NO02G02140, NO02G02140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02140 vs. NCBI_GenBank
Match: EWM30528.1 (protein of unknown function DUF399 [Nannochloropsis gaditana]) HSP 1 Score: 558.9 bits (1439), Expect = 1.400e-155 Identity = 297/374 (79.41%), Postives = 329/374 (87.97%), Query Frame = 0 Query: 56 TSYLLQAMLLLLLWHTPLALAFTLPASSYLKMALKPDSPSPLTAVSRSDLFKGVGLXXXXXXXXXXXXXXXXSAQAEADMVVRRPILSERIFDTKRRSFLPAEINRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALTSLPKIGDGESFSPKVGDWMYFIEKA 430 +S L + +LL P + + +S M+L+PDS SPL ++ R DL KG+G+ XXXXXXXXXXXXX +AQAEA+++VRRP LSERIFDT+RRSFLPAE+NRLMHNKALDQRVVCIGEVHND QHYAEYSILQAVHKRRGA GLTVGLEMFYRQHQ ILD+YVFGKGTLASLKEDTKWDKTWGHKMA YAKIFQYAKA+GIRLCGLNVPQPVVQVVRQ+GLEHIPE+LRRRLPAVVDLSN AHREDFLATMRYF+ FH GG+ GGGIPEEALERLYEAQTLWDEYMAESA +LEA+ SRMIVLAGTNHIQNRYGVPDRI RRLGGQPVFTILPVSV+FDA+TSLP IGDGES+ ++GDW+YFIEKA Sbjct: 18 SSGTLLLLTFILLLPGPASAFCRVHSSKAPSMSLQPDS-SPL-SIPRVDLLKGMGI-AXXXXXXXXXXXXXKAAQAEANVIVRRPFLSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFH-GGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEKA 387
BLAST of NO02G02140 vs. NCBI_GenBank
Match: CBN76581.1 (protein of unknown function DUF399 [Ectocarpus siliculosus]) HSP 1 Score: 253.1 bits (645), Expect = 1.600e-63 Identity = 139/289 (48.10%), Postives = 186/289 (64.36%), Query Frame = 0 Query: 144 ERIFDTKRRSFLPAEINRLMH-NKALDQRVVCIGEVHNDGLQHYAEYSILQAVHK--RRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALTSLPKIG--DGESFSPKVGDWMYFIE 428 ERIFDT R+SF+PA+ +RL+ RVVC GE+H L H ++ +++AV + L +GLEMFYRQ Q LD YVF G LA+LK DTKWD+TWG YAKIF YA+ NGIRL GLN PQ ++ ++ ++G+ +P+ LR LP +DLSN+AHR+ F + G +G GI A+ R+YEAQTLWDEYMAESA + L+ AG R+++LAG H+Q R G+PDR+ RR G +P FTI+PVSVE+ LP I G +F+ DW+YF + Sbjct: 54 ERIFDTARKSFVPADPSRLIFPGVGFADRVVCTGEMHTHPLHHRMQFEVIKAVASVTKAKTEPLAIGLEMFYRQQQDALDRYVFNHGDLAALKLDTKWDETWGFDFNQYAKIFHYARENGIRLVGLNAPQSLLHLINKVGIAGLPQRLREVLPE-MDLSNMAHRKRFEDAI-------NGFQHGAGIDAAAMNRMYEAQTLWDEYMAESASRYLQ-RAGGRIVLLAGNGHVQARDGIPDRVERRTGLKP-FTIVPVSVEWTE-DGLPDIDHPPGTAFA----DWVYFTQ 327
BLAST of NO02G02140 vs. NCBI_GenBank
Match: XP_005536857.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM80821.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 197.2 bits (500), Expect = 1.000e-46 Identity = 114/296 (38.51%), Postives = 166/296 (56.08%), Query Frame = 0 Query: 146 IFDTKRRSFLPAEINRLMHNKALD---QRVVCIGEVHNDGLQHYAEYSILQAVHKR-RG-------AAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDL-SNVAHREDFLATMRYFS-RFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEF--DALTSLPKIGDGESFSPKVGDWMYFI 427 IFDT SFLP RL+ + + V+ +GE H D H + ++L + K RG A + +G+E FYRQHQ LD Y+ GK L L T+++ T+G+ + I +YA+ N I++ GLN P +VQ+V GL+H+PE L LP +D+ N AHRE F+ M+ HG N E AL+R+YE+Q LWDEYM+ESA LE N + + AG H++ R G+PDR+TRR G+P FT++P +V F D +P G+ + VGDW++++ Sbjct: 122 IFDTMIGSFLPPRPERLLSRRIRHKGARSVLLVGETHTDRQHHRVQLALLDSFVKHVRGQRNESIAGAPIAIGMEHFYRQHQVHLDRYIAGKIELRQLLAITRFELTFGYSAQLWQDILEYARENRIQVVGLNTPFELVQLVAHYGLDHLPERLYEVLPRDMDVHGNAAHRERFIQRMKALGVEAHGPLIN----DEAALQRMYESQVLWDEYMSESAALWLERNPRGHLCIFAGNGHVEGRVGIPDRLTRR-SGRPTFTVVPYTVPFQSDGWPDIPHPGNRD-----VGDWLWYL 407
BLAST of NO02G02140 vs. NCBI_GenBank
Match: XP_005715972.1 (unnamed protein product [Chondrus crispus] >CDF36153.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 174.9 bits (442), Expect = 5.500e-40 Identity = 95/276 (34.42%), Postives = 153/276 (55.43%), Query Frame = 0 Query: 144 ERIFDTKRRSFLPAEINRLMHNKALD---QRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEA-LERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALT--SLPKIGDGE 414 +R++D++ SF+PA + + + R + GE+H++ H A+ +++ + A LTVG E FYR H LD ++ GK + L + T+W +TWG Y IF+Y + N I + GLN+P V+ V GLE +PE L++ LP +D+ N H F+ + S S+ G P++A L+R YEAQ LW+E+M++S L+ G+RM+ L G+ H++ RYG P+RI RR +P +T++P V + + S+P I E Sbjct: 71 DRLYDSRSGSFVPASALAALLRRDVGLSFNRCIVAGEIHDNVCTHAAQLAVIDGAARLPDAMPLTVGFEQFYRMHNMYLDAFIEGKISTGELLQKTRWAETWGFDPKLYTPIFEYCRDNQIPMVGLNLPVQFVKQVSNYGLEGLPEGLKQFLPDNMDVGNKEHYRHFMQLIGVDS------SHIGANPDQALLDRYYEAQVLWEEWMSQSVAMSLKDRPGTRMVALIGSGHVEGRYGFPNRIERRSAERP-YTVVPRPVAWTSNEGHSMPNISRPE 339
BLAST of NO02G02140 vs. NCBI_GenBank
Match: OSX77957.1 (hypothetical protein BU14_0127s0054 [Porphyra umbilicalis]) HSP 1 Score: 173.7 bits (439), Expect = 1.200e-39 Identity = 105/277 (37.91%), Postives = 149/277 (53.79%), Query Frame = 0 Query: 167 ALDQRVVCIGEVHNDGLQHYAEYSILQAVHK----------RRGAAG--LTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPE----EALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEF--DALTSLPKIGDGESFSPKVGDWMYF 426 AL R+V +GE H H + I++A+H AAG + VGLE F+RQH P LD YV G+ +L L T W TWG+ A Y +F+Y +A+ +R+ GLN P +V V + GL+ +P + LP +DL + H F A M + L YEA+TLWDEYMAESA +VL A+ R++VLAGT H++ R G+P+R+ RR+GG+ FT+LP SV + A TS+P I D + DW+++ Sbjct: 93 ALIDRLVVVGETHTHPTHHRIQLDIIRALHDLSTASPSAAGASAAAGRPVVVGLEQFHRQHTPHLDAYVGGRISLPRLLALTDWAHTWGYPAALYTPLFRYCRAHRVRMVGLNAPAALVAAVARGGLDSLPASVVPYLPE-MDLGSRPHFARFAAKMSAXXXXXXXXXXXXXXXXRFDLQVLRHYYEAETLWDEYMAESAAEVLAADPAVRLVVLAGTAHVEARDGLPERVERRVGGR-AFTVLPTSVRWASAAGTSVPDI-DAPLGGGGLADWIWY 366
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_015161495.1 (iron-regulated protein [Chamaesiphon minutus] >AFY95391.1 uncharacterized iron-regulated protein [Chamaesiphon minutus PCC 6605]) HSP 1 Score: 148.7 bits (374), Expect = 4.200e-32 Identity = 86/244 (35.25%), Postives = 141/244 (57.79%), Query Frame = 0 Query: 172 VVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAV--VDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFT--ILPVSVEFDALTSLPKIGD 412 V+ +GE H+ + + +I++A+ + + +G+EMF R QP+LD Y+ GK T+A L+ +++DK WG+K YA I ++AKAN + + LN P + + + GLE + R+ +P + +D SN +++ L + R H G + I ++ +R Y AQ LWDE MAE ++ N S+ +V+AG++HI YG+PDR+ RR+ G P FT + +S++ D LTS PK D Sbjct: 56 VIYLGETHDRPIDRQHQLAIIEALFQHN--PQVAIGMEMFQRPAQPLLDRYLAGKITVAELRVQSEFDKRWGYKWEDYAPILEFAKANRLPVIALNTPTEITRKAAREGLESLTAAERQWIPPLTEIDRSNAKYQQMILGSYRQ----HAGIVS---ISSKSFDRFYNAQLLWDETMAERVANFVKQNPRSQKVVIAGSSHIIYGYGIPDRVLRRVSG-PKFTQKTVLLSLDRDLLTS-PKPAD 288
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_075598615.1 (hypothetical protein [Leptolyngbya sp. 'hensonii'] >OLP18353.1 hypothetical protein BST81_11195 [Leptolyngbya sp. 'hensonii']) HSP 1 Score: 148.3 bits (373), Expect = 5.500e-32 Identity = 80/248 (32.26%), Postives = 137/248 (55.24%), Query Frame = 0 Query: 140 PILSERIFDTKRRSFLPAEINRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDL--SNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRL 386 P L++++F R + E ++ + A V+ +GE H+ H + +++ +H++ L +GLEMF R +QP+LD+Y+ G+ T L++ +++D+ WG+ +YYA I +YA+ + + L LN P + + V + GLE + R +P + +L NVA+R + + H G S G ER + AQ LWDE MAE+ + L A +++VLAG H+ + YG+PDR+ RR+ Sbjct: 23 PALAQQVFSPPLRQVMTLE--EVLQDLA-QATVIYLGETHDRPADHETQLDLIRQLHRKN--PRLAIGLEMFQRPYQPVLDQYLAGRITEEELRQQSQYDQRWGYPWSYYAPILRYAREHRLPLLALNSPSEITRKVARQGLESLTAAERAMIPPIAELRTDNVAYRR---MMRQIYEGIHKGQSASGN-----FERFFLAQVLWDETMAETIARFLTAQPDYQVVVLAGQGHVVHGYGIPDRVARRM 257
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_106301612.1 (iron-regulated protein [Chamaesiphon polymorphus] >PSB58014.1 iron-regulated protein [Chamaesiphon polymorphus CCALA 037]) HSP 1 Score: 148.3 bits (373), Expect = 5.500e-32 Identity = 87/244 (35.66%), Postives = 139/244 (56.97%), Query Frame = 0 Query: 172 VVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAV--VDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVF--TILPVSVEFDALTSLPKIGD 412 V+ +GE H+ + + SI+QA+ + + +G+EMF R QP+LD Y+ GK T A L+ +++DK WG+K YA I ++AKAN + + LN P + + + GLE + R+ +P + +D SN +++ L + R H G + I ++ +R Y AQ LWDE MAE ++ N + +V+AG++HI YG+PDR+ RR+GG T+L +S++ D LTS PK D Sbjct: 56 VIYLGETHDRPIDRQHQLSIIQALFQHN--PQVAIGMEMFQRPAQPLLDRYLAGKITAAELRVQSEFDKRWGYKWEDYAPILEFAKANRLPVIALNTPTEITRKAAREGLESLTAAERQWIPPLTEIDRSNAKYQQMILGSYRQ----HAGIVS---ISSKSFDRFYNAQLLWDETMAERVANFVKQNPRYQKVVIAGSSHIIYGYGIPDRVLRRVGGSKFTQKTVL-LSLDRDLLTS-PKPAD 288
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_096830346.1 (hypothetical protein [Tychonema bourrellyi] >PHX55701.1 hypothetical protein CP500_009400 [Tychonema bourrellyi FEM_GT703]) HSP 1 Score: 146.4 bits (368), Expect = 2.100e-31 Identity = 86/254 (33.86%), Postives = 133/254 (52.36%), Query Frame = 0 Query: 160 NRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDL--SNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALTSLPKIGD 412 N+ + + L R+V +GE H+ H A+ +I+Q + ++ + + LEMF R Q +LD+Y+ GK T L E T++++ W YYA I ++AK N +R+ LN P V + V GLE + + R+ +P V ++ N +R+ L + + G S A +R +AQ LWDE MAE Q ++AN +++VLAG HI YG+P R+ RRLG V + SV F+ T P D Sbjct: 40 NQEILQQLLKARIVYLGETHDSIEDHQAQLAIIQEMQRQN--RKIAIALEMFQRPFQSVLDQYLAGKLTEEQLIEQTEYNQRWRFPWEYYAPIVRFAKENQLRIIALNTPTEVTRKVAMQGLESLTTEERKHIPPVSEIRTDNAEYRQMLLEVYQQHQKAAQGNST-------AFQRFLQAQVLWDETMAEKIAQFVKANPDYQVVVLAGQGHIVYGYGIPSRVERRLG---VGKVKMRSVLFNFPTDSPSSAD 281
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_015193300.1 (DUF399 domain-containing protein [Stanieria cyanosphaera] >AFZ35632.1 protein of unknown function DUF399 [Stanieria cyanosphaera PCC 7437]) HSP 1 Score: 143.3 bits (360), Expect = 1.800e-30 Identity = 76/216 (35.19%), Postives = 123/216 (56.94%), Query Frame = 0 Query: 172 VVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAV--VDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRL 386 VV +GE H+ +H A+ I+ A++++ + + LEMF R QP+LD Y+ G+ + L+E+T++D+ WG YYA I ++AK + + + LN P + + V GLE + + R +P V +DL N A+R+ + Y + H G N G + + AQ LWDE MA++ Q +AN ++IVLAG HI + YG+P+R+ RR+ Sbjct: 53 VVYLGENHDSLAEHQAQLEIITALYQQN--QRIAIALEMFQRPFQPVLDRYLAGEISETQLREETEYDQRWGFDWEYYAPILRFAKRHNLPIIALNTPTEITRKVASQGLESLSGEDFRYIPPVAEIDLDNQAYRQ--MLQNIYSNHAHNGHGNSDG-----FDNFFAAQVLWDETMADAIAQFYQANPNYQIIVLAGQGHIVHGYGIPERVQRRI 259 The following BLAST results are available for this feature:
BLAST of NO02G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02140 ID=NO02G02140|Name=NO02G02140|organism=Nannochloropsis oceanica|type=gene|length=3772bpback to top protein sequence of NO02G02140.1 >NO02G02140.1-protein ID=NO02G02140.1-protein|Name=NO02G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bpback to top Synonyms
Publications
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