NO02G01940, NO02G01940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01940 vs. NCBI_GenBank
Match: EWM30455.1 (gtp-binding nuclear protein ran [Nannochloropsis gaditana]) HSP 1 Score: 449.5 bits (1155), Expect = 5.800e-123 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 214 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL Sbjct: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
BLAST of NO02G01940 vs. NCBI_GenBank
Match: XP_009033865.1 (GTP-binding nuclear protein Ran [Aureococcus anophagefferens] >EGB11505.1 GTP-binding nuclear protein Ran [Aureococcus anophagefferens]) HSP 1 Score: 394.8 bits (1013), Expect = 1.700e-106 Identity = 187/209 (89.47%), Postives = 195/209 (93.30%), Query Frame = 0 Query: 5 IPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 214 +PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPL+FHTNRG IKFNVWDTAGQE+FGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL GDNNLHFVEAPALAPPE D D RYEQEL EAA +PLP++DDDL Sbjct: 3 MPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQERFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLCGDNNLHFVEAPALAPPEFNIDPVDAQRYEQELREAANIPLPEDDDDL 211
BLAST of NO02G01940 vs. NCBI_GenBank
Match: GAX22929.1 (GTP-binding nuclear protein Ran [Fistulifera solaris]) HSP 1 Score: 394.0 bits (1011), Expect = 2.900e-106 Identity = 186/212 (87.74%), Postives = 193/212 (91.04%), Query Frame = 0 Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDD 213 M IPEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPLLFHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE D + YEQE+ +AAA PLPD+DDD Sbjct: 1 MATEIPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNQLHFVEAPALQPPEATIDDATKILYEQEIADAAAQPLPDDDDD 212
BLAST of NO02G01940 vs. NCBI_GenBank
Match: GAX17717.1 (GTP-binding nuclear protein Ran [Fistulifera solaris]) HSP 1 Score: 392.9 bits (1008), Expect = 6.400e-106 Identity = 184/208 (88.46%), Postives = 192/208 (92.31%), Query Frame = 0 Query: 5 IPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDD 213 +PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPLLFHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE D + YEQE+ +AAA PLPD+DDD Sbjct: 4 VPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNQLHFVEAPALQPPEATIDDATKILYEQEIADAAAQPLPDDDDD 211
BLAST of NO02G01940 vs. NCBI_GenBank
Match: OEU19320.1 (ras-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 392.5 bits (1007), Expect = 8.400e-106 Identity = 185/207 (89.37%), Postives = 193/207 (93.24%), Query Frame = 0 Query: 6 PEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDD 213 PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE +D+N +YEQEL AAA PLP++DDD Sbjct: 7 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLNFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEFQFDENLKNQYEQELQAAAAQPLPEDDDD 213
BLAST of NO02G01940 vs. NCBI_GenBank
Match: CBJ27657.1 (RAN, Ras superfamily GTPase [Ectocarpus siliculosus]) HSP 1 Score: 383.6 bits (984), Expect = 3.900e-103 Identity = 180/213 (84.51%), Postives = 193/213 (90.61%), Query Frame = 0 Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 214 M +PEFKLILVGDGGVGKTTFV+RH+TGEFEK+YVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD NL FVE PAL PPE +Q D ++++QE+ AAA+PLPDEDDDL Sbjct: 1 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDANLQFVEQPALQPPEFVINQADQLKFQQEIDAAAAVPLPDEDDDL 213
BLAST of NO02G01940 vs. NCBI_GenBank
Match: ORY95544.1 (P-loop containing nucleoside triphosphate hydrolase protein [Syncephalastrum racemosum]) HSP 1 Score: 379.0 bits (972), Expect = 9.600e-102 Identity = 178/213 (83.57%), Postives = 188/213 (88.26%), Query Frame = 0 Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 214 M D IP FKL+LVGDGG GKTTFV+RHLTGEFEK+YVATLGVEVHPL FHTN GQI FN WDTAGQEKFGGLRDGYYIQGQCA+IMFDVTSRITYKNVPNWHRDL RVCENIPIVLCGNKV+IK+RKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL G+ NL FV APALAPPEV D N M +Y E+ EAAA PLP+EDDDL Sbjct: 1 MADQIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNFGQIVFNTWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDIKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGNANLEFVSAPALAPPEVQVDSNLMEQYRSEMAEAAAQPLPEEDDDL 213
BLAST of NO02G01940 vs. NCBI_GenBank
Match: XP_002183512.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45212.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 377.1 bits (967), Expect = 3.600e-101 Identity = 177/204 (86.76%), Postives = 187/204 (91.67%), Query Frame = 0 Query: 9 KLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDD 213 KLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPLLFHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR+TYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE D + +YE E+ AAA PLP++DD+ Sbjct: 8 KLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNQLHFVEAPALQPPETQIDDDTKRQYEAEIQAAAAQPLPEDDDE 211
BLAST of NO02G01940 vs. NCBI_GenBank
Match: CDS07831.1 (Putative GTP-binding nuclear protein GSP1/Ran [Lichtheimia ramosa]) HSP 1 Score: 376.7 bits (966), Expect = 4.700e-101 Identity = 177/213 (83.10%), Postives = 189/213 (88.73%), Query Frame = 0 Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 214 M++ P FKL+LVGDGG GKTTFV+RHLTGEFEK+YVATLGVEVHPL FHTN GQI FN WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDL RVCENIPIVLCGNKV+IK+RKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL G+ L FV APALAPPEV D N M +Y+QE+ EAAA PLP+EDDDL Sbjct: 1 MSEQTPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNFGQIVFNTWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDIKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPQLEFVAAPALAPPEVQVDNNLMQQYQQEMNEAAAQPLPEEDDDL 213
BLAST of NO02G01940 vs. NCBI_GenBank
Match: XP_006821108.1 (PREDICTED: uncharacterized protein LOC100374136 [Saccoglossus kowalevskii]) HSP 1 Score: 376.3 bits (965), Expect = 6.200e-101 Identity = 176/211 (83.41%), Postives = 187/211 (88.63%), Query Frame = 0 Query: 3 DFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 214 D +P FKL+LVGDGG GKTTFV+RHLTGEFEK+YVATLGVEVHPLLFHTNRG I+FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR+TYKNVPNWHRDL RVCENIPIVLCGNKV+IKDRKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GD NL FV PALAPPEV D +YE++L A A LPDEDDDL Sbjct: 8 DEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDPNLEFVAMPALAPPEVNMDPQLAAKYEEDLKHAQATALPDEDDDL 218 The following BLAST results are available for this feature:
BLAST of NO02G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01940 ID=NO02G01940|Name=NO02G01940|organism=Nannochloropsis oceanica|type=gene|length=1751bpback to top protein sequence of NO02G01940.1 >NO02G01940.1-protein ID=NO02G01940.1-protein|Name=NO02G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
|