NO02G01910, NO02G01910 (gene) Nannochloropsis oceanica

Overview
NameNO02G01910
Unique NameNO02G01910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2190
Alignment locationchr2:547949..550138 -

Link to JBrowse

Properties
Property NameValue
DescriptionFucosyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:547949..550138 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019378GDP-Fuc_O-FucTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002287728.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95171.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 269.6 bits (688), Expect = 2.300e-68
Identity = 150/374 (40.11%), Postives = 220/374 (58.82%), Query Frame = 0
Query:  214 ERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLH-FSDF--FYLNRLREKMEMIEMKDFLEAE-----ATSGHLGPLPPG--NRTDLESGE--------------LWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKE---------QQERLDLFCGKREPVFYDKAMQEAKVIHFGSGE-DMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA----------GPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFS 544
            +++YVTFEPD GGWNNIRM+ME++ VFA ATGRTLV+PP+   YLL K       + H F+DF  F    L+  +EMI M++FL  E     ++ G L  LP G   +  ++S +              L+S+L  +G  P      + C+ F +    A E  S E         +++R+  FC  R P+F+   +  A ++HF +GE   R+L HFYTF  F D  +D   KRF+R+++HY D +FCAAG+II  +E  A             GF ALH+RRGD Q+K+VKI A + +  T DIL+ GE +YVATDEKD ++ + ++ ++N+ FL++F E  GL +L+ N+ GM++ IV SR +VF+GTWF+
Sbjct:  198 QKRYVTFEPDRGGWNNIRMSMEIIFVFAAATGRTLVLPPDTPFYLLGKEAEGKSTRHHGFADFLNFEHEGLKRNVEMITMEEFLRREGGVKGSSEGKLFMLPSGADGKKIVKSAKQCYYIAKSSTPCELLYSFLGSVGHVP-ELQAGRDCLIFDKQVMYAKETTSDEDIFIALPSDKRQRITEFCDNRNPIFFGSDLDSAPLVHFHAGEKHHRLLNHFYTFLLFTDTTIDHHFKRFIRDFLHYIDPIFCAAGKIIQLLEKDAAKQASSSEEYNAPGFSALHVRRGDFQYKKVKISAVDWLNITSDILHPGEVVYVATDEKDRSFFEPMQKQYNLRFLDEFSEAAGLYELDPNFAGMIDTIVASRGRVFVGTWFT 570          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002289731.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93268.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 269.2 bits (687), Expect = 3.000e-68
Identity = 177/493 (35.90%), Postives = 260/493 (52.74%), Query Frame = 0
Query:  173 ADHCGVS-----DIFYWQRYDEEILAAAAADGAAVEVKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFS--DFFYLNRL---REKMEMIEMKDFLEAEATSGHL-------GPLPPGNRTD---LESGELWSYLNGLGQGPVRWNPFKVCVAFTETPGKA-------VEEHSKEQQERLDLFCGK------------REPV--------FYDKAMQEAKVIHFGSGEDMRV--LAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA-------GPGG-FKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGY-------NGFD--YRSNWYHYSLRKDSFQTEYYS--RDPWYVREWPEGWVDID 598
            ADH G S     ++ YW     +            + K+P        KY+TFEPD GG+NNIRM++E +++ A+A GRTLVMPP QGMYLL K    D  K+HFS  DF+++ ++      +++I M++FL  EA +G+L          PP NRT+   ++  EL  YL  +   P+ W+P     AF    GK        +    ++   +++ F  K            RE V         YD+ MQ+A V+HF     MRV  L HFY F  F D   D   KRFVR+++ Y D++ CAA RI+A++   A        P G + + HIRRGD Q+K  ++ A+EI E +KD +  G T++VATD     +   L  ++++ FL+DF +   L  +N NY GM++Q+V SR +VF G + STFTG+I R+RGY       +GF+     N Y+YS + +    E+Y   + P+Y RE+P  W DID
Sbjct:  146 ADHGGPSNDLAAEMVYWSDIPSD-----------ADFKSPIGANDKSIKYLTFEPDGGGFNNIRMSLETIILMAHAMGRTLVMPPSQGMYLLRKD--RDKQKVHFSFDDFYHMEQVGFEHAGLDIISMEEFLLKEAMTGNLKNKTTGVASYPPNNRTNWDGMDPKELKEYLRDVTLTPLDWSPGSCLAAFPSDDGKQHFDELNDMMHEVQQNMPKVNDFVDKPVAVDAPPVDRMREAVAGQIKRLCIYDEEMQKAPVVHFMCYHKMRVRLLTHFYAFLFFEDWRHDLWSKRFVRDHLRYSDDIQCAAARIVASVRERARKRDPTGNPNGEYDSFHIRRGDFQYKNTRLEADEIYENSKDEMKPGGTVFVATDHNGKPFFKPLADKYDLVFLSDFKKE--LEGVNTNYYGMIDQLVASRGRVFFGCYHSTFTGFIFRIRGYHSQKEKTDGFEAGLLHNSYYYSGKGEKNMYEHYGAVKAPFYSREFPTSWRDID 623          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: OEU17320.1 (hypothetical protein FRACYDRAFT_183989 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 268.1 bits (684), Expect = 6.600e-68
Identity = 165/451 (36.59%), Postives = 241/451 (53.44%), Query Frame = 0
Query:  210 KLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRL---REKMEMIEMKDFLEAEATSGHL-------GPLPPGNRTDLESGE------LWSYLNGLGQGPVRWNPFKVCVAFTETPGK---------AVEEHSKEQ------------------QERL-DLFCGKREPVFYDKAMQEAKVIHF--GSGEDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAME------TAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGF-----DYRS----NWYHYSLRKDSFQTEYYS--RDPWYVREWPEGWVDID 598
            K   +R+Y+TFEPD GGWNNIRMAME  +  + A GRTLVMPP++ MYLL K +    +   F DFF +  +       E++ MK++LE E   G L          PPGNRT+ +  +      L  YL  +    +RW P K   AF  + GK          V+E  K++                   ERL D   G+++   YD+++Q+ KV+HF     E +R+L HFY F  F D   D  +KRFVR+++HY+DE+ CA  RI+ +++      T      F   HIRRGD QFK+ ++  + II+ TK  L  G TI++ATDE D  +   +   +++ FL+DF +   L  +N NY GM++Q+V SR ++F G W+STFTGYI RMRGY+        Y++      ++Y  +   F+   Y+  R  ++ RE+P  W DID
Sbjct:   44 KQNEQREYLTFEPDGGGWNNIRMAMESTIALSVAMGRTLVMPPQKKMYLLGKNNGGQRHHFSFVDFFPIEEMAKDNNAFEVVSMKEYLEEEGMKGKLINQETGQVEFPPGNRTEWDGIDQADYDLLRGYLRNV-SNTLRWEPGKCLPAFPSS-GKHQDVEILQGLVQELQKKKTNKKTDDTSLFQVDNPDPTERLEDTLAGRKKLCVYDESIQKEKVVHFQCNHKEHLRLLVHFYAFLFFEDWREDLWMKRFVRDHLHYQDEIQCAGARIVHSIKQHVMKRTNGKTTEFDTFHIRRGDFQFKDTRVDIQTIIDNTKAELTPGSTIFIATDEHDRNFFKPMGEIYDLLFLDDFKKE--LEGVNSNYYGMIDQLVASRGRIFFGCWWSTFTGYINRMRGYHSTKDMAPGYKNGELPKTFYYITKDRKFEMHKYAPLRGGFFSREYPTSWRDID 490          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002291988.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90839.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 263.8 bits (673), Expect = 1.300e-66
Identity = 158/443 (35.67%), Postives = 233/443 (52.60%), Query Frame = 0
Query:  205 KNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRL---REKMEMIEMKDFLEAEATSGHLGPLPPG-----NRTDLESGELWSYLNGLGQGPVRWNPFKVCVAFTET-------------------------------PGKAVEEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGEDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAM-ETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYR-SNW-------YHYSLRKDSFQTEYYS--RDPWYVREWPEGWVDID 598
            K+P+   G E K++TFEPDHGGWNNIRMAME  LV ++A GRTLV+PPEQ  YLL K D    N   F DFF+L+ +    E   +I  ++FL+    +G L  +  G     +     S  + SYL  +G  PV WNP     AF  T                                GK V+  +  ++   +L   + E   YD+ +Q+A+V+HF + +  R+L HFY F  F D   D   KRFVR+++ Y DE+ CAA R++ A+ E +   G F ++H+RRGD Q+K+ ++ A E+I  +KD L EG  +Y+ATDE++  + +  R  + V FL+DF     L  +N N+ GM++Q++ S+ +VF         GY+ RMRGY    ++   W       Y++     S Q + Y   + P Y+RE+P  W DID
Sbjct:  143 KSPFMIEG-EEKFLTFEPDHGGWNNIRMAMETALVMSHAMGRTLVLPPEQRFYLLGKSDQQQKNDFDFGDFFHLDSIAIEHENFNVISSEEFLQRFGKTGKLNNVQTGKPEIWDEKQHSSSNVQSYLRKVGLNPV-WNPTNCIAAFPSTTGPESVAELRLAHKDIFSEANGRKRPSLEEFEGKPVDVDAPMEERMRELMADRDELCVYDERLQKAQVLHFPAEKGTRLLTHFYAFIFFADWKADLWSKRFVRDHLRYIDEIMCAAARVVKAVRERSKDNGLFDSMHVRRGDFQYKKTRLEANELIAKSKDNLIEGGLLYIATDERNKDFFEPFREHYEVIFLDDFKHL--LTGINTNFYGMLDQLIASKGRVFY--------GYVNRMRGYYVSKHKLKGWKDGTMESYYFFPDDKSNQMKTYQPVKKPIYMREFPTSWRDID 573          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: OEU17652.1 (hypothetical protein FRACYDRAFT_275162 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 258.8 bits (660), Expect = 4.000e-65
Identity = 155/451 (34.37%), Postives = 231/451 (51.22%), Query Frame = 0
Query:  206 NPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRL---REKMEMIEMKDFLEAEATSGHLG-----PLPPGNRTDLE-----SGELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQERLDL----------FCGKREPV-------------------FYDKAMQEAKVIHF--GSGEDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRII-----AAMETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRS--------NWYHY--SLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            +P+A  G   KY+TFEPD GGWNNIRM+ME     A+A GR LV+P EQ MYLL +    ++N+  F +FF  + +    + +E+I M++F++ E   G++        PP N+TD E         W +L  +      W+  K    F + PGK   +  ++  E +D+          +  K  PV                    Y+  MQ++KV+HF   +    R+L HFY F  F D   D   KR+VR+++ Y DE+ CAA +I+      A+E     G + ++H+RRGD Q+   +IPA EI E  +DI  E  T+++ATDE++  + + L+  + V FL+DF   V    LN+NY G ++Q + SR + F G + STFTGYITRMRGY+    +         N Y Y     K+     Y  + P + RE+P  W DID
Sbjct:  105 SPYANYGESPKYLTFEPDEGGWNNIRMSMETATALAHAMGRILVLPFEQNMYLLKQDKKKENNRFTFKNFFPFDEISAEHKGVEVITMEEFMQREVMPGNIQKDGKVQFPPSNQTDWEGHIRDGKAFWHWLRNVTLAST-WDFSKCTAVFPKEPGKKAADEMEKLYETMDMSEQSHGIFKKYINKPTPVNGTVTDRLKEMLSFRKEICLYNDQMQKSKVMHFMGDNNSGARLLVHFYAFLFFEDWEQDLWTKRYVRDHLRYIDEIQCAAAKIVHAVRQKAIENGNPDGLYDSMHVRRGDFQYAHTRIPATEIYENIQDIFVENATVFIATDERNKTFFEPLQKHYQVLFLDDFLHLV--PDLNKNYYGHLDQRIASRGRTFAGAYLSTFTGYITRMRGYHSQKEKQPGYKKGKLNSYFYVGKENKEELSNYYSLKGPLWGREFPVAWRDID 552          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: GAX17331.1 (hypothetical protein FisN_10Lh196 [Fistulifera solaris])

HSP 1 Score: 257.7 bits (657), Expect = 9.000e-65
Identity = 163/450 (36.22%), Postives = 229/450 (50.89%), Query Frame = 0
Query:  215 RKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLN---RLREKMEMIEMKDFLEAEATSGHLG-------PLPPGNRTDLESGELWSY---LNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQER----------------------------LDLFCGKREPVFYDKAMQEAKVIHFGSGEDMRV--LAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAM-------------ETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRS---------NWYHYSLRKDSFQTEYYSR--DPWYVREWPEGWVDID 598
            RKY+TFEPD GGWNNIRMAME VL  A A GRTLV+PPEQ MYLL K    +     F+DFF ++   R  + + MI  + FL   A +G L          PPGNRT+    ++  Y   L  +   P+ W+P + C+A     G A + H  +  +R                             +    ++E   YD+ MQ   V+HF     MRV  L HFY F +F D   D  +KRF+R+++ Y DE+ CAA RI+ AM                 G G F   HIRRGD Q+K  +I A EI E  +  +    TIY+ATDE+D  +   L+  ++V FL+DF +   L  +N N+ GM++Q+V SR ++F G W STFTG+I R+RGY+  ++R            Y+Y  R++      Y+R    ++ RE+P  W D+D
Sbjct:  144 RKYMTFEPDGGGWNNIRMAMETVLGLAIAMGRTLVLPPEQRMYLLAKNRGQEKTDFSFADFFPMHDLARENDGLHMITTEQFLNEVAMTGQLRDKNTGEISFPPGNRTNWNGQDVKLYKEWLRNVTHTPL-WSPTQ-CMAAFPASGNAEDAHILQDMQRRIHKESLTMRDIILDPPPAVDSSPLDRMRENLADRKELCVYDEEMQGELVVHFMCYHKMRVRMLVHFYAFLYFEDWREDLWMKRFMRDHVRYIDEIQCAAARIVHAMREYDKSRREDFPGHQMIGTGEFDTFHIRRGDFQYKRTRIEASEIYENVRQYIALNATIYIATDERDKTFFSDLKKHYDVKFLDDFVDE--LKGVNTNFYGMIDQLVASRGRLFFGCWHSTFTGFIHRLRGYHSTNHREPGYEDGLLPTSYYYVPRENIDAMHKYARLHGAYFNREFPTSWRDLD 589          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002290318.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92070.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 256.5 bits (654), Expect = 2.000e-64
Identity = 159/440 (36.14%), Postives = 224/440 (50.91%), Query Frame = 0
Query:  215 RKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYL---NRLREKMEMIEMKDFLEAEATSGHLGPLPPGNRT------------------DLESGELWSYL--NGLGQGPVRWNPFKVCVAFTETPGKAVEEH----SKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGE-DMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAM-------ETAAG------------PGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFN--VYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPW--------YVREWPEGWVDID 598
            ++Y+TFEPD GGWNN+RM+ E ++V A  +GRTLV+PP+Q +YLL           +++D F L   N L  ++ +I  ++FL  E  +  L P+   N T                  D+   +L+ +   +GL        P + C  F        EE     S + Q R+  FCG R  V+Y KAM +A + HF + +   R+L H+Y    F DP +    KR VR+Y+ Y DEVFCAAG+I+ A+       +  AG             GG+ ALHIRRGDLQFKEVK  A+E  E TK++    E +Y+ATDE    + D  R   +  + F +D+HE   L  ++    GM++ ++ SR  +F GTWFSTF+GYI R+RGY G    S +Y Y  RK       Y    W        Y RE+P GW  ID
Sbjct:  248 KRYLTFEPDTGGWNNLRMSFENIIVLAAMSGRTLVLPPDQIIYLLEPRKGDTRRGRNYNDIFNLTDNNELLRRVPIITAEEFLAIEGGNDGLIPIDKYNSTYQKHLLDITKECEERKKSDVFCEDLYDHYRDHGLLADISAEPPHEQCFIFDIDVFNHGEEFITKLSSDVQHRVKKFCGVRPAVYYSKAMHDAPLWHFETMDLRYRMLVHYYAQIFFTDPEIGNYYKRLVRDYLRYHDEVFCAAGKIMLALQYESYERDLVAGVKRSTLDLDSELVGGYSALHIRRGDLQFKEVKFSAKEWYENTKELWKRDEVLYIATDENFKPWFDDFRQSHSGQLRFFSDYHELADLDSIDPTLYGMIDTLIASRGTIFAGTWFSTFSGYIVRLRGYYGMSKFSTYYSYLERK-------YFMHSWMNVGEGSLYAREYPTGWTGID 680          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002287740.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95183.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 256.5 bits (654), Expect = 2.000e-64
Identity = 140/419 (33.41%), Postives = 227/419 (54.18%), Query Frame = 0
Query:  216 KYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPD----DNKLHFSDFFYLN-----RLREKMEMIEMKDFLEAEATSGHLGPLPPGN-----------------RTDLESGELWSYLNGLGQGPVRWNPFKVCVAFTETP---GKAVEEHSKE-----QQERLDLFCGKREPVFYDKAMQEAKVIHFGSG-EDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYY--SRDPWYVREWPEGWVDID 598
            +Y++FEPD GGWNNIRM  E+++VFA ATGRTL++PP+  +YLL K          N   +   ++ N        + ++ I M +F + E       PLP                    +++     L+ +L  +      W   + C+   +      K V E +       Q++++  FC KR P++YD+ +  A+ IHF S  +D R+L HFY F HF +  +    KR VR+ + Y DE+FCA G+I+ A+   +   G+ ++HIRRGD Q+ +++I AEE +E T+ I   GE IY+ATDE +  + + L   + + FL D++E  GL  L+ N++GM++Q+V S+ + F+GT+FS+F+ +I RMRGY+G+  R    HY   +   +T ++      +  RE+P G+  ID
Sbjct:  180 RYLSFEPDCGGWNNIRMEFEIMVVFAAATGRTLILPPDHPLYLLRKDKIAKHRGLQNFFQYGGGYHANGRGNGGFDDIVDTITMDEFFQKEIVEKKSYPLPTDGTNLTKVMNSLHKCDYRLKSEKSCIYLFDHLANIADYVPNWMGERNCLIMDDEQWFRDKNVSESTPSLQRQLQRKKMRQFCDKRIPIYYDREVHNARFIHFRSHLKDTRLLVHFYAFLHFTNERISNYHKRLVRDRVRYADEIFCAGGKIVKALLRESNNAGYSSMHIRRGDFQWPKMRISAEEWVENTRHIFQPGEIIYIATDETNRTFFEPLEMHYRLRFLTDYNEYAGLDGLDPNFVGMIDQVVASKGRQFVGTYFSSFSAFIGRMRGYHGYSGRD--MHYGQLEYQNETHHWVLPHSSYSAREFPVGYTQID 596          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002291975.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90826.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 253.8 bits (647), Expect = 1.300e-63
Identity = 158/458 (34.50%), Postives = 235/458 (51.31%), Query Frame = 0
Query:  206 NPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRL---REKMEMIEMKDFLEAEATSGHLG-------PLPPGNRTDLE-----SGELWSYLNGLGQGPVRWNPFKVCVAF-TETPGKAVEEHSKEQQERLDLFCGKREPV------------------------------FYDKAMQEAKVIHFGSGEDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA----------GPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGY-------NGFD---YRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            +P        KY+TFEPDHGGWNNIRMAME  LV ++A GRTLV+P EQGMYLL+K D        F+DFF+L+ +    +  ++I M++FL  E  +G L          PP N+TD       +G L+ YL  +   P  W P+   +A  + T  KAV+E +      +D   GK++P                                YDK +QEA VIH      +R+L HFY F  F D   D   KRFVR+++ Y D++ CAA R++ A+   A            G +  +H+RRGD Q+  V +PAE++ + +K+ L+E  T+Y+ATDE++  + +  +  ++V FL+DF   +    +N NY GM++Q+V  +S+VF         GY+ RMRGY        G++    +S ++  + RK   +T    R P Y +E+   W DID
Sbjct:  233 SPMYDANAPEKYLTFEPDHGGWNNIRMAMETALVMSHAMGRTLVLPAEQGMYLLSKSDREQKRHFGFNDFFHLDSIALEHKGFKVITMEEFLTREGVTGRLRNKDTNQIMYPPHNQTDYNGADTGTGNLFQYLRQIAVTPT-WEPWDCALAIPSSTDQKAVDELNNTLHSIMDGSYGKKKPTLEEFNGHPTPVNASMAERMREMLADREQLCIYDKPLQEANVIHLKVHAGVRLLTHFYAFIFFADWKQDLWSKRFVRDHLRYVDDIVCAAARVVEAVRQHARKNVNYKASNEEGIYDGMHVRRGDFQYPPVLLPAEQLYDLSKEELSENATLYIATDERNKTWFEPFKKHYDVVFLDDFLHVI--PDVNTNYYGMIDQLVSYKSRVFY--------GYVNRMRGYYIAKHKREGWEDGTMQSYYFTPAERKLQMRTYIPVRKPIYCKEFAVAWRDID 679          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: GAX18598.1 (hypothetical protein FisN_10Hh195 [Fistulifera solaris])

HSP 1 Score: 253.8 bits (647), Expect = 1.300e-63
Identity = 160/444 (36.04%), Postives = 231/444 (52.03%), Query Frame = 0
Query:  216 KYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLN-KGDAPDDNKLHFS--DFFYLNRLREK---MEMIEMKDFLEAEATSGHL-------GPLPPGNRTD------LESGELWSYLNGLGQGPVRWNPFKVCVAF-----TETPGKAVEEHSKEQQERLDLFCGKREPV-------------------FYDKAMQEAKVIHFGSGEDM--RVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAM-------ETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYN-------GFDYR-SNWYHYSL--RKDSFQTEYYSRDPWYVREWPEGWVDID 598
            +++TFEPD+GGWNNIRMAME VL  A+A GRTLV+PPE+  YLL  K       + HFS   FF +  + E+   + +I M +FL      G            PPGNRT+       E  EL+ +L  +      WNP K   AF      +T  + +E   K      + +     PV                    YD  MQ + ++HF     +  R+L HFY F    D   D   KRF+R+++ Y D + CAA R++ A+       E++ G G F + HIRRGD Q+K+ ++ A +I++  +  + +G T+Y+ATDE+D +Y   L   F+V FL+DF +   L  +N NY GM++Q+V SR +VF G WFSTF+ YI R+RGY+       G+D+  SN ++Y L  R D  Q  Y  +  +Y RE+P  W  ID
Sbjct:  110 QFLTFEPDNGGWNNIRMAMETVLALAFAMGRTLVLPPEKEFYLLTAKHHQGQQQRKHFSFAHFFNMRAIHEEHAGLSIISMSEFLSEHVMKGQFVDRATGQATFPPGNRTEWDGVPPAEMDELFRWLRKVAH-VAPWNPEKCLAAFPTERDNDTNLRELELKMKNNPPHWEDYVDNPVPVDAPAVDRLAENWAERDSLCIYDTEMQHSPLVHFSGDHKLGARLLVHFYAFLFMEDWKQDLWGKRFIRDHVRYIDSIQCAAARVVQAIRHRVRSKESSEG-GEFDSFHIRRGDFQYKKTRVEASQILQQAQKKIKDGATVYIATDERDKSYFKPLMEHFDVVFLDDFMDE--LQGINSNYFGMIDQLVASRGRVFFGCWFSTFSSYIMRLRGYHENKRKLPGYDHGISNSWYYVLEDRFDHMQHYYPVKKVFYAREFPTSWRLID 549          
The following BLAST results are available for this feature:
BLAST of NO02G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002287728.12.300e-6840.11predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002289731.13.000e-6835.90predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU17320.16.600e-6836.59hypothetical protein FRACYDRAFT_183989 [Fragilario... [more]
XP_002291988.11.300e-6635.67predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU17652.14.000e-6534.37hypothetical protein FRACYDRAFT_275162 [Fragilario... [more]
GAX17331.19.000e-6536.22hypothetical protein FisN_10Lh196 [Fistulifera sol... [more]
XP_002290318.12.000e-6436.14predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002287740.12.000e-6433.41predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002291975.11.300e-6334.50predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX18598.11.300e-6336.04hypothetical protein FisN_10Hh195 [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006853NSK006853Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01910.1NO02G01910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|522717gene_775Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100100g8gene221Nannochloropsis gaditana (N. gaditana B-31)gene
Naga_100013g21gene187Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01910.1NO02G01910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01910 ID=NO02G01910|Name=NO02G01910|organism=Nannochloropsis oceanica|type=gene|length=2190bp
ACAGCCGCCGCCACAATGCGACGTCGGCCTGTCGAGGATGATGACACCAG
CGATCATTCAGAAGGCTCAGCAGATTTTCCCGATGCCTCAGGTGCGGGCT
CAGACTTCGAGGACAGCTCTCTCTCTAGCAGCCTGCGGAAAGAAGCAGCT
GAGAGCTGGCCCAACTGCGTTGGGCGTGGCGCATGGGTCCTGACCTTCTT
GCTCCTGGTCGCGGGTGTGGTGGGCTTTAGCATGGTAGCCTTTTCTCAAG
GTCTATTGGAGCCGGTAGGGCAGCACAGCCCTTTGGCGACCTTACGGGGT
GCGACTAACTCAAAGAGCTTGGCCCCCGCGGAGCTGCGCGTGGCTGCAAG
CCGCAACAGCGCGAATGATAACGCAGCAGCACCATCCTTACCATCTGACA
ATGCCGAAAAGAAGAAAAAGACTAAGAAAAAGGATATATTCAATAGCGTG
GAGGCCGTCGACAAGGTGTGGGTGGATGAGGAGGAAAATCCCTTTGACAA
GGACTGGGAGACGTTCCCCCCCTCCGAGCTCGCGGACCACTGCGGTGTCT
CGGATATTTTCTACTGGCAGCGTTACGATGAAGAGATCTTGGCTGCTGCC
GCCGCAGACGGGGCGGCGGTGGAGGTGAAGAACCCTTGGGCAAAGTTGGG
ACCGGAGAGGAAGTATGTGACGTTTGAGCCGGACCATGGGGGGTGGAATA
ACATCCGAATGGCTATGGAGGTCGTCTTAGTTTTCGCTTATGCTACTGGA
CGAACGTTGGTAATGCCACCGGAGCAAGGAATGTATCTATTGAACAAGGG
CGATGCCCCCGACGACAATAAGTTACACTTTTCTGACTTCTTTTACTTGA
ACCGGCTGCGGGAGAAGATGGAGATGATCGAAATGAAGGACTTCTTGGAG
GCAGAGGCCACGTCAGGCCATCTTGGACCGCTTCCCCCTGGTAATCGCAC
GGACCTGGAAAGTGGCGAGCTATGGAGTTATTTGAATGGTCTGGGACAGG
GGCCAGTGCGCTGGAACCCTTTCAAGGTGTGTGTGGCTTTTACTGAGACT
CCGGGCAAGGCCGTAGAGGAGCATTCGAAGGAGCAGCAGGAGAGGTTGGA
CTTGTTTTGTGGGAAGCGAGAGCCAGTATTTTATGATAAGGCGATGCAGG
AGGCCAAGGTGATTCATTTCGGGTCGGGCGAGGACATGCGTGTGTTGGCG
CATTTTTACACTTTCGAGCACTTCATGGACCCGGCTTTGGATAAGGCGGT
GAAACGATTTGTCAGgtatgactgtatggacagagggacagaagaagagg
gtgattataaaggtttgtgggatagatgctttgtattgaattgaatggaa
cgtccccggacttgacagctgcacgccctcctcctgtgtgtgcattctct
ttttttccgtcctccctccctccaataggacacctttcacacgacccaca
cataaacatatgttgccactttctttatgtgttcccctttaccatacagA
AACTACATACATTACCGCGACGAGGTCTTTTGCGCGGCCGGCCGGATCAT
TGCGGCAATGGAGACAGCTGCTGGCCCCGGGGGATTCAAAGCCCTCCACA
TTCGCCGGGGAGACTTGCAATTTAAGGAGGTCAAGATCCCTGCAGAAGAG
ATCATTGAGACCACCAAGGATATTTTGAATGAGGGGGAGACGATTTACGT
TGCCACGGACGAGAAGGACGCGGCTTATTTGGATGTGCTAAGGGCGCGAT
TTAATGTGTATTTTTTGAATGATTTCCACGAGAGGGTGGGTTTGGGGAAG
CTAAATCAGAATTATATGGGCATGGTGGAGCAGATTGTGTGCTCGCGGTC
GCAGGTCTTCATTGGGACGTGGTTCTCGACGTTCACGGGGTATATTACCC
GGATGCGCGGGTACAATGGGTTTGATTATCGCTCGAATTGGTATCATTAT
AGTCTGCGGAAAGACTCGTTTCAGACGGAGTACTACTCACGGGACCCCTG
GTATGTCCGTGAATGGCCGGAAGGATGGGTGGATATTGATTAATCGGAGA
CATGATTAGGAATGGAGGGCGGTGGGGAGGAGGATAGAGGAAGAAGGAGG
ATGCAGGGAAAGTATGCATGCATGTAAACCAAGGGAAAAAGAGGGAACAC
AAGAAAAAGAAAAAATAAGTCGACAATAGAATCAAGAAGC
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protein sequence of NO02G01910.1

>NO02G01910.1-protein ID=NO02G01910.1-protein|Name=NO02G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=598bp
MRRRPVEDDDTSDHSEGSADFPDASGAGSDFEDSSLSSSLRKEAAESWPN
CVGRGAWVLTFLLLVAGVVGFSMVAFSQGLLEPVGQHSPLATLRGATNSK
SLAPAELRVAASRNSANDNAAAPSLPSDNAEKKKKTKKKDIFNSVEAVDK
VWVDEEENPFDKDWETFPPSELADHCGVSDIFYWQRYDEEILAAAAADGA
AVEVKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVM
PPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREKMEMIEMKDFLEAEATS
GHLGPLPPGNRTDLESGELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAV
EEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGEDMRVLAHFYTF
EHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAAGPGGFKALH
IRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRAR
FNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYIT
RMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID*
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Synonyms
Publications