NO02G02200, NO02G02200 (gene) Nannochloropsis oceanica

Overview
NameNO02G02200
Unique NameNO02G02200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2358
Alignment locationchr2:616958..619315 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:616958..619315 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02200.1NO02G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|142523gene_806Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02200.1NO02G02200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02200 ID=NO02G02200|Name=NO02G02200|organism=Nannochloropsis oceanica|type=gene|length=2358bp
ATGAGTCGGCTCGCTGCGAAGACACGGAGGAAAGCTACCATTACGTTTGC
CCATCGGGGTTTGAAGGAGAGCAAGGGACAGGTCAAGGCCGCTGCACCGG
AGCCATTTCCACGCAGTCCTGCTGTGGTATCGTGGgtagagatgcctgta
aacatagctttatatgcacccattcaacaccgattgggaagaacgacaat
tgcaaaggccagtgtgtggagaacaccaactgtacccttatctcccagGA
GCTTGATTTGTATGGCTACGTTTGCCCAGACGGGTACTTCGGGACTGCGC
GGCATTGTCCCCGGGGTCGTGAGCCTCCGCCTACTTTCTTTGACGAGGCT
GGAAATTTGTTGGGGAAGATGCAGGCGGATGAATATTGTGGGTGTCAACC
CAAGgtaagcagaagaggagggaggatgtcactgccctgcttgcttgatt
caatcctgtaattttttcatgtaaggcagttttcttgtattatgacgcgt
cgtctccttgaatttcacgacacttactgcattcctccctccctcccctt
tacttcctcccttgccctcctgacagGTCACGGATTGGTGCATGGGCAAA
GATTgtggggaacacgccgtgtgtcaaaatgcagccaactcccaccgctg
cgtgtgcgatgcaggctacgtagaagaacagggttgatgtgtggataagg
cgggtgtgccgttgttgttggaagGCCCGGAGGTAGTGACGGTGGTGCAG
GGGGACGCTTACGAAGATCGCTTAGTCCGCATCATGGACACTAATGAGAT
GTTAGCCGAGCCAAGgtacgtgaggtgtaaaaaaaaggcgaaagaattgt
taatgcttggaaatcccattccttgcagtagacccagtagctgcagcagt
tgcagcggcaagaacatcattatcacctttcacccccctccctcccaccc
tccctccctccctccctcctccctcctcctgccgttagGTACATCTCTAT
CTCCTACGACTCCCCCAGCTTGAATGCCGATACCCTCGACGATGTTGgta
cctatttcattagctacaccgtcaaggccccctggaccagcacccccact
gtgaccattcgccgaacgattgtcgtgaaagatttgaacgagtgcagcct
ccgacccaccgatgcgaaatggaacaaatggcggccacgctgtcataagt
gggcgaaatgctccaacatcaacggggatatacgtgctcgtgccgccctg
gcaccattggagatggtgcagAAGGCAACAGCACGTGTCTCAAGGAGGAA
GGGAACTTTACCCCGAGGAATGCGAAGAACGGCACTGGCTGCGTGGATGT
GAAAGCACCTGTGTTGGTGGTGCCTTCGTTTGAGAAGACGTTTCAAACAT
GTAAATGTGAGGGGCTGGGAGGACCGGGCACGCCAGCGCCTCCTGGATGT
GCTGCTCGTGGCTATGGCAAGGAGCTCAGGGAGTTGACCGTGGGGGGAGG
GGGGGAGGGAAGGGGTTTGTTGTGTACAGACGGGTGGCCTTGTTTTGAGG
CCTATGATGACTTGCCGGACGGCACGCGGGTGAATTTGACTCGGCGAGTG
GTAATGGGACCAGACGTAGAAGAAGATGTAGAGAACCACACGGCGGTGAA
GGCTGGGAAGAAAACGAAGTTTTTTGTGTTGCCTTTGAGTGTGGAGGATG
ATGCCGGTAACAAGGCACGCTCACAGTTGCGGTTTTCGGTGGAAGAGGTG
TCCTTGTTCTCGCACACgtctctgctgggaaggggaggaaagaataacaa
gccgaactggtctcgcgcccccccttcaactcctcctacacctgttgctc
cttctgttttgaaagtagCGAAAATGAGGAGGAGGGGGAGGACAACGACA
GTGAGGAGGAGTTGCGGCAGGATGAGAAGAGGGAGAAAAGTAAGCTTGCG
AAGCGCGACGTTGGTGCTGGTACGACTGCTGCCGCTGCTGCTGCCGCCGC
TGTGTCAAGTCCTCCAGCTCATCGACCAAGCTGTGATAGCGACGCCGAGC
CTACGGGAGAAACAGAGGTCAATAAGGAGGAGGATTTTGATGGAGAAGCT
GTGTTGTTGGTCATCCTCCTCATTTTGTGCAGTCTTGGGGCTTGGATTTA
CAGCAGCAGCAACAACTGCGGTGATGTGCTCGCTCCGGATGAAATAAGCG
TGGGAGGGGGCGAAACAAGGGATGTGGGGGACGATGCGTTTGTGTACCAG
GAGGGTCTTACTCCAAATAGTCGACGAAATAGATTTAGTTCGCCAGGAGT
GAGGTTAGGCGTATCCCCTTATGCATCACCGCAATCATACCGTGAGGGAG
AGAGGTAG
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protein sequence of NO02G02200.1

>NO02G02200.1-protein ID=NO02G02200.1-protein|Name=NO02G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MSRLAAKTRRKATITFAHRGLKESKGQVKAAAPEPFPRSPAVVSWELDLY
GYVCPDGYFGTARHCPRGREPPPTFFDEAGNLLGKMQADEYCGCQPKVTD
WCMGKDCPEVVTVVQGDAYEDRLVRIMDTNEMLAEPRYISISYDSPSLNA
DTLDDVEGNSTCLKEEGNFTPRNAKNGTGCVDVKAPVLVVPSFEKTFQTC
KCEGLGGPGTPAPPGCAARGYGKELRELTVGGGGEGRGLLCTDGWPCFEA
YDDLPDGTRVNLTRRVVMGPDVEEDVENHTAVKAGKKTKFFVLPLSVEDD
AGNKARSQLRFSVEEVSLFSHTENEEEGEDNDSEEELRQDEKREKSKLAK
RDVGAGTTAAAAAAAAVSSPPAHRPSCDSDAEPTGETEVNKEEDFDGEAV
LLVILLILCSLGAWIYSSSNNCGDVLAPDEISVGGGETRDVGDDAFVYQE
GLTPNSRRNRFSSPGVRLGVSPYASPQSYREGER*
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Synonyms
Publications