NO02G02140, NO02G02140 (gene) Nannochloropsis oceanica

Overview
NameNO02G02140
Unique NameNO02G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3772
Alignment locationchr2:604445..608216 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:604445..608216 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007314DUF399
Homology
BLAST of NO02G02140 vs. NCBI_GenBank
Match: EWM30528.1 (protein of unknown function DUF399 [Nannochloropsis gaditana])

HSP 1 Score: 558.9 bits (1439), Expect = 1.400e-155
Identity = 297/374 (79.41%), Postives = 329/374 (87.97%), Query Frame = 0
Query:   56 TSYLLQAMLLLLLWHTPLALAFTLPASSYLKMALKPDSPSPLTAVSRSDLFKGVGLXXXXXXXXXXXXXXXXSAQAEADMVVRRPILSERIFDTKRRSFLPAEINRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALTSLPKIGDGESFSPKVGDWMYFIEKA 430
            +S  L  +  +LL   P +    + +S    M+L+PDS SPL ++ R DL KG+G+  XXXXXXXXXXXXX +AQAEA+++VRRP LSERIFDT+RRSFLPAE+NRLMHNKALDQRVVCIGEVHND  QHYAEYSILQAVHKRRGA GLTVGLEMFYRQHQ ILD+YVFGKGTLASLKEDTKWDKTWGHKMA YAKIFQYAKA+GIRLCGLNVPQPVVQVVRQ+GLEHIPE+LRRRLPAVVDLSN AHREDFLATMRYF+ FH GG+ GGGIPEEALERLYEAQTLWDEYMAESA  +LEA+  SRMIVLAGTNHIQNRYGVPDRI RRLGGQPVFTILPVSV+FDA+TSLP IGDGES+  ++GDW+YFIEKA
Sbjct:   18 SSGTLLLLTFILLLPGPASAFCRVHSSKAPSMSLQPDS-SPL-SIPRVDLLKGMGI-AXXXXXXXXXXXXXKAAQAEANVIVRRPFLSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFH-GGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEKA 387          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: CBN76581.1 (protein of unknown function DUF399 [Ectocarpus siliculosus])

HSP 1 Score: 253.1 bits (645), Expect = 1.600e-63
Identity = 139/289 (48.10%), Postives = 186/289 (64.36%), Query Frame = 0
Query:  144 ERIFDTKRRSFLPAEINRLMH-NKALDQRVVCIGEVHNDGLQHYAEYSILQAVHK--RRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALTSLPKIG--DGESFSPKVGDWMYFIE 428
            ERIFDT R+SF+PA+ +RL+        RVVC GE+H   L H  ++ +++AV    +     L +GLEMFYRQ Q  LD YVF  G LA+LK DTKWD+TWG     YAKIF YA+ NGIRL GLN PQ ++ ++ ++G+  +P+ LR  LP  +DLSN+AHR+ F   +        G  +G GI   A+ R+YEAQTLWDEYMAESA + L+  AG R+++LAG  H+Q R G+PDR+ RR G +P FTI+PVSVE+     LP I    G +F+    DW+YF +
Sbjct:   54 ERIFDTARKSFVPADPSRLIFPGVGFADRVVCTGEMHTHPLHHRMQFEVIKAVASVTKAKTEPLAIGLEMFYRQQQDALDRYVFNHGDLAALKLDTKWDETWGFDFNQYAKIFHYARENGIRLVGLNAPQSLLHLINKVGIAGLPQRLREVLPE-MDLSNMAHRKRFEDAI-------NGFQHGAGIDAAAMNRMYEAQTLWDEYMAESASRYLQ-RAGGRIVLLAGNGHVQARDGIPDRVERRTGLKP-FTIVPVSVEWTE-DGLPDIDHPPGTAFA----DWVYFTQ 327          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: XP_005536857.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM80821.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 197.2 bits (500), Expect = 1.000e-46
Identity = 114/296 (38.51%), Postives = 166/296 (56.08%), Query Frame = 0
Query:  146 IFDTKRRSFLPAEINRLMHNKALD---QRVVCIGEVHNDGLQHYAEYSILQAVHKR-RG-------AAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDL-SNVAHREDFLATMRYFS-RFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEF--DALTSLPKIGDGESFSPKVGDWMYFI 427
            IFDT   SFLP    RL+  +      + V+ +GE H D   H  + ++L +  K  RG        A + +G+E FYRQHQ  LD Y+ GK  L  L   T+++ T+G+    +  I +YA+ N I++ GLN P  +VQ+V   GL+H+PE L   LP  +D+  N AHRE F+  M+      HG   N     E AL+R+YE+Q LWDEYM+ESA   LE N    + + AG  H++ R G+PDR+TRR  G+P FT++P +V F  D    +P  G+ +     VGDW++++
Sbjct:  122 IFDTMIGSFLPPRPERLLSRRIRHKGARSVLLVGETHTDRQHHRVQLALLDSFVKHVRGQRNESIAGAPIAIGMEHFYRQHQVHLDRYIAGKIELRQLLAITRFELTFGYSAQLWQDILEYARENRIQVVGLNTPFELVQLVAHYGLDHLPERLYEVLPRDMDVHGNAAHRERFIQRMKALGVEAHGPLIN----DEAALQRMYESQVLWDEYMSESAALWLERNPRGHLCIFAGNGHVEGRVGIPDRLTRR-SGRPTFTVVPYTVPFQSDGWPDIPHPGNRD-----VGDWLWYL 407          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: XP_005715972.1 (unnamed protein product [Chondrus crispus] >CDF36153.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 174.9 bits (442), Expect = 5.500e-40
Identity = 95/276 (34.42%), Postives = 153/276 (55.43%), Query Frame = 0
Query:  144 ERIFDTKRRSFLPAEINRLMHNKALD---QRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEA-LERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALT--SLPKIGDGE 414
            +R++D++  SF+PA     +  + +     R +  GE+H++   H A+ +++    +   A  LTVG E FYR H   LD ++ GK +   L + T+W +TWG     Y  IF+Y + N I + GLN+P   V+ V   GLE +PE L++ LP  +D+ N  H   F+  +   S      S+ G  P++A L+R YEAQ LW+E+M++S    L+   G+RM+ L G+ H++ RYG P+RI RR   +P +T++P  V + +    S+P I   E
Sbjct:   71 DRLYDSRSGSFVPASALAALLRRDVGLSFNRCIVAGEIHDNVCTHAAQLAVIDGAARLPDAMPLTVGFEQFYRMHNMYLDAFIEGKISTGELLQKTRWAETWGFDPKLYTPIFEYCRDNQIPMVGLNLPVQFVKQVSNYGLEGLPEGLKQFLPDNMDVGNKEHYRHFMQLIGVDS------SHIGANPDQALLDRYYEAQVLWEEWMSQSVAMSLKDRPGTRMVALIGSGHVEGRYGFPNRIERRSAERP-YTVVPRPVAWTSNEGHSMPNISRPE 339          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: OSX77957.1 (hypothetical protein BU14_0127s0054 [Porphyra umbilicalis])

HSP 1 Score: 173.7 bits (439), Expect = 1.200e-39
Identity = 105/277 (37.91%), Postives = 149/277 (53.79%), Query Frame = 0
Query:  167 ALDQRVVCIGEVHNDGLQHYAEYSILQAVHK----------RRGAAG--LTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPE----EALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEF--DALTSLPKIGDGESFSPKVGDWMYF 426
            AL  R+V +GE H     H  +  I++A+H              AAG  + VGLE F+RQH P LD YV G+ +L  L   T W  TWG+  A Y  +F+Y +A+ +R+ GLN P  +V  V + GL+ +P  +   LP  +DL +  H   F A M                      + L   YEA+TLWDEYMAESA +VL A+   R++VLAGT H++ R G+P+R+ RR+GG+  FT+LP SV +   A TS+P I D       + DW+++
Sbjct:   93 ALIDRLVVVGETHTHPTHHRIQLDIIRALHDLSTASPSAAGASAAAGRPVVVGLEQFHRQHTPHLDAYVGGRISLPRLLALTDWAHTWGYPAALYTPLFRYCRAHRVRMVGLNAPAALVAAVARGGLDSLPASVVPYLPE-MDLGSRPHFARFAAKMSAXXXXXXXXXXXXXXXXRFDLQVLRHYYEAETLWDEYMAESAAEVLAADPAVRLVVLAGTAHVEARDGLPERVERRVGGR-AFTVLPTSVRWASAAGTSVPDI-DAPLGGGGLADWIWY 366          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_015161495.1 (iron-regulated protein [Chamaesiphon minutus] >AFY95391.1 uncharacterized iron-regulated protein [Chamaesiphon minutus PCC 6605])

HSP 1 Score: 148.7 bits (374), Expect = 4.200e-32
Identity = 86/244 (35.25%), Postives = 141/244 (57.79%), Query Frame = 0
Query:  172 VVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAV--VDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFT--ILPVSVEFDALTSLPKIGD 412
            V+ +GE H+  +    + +I++A+ +      + +G+EMF R  QP+LD Y+ GK T+A L+  +++DK WG+K   YA I ++AKAN + +  LN P  + +   + GLE +    R+ +P +  +D SN  +++  L + R     H G  +   I  ++ +R Y AQ LWDE MAE     ++ N  S+ +V+AG++HI   YG+PDR+ RR+ G P FT   + +S++ D LTS PK  D
Sbjct:   56 VIYLGETHDRPIDRQHQLAIIEALFQHN--PQVAIGMEMFQRPAQPLLDRYLAGKITVAELRVQSEFDKRWGYKWEDYAPILEFAKANRLPVIALNTPTEITRKAAREGLESLTAAERQWIPPLTEIDRSNAKYQQMILGSYRQ----HAGIVS---ISSKSFDRFYNAQLLWDETMAERVANFVKQNPRSQKVVIAGSSHIIYGYGIPDRVLRRVSG-PKFTQKTVLLSLDRDLLTS-PKPAD 288          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_075598615.1 (hypothetical protein [Leptolyngbya sp. 'hensonii'] >OLP18353.1 hypothetical protein BST81_11195 [Leptolyngbya sp. 'hensonii'])

HSP 1 Score: 148.3 bits (373), Expect = 5.500e-32
Identity = 80/248 (32.26%), Postives = 137/248 (55.24%), Query Frame = 0
Query:  140 PILSERIFDTKRRSFLPAEINRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDL--SNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRL 386
            P L++++F    R  +  E   ++ + A    V+ +GE H+    H  +  +++ +H++     L +GLEMF R +QP+LD+Y+ G+ T   L++ +++D+ WG+  +YYA I +YA+ + + L  LN P  + + V + GLE +    R  +P + +L   NVA+R       + +   H G S  G       ER + AQ LWDE MAE+  + L A    +++VLAG  H+ + YG+PDR+ RR+
Sbjct:   23 PALAQQVFSPPLRQVMTLE--EVLQDLA-QATVIYLGETHDRPADHETQLDLIRQLHRKN--PRLAIGLEMFQRPYQPVLDQYLAGRITEEELRQQSQYDQRWGYPWSYYAPILRYAREHRLPLLALNSPSEITRKVARQGLESLTAAERAMIPPIAELRTDNVAYRR---MMRQIYEGIHKGQSASGN-----FERFFLAQVLWDETMAETIARFLTAQPDYQVVVLAGQGHVVHGYGIPDRVARRM 257          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_106301612.1 (iron-regulated protein [Chamaesiphon polymorphus] >PSB58014.1 iron-regulated protein [Chamaesiphon polymorphus CCALA 037])

HSP 1 Score: 148.3 bits (373), Expect = 5.500e-32
Identity = 87/244 (35.66%), Postives = 139/244 (56.97%), Query Frame = 0
Query:  172 VVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAV--VDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVF--TILPVSVEFDALTSLPKIGD 412
            V+ +GE H+  +    + SI+QA+ +      + +G+EMF R  QP+LD Y+ GK T A L+  +++DK WG+K   YA I ++AKAN + +  LN P  + +   + GLE +    R+ +P +  +D SN  +++  L + R     H G  +   I  ++ +R Y AQ LWDE MAE     ++ N   + +V+AG++HI   YG+PDR+ RR+GG      T+L +S++ D LTS PK  D
Sbjct:   56 VIYLGETHDRPIDRQHQLSIIQALFQHN--PQVAIGMEMFQRPAQPLLDRYLAGKITAAELRVQSEFDKRWGYKWEDYAPILEFAKANRLPVIALNTPTEITRKAAREGLESLTAAERQWIPPLTEIDRSNAKYQQMILGSYRQ----HAGIVS---ISSKSFDRFYNAQLLWDETMAERVANFVKQNPRYQKVVIAGSSHIIYGYGIPDRVLRRVGGSKFTQKTVL-LSLDRDLLTS-PKPAD 288          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_096830346.1 (hypothetical protein [Tychonema bourrellyi] >PHX55701.1 hypothetical protein CP500_009400 [Tychonema bourrellyi FEM_GT703])

HSP 1 Score: 146.4 bits (368), Expect = 2.100e-31
Identity = 86/254 (33.86%), Postives = 133/254 (52.36%), Query Frame = 0
Query:  160 NRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDL--SNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEFDALTSLPKIGD 412
            N+ +  + L  R+V +GE H+    H A+ +I+Q + ++     + + LEMF R  Q +LD+Y+ GK T   L E T++++ W     YYA I ++AK N +R+  LN P  V + V   GLE +  + R+ +P V ++   N  +R+  L   +   +   G S        A +R  +AQ LWDE MAE   Q ++AN   +++VLAG  HI   YG+P R+ RRLG   V  +   SV F+  T  P   D
Sbjct:   40 NQEILQQLLKARIVYLGETHDSIEDHQAQLAIIQEMQRQN--RKIAIALEMFQRPFQSVLDQYLAGKLTEEQLIEQTEYNQRWRFPWEYYAPIVRFAKENQLRIIALNTPTEVTRKVAMQGLESLTTEERKHIPPVSEIRTDNAEYRQMLLEVYQQHQKAAQGNST-------AFQRFLQAQVLWDETMAEKIAQFVKANPDYQVVVLAGQGHIVYGYGIPSRVERRLG---VGKVKMRSVLFNFPTDSPSSAD 281          
BLAST of NO02G02140 vs. NCBI_GenBank
Match: WP_015193300.1 (DUF399 domain-containing protein [Stanieria cyanosphaera] >AFZ35632.1 protein of unknown function DUF399 [Stanieria cyanosphaera PCC 7437])

HSP 1 Score: 143.3 bits (360), Expect = 1.800e-30
Identity = 76/216 (35.19%), Postives = 123/216 (56.94%), Query Frame = 0
Query:  172 VVCIGEVHNDGLQHYAEYSILQAVHKRRGAAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYAKIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAV--VDLSNVAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESAVQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRL 386
            VV +GE H+   +H A+  I+ A++++     + + LEMF R  QP+LD Y+ G+ +   L+E+T++D+ WG    YYA I ++AK + + +  LN P  + + V   GLE +  +  R +P V  +DL N A+R+  +    Y +  H G  N  G      +  + AQ LWDE MA++  Q  +AN   ++IVLAG  HI + YG+P+R+ RR+
Sbjct:   53 VVYLGENHDSLAEHQAQLEIITALYQQN--QRIAIALEMFQRPFQPVLDRYLAGEISETQLREETEYDQRWGFDWEYYAPILRFAKRHNLPIIALNTPTEITRKVASQGLESLSGEDFRYIPPVAEIDLDNQAYRQ--MLQNIYSNHAHNGHGNSDG-----FDNFFAAQVLWDETMADAIAQFYQANPNYQIIVLAGQGHIVHGYGIPERVQRRI 259          
The following BLAST results are available for this feature:
BLAST of NO02G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30528.11.400e-15579.41protein of unknown function DUF399 [Nannochloropsi... [more]
CBN76581.11.600e-6348.10protein of unknown function DUF399 [Ectocarpus sil... [more]
XP_005536857.11.000e-4638.51hypothetical protein, conserved [Cyanidioschyzon m... [more]
XP_005715972.15.500e-4034.42unnamed protein product [Chondrus crispus] >CDF361... [more]
OSX77957.11.200e-3937.91hypothetical protein BU14_0127s0054 [Porphyra umbi... [more]
WP_015161495.14.200e-3235.25iron-regulated protein [Chamaesiphon minutus] >AFY... [more]
WP_075598615.15.500e-3232.26hypothetical protein [Leptolyngbya sp. 'hensonii']... [more]
WP_106301612.15.500e-3235.66iron-regulated protein [Chamaesiphon polymorphus] ... [more]
WP_096830346.12.100e-3133.86hypothetical protein [Tychonema bourrellyi] >PHX55... [more]
WP_015193300.11.800e-3035.19DUF399 domain-containing protein [Stanieria cyanos... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006820NSK006820Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02140.1NO02G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574188gene_801Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02140.1NO02G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02140 ID=NO02G02140|Name=NO02G02140|organism=Nannochloropsis oceanica|type=gene|length=3772bp
CCACCCATAAGCACATGTGTAAATCAAAGCAGAGAGGGAATCTCGAAGCA
AAAGTGGCAATTTTTCCTCCGTGGTCAGAAAATTAAAAATTTCATTTATA
CATTTGCCGTTTCTTTTACCTCGACTACCCTTCTATCCTTCTCTGCATCT
CCTCATGGTGACTTCCCTCCCACTTTACTTTTGTTTGCTTTCCGGGCATC
ATCTGCTTCCGCTTTGGCCTTGGCGGCCTTCCCCCGCTCTTCCTCGATCG
CCTTCTCCAAGCACTCTTTCGCCCGATACACCTTTGACTGCAAATAAAAC
GATCCCCCCTTACCCGGCTCATTCTGCATAAAGTACTTGTCAAATTGCTC
GATCAATCGTGCTGGGTTTTTCATATCTGTCTTTTGCAAATTCAGGACCT
TGAGGGCTTCGTCCGGGGCCATCCCTCCATAAGTCCGGGAGGCGGCCTTG
GCGGCCGTGCCCCCACCTTGCTTGGCATTTTGCAAGGCCTGATGATATGC
TGCCACAAATGCACGGGAAAAGACGGATGCAGACATGACGGCGATGTTGA
CTAGCATCCGTACAAAAGGACCGCTCATGTTTACTTTGGGGGGGCCGGGG
GTGGTGGAGAGGGAGTCGTGGGCTGGAAGGAGGGAGATGGGAGATACGAC
TGGGGCTTGCCGCGGGACGATTAGGTTGTGGCGGGCACTGCTGGAAAGGT
GTTCGAGACGATGCTTTCTGGCGTCCACAGCGTCAAGTCAAACTGTGTGC
GGAGAATGGGGATGGGGTGGGGAGGCGAGTCAGAGGAAGGCAGGGTTGTC
GATCTCATGACATGCTCCAGCAGTTGCTCGCGGCAAGTATTGCCTCACTC
CTCCTGCCATGGTCACACATAACTTGTCTGTCTCAAGCATGCCAAGAACC
AGAGGAGGAGAAATGCATGAGAAAAGATACAGCTCGCAATGGCCTGGGAC
TGGTGGGAGCTTGATACGAATTGCTCATGATGACATATGAGACACAGACC
TTCGCGCATCGTAAAGCTTCCCAAAAAAGTCCCATCACTTTCCATCCGAA
GGGGCGATAAGCAGACACTGTCTGTGTGAACATGCTTGTGGACAAATCCA
CCACCACCACAGTGCAGAACCACTTATAAAATTCTTGGCGCAGGTTTTTT
TTTAAGCAATCCTCTCCCTTGGCTGGCAGTCTTGAAACCTTAAAACCTCT
CCTGATTTTTTACGCGTGCCCGGGCCACGCGCCTTGACAAAGCAGATGCC
TGACAACTTTCCCCGTCCATGTTTGACAGACTTCACCCACGCACTCACCA
CTCCACCTGTAATTTTGTTGAACAAAGGCCACTGTTTCGCCCTTACAACT
ACAATGGGTCTGCCAGGCTCGCAACGCCTTCGCCGCTGTCAAAAGCCTTC
CACTATGCCTACCTCCTATCTGCTGCAGGCCATGCTACTGCTCCTCTTGT
GGCACACACCCCTGGCATTGGCCTTCACCCTGCCTGCCTCGTCCTACCTC
AAAATGGCCCTGAAGCCGGACTCCCCCTCTCCCTTGACCGCCGTCTCACG
CTCGGACCTGTTCAAGGGTGTGGGCCTCGCTGGCTTGGGTGCGGCAGGAA
TCACTGGGGCAGGCATTACAGTTAAGTCCGCCCAGGCTGAAGCTGACATG
GTCGTGCGGCGTCCCATTTTGTCCGAACGCATCTTCGACACGAAGCGGCG
CTCGTTCTTGCCGGCCGAGATTAATCGCTTAATGCACAACAAGGCTCTGG
ACCAGCGGGTGGTTTGTATTGGGGAGGTTCACAATGATGGGCTCCAGCAC
TACGCCGAGTACTCCATCTTGCAAGCCGTCCACAAACGCCGAGGTGCTGC
GGGTTTGACCGTGGGTCTGGAGATGTTCTATCGACAACATCAGCCGATTC
TGGATGAGTACGTCTTCGGGAAAGGCACGCTGGCCTCGCTGAAGGAGGAC
ACGAAATGGGATAAGACCTGGGGGCACAAAATGGCGTATTATGCGAAAAT
TTTTCAGTATGCAAAAGCGAATGGCATTCGTCTCTGCGGCCTTAATGTAC
CTCAGCCGGTGGTACAAGTGGTGAGGCAGTTGGGTTTGGAGCACATCCCT
GAGGATCTGCGACGGCGGTTGCCGGCGGTGGTGGATTTGAGgtacataat
ggagggaggagagagagagggaatgcattaggaaaggattggagggttga
atcgtgtgtcccatgctattgtcttactactcccagcgagcccaatcatt
tcacccggccctcccttcatctcattcatacccacccacccacactcaca
cagCAACGTTGCCCACCGCGAGGACTTCCTGGCGACGATGCGGTACTTTT
CGCGTTTCCACGGGGGGGGCAGCAACGGGGGCGGGATCCCCGAGGAGGCA
TTGGAGCGACTCTACGAAGCCCAAACGCTGTGGGACGAATATATGGCCGA
AAGCGCCGTGCAAGTCCTGGAGGCCAATGCCGGTTCGCGGATGATCGTCT
TGGCGGGAACAAACCATATCCAGAACAGATATGGCGTGCCTGATCGCATT
ACCCGCCGCTTGGGAGGGCAGCCGGTGTTCACCATTTTGCCCGTATCGGT
GGAGTTTGACGCGTTGACCTCCTTGCCGAAAATCGGGGATGGGGAAAGTT
TCTCCCCGAAGGTGGGGGATTGGATGTACTTCATTGAGAAGGCCTGAAGG
GGGGAGGGAAGGTGGCAAGGAGCGGAGGGAAGTTGAAGAAGAGAAAGGCC
AAGCTCTGTCTATGGTGTAGATATTTTGGAGGAAATCTAGAATAAGGAAT
AGTTTCTATTTTTGTACCAGTGGTTTGTGTCCGTGCCTAAGTGGAGAAAT
CATAGACCTGTTGGGAACCTGGTGAAATAATATTGCCTTGGCCGAGAGAG
GGAGGGAATAATGGAGAAGCGGGAGCGCTTCAACCTTTGAGTTTTTCCGG
TTGGCTGTAATGTGACGGACAGGAGGCAGGCTGAAGGATGAAGGGGGGTG
TCGAGATGGCTTATGTGTCTCGACGGGTTAGATCAAGAGTGTGAGTGTCA
AGAAGAAGGGAGGACTTAAAATTTTCGGATAGGCAGGTAATGTTATATGT
ATAAAAAAAAACATGATACGGGATGTTTTAAACAGAAATATCGCGGAAGC
TCGGTAGTGTAAGCTTGAGGGAGAAGGAAGGATAGATGGACAGTGTACAT
GAAGGGCGTATTCTGTGAAATTATATTGACCACGCAGGAAAGAAAATGAG
TCGGGCGGTGATGGTTCGTGGAAAAAGAAGAGTAAGTGTGTCTATACCAG
CCTCGAAGTCATGTCATGACTGGGAGTTTTTCTGATTTCTGTACGACGCA
ACAGAGACCTTTAACCACAGCGCTCAAGGATCTGGATCCGTCGTTATGCG
CTCGGCACCAAGCAATGCATGTAGCCCACACCAAATGCCCTATGCAAGGT
ACCAAAAGAAAGGAATTATAATCGTGCCGACGATTGTTTGCAGTTCTTGA
TACGAGATATGCCCTGTGAGATTACCAATTTCATGATTATATGCATGTCG
GGCTCGAATGTAGATGTAATATGTACAAAAATATGCCCGAGCGCAAATTA
AGGTTGCCTTGTTCGACGTAGAAATGAAAAGCGAAGGTCGCTTTACGAGT
ACGGAGCTTTGACGTAGTTGAAAATGCTCCGCTTGCTGCCACCAGCCAGG
AAGTTGAAAGCTTCAGAGACCCATCGATTCCGGAAAATGTTGCCATTTGA
CTTTTCTTGTCTCGTTGTTTAT
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protein sequence of NO02G02140.1

>NO02G02140.1-protein ID=NO02G02140.1-protein|Name=NO02G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MPDNFPRPCLTDFTHALTTPPVILLNKGHCFALTTTMGLPGSQRLRRCQK
PSTMPTSYLLQAMLLLLLWHTPLALAFTLPASSYLKMALKPDSPSPLTAV
SRSDLFKGVGLAGLGAAGITGAGITVKSAQAEADMVVRRPILSERIFDTK
RRSFLPAEINRLMHNKALDQRVVCIGEVHNDGLQHYAEYSILQAVHKRRG
AAGLTVGLEMFYRQHQPILDEYVFGKGTLASLKEDTKWDKTWGHKMAYYA
KIFQYAKANGIRLCGLNVPQPVVQVVRQLGLEHIPEDLRRRLPAVVDLSN
VAHREDFLATMRYFSRFHGGGSNGGGIPEEALERLYEAQTLWDEYMAESA
VQVLEANAGSRMIVLAGTNHIQNRYGVPDRITRRLGGQPVFTILPVSVEF
DALTSLPKIGDGESFSPKVGDWMYFIEKA*
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Synonyms
Publications