQSAENFSVFDVSPKTMEQVHQKLGVKTADSIPELVSGADLVICAVKPQNLTPAFFQELRKSDIRQNAILLSVIAGKSSSVFTQG-GFEKVVRSMPNTPATIGEGMTVWSCTPNLTVDERKKIRQVLSSCGKSMYVDDESFIDMATSISGSGPAYIFMLMESMIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: OGO59295.1 (pyrroline-5-carboxylate reductase [Chloroflexi bacterium RBG_19FT_COMBO_47_15]) HSP 1 Score: 165.6 bits (418), Expect = 2.000e-37 Identity = 86/188 (45.74%), Postives = 128/188 (68.09%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +GGG M EAII+ + + + KP ++V DV++AR + LKK++GV S K A++V++AVKPQ L K+ +LK+ LS Q ++LSIVAG T+ + + ++R+VR MPN A I +GMTVW +D VS Q++ L+++G++ +V E Y+DMATA+SGSGP YV L++EALVDAG Sbjct: 2 KISFIGGGVMGEAIIKSLMAKGVAKPGDVAVSDVSKARKDTLKKKYGVKVVSDNKEVVKGAEVVVLAVKPQELG-KVMGELKKLLS-QQLVLSIVAGATLESLQQGLSHSRLVRAMPNMAAQIGEGMTVWTATDGVSQKQKDMAQSILAAMGKEIYVSGEKYIDMATALSGSGPAYVFLVIEALVDAG 187 The following BLAST results are available for this feature:
BLAST of NO02G02460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02460 ID=NO02G02460|Name=NO02G02460|organism=Nannochloropsis oceanica|type=gene|length=1993bpback to top protein sequence of NO02G02460.1 >NO02G02460.1-protein ID=NO02G02460.1-protein|Name=NO02G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top protein sequence of NO02G02460.2 >NO02G02460.2-protein ID=NO02G02460.2-protein|Name=NO02G02460.2|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
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