NO02G01880, NO02G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01880 vs. NCBI_GenBank
Match: EWM30520.1 (metallo-beta-lactamase family protein [Nannochloropsis gaditana]) HSP 1 Score: 514.2 bits (1323), Expect = 3.600e-142 Identity = 249/338 (73.67%), Postives = 276/338 (81.66%), Query Frame = 0 Query: 64 TTMRAHNKEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDAKERLLTEAADRFSELGRVGGLSM 402 T MRA KEE GNA +ANLYVDRSC+GCGTCRS+CPGVFG LGL++VVER+PLD+ ETRAAYRAMVTCP+GAIRLRKPDPLVKEVV HDFPTPLDPVALPGV+ LGYHNRESMG TPYLIVR+ G GNIMIDAPRFNGRLA QIE+LGG+RY IVTHEG+APHHDLWHAFFP+SERVVHRMDVTREM+GQVEA+LQGKGPW IDDD+KIVALPGYS G++GV LFSGRT+GWS RLNRLDGFAQFSRGSL KQA SIK L KEDF WILP+EGLK+ LP GG + +ERLL EAA+ F GRVGGL++ Sbjct: 52 TLMRARAKEESLGNAVDANLYVDRSCSGCGTCRSICPGVFGDLGLQSVVEREPLDKNETRAAYRAMVTCPMGAIRLRKPDPLVKEVVMHDFPTPLDPVALPGVYFLGYHNRESMGVTPYLIVRDNGEGNIMIDAPRFNGRLAQQIESLGGVRYMIVTHEGSAPHHDLWHAFFPSSERVVHRMDVTREMRGQVEAILQGKGPWRIDDDVKIVALPGYSPGSIGV--LFHPSSVSSNGIEEDSKWGKDGERNGILFSGRTLGWSARLNRLDGFAQFSRGSLRKQAASIKGLGKEDFAWILPAEGLKFHLPGGGNAETRERLLAEAAELFLARGRVGGLNV 387
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_005856207.1 (metallo-beta-lactamase family protein, partial [Nannochloropsis gaditana CCMP526] >EKU20157.1 metallo-beta-lactamase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 395.6 bits (1015), Expect = 1.900e-106 Identity = 211/350 (60.29%), Postives = 236/350 (67.43%), Query Frame = 0 Query: 64 TTMRAHNKEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLD----------GF--AQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDAKERLLTEAADRFSELGRVGGLSM 402 T MRA KEE GNA +ANLYVDRSC+GCGTCRS+CPGVFG LGL++VVER+PLD+ ETRAAYRAMVTCP+GAIRLRKPDPLVKEVV HDFPTPLDPVALPGV+ LGYHNRESMG TPYLIVR+ G GNIMIDAPRFNGRLA QIE+LGG+RY IVTHEG+APHHDLWHAFFP+SERVVHRMDVTREM+GQ KG Y + G W P L R D G+ A FSR L + A SIK L KEDF WILP+EGLK+ LP GG + +ERLL EAA+ F GRVGGL++ Sbjct: 54 TLMRARAKEESLGNAVDANLYVDRSCSGCGTCRSICPGVFGDLGLQSVVEREPLDKNETRAAYRAMVTCPMGAIRLRKPDPLVKEVVMHDFPTPLDPVALPGVYFLGYHNRESMGVTPYLIVRDNGEGNIMIDAPRFNGRLAQQIESLGGVRYMIVTHEGSAPHHDLWHAFFPSSERVVHRMDVTREMRGQGGGYPSRKGTL------------AYRRRREDRGAPRLLSWLYRRPFPSLVSEQQWNRGGFEMGKGWRAKWHP-LQRADPGVVCPLESLGWLRAIFSR-KLEETAASIKGLGKEDFAWILPAEGLKFHLPGGGNAETRERLLAEAAELFLARGRVGGLNV 389
BLAST of NO02G01880 vs. NCBI_GenBank
Match: GAQ88104.1 (metallo-beta-lactamase family protein [Klebsormidium nitens]) HSP 1 Score: 183.7 bits (465), Expect = 1.100e-42 Identity = 103/307 (33.55%), Postives = 155/307 (50.49%), Query Frame = 0 Query: 80 EANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRL-PEGGRKDAKERLLTE 386 E + +VD +C C TCR + P F L ++ V R+P E A +A++ CP +IR P +K+ + FP +DP LPGV+ GYH+ S G T Y + R GNI+ID+PRF LA +IE +GG+RY +TH+ H W A F ER++H DV R VE L+G GPW +D++++++ PG++AG V + LF+G + +S R L F + S+ KQ +S++ L DF W+LP G +Y E R++ E L+ + Sbjct: 105 EGDFFVDHTCIDCDTCRWMAPETFSHLNGQSAVHRQPQTPDERTRALQALLACPTASIRTETPPKDIKD-AQNTFPLAIDPETLPGVYHSGYHSENSYGATSYFVHRP-ERGNILIDSPRFTEVLAKRIEQMGGVRYMFLTHQDDVADHAKWAARF-GCERIIHEDDV-RSSTRDVERKLEGSGPWTLDEEVELIHTPGHTAGCVSL----------------------FYKPHKALFTGDHLAYSRRQEGLSIFRGVNWYSVSKQIDSVRKLIPLDFLWLLPGHGRRYHFESEADRREKLEELVAQ 385
BLAST of NO02G01880 vs. NCBI_GenBank
Match: CBJ29809.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 180.6 bits (457), Expect = 9.400e-42 Identity = 115/359 (32.03%), Postives = 166/359 (46.24%), Query Frame = 0 Query: 82 NLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDD----------------------------------------IKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLK--YRLPEGGRKDAKERLLTEAADRFSELGRVGG 399 + +VD SC C C + P F GL VV +P E + A++AM+ CP G+IR+ + D V + + FP P+D LPG++ LG RESMG TPYLIVR G GNIMID PR+ + A Q+ ALG ++Y IVT A H+ W FP R++HR+D+ R+ + +E L GKGPW++ +D +KIV +PG + G++GV F+G T+G S +LD F + A S++ L+KE W++P G + YR + G+ D L +AA R L + G Sbjct: 16 DFFVDESCVDCDICCWMDPRTFKRSGLGAVVASQPKSEEDRMRAFQAMLACPAGSIRVMRGDRQVIKAL-ESFPLPVDEERLPGIYQLGPTTRESMGNTPYLIVRP-GKGNIMIDVPRYLEQTADQVAALGDVKYMIVTARDNADGHERWKKKFPGMIRILHRLDLVRKTR-IMEERLDGKGPWYLVEDGFESPEDGYVTGDTGKGHNLLPRFDFFEVADEDCAPHDPTVKIVGIPGQTRGSIGVIVEWGKRKRGGKERLG--------------FTGGTVGMSVEKEKLDTFTRTLETDRATLASSVRLLSKEGITWLMPGRGARVMYRTRKEGKAD-----LEKAAGRTEALPNLAG 352
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_016723347.1 (PREDICTED: uncharacterized protein LOC107935280 [Gossypium hirsutum]) HSP 1 Score: 175.3 bits (443), Expect = 3.900e-40 Identity = 100/313 (31.95%), Postives = 158/313 (50.48%), Query Frame = 0 Query: 80 EANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKD-AKERLLTEAADRFS 392 + + +VD +C CGTCR + P VF +G + V ++P + A +A+++CP +IR P P + E FP P+D LPGV+ GYH+ +S G YLI+ G GNI+ID+PRF +LA +IE +GG+RY +TH+ H W F T +R++H DV VE L+G GPW + DDI +V PG++ G V LF+G + + + L +++ S+ KQ +S++ L + DF+WI+P G + + K+ E + E +++S Sbjct: 68 DGDFFVDHTCIDCGTCRWMAPQVFTRVGEMSAVYKQPTSSEDRLKALQALLSCPTSSIRTEVPPPDILE-AQKTFPIPVDEKKLPGVYHCGYHSEKSYGAASYLIIHPG--GNILIDSPRFTKKLAKEIETMGGVRYLFLTHKDDVADHAKWATPF-TCDRILHSEDV-EICTADVEMKLEGNGPWSLGDDIMLVHAPGHTEGTV----------------------CLLYKPLKILFTGDHLMMTE--SGLSIMEMYNKYSVPKQVDSVQKLIQFDFDWIIPGHGWRIEFKDFQEKNTVLEAFVREKYNQYS 351
BLAST of NO02G01880 vs. NCBI_GenBank
Match: KJB78820.1 (hypothetical protein B456_013G020800 [Gossypium raimondii]) HSP 1 Score: 174.9 bits (442), Expect = 5.100e-40 Identity = 103/308 (33.44%), Postives = 155/308 (50.32%), Query Frame = 0 Query: 71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379 K+ P NA + + +VD +C C TCR + P VF G + V ++P + + A +A+++CP +IR P P + E FP P+D LPGV+ GYH+ +S G + YLI+ GNI+ID+P+F RLA +IE LGG+ Y +TH+ H W F + R++H DV + VE L G GPW + DI ++ PG++ G+V LF+G + R + LD A ++R S+G Q +S+K L DF WI+P G + + G K+A Sbjct: 59 KQRRPQNA-DGDFFVDHTCIDCDTCRWMAPQVFTRAGGMSAVYKQPTCKQDRLKALQALLSCPTNSIRTEVPPPDILE-AQKTFPIPIDEKKLPGVYHCGYHSSKSYGASSYLIIHPD--GNILIDSPKFTERLARKIEELGGVCYMFLTHKDDVADHGKWSKRF-SCNRILHSGDV-KACTADVETKLDGNGPWRLGQDIMLIHTPGHTEGSV----------------------CLFYMPLKILFTGDHL--LMRESGLDIVAMYNRYSVGTQLDSVKRLLDLDFNWIIPGHGRRIEFKDVGEKNA 336
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_016701896.1 (PREDICTED: uncharacterized protein LOC107917018 isoform X1 [Gossypium hirsutum] >PPD98767.1 hypothetical protein GOBAR_DD04199 [Gossypium barbadense]) HSP 1 Score: 174.5 bits (441), Expect = 6.700e-40 Identity = 103/308 (33.44%), Postives = 154/308 (50.00%), Query Frame = 0 Query: 71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379 K+ P NA + + +VD +C C TCR + P VF G + V ++P + + A +A+++CP +IR P P + E FP P+D LPGV+ GYH+ +S G + YLI+ GNI+ID+P+F RLA +IE LGG+ Y +TH+ H W F + R++H DV VE L G GPW + DI ++ PG++ G+V LF+G + R + LD A ++R S+G Q +S+K L DF WI+P G + + G K+A Sbjct: 59 KQRRPQNA-DGDFFVDHTCIDCDTCRWMAPQVFTRAGGMSAVYKQPTCKQDRLKALQALLSCPTNSIRTEVPPPDILE-AQKTFPIPIDEKKLPGVYHCGYHSSKSYGASSYLIIHPD--GNILIDSPKFTERLARKIEELGGVCYMFLTHKDDVADHGKWSKRF-SCNRILHSGDV-EACTADVETKLDGNGPWRLGQDIMLIHTPGHTEGSV----------------------CLFYMPLKILFTGDHL--LMRESGLDIVAMYNRYSVGTQLDSVKKLLNLDFNWIIPGHGRRIEFKDVGEKNA 336
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_012463932.1 (PREDICTED: uncharacterized protein LOC105783183 isoform X2 [Gossypium raimondii] >KJB78819.1 hypothetical protein B456_013G020800 [Gossypium raimondii]) HSP 1 Score: 174.1 bits (440), Expect = 8.800e-40 Identity = 103/308 (33.44%), Postives = 154/308 (50.00%), Query Frame = 0 Query: 71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379 K+ P NA + + +VD +C C TCR + P VF G + V ++P + + A +A+++CP +IR P P + E FP P+D LPGV+ GYH+ +S G + YLI+ GNI+ID+P+F RLA +IE LGG+ Y +TH+ H W F + R++H DV VE L G GPW + DI ++ PG++ G+V LF+G + R + LD A ++R S+G Q +S+K L DF WI+P G + + G K+A Sbjct: 59 KQRRPQNA-DGDFFVDHTCIDCDTCRWMAPQVFTRAGGMSAVYKQPTCKQDRLKALQALLSCPTNSIRTEVPPPDILE-AQKTFPIPIDEKKLPGVYHCGYHSSKSYGASSYLIIHPD--GNILIDSPKFTERLARKIEELGGVCYMFLTHKDDVADHGKWSKRF-SCNRILHSGDV-EACTADVETKLDGNGPWRLGQDIMLIHTPGHTEGSV----------------------CLFYMPLKILFTGDHL--LMRESGLDIVAMYNRYSVGTQLDSVKRLLDLDFNWIIPGHGRRIEFKDVGEKNA 336
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_002454836.1 (uncharacterized protein LOC8084455 isoform X1 [Sorghum bicolor] >EES07812.1 hypothetical protein SORBI_3004G356100 [Sorghum bicolor]) HSP 1 Score: 172.9 bits (437), Expect = 2.000e-39 Identity = 100/297 (33.67%), Postives = 149/297 (50.17%), Query Frame = 0 Query: 82 NLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379 + +VD+ C C TCR + P VF + + V +P E E A +A+++CP +I KP + + V + FP P+D LPGV+L GY++ +S G T YL++ GNI+ID+PR+ +LA IE LGG RY +TH H W A ER++H DV E VE L+G GPW I D + + PG++ G+V LF+G + S + L+ F +S+ S+ Q ESI+ L + +FEW+LP G + R + K+A Sbjct: 52 DFFVDQRCIDCQTCRWMAPQVFKRVDGKAAVAAQPSSEEERTKALQALLSCPTSSIHTEKPPKDILQ-VQNMFPLPIDDKLLPGVYLCGYNSEDSYGATSYLVIHP--QGNILIDSPRYTSKLANNIEKLGGARYMFLTHIDDVADHRKW-AEQLKCERIIHMGDV-EEATADVEWKLEGNGPWNIGTDFEFIHTPGHTPGSV----------------------CLYYKPPKVLFTGDHVAKSEESDDLNLFLMYSKQSVSLQLESIRKLLEVEFEWLLPGHGYRIRYKDVQAKNA 321
BLAST of NO02G01880 vs. NCBI_GenBank
Match: OMO59131.1 (Beta-lactamase-like protein [Corchorus capsularis]) HSP 1 Score: 172.9 bits (437), Expect = 2.000e-39 Identity = 103/311 (33.12%), Postives = 157/311 (50.48%), Query Frame = 0 Query: 71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDAKER 382 ++ P N + + +VD +C C TCR + P VF + + V ++P + + A +A+++CP +IR P P + E FP P+D LPGV+ GYH+ +S G TPYLIV GNI+ID+PRF RLA +IE LGG+RY +TH+ H W F +R++H DV + VE L+G GPW + +DI ++ PG++ G V LF+G + R LD +++ S+ +Q +S+K L + DF WI+P G + KDA+E+ Sbjct: 59 RQRRPQNV-DGDFFVDHTCIDCDTCRWMAPQVFTRVDGMSAVYKQPTCKEDRLKALQALLSCPTSSIRTEVPPPDILE-TQKTFPIPIDEKKLPGVYHCGYHSEKSYGATPYLIVHP--EGNILIDSPRFTERLAREIEMLGGVRYMFLTHKDDVADHRKWSKRF-GCDRILHSQDV-EDCTIDVEVKLEGSGPWSLGEDIMLIHTPGHTEGTV----------------------CLLYKSHKILFTGDHL--IMREYGLDIMEIYNKSSVPEQVDSVKKLLEFDFTWIIPGHGRRIEF-----KDAEEK 334 The following BLAST results are available for this feature:
BLAST of NO02G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01880 ID=NO02G01880|Name=NO02G01880|organism=Nannochloropsis oceanica|type=gene|length=1206bpback to top protein sequence of NO02G01880.1 >NO02G01880.1-protein ID=NO02G01880.1-protein|Name=NO02G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bpback to top Synonyms
Publications
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