NO02G02200.1, NO02G02200.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G02200.1
Unique NameNO02G02200.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1455
Alignment locationchr2:616958..619315 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:616958..619315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G02200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02200NO02G02200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G02200.1NO02G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G02200.1.cds1NO02G02200.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02200.1.cds2NO02G02200.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02200.1.cds3NO02G02200.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02200.1.cds4NO02G02200.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02200.1.cds5NO02G02200.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02200.1.cds6NO02G02200.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02200.1.cds7NO02G02200.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G02200.1 ID=NO02G02200.1|Name=NO02G02200.1|organism=Nannochloropsis oceanica|type=mRNA|length=1455bp
ATGAGTCGGCTCGCTGCGAAGACACGGAGGAAAGCTACCATTACGTTTGC
CCATCGGGGTTTGAAGGAGAGCAAGGGACAGGTCAAGGCCGCTGCACCGG
AGCCATTTCCACGCAGTCCTGCTGTGGTATCGTGGGAGCTTGATTTGTAT
GGCTACGTTTGCCCAGACGGGTACTTCGGGACTGCGCGGCATTGTCCCCG
GGGTCGTGAGCCTCCGCCTACTTTCTTTGACGAGGCTGGAAATTTGTTGG
GGAAGATGCAGGCGGATGAATATTGTGGGTGTCAACCCAAGGTCACGGAT
TGGTGCATGGGCAAAGATTGCCCGGAGGTAGTGACGGTGGTGCAGGGGGA
CGCTTACGAAGATCGCTTAGTCCGCATCATGGACACTAATGAGATGTTAG
CCGAGCCAAGGTACATCTCTATCTCCTACGACTCCCCCAGCTTGAATGCC
GATACCCTCGACGATGTTGAAGGCAACAGCACGTGTCTCAAGGAGGAAGG
GAACTTTACCCCGAGGAATGCGAAGAACGGCACTGGCTGCGTGGATGTGA
AAGCACCTGTGTTGGTGGTGCCTTCGTTTGAGAAGACGTTTCAAACATGT
AAATGTGAGGGGCTGGGAGGACCGGGCACGCCAGCGCCTCCTGGATGTGC
TGCTCGTGGCTATGGCAAGGAGCTCAGGGAGTTGACCGTGGGGGGAGGGG
GGGAGGGAAGGGGTTTGTTGTGTACAGACGGGTGGCCTTGTTTTGAGGCC
TATGATGACTTGCCGGACGGCACGCGGGTGAATTTGACTCGGCGAGTGGT
AATGGGACCAGACGTAGAAGAAGATGTAGAGAACCACACGGCGGTGAAGG
CTGGGAAGAAAACGAAGTTTTTTGTGTTGCCTTTGAGTGTGGAGGATGAT
GCCGGTAACAAGGCACGCTCACAGTTGCGGTTTTCGGTGGAAGAGGTGTC
CTTGTTCTCGCACACCGAAAATGAGGAGGAGGGGGAGGACAACGACAGTG
AGGAGGAGTTGCGGCAGGATGAGAAGAGGGAGAAAAGTAAGCTTGCGAAG
CGCGACGTTGGTGCTGGTACGACTGCTGCCGCTGCTGCTGCCGCCGCTGT
GTCAAGTCCTCCAGCTCATCGACCAAGCTGTGATAGCGACGCCGAGCCTA
CGGGAGAAACAGAGGTCAATAAGGAGGAGGATTTTGATGGAGAAGCTGTG
TTGTTGGTCATCCTCCTCATTTTGTGCAGTCTTGGGGCTTGGATTTACAG
CAGCAGCAACAACTGCGGTGATGTGCTCGCTCCGGATGAAATAAGCGTGG
GAGGGGGCGAAACAAGGGATGTGGGGGACGATGCGTTTGTGTACCAGGAG
GGTCTTACTCCAAATAGTCGACGAAATAGATTTAGTTCGCCAGGAGTGAG
GTTAGGCGTATCCCCTTATGCATCACCGCAATCATACCGTGAGGGAGAGA
GGTAG
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protein sequence of NO02G02200.1

>NO02G02200.1-protein ID=NO02G02200.1-protein|Name=NO02G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MSRLAAKTRRKATITFAHRGLKESKGQVKAAAPEPFPRSPAVVSWELDLY
GYVCPDGYFGTARHCPRGREPPPTFFDEAGNLLGKMQADEYCGCQPKVTD
WCMGKDCPEVVTVVQGDAYEDRLVRIMDTNEMLAEPRYISISYDSPSLNA
DTLDDVEGNSTCLKEEGNFTPRNAKNGTGCVDVKAPVLVVPSFEKTFQTC
KCEGLGGPGTPAPPGCAARGYGKELRELTVGGGGEGRGLLCTDGWPCFEA
YDDLPDGTRVNLTRRVVMGPDVEEDVENHTAVKAGKKTKFFVLPLSVEDD
AGNKARSQLRFSVEEVSLFSHTENEEEGEDNDSEEELRQDEKREKSKLAK
RDVGAGTTAAAAAAAAVSSPPAHRPSCDSDAEPTGETEVNKEEDFDGEAV
LLVILLILCSLGAWIYSSSNNCGDVLAPDEISVGGGETRDVGDDAFVYQE
GLTPNSRRNRFSSPGVRLGVSPYASPQSYREGER*
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mRNA from alignment at chr2:616958..619315-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G02200.1 ID=NO02G02200.1|Name=NO02G02200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2358bp|location=Sequence derived from alignment at chr2:616958..619315- (Nannochloropsis oceanica)
ATGAGTCGGCTCGCTGCGAAGACACGGAGGAAAGCTACCATTACGTTTGC CCATCGGGGTTTGAAGGAGAGCAAGGGACAGGTCAAGGCCGCTGCACCGG AGCCATTTCCACGCAGTCCTGCTGTGGTATCGTGGGTAGAGATGCCTGTA AACATAGCTTTATATGCACCCATTCAACACCGATTGGGAAGAACGACAAT TGCAAAGGCCAGTGTGTGGAGAACACCAACTGTACCCTTATCTCCCAGGA GCTTGATTTGTATGGCTACGTTTGCCCAGACGGGTACTTCGGGACTGCGC GGCATTGTCCCCGGGGTCGTGAGCCTCCGCCTACTTTCTTTGACGAGGCT GGAAATTTGTTGGGGAAGATGCAGGCGGATGAATATTGTGGGTGTCAACC CAAGGTAAGCAGAAGAGGAGGGAGGATGTCACTGCCCTGCTTGCTTGATT CAATCCTGTAATTTTTTCATGTAAGGCAGTTTTCTTGTATTATGACGCGT CGTCTCCTTGAATTTCACGACACTTACTGCATTCCTCCCTCCCTCCCCTT TACTTCCTCCCTTGCCCTCCTGACAGGTCACGGATTGGTGCATGGGCAAA GATTGTGGGGAACACGCCGTGTGTCAAAATGCAGCCAACTCCCACCGCTG CGTGTGCGATGCAGGCTACGTAGAAGAACAGGGTTGATGTGTGGATAAGG CGGGTGTGCCGTTGTTGTTGGAAGGCCCGGAGGTAGTGACGGTGGTGCAG GGGGACGCTTACGAAGATCGCTTAGTCCGCATCATGGACACTAATGAGAT GTTAGCCGAGCCAAGGTACGTGAGGTGTAAAAAAAAGGCGAAAGAATTGT TAATGCTTGGAAATCCCATTCCTTGCAGTAGACCCAGTAGCTGCAGCAGT TGCAGCGGCAAGAACATCATTATCACCTTTCACCCCCCTCCCTCCCACCC TCCCTCCCTCCCTCCCTCCTCCCTCCTCCTGCCGTTAGGTACATCTCTAT CTCCTACGACTCCCCCAGCTTGAATGCCGATACCCTCGACGATGTTGGTA CCTATTTCATTAGCTACACCGTCAAGGCCCCCTGGACCAGCACCCCCACT GTGACCATTCGCCGAACGATTGTCGTGAAAGATTTGAACGAGTGCAGCCT CCGACCCACCGATGCGAAATGGAACAAATGGCGGCCACGCTGTCATAAGT GGGCGAAATGCTCCAACATCAACGGGGATATACGTGCTCGTGCCGCCCTG GCACCATTGGAGATGGTGCAGAAGGCAACAGCACGTGTCTCAAGGAGGAA GGGAACTTTACCCCGAGGAATGCGAAGAACGGCACTGGCTGCGTGGATGT GAAAGCACCTGTGTTGGTGGTGCCTTCGTTTGAGAAGACGTTTCAAACAT GTAAATGTGAGGGGCTGGGAGGACCGGGCACGCCAGCGCCTCCTGGATGT GCTGCTCGTGGCTATGGCAAGGAGCTCAGGGAGTTGACCGTGGGGGGAGG GGGGGAGGGAAGGGGTTTGTTGTGTACAGACGGGTGGCCTTGTTTTGAGG CCTATGATGACTTGCCGGACGGCACGCGGGTGAATTTGACTCGGCGAGTG GTAATGGGACCAGACGTAGAAGAAGATGTAGAGAACCACACGGCGGTGAA GGCTGGGAAGAAAACGAAGTTTTTTGTGTTGCCTTTGAGTGTGGAGGATG ATGCCGGTAACAAGGCACGCTCACAGTTGCGGTTTTCGGTGGAAGAGGTG TCCTTGTTCTCGCACACGTCTCTGCTGGGAAGGGGAGGAAAGAATAACAA GCCGAACTGGTCTCGCGCCCCCCCTTCAACTCCTCCTACACCTGTTGCTC CTTCTGTTTTGAAAGTAGCGAAAATGAGGAGGAGGGGGAGGACAACGACA GTGAGGAGGAGTTGCGGCAGGATGAGAAGAGGGAGAAAAGTAAGCTTGCG AAGCGCGACGTTGGTGCTGGTACGACTGCTGCCGCTGCTGCTGCCGCCGC TGTGTCAAGTCCTCCAGCTCATCGACCAAGCTGTGATAGCGACGCCGAGC CTACGGGAGAAACAGAGGTCAATAAGGAGGAGGATTTTGATGGAGAAGCT GTGTTGTTGGTCATCCTCCTCATTTTGTGCAGTCTTGGGGCTTGGATTTA CAGCAGCAGCAACAACTGCGGTGATGTGCTCGCTCCGGATGAAATAAGCG TGGGAGGGGGCGAAACAAGGGATGTGGGGGACGATGCGTTTGTGTACCAG GAGGGTCTTACTCCAAATAGTCGACGAAATAGATTTAGTTCGCCAGGAGT GAGGTTAGGCGTATCCCCTTATGCATCACCGCAATCATACCGTGAGGGAG AGAGGTAG
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Coding sequence (CDS) from alignment at chr2:616958..619315-

>NO02G02200.1 ID=NO02G02200.1|Name=NO02G02200.1|organism=Nannochloropsis oceanica|type=CDS|length=1455bp|location=Sequence derived from alignment at chr2:616958..619315- (Nannochloropsis oceanica)
ATGAGTCGGCTCGCTGCGAAGACACGGAGGAAAGCTACCATTACGTTTGC
CCATCGGGGTTTGAAGGAGAGCAAGGGACAGGTCAAGGCCGCTGCACCGG
AGCCATTTCCACGCAGTCCTGCTGTGGTATCGTGGGAGCTTGATTTGTAT
GGCTACGTTTGCCCAGACGGGTACTTCGGGACTGCGCGGCATTGTCCCCG
GGGTCGTGAGCCTCCGCCTACTTTCTTTGACGAGGCTGGAAATTTGTTGG
GGAAGATGCAGGCGGATGAATATTGTGGGTGTCAACCCAAGGTCACGGAT
TGGTGCATGGGCAAAGATTGCCCGGAGGTAGTGACGGTGGTGCAGGGGGA
CGCTTACGAAGATCGCTTAGTCCGCATCATGGACACTAATGAGATGTTAG
CCGAGCCAAGGTACATCTCTATCTCCTACGACTCCCCCAGCTTGAATGCC
GATACCCTCGACGATGTTGAAGGCAACAGCACGTGTCTCAAGGAGGAAGG
GAACTTTACCCCGAGGAATGCGAAGAACGGCACTGGCTGCGTGGATGTGA
AAGCACCTGTGTTGGTGGTGCCTTCGTTTGAGAAGACGTTTCAAACATGT
AAATGTGAGGGGCTGGGAGGACCGGGCACGCCAGCGCCTCCTGGATGTGC
TGCTCGTGGCTATGGCAAGGAGCTCAGGGAGTTGACCGTGGGGGGAGGGG
GGGAGGGAAGGGGTTTGTTGTGTACAGACGGGTGGCCTTGTTTTGAGGCC
TATGATGACTTGCCGGACGGCACGCGGGTGAATTTGACTCGGCGAGTGGT
AATGGGACCAGACGTAGAAGAAGATGTAGAGAACCACACGGCGGTGAAGG
CTGGGAAGAAAACGAAGTTTTTTGTGTTGCCTTTGAGTGTGGAGGATGAT
GCCGGTAACAAGGCACGCTCACAGTTGCGGTTTTCGGTGGAAGAGGTGTC
CTTGTTCTCGCACACCGAAAATGAGGAGGAGGGGGAGGACAACGACAGTG
AGGAGGAGTTGCGGCAGGATGAGAAGAGGGAGAAAAGTAAGCTTGCGAAG
CGCGACGTTGGTGCTGGTACGACTGCTGCCGCTGCTGCTGCCGCCGCTGT
GTCAAGTCCTCCAGCTCATCGACCAAGCTGTGATAGCGACGCCGAGCCTA
CGGGAGAAACAGAGGTCAATAAGGAGGAGGATTTTGATGGAGAAGCTGTG
TTGTTGGTCATCCTCCTCATTTTGTGCAGTCTTGGGGCTTGGATTTACAG
CAGCAGCAACAACTGCGGTGATGTGCTCGCTCCGGATGAAATAAGCGTGG
GAGGGGGCGAAACAAGGGATGTGGGGGACGATGCGTTTGTGTACCAGGAG
GGTCTTACTCCAAATAGTCGACGAAATAGATTTAGTTCGCCAGGAGTGAG
GTTAGGCGTATCCCCTTATGCATCACCGCAATCATACCGTGAGGGAGAGA
GGTAG
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Synonyms
Publications