NO02G01880, NO02G01880 (gene) Nannochloropsis oceanica

Overview
NameNO02G01880
Unique NameNO02G01880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1206
Alignment locationchr2:541245..542450 -

Link to JBrowse

Properties
Property NameValue
DescriptionMetallo-beta-lactamase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:541245..542450 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR0178964Fe4S_Fe-S-bd
Homology
BLAST of NO02G01880 vs. NCBI_GenBank
Match: EWM30520.1 (metallo-beta-lactamase family protein [Nannochloropsis gaditana])

HSP 1 Score: 514.2 bits (1323), Expect = 3.600e-142
Identity = 249/338 (73.67%), Postives = 276/338 (81.66%), Query Frame = 0
Query:   64 TTMRAHNKEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDAKERLLTEAADRFSELGRVGGLSM 402
            T MRA  KEE  GNA +ANLYVDRSC+GCGTCRS+CPGVFG LGL++VVER+PLD+ ETRAAYRAMVTCP+GAIRLRKPDPLVKEVV HDFPTPLDPVALPGV+ LGYHNRESMG TPYLIVR+ G GNIMIDAPRFNGRLA QIE+LGG+RY IVTHEG+APHHDLWHAFFP+SERVVHRMDVTREM+GQVEA+LQGKGPW IDDD+KIVALPGYS G++GV                             LFSGRT+GWS RLNRLDGFAQFSRGSL KQA SIK L KEDF WILP+EGLK+ LP GG  + +ERLL EAA+ F   GRVGGL++
Sbjct:   52 TLMRARAKEESLGNAVDANLYVDRSCSGCGTCRSICPGVFGDLGLQSVVEREPLDKNETRAAYRAMVTCPMGAIRLRKPDPLVKEVVMHDFPTPLDPVALPGVYFLGYHNRESMGVTPYLIVRDNGEGNIMIDAPRFNGRLAQQIESLGGVRYMIVTHEGSAPHHDLWHAFFPSSERVVHRMDVTREMRGQVEAILQGKGPWRIDDDVKIVALPGYSPGSIGV--LFHPSSVSSNGIEEDSKWGKDGERNGILFSGRTLGWSARLNRLDGFAQFSRGSLRKQAASIKGLGKEDFAWILPAEGLKFHLPGGGNAETRERLLAEAAELFLARGRVGGLNV 387          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_005856207.1 (metallo-beta-lactamase family protein, partial [Nannochloropsis gaditana CCMP526] >EKU20157.1 metallo-beta-lactamase family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 395.6 bits (1015), Expect = 1.900e-106
Identity = 211/350 (60.29%), Postives = 236/350 (67.43%), Query Frame = 0
Query:   64 TTMRAHNKEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLD----------GF--AQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDAKERLLTEAADRFSELGRVGGLSM 402
            T MRA  KEE  GNA +ANLYVDRSC+GCGTCRS+CPGVFG LGL++VVER+PLD+ ETRAAYRAMVTCP+GAIRLRKPDPLVKEVV HDFPTPLDPVALPGV+ LGYHNRESMG TPYLIVR+ G GNIMIDAPRFNGRLA QIE+LGG+RY IVTHEG+APHHDLWHAFFP+SERVVHRMDVTREM+GQ       KG               Y                                    +  G    W P L R D          G+  A FSR  L + A SIK L KEDF WILP+EGLK+ LP GG  + +ERLL EAA+ F   GRVGGL++
Sbjct:   54 TLMRARAKEESLGNAVDANLYVDRSCSGCGTCRSICPGVFGDLGLQSVVEREPLDKNETRAAYRAMVTCPMGAIRLRKPDPLVKEVVMHDFPTPLDPVALPGVYFLGYHNRESMGVTPYLIVRDNGEGNIMIDAPRFNGRLAQQIESLGGVRYMIVTHEGSAPHHDLWHAFFPSSERVVHRMDVTREMRGQGGGYPSRKGTL------------AYRRRREDRGAPRLLSWLYRRPFPSLVSEQQWNRGGFEMGKGWRAKWHP-LQRADPGVVCPLESLGWLRAIFSR-KLEETAASIKGLGKEDFAWILPAEGLKFHLPGGGNAETRERLLAEAAELFLARGRVGGLNV 389          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: GAQ88104.1 (metallo-beta-lactamase family protein [Klebsormidium nitens])

HSP 1 Score: 183.7 bits (465), Expect = 1.100e-42
Identity = 103/307 (33.55%), Postives = 155/307 (50.49%), Query Frame = 0
Query:   80 EANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRL-PEGGRKDAKERLLTE 386
            E + +VD +C  C TCR + P  F  L  ++ V R+P    E   A +A++ CP  +IR   P   +K+   + FP  +DP  LPGV+  GYH+  S G T Y + R    GNI+ID+PRF   LA +IE +GG+RY  +TH+     H  W A F   ER++H  DV R     VE  L+G GPW +D++++++  PG++AG V +                             LF+G  + +S R   L  F   +  S+ KQ +S++ L   DF W+LP  G +Y    E  R++  E L+ +
Sbjct:  105 EGDFFVDHTCIDCDTCRWMAPETFSHLNGQSAVHRQPQTPDERTRALQALLACPTASIRTETPPKDIKD-AQNTFPLAIDPETLPGVYHSGYHSENSYGATSYFVHRP-ERGNILIDSPRFTEVLAKRIEQMGGVRYMFLTHQDDVADHAKWAARF-GCERIIHEDDV-RSSTRDVERKLEGSGPWTLDEEVELIHTPGHTAGCVSL----------------------FYKPHKALFTGDHLAYSRRQEGLSIFRGVNWYSVSKQIDSVRKLIPLDFLWLLPGHGRRYHFESEADRREKLEELVAQ 385          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: CBJ29809.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 180.6 bits (457), Expect = 9.400e-42
Identity = 115/359 (32.03%), Postives = 166/359 (46.24%), Query Frame = 0
Query:   82 NLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDD----------------------------------------IKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLK--YRLPEGGRKDAKERLLTEAADRFSELGRVGG 399
            + +VD SC  C  C  + P  F   GL  VV  +P  E +   A++AM+ CP G+IR+ + D  V + +   FP P+D   LPG++ LG   RESMG TPYLIVR  G GNIMID PR+  + A Q+ ALG ++Y IVT    A  H+ W   FP   R++HR+D+ R+ +  +E  L GKGPW++ +D                                        +KIV +PG + G++GV                              F+G T+G S    +LD F +         A S++ L+KE   W++P  G +  YR  + G+ D     L +AA R   L  + G
Sbjct:   16 DFFVDESCVDCDICCWMDPRTFKRSGLGAVVASQPKSEEDRMRAFQAMLACPAGSIRVMRGDRQVIKAL-ESFPLPVDEERLPGIYQLGPTTRESMGNTPYLIVRP-GKGNIMIDVPRYLEQTADQVAALGDVKYMIVTARDNADGHERWKKKFPGMIRILHRLDLVRKTR-IMEERLDGKGPWYLVEDGFESPEDGYVTGDTGKGHNLLPRFDFFEVADEDCAPHDPTVKIVGIPGQTRGSIGVIVEWGKRKRGGKERLG--------------FTGGTVGMSVEKEKLDTFTRTLETDRATLASSVRLLSKEGITWLMPGRGARVMYRTRKEGKAD-----LEKAAGRTEALPNLAG 352          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_016723347.1 (PREDICTED: uncharacterized protein LOC107935280 [Gossypium hirsutum])

HSP 1 Score: 175.3 bits (443), Expect = 3.900e-40
Identity = 100/313 (31.95%), Postives = 158/313 (50.48%), Query Frame = 0
Query:   80 EANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKD-AKERLLTEAADRFS 392
            + + +VD +C  CGTCR + P VF  +G  + V ++P    +   A +A+++CP  +IR   P P + E     FP P+D   LPGV+  GYH+ +S G   YLI+  G  GNI+ID+PRF  +LA +IE +GG+RY  +TH+     H  W   F T +R++H  DV       VE  L+G GPW + DDI +V  PG++ G V                               LF+G  +  +   + L     +++ S+ KQ +S++ L + DF+WI+P  G +    +   K+   E  + E  +++S
Sbjct:   68 DGDFFVDHTCIDCGTCRWMAPQVFTRVGEMSAVYKQPTSSEDRLKALQALLSCPTSSIRTEVPPPDILE-AQKTFPIPVDEKKLPGVYHCGYHSEKSYGAASYLIIHPG--GNILIDSPRFTKKLAKEIETMGGVRYLFLTHKDDVADHAKWATPF-TCDRILHSEDV-EICTADVEMKLEGNGPWSLGDDIMLVHAPGHTEGTV----------------------CLLYKPLKILFTGDHLMMTE--SGLSIMEMYNKYSVPKQVDSVQKLIQFDFDWIIPGHGWRIEFKDFQEKNTVLEAFVREKYNQYS 351          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: KJB78820.1 (hypothetical protein B456_013G020800 [Gossypium raimondii])

HSP 1 Score: 174.9 bits (442), Expect = 5.100e-40
Identity = 103/308 (33.44%), Postives = 155/308 (50.32%), Query Frame = 0
Query:   71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379
            K+  P NA + + +VD +C  C TCR + P VF   G  + V ++P  + +   A +A+++CP  +IR   P P + E     FP P+D   LPGV+  GYH+ +S G + YLI+     GNI+ID+P+F  RLA +IE LGG+ Y  +TH+     H  W   F +  R++H  DV +     VE  L G GPW +  DI ++  PG++ G+V                               LF+G  +    R + LD  A ++R S+G Q +S+K L   DF WI+P  G +    + G K+A
Sbjct:   59 KQRRPQNA-DGDFFVDHTCIDCDTCRWMAPQVFTRAGGMSAVYKQPTCKQDRLKALQALLSCPTNSIRTEVPPPDILE-AQKTFPIPIDEKKLPGVYHCGYHSSKSYGASSYLIIHPD--GNILIDSPKFTERLARKIEELGGVCYMFLTHKDDVADHGKWSKRF-SCNRILHSGDV-KACTADVETKLDGNGPWRLGQDIMLIHTPGHTEGSV----------------------CLFYMPLKILFTGDHL--LMRESGLDIVAMYNRYSVGTQLDSVKRLLDLDFNWIIPGHGRRIEFKDVGEKNA 336          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_016701896.1 (PREDICTED: uncharacterized protein LOC107917018 isoform X1 [Gossypium hirsutum] >PPD98767.1 hypothetical protein GOBAR_DD04199 [Gossypium barbadense])

HSP 1 Score: 174.5 bits (441), Expect = 6.700e-40
Identity = 103/308 (33.44%), Postives = 154/308 (50.00%), Query Frame = 0
Query:   71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379
            K+  P NA + + +VD +C  C TCR + P VF   G  + V ++P  + +   A +A+++CP  +IR   P P + E     FP P+D   LPGV+  GYH+ +S G + YLI+     GNI+ID+P+F  RLA +IE LGG+ Y  +TH+     H  W   F +  R++H  DV       VE  L G GPW +  DI ++  PG++ G+V                               LF+G  +    R + LD  A ++R S+G Q +S+K L   DF WI+P  G +    + G K+A
Sbjct:   59 KQRRPQNA-DGDFFVDHTCIDCDTCRWMAPQVFTRAGGMSAVYKQPTCKQDRLKALQALLSCPTNSIRTEVPPPDILE-AQKTFPIPIDEKKLPGVYHCGYHSSKSYGASSYLIIHPD--GNILIDSPKFTERLARKIEELGGVCYMFLTHKDDVADHGKWSKRF-SCNRILHSGDV-EACTADVETKLDGNGPWRLGQDIMLIHTPGHTEGSV----------------------CLFYMPLKILFTGDHL--LMRESGLDIVAMYNRYSVGTQLDSVKKLLNLDFNWIIPGHGRRIEFKDVGEKNA 336          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_012463932.1 (PREDICTED: uncharacterized protein LOC105783183 isoform X2 [Gossypium raimondii] >KJB78819.1 hypothetical protein B456_013G020800 [Gossypium raimondii])

HSP 1 Score: 174.1 bits (440), Expect = 8.800e-40
Identity = 103/308 (33.44%), Postives = 154/308 (50.00%), Query Frame = 0
Query:   71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379
            K+  P NA + + +VD +C  C TCR + P VF   G  + V ++P  + +   A +A+++CP  +IR   P P + E     FP P+D   LPGV+  GYH+ +S G + YLI+     GNI+ID+P+F  RLA +IE LGG+ Y  +TH+     H  W   F +  R++H  DV       VE  L G GPW +  DI ++  PG++ G+V                               LF+G  +    R + LD  A ++R S+G Q +S+K L   DF WI+P  G +    + G K+A
Sbjct:   59 KQRRPQNA-DGDFFVDHTCIDCDTCRWMAPQVFTRAGGMSAVYKQPTCKQDRLKALQALLSCPTNSIRTEVPPPDILE-AQKTFPIPIDEKKLPGVYHCGYHSSKSYGASSYLIIHPD--GNILIDSPKFTERLARKIEELGGVCYMFLTHKDDVADHGKWSKRF-SCNRILHSGDV-EACTADVETKLDGNGPWRLGQDIMLIHTPGHTEGSV----------------------CLFYMPLKILFTGDHL--LMRESGLDIVAMYNRYSVGTQLDSVKRLLDLDFNWIIPGHGRRIEFKDVGEKNA 336          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: XP_002454836.1 (uncharacterized protein LOC8084455 isoform X1 [Sorghum bicolor] >EES07812.1 hypothetical protein SORBI_3004G356100 [Sorghum bicolor])

HSP 1 Score: 172.9 bits (437), Expect = 2.000e-39
Identity = 100/297 (33.67%), Postives = 149/297 (50.17%), Query Frame = 0
Query:   82 NLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDA 379
            + +VD+ C  C TCR + P VF  +  +  V  +P  E E   A +A+++CP  +I   KP   + + V + FP P+D   LPGV+L GY++ +S G T YL++     GNI+ID+PR+  +LA  IE LGG RY  +TH      H  W A     ER++H  DV  E    VE  L+G GPW I  D + +  PG++ G+V                               LF+G  +  S   + L+ F  +S+ S+  Q ESI+ L + +FEW+LP  G + R  +   K+A
Sbjct:   52 DFFVDQRCIDCQTCRWMAPQVFKRVDGKAAVAAQPSSEEERTKALQALLSCPTSSIHTEKPPKDILQ-VQNMFPLPIDDKLLPGVYLCGYNSEDSYGATSYLVIHP--QGNILIDSPRYTSKLANNIEKLGGARYMFLTHIDDVADHRKW-AEQLKCERIIHMGDV-EEATADVEWKLEGNGPWNIGTDFEFIHTPGHTPGSV----------------------CLYYKPPKVLFTGDHVAKSEESDDLNLFLMYSKQSVSLQLESIRKLLEVEFEWLLPGHGYRIRYKDVQAKNA 321          
BLAST of NO02G01880 vs. NCBI_GenBank
Match: OMO59131.1 (Beta-lactamase-like protein [Corchorus capsularis])

HSP 1 Score: 172.9 bits (437), Expect = 2.000e-39
Identity = 103/311 (33.12%), Postives = 157/311 (50.48%), Query Frame = 0
Query:   71 KEEGPGNAEEANLYVDRSCTGCGTCRSLCPGVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVVTHDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRFNGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTREMKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIKALAKEDFEWILPSEGLKYRLPEGGRKDAKER 382
            ++  P N  + + +VD +C  C TCR + P VF  +   + V ++P  + +   A +A+++CP  +IR   P P + E     FP P+D   LPGV+  GYH+ +S G TPYLIV     GNI+ID+PRF  RLA +IE LGG+RY  +TH+     H  W   F   +R++H  DV  +    VE  L+G GPW + +DI ++  PG++ G V                               LF+G  +    R   LD    +++ S+ +Q +S+K L + DF WI+P  G +        KDA+E+
Sbjct:   59 RQRRPQNV-DGDFFVDHTCIDCDTCRWMAPQVFTRVDGMSAVYKQPTCKEDRLKALQALLSCPTSSIRTEVPPPDILE-TQKTFPIPIDEKKLPGVYHCGYHSEKSYGATPYLIVHP--EGNILIDSPRFTERLAREIEMLGGVRYMFLTHKDDVADHRKWSKRF-GCDRILHSQDV-EDCTIDVEVKLEGSGPWSLGEDIMLIHTPGHTEGTV----------------------CLLYKSHKILFTGDHL--IMREYGLDIMEIYNKSSVPEQVDSVKKLLEFDFTWIIPGHGRRIEF-----KDAEEK 334          
The following BLAST results are available for this feature:
BLAST of NO02G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30520.13.600e-14273.67metallo-beta-lactamase family protein [Nannochloro... [more]
XP_005856207.11.900e-10660.29metallo-beta-lactamase family protein, partial [Na... [more]
GAQ88104.11.100e-4233.55metallo-beta-lactamase family protein [Klebsormidi... [more]
CBJ29809.19.400e-4232.03conserved unknown protein [Ectocarpus siliculosus][more]
XP_016723347.13.900e-4031.95PREDICTED: uncharacterized protein LOC107935280 [G... [more]
KJB78820.15.100e-4033.44hypothetical protein B456_013G020800 [Gossypium ra... [more]
XP_016701896.16.700e-4033.44PREDICTED: uncharacterized protein LOC107917018 is... [more]
XP_012463932.18.800e-4033.44PREDICTED: uncharacterized protein LOC105783183 is... [more]
XP_002454836.12.000e-3933.67uncharacterized protein LOC8084455 isoform X1 [Sor... [more]
OMO59131.12.000e-3933.12Beta-lactamase-like protein [Corchorus capsularis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006816NSK006816Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01880.1NO02G01880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|522718gene_772Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g15gene193Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01880.1NO02G01880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01880 ID=NO02G01880|Name=NO02G01880|organism=Nannochloropsis oceanica|type=gene|length=1206bp
ATGACATCGGTCGTGTTACAAAGGCCCGCAGTCAGAAGAAGAAGACAATG
CAGCGGCCCCCTTATCCTCTCTTTTTCCGTCCTCCTCCTCTCCACCACCG
TAGCCGCCTTCTACTCCTCCTCCTTGTCCAGGGTTCCGCGGCACCACAAT
CAGCAGCAACAACGACGCCTCCATCGGCATTACACGATCACAACAATGCG
TGCCCACAACAAGGAAGAAGGGCCTGGCAACGCCGAAGAGGCAAACTTGT
ACGTCGACCGAAGCTGCACTGGATGCGGGACCTGCCGGAGCCTCTGCCCT
GGAGTGTTCGGTGCCTTGGGCTTACGCACTGTGGTCGAGCGAAAGCCCTT
GGATGAAATCGAAACAAGGGCTGCGTATCGTGCCATGGTTACTTGTCCTC
TAGGAGCTATTCGTCTACGTAAGCCTGACCCGTTGGTCAAAGAGGTGGTG
ACGCATGATTTTCCTACTCCTCTCGATCCGGTGGCTTTGCCTGGGGTGCA
TTTACTGGGGTATCACAATCGAGAGAGCATGGGGACGACGCCTTATTTGA
TTGTGCGGGAGGGAGGGGCGGGAAACATAATGATTGATGCTCCTAGATTC
AACGGCAGGTTAGCAATGCAGATTGAAGCGCTTGGGGGGATCAGGTACAA
TATCGTGACTCATGAAGGCGCGGCTCCACACCATGACTTATGGCATGCAT
TTTTCCCGACGTCGGAAAGGGTGGTTCATCGGATGGATGTGACGAGGGAA
ATGAAGGGGCAGGTGGAGGCAATGCTGCAGGGGAAGGGTCCCTGGTTCAT
TGATGATGACATCAAGATAGTGGCCTTACCTGGCTATTCTGCTGGGGCGG
TTGGAGTTATTTACTACCCCCCACCATCACAGAGCAGTAGTATCAGTGGA
AGTATCAGCATCATCATCAGCAGCAGCAGGAATAATGGTGGCATCTTGTT
CAGCGGTCGTACCATTGGCTGGTCTCCGCGCTTGAACCGTCTGGACGGCT
TCGCCCAATTTTCCCGGGGTAGCCTCGGCAAACAAGCAGAGAGCATCAAA
GCTCTGGCAAAAGAAGACTTCGAATGGATTCTACCTTCTGAAGGACTCAA
GTACCGGTTGCCAGAAGGAGGGAGGAAGGATGCAAAAGAGCGACTGTTGA
CGGAGGCGGCGGATAGGTTTTCGGAGCTAGGGCGGGTGGGCGGGTTGAGC
ATGTAG
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protein sequence of NO02G01880.1

>NO02G01880.1-protein ID=NO02G01880.1-protein|Name=NO02G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MTSVVLQRPAVRRRRQCSGPLILSFSVLLLSTTVAAFYSSSLSRVPRHHN
QQQQRRLHRHYTITTMRAHNKEEGPGNAEEANLYVDRSCTGCGTCRSLCP
GVFGALGLRTVVERKPLDEIETRAAYRAMVTCPLGAIRLRKPDPLVKEVV
THDFPTPLDPVALPGVHLLGYHNRESMGTTPYLIVREGGAGNIMIDAPRF
NGRLAMQIEALGGIRYNIVTHEGAAPHHDLWHAFFPTSERVVHRMDVTRE
MKGQVEAMLQGKGPWFIDDDIKIVALPGYSAGAVGVIYYPPPSQSSSISG
SISIIISSSRNNGGILFSGRTIGWSPRLNRLDGFAQFSRGSLGKQAESIK
ALAKEDFEWILPSEGLKYRLPEGGRKDAKERLLTEAADRFSELGRVGGLS
M*
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Synonyms
Publications