NO02G01920, NO02G01920 (gene) Nannochloropsis oceanica

Overview
NameNO02G01920
Unique NameNO02G01920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2031
Alignment locationchr2:550423..552453 +

Link to JBrowse

Properties
Property NameValue
DescriptionGdp-mannose transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:550423..552453 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Homology
BLAST of NO02G01920 vs. NCBI_GenBank
Match: EWM30446.1 (gdp-mannose transporter [Nannochloropsis gaditana])

HSP 1 Score: 513.8 bits (1322), Expect = 4.500e-142
Identity = 289/391 (73.91%), Postives = 321/391 (82.10%), Query Frame = 0
Query:    1 MSLKGIGGRGGNF-YEGRDGTVADDEEINPLMVEMRQAK---GRLEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSLGDPASTAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLRPTLPR 388
            MS KGIG       Y    G   DDE  +PL++EMRQ K       G+        XXXXXXXXXXXXXXXXXXXXXX          AI+SCFAYTFCSITMVL NKALASQY ADIDFLVIAFQS+CAV LV+ CD +G IQ GS KFD +VA+QWLPVN+FFVSMLSTGFLSL++LNVPMVT+FKNLTNVGIMWGEW  YGAHVSLGAIL+CAIMILGA+LAAANDITFSGIGY WM+SNC C AGYVLYMKHATKTVRLPKF MVFYNNLLSLPILL GAAVRGE+  F+ +EDLHT +Y+SLS+YAGLVGF LNLATLWCVSNNSATTY+VVGA+NKIPLAV+GWL+F+TPIT KAL+FLS+SMCGGFLYTYTKL+E +    LPR
Sbjct:    1 MSTKGIGTEDSAIGYFKFKGATRDDEAEDPLLIEMRQTKNLASHSNGTGTSFVADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIISCFAYTFCSITMVLTNKALASQYDADIDFLVIAFQSLCAVLLVLSCDTLGFIQHGSAKFDPSVALQWLPVNLFFVSMLSTGFLSLRYLNVPMVTIFKNLTNVGIMWGEWSLYGAHVSLGAILACAIMILGAVLAAANDITFSGIGYFWMLSNCVCCAGYVLYMKHATKTVRLPKFAMVFYNNLLSLPILLAGAAVRGEYTTFLWSEDLHTAAYVSLSLYAGLVGFALNLATLWCVSNNSATTYSVVGAMNKIPLAVVGWLLFRTPITQKALIFLSLSMCGGFLYTYTKLREANQAAGLPR 391          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: CBN73911.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 283.1 bits (723), Expect = 1.300e-72
Identity = 145/297 (48.82%), Postives = 208/297 (70.03%), Query Frame = 0
Query:   82 ASTAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            A  A+ S  +Y+FCS++MV++NK LA  YK+D+ FLV+  Q + A  LV     +G        F+ + A +WLPV+I F +ML T F +L+ +NVPMVTVFKNLTN+ I+ G+W+F+    S   + S A+M+ GAL A+ ND+ F+  GY WMV+NCC TAGYVLYMKHATK+++LP+FGMVFYNNLL+  +L   A + G+F IF  T  L T++Y++  +++G+VG  LN A+LWCV   SATTYAVVG++N IP A+LG+ +F + I+ +   F+ +SM GGF+Y++ KL+E
Sbjct:   23 ALVAVSSSLSYSFCSVSMVMSNKLLAFTYKSDMAFLVVVGQCLVATILVEAVRRMG--YASYDPFNFSTARRWLPVSICFSAMLFTSFKALEVMNVPMVTVFKNLTNIVIVTGDWWFFQQAASWLVMFSMAVMVFGALFASYNDLDFNPWGYFWMVANCCTTAGYVLYMKHATKSIKLPRFGMVFYNNLLTTCLLTPAAFMMGDFTIFWTTPQLRTVTYMTALLFSGVVGVLLNFASLWCVGATSATTYAVVGSVNVIPTALLGYQLFDSAISTQMGEFMLVSMIGGFMYSFAKLQE 317          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: OEU09349.1 (putative GDP-mannose transporter [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 266.5 bits (680), Expect = 1.300e-67
Identity = 134/295 (45.42%), Postives = 199/295 (67.46%), Query Frame = 0
Query:   86 IMSCFAYTFCSITMVLANKALASQYK----ADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKL 377
            + +C +Y+FCS++MVL NK+LAS Y      D++ L++  Q++ AV  V GC  +G +   S  F+   A +W PVNIFF  ML TG  SL++ +VPMVT+FKN++N+    G++Y +G       +++  IM+ GA+ AA+ND++ S +G +WM+ NC   +GYVLYMKHAT+ V+L KFGMVFYNN+L +  LL  A   G+  +F  T  +HT  Y   +++AGLVGF LN A+L CV+ +  TTY  +G+LNKIP+A+LG+ +F + I+ +   F+++SMCGGFLY+Y KL
Sbjct:   99 LSTCLSYSFCSVSMVLVNKSLASSYNHLIDGDLNILLVVIQAIVAVFAVEGCKRLGWVDYPSFSFE--TAKEWAPVNIFFCLMLFTGMSSLQYNSVPMVTIFKNVSNITTAVGDYYCFGNKPEPLVVVAFGIMLSGAVAAASNDLSLSPMGILWMIGNCVSASGYVLYMKHATEKVKLSKFGMVFYNNVLCVVFLLPVAIAMGQTTVFFTTPAIHTPDYAMKNLFAGLVGFLLNFASLSCVATSGPTTYVTIGSLNKIPVAILGYYIFDSVISQETWFFIAVSMCGGFLYSYAKL 391          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GAX13784.1 (GDP-mannose transporter [Fistulifera solaris])

HSP 1 Score: 263.8 bits (673), Expect = 8.100e-67
Identity = 138/302 (45.70%), Postives = 199/302 (65.89%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQYK----ADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLR 383
            AI SC  Y+FCS++M+L NK+LAS Y      +++ L++ FQ++ A   V  C  +  +Q     ++ A A  W PVN+FF  ML TG +SL+  +VPMVTVFKN+TN+    G++ F+G+     A+ + A+M LGA+ AA NDI  +  G  WMV+NC  T+ YVLYMK AT+ ++L KFGMVF NN+L + +LL  A + GE   F+  E +HT  Y   + +AG +GFFLN A+L CVS    +TYA+VG+LNKIP+A+LG+L+F + I  K   F+S+S+CGGFLY+Y K++  + R
Sbjct:   53 AIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEVCRMMHWVQYPPLNWETARA--WAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFGSQPEGLAMAAFAVMFLGAVAAAQNDIHVTATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELATFLNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVAILGYLIFDSVIDSKTWFFISVSLCGGFLYSYAKIRSANQR 352          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GAX21877.1 (GDP-mannose transporter [Fistulifera solaris])

HSP 1 Score: 261.2 bits (666), Expect = 5.300e-66
Identity = 137/302 (45.36%), Postives = 198/302 (65.56%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQYK----ADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLR 383
            AI SC  Y+FCS++M+L NK+LAS Y      +++ L++ FQ++ A   V  C  +  +Q     ++ A A  W PVN+FF  ML TG +SL+  +VPMVTVFKN+TN+    G++ F+ +     A+ + A+M LGA+ AA NDI  +  G  WMV+NC  T+ YVLYMK AT+ ++L KFGMVF NN+L + +LL  A + GE   F+  E +HT  Y   + +AG +GFFLN A+L CVS    +TYA+VG+LNKIP+A+LG+L+F + I  K   F+S+S+CGGFLY+Y K++  + R
Sbjct:   53 AIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEICRMMHWVQYPPLNWETAKA--WAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFDSQPEGLAMAAFAVMFLGAVAAAQNDIHVTATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELATFLNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVAILGYLIFDSVIDSKTWFFISVSLCGGFLYSYAKIRSANQR 352          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: EJK45870.1 (hypothetical protein THAOC_35494, partial [Thalassiosira oceanica])

HSP 1 Score: 253.8 bits (647), Expect = 8.400e-64
Identity = 134/300 (44.67%), Postives = 192/300 (64.00%), Query Frame = 0
Query:   82 ASTAIMSCFAYTFCSITMVLANKALASQY----KADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLK 378
            AS ++++   Y+ CS+ MVL NK+LAS Y    + D++ L++ FQ++ AV  V     +G +      F+ + A  W PVNI F  ML TG  SL+H +VPMVTVFKN+TN+    G+   YGA V    + +  IM+ GA++AA N    +  G  WM++NC CT+GYVLY+K ATK+V+L KFGMVFYNN+L +  L     V G+   F+GT+ LHT  Y   + +AG VGFFLN A+L CV+    TTYA++G+LNK+P+A+ G+L+F   I+ +   F+S+S+ GG LYT  KL+
Sbjct:   88 ASKSLIASAMYSGCSVGMVLVNKSLASSYNHLIEGDLNILLVVFQAIAAVVCVESSKHMGWVD--YPAFNLSTARSWAPVNILFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTLGDCILYGASVDFLVLAAFGIMLAGAVMAARNSADVTQTGLFWMLANCLCTSGYVLYLKFATKSVKLSKFGMVFYNNVLCMLFLFPVTLVNGQLGKFLGTKALHTADYAVKNAFAGFVGFFLNFASLNCVAQTGPTTYAMLGSLNKVPIAIFGYLIFDNAISEETWTFISISLMGGILYTIAKLR 385          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: CBJ33733.1 (GDP-mannose transporter [Ectocarpus siliculosus])

HSP 1 Score: 252.7 bits (644), Expect = 1.900e-63
Identity = 143/305 (46.89%), Postives = 202/305 (66.23%), Query Frame = 0
Query:   83 STAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGE-FRI-------FIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGW-LMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            + AI SC A +F SI+M+LANK LA  + A + FL +AFQ   AV LV      G++Q     F+ A A++W P+ IFF +ML + FLS++++ VPMVTVFK+LTN+ I+ G+++++    +   +LS A+M  GA+LA+ +DI FS  GY WM +NC  TA YVL MK AT+T++LPKFGMVFYNNLL   I+L  A   GE F +       F+   DLHT +YLS+++ AG  GFFLN A LWCV   SATTYAVV  +N  P+++LG+ L+   PI+ +   F+ +++ GGF+Y+  K+KE
Sbjct:   86 ANAIASCTALSFFSISMILANKFLAGSFNAKLHFLPMAFQCFIAVLLVEASRMKGLVQ--YEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMGVPMVTVFKSLTNLIIVTGDYFWHSQIATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGCLIMLPLAMCFGEVFTLESTGLVGFLDRADLHTPTYLSINLGAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLLPSAPISRQQWEFIVVNIVGGFIYSAAKIKE 388          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_002176711.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51174.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 250.8 bits (639), Expect = 7.100e-63
Identity = 134/296 (45.27%), Postives = 191/296 (64.53%), Query Frame = 0
Query:   85 AIMSCFAYTFCSITMVLANKALASQY----KADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKL 377
            A+ +C  Y+FCS++M+L NK+LAS+Y      D++ L++ FQ+V AV  V  C   G ++     +  AVA  W PVNIFF  ML TG  SL+  +VPMVTVFKN+TN+    G++  +GA       ++  +M+ GA+ AA ND+  + +G  WM  NC  T GYVLYMK AT++V++ KFGMV+ NN+L +  LL  A   G+  +F  T DLHT+ Y   + +AG VGFFLN A+L CV     TTYA+VG+LNK+P+A+LG+ +F   IT +   F+ +SMCGGFLY++ K+
Sbjct:   15 AVTACTLYSFCSVSMILVNKSLASRYVPNDGCDLNVLLVVFQAVTAVVCVEICRKAGWVEYPPLTW--AVAKSWAPVNIFFCLMLFTGMASLQFNSVPMVTVFKNVTNILTTAGDYVCFGARPEGLVYVAFGVMLSGAVAAAWNDVEITLVGLFWMAMNCVATCGYVLYMKFATQSVKMSKFGMVYVNNVLCIVFLLPAAYALGQVDMFWNTPDLHTIDYGIKNFWAGFVGFFLNFASLNCVQTTGPTTYAIVGSLNKVPVAMLGFFLFDNVITPQTWFFIGVSMCGGFLYSFAKI 308          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_002288727.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94163.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 246.1 bits (627), Expect = 1.800e-61
Identity = 124/266 (46.62%), Postives = 178/266 (66.92%), Query Frame = 0
Query:  113 DIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379
            D++ L++ FQ++ AV  V    ++G +     KF+   A  W PVN+ F  ML TG  SL+H +VPMVTVFKN+TN+    G+   YGA + +  I +  IM+ GA++AA ND   +  G  WM++NC CT+GYVLY+K+ATK+V+L KFGMVFYNN+L    L     + GEF  F+ T+ LHT+ Y   + +AG VGFFLN A+L CV+    TTYA++G+LNKIP+A++G+L+F + I+ +   F+S+S+ GGFLYT  KL+E
Sbjct:    3 DLNILLVVFQAIAAVICVEFSKSMGWVD--YPKFNFRTAQLWAPVNLLFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTIGDCILYGASIEILVIAAFGIMLAGAVMAARNDADVTQTGLFWMLANCLCTSGYVLYLKYATKSVKLSKFGMVFYNNVLCSAFLFPVTVMNGEFSTFMNTKALHTVDYAVKNAFAGFVGFFLNFASLNCVAQTGPTTYAMIGSLNKIPIAIMGYLIFDSTISEETWTFISISLLGGFLYTIAKLRE 266          
BLAST of NO02G01920 vs. NCBI_GenBank
Match: EJK59623.1 (hypothetical protein THAOC_20121 [Thalassiosira oceanica])

HSP 1 Score: 221.9 bits (564), Expect = 3.500e-54
Identity = 126/297 (42.42%), Postives = 179/297 (60.27%), Query Frame = 0
Query:   82 ASTAIMSCFAYTFCSITMVLANKALASQYKA--DIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGA-LLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTK 376
            AS ++++   Y+ CS+ M+L NK LAS Y    D+  L++ FQ++ A+  V     +G +      F  + A  W PVN+ F  ML TG  SL+H +VPMVTVFKN+TN+    G+   YGA V    + +  IM+ GA ++AA+N    +  G  WMV+NC CT+GYVLY+K AT++VRL KFGMVFYNN+L +  L     V G+   F+G + LHT  Y   +  AG VGFFLN A+L C++    TTYA++G+LNK+P+A+  +L+F   I+ +    L     GG LYT  K
Sbjct:   48 ASKSLIASAMYSGCSVGMLLVNKNLASSYNGLKDLYILLVVFQAIAAMVCVEFSKHMGWVD--YPAFHLSTARSWAPVNVLFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTLGDCILYGARVDFPVLAAFGIMLAGAVMMAASNSAGVTQTGLFWMVANCLCTSGYVLYLKFATRSVRLSKFGMVFYNNVLCVLFLFPVTLVNGQLGKFLGKKALHTADYAVKNALAGFVGFFLNFASLKCIAQAGPTTYAMLGSLNKVPIAIFRYLIFDNVISGETWFIL----MGGILYTIAK 338          
The following BLAST results are available for this feature:
BLAST of NO02G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30446.14.500e-14273.91gdp-mannose transporter [Nannochloropsis gaditana][more]
CBN73911.11.300e-7248.82conserved unknown protein [Ectocarpus siliculosus][more]
OEU09349.11.300e-6745.42putative GDP-mannose transporter [Fragilariopsis c... [more]
GAX13784.18.100e-6745.70GDP-mannose transporter [Fistulifera solaris][more]
GAX21877.15.300e-6645.36GDP-mannose transporter [Fistulifera solaris][more]
EJK45870.18.400e-6444.67hypothetical protein THAOC_35494, partial [Thalass... [more]
CBJ33733.11.900e-6346.89GDP-mannose transporter [Ectocarpus siliculosus][more]
XP_002176711.17.100e-6345.27predicted protein, partial [Phaeodactylum tricornu... [more]
XP_002288727.11.800e-6146.62predicted protein, partial [Thalassiosira pseudona... [more]
EJK59623.13.500e-5442.42hypothetical protein THAOC_20121 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006852NSK006852Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01920.1NO02G01920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574093gene_776Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100100g9gene220Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01920.1NO02G01920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01920 ID=NO02G01920|Name=NO02G01920|organism=Nannochloropsis oceanica|type=gene|length=2031bp
GTCGGCATGGTACTTGGCCTTGCATCCCTGGACAAATCCAGCCATCGTTC
CCATTACTACACAAACCATTCCAGCTGTGGAAAAAGGAATGAGTTGGGGA
CCGTGGCACCCCGGATTAAAAATCGCTTTCTTACAAGCTCCTTGCGGCGA
TGGCGATGATCGTCACGATGTGATCGTGCAGCCGTGCCTGAAGAGCTGAA
CACACCCCTATTCCACTCTTCCCTTCCCGCACTTTCATGATCATTTGCGC
CAATACATAAAGCGCAGCCACGTGAGGATGAGAAATCGTTGACACTGCTT
AGCCAGCGCTAGACCCTGCTTGCTGTTTTAGGTCACTCTTCTAGTGTAGT
CCTCTCCGCTCCATTTACCACCCGCCGTTTCTCTCACAGAACCCAACCCA
CACTATACACAGTACTCACAACAACAGTAATCACGACCACCCGGGGACGA
AGGACGATATTCATGTCCTTGAAGGGCATTGGGGGCAGGGGCGGAAACTT
CTATGAAGGTCGGGATGGCACCGTCGCCGACGATGAGGAAATTAATCCCC
TAATGGTGGAGATGCGCCAAGCCAAGGGTCGGCTTGAAGGCAGCTCATCT
TTGTCCTCGACCACTCCATCGTCATCCTCCTCATCTCGTTCCTCCTCTTC
TGGGTCAGTCGCCACGTCCTACGCCGCGACAACCGTGACGAGCCTAGGCG
ACCCGGCCTCGACCGCCATCATGTCATGCTTCGCCTACACCTTTTGCTCC
ATCACAATGGTCCTGGCCAACAAGGCCCTCGCCTCGCAATACAAAGCTGA
CATTGATTTTCTCGTTATTGCCTTTCAAAGCGTTTGTGCCGTCGCCCTCG
TGGTGGGCTGCGATGCGGTCGGAGTCATTCAACCGGGCAGCACCAAATTC
GATCGCGCCGTGGCTGTTCAATGGCTCCCTGTCAACATCTTCTTCGTCAG
CATGCTTTCCACGGGCTTTCTCAGTCTCAAACACCTCAATGTGCCCATGG
TCACCGTCTTTAAGAACCTGACCAACGTGGGCATCATGTGGGGGGAGTGG
TATTTCTACGGGGCACACGTCTCCCTCGGTGCCATCTTATCTTGTGCCAT
CATGATCTTAGGCGCCCTCCTCGCCGCTGCCAACGACATCACGTTCTCCG
GCATAGGTTATATTTGGATGGTCTCCAATTGCTGTTGCACTGCCGGGTAC
GTTTTGTACATGAAGCATGCCACTAAAACGGTGCGTCTGCCCAAATTTGG
TATGGTCTTCTACAACAACCTCTTGTCATTGCCGATCCTGTTGGTAGGAG
CGGCGGTCCGAGGGGAATTTAGGATTTTTATTGGGACAGAAGACTTACAC
ACGATGTCATATTTGAGCTTGTCGATATATGCAGGATTGGTAGGCTTTTT
CCTGAACTTGGCGACGTTATGGTGTGTGAGTAATAATTCAGCCACGACCT
ATGCAGTGGTGGGAGCACTGAACAAAATACCCTTGGCGGTGTTGGGATGG
CTAATGTTTAAAACACCCATAACGCACAAAGCGTTGGTGTTTTTGTCCAT
GAGCATGTGTGGGGGCTTTTTGTATACCTACACTAAATTGAAGGAGGTGG
ATCTGCGACCAACTTTGCCGAGATGAGGGGTAGGGAGGAAGGGCAGGGAA
AATGTGGACATATTATCAGTTGGATTTAAAATAGAATGGTAAATAAAGAG
CAGAAATGTACGACAGCTGTTTGAAAGGTAGGTAGGCACTGTGTCGAGTT
TTGAACGAATGCGCGACAGTCTCTTTCCTGGTTCACTTTCAGCAGCTGTA
GTAGAAGCAGCAGCAGTAATAAAATCTGTGGATTAGCGCTAATAGGAATA
AAAACATCAAACGAAAGATTTTCCCTGTTGGGTGAAAAGAGAGTCTTTTG
CTGTCGCTGCCTCTGCAGAATTTCATGATTGCAGAAGTCGGAAATAAGAA
GATGATCAGCGGATACGCGAAGGAACAAGTAAAAAGAGAAAGAGGAAGAC
GAAAGAAAATTGAGATGGCTGGTGATGATGA
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protein sequence of NO02G01920.1

>NO02G01920.1-protein ID=NO02G01920.1-protein|Name=NO02G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MSLKGIGGRGGNFYEGRDGTVADDEEINPLMVEMRQAKGRLEGSSSLSST
TPSSSSSSRSSSSGSVATSYAATTVTSLGDPASTAIMSCFAYTFCSITMV
LANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAV
AVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYG
AHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYM
KHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSY
LSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFK
TPITHKALVFLSMSMCGGFLYTYTKLKEVDLRPTLPR*
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Synonyms
Publications