NO02G01720, NO02G01720 (gene) Nannochloropsis oceanica

Overview
NameNO02G01720
Unique NameNO02G01720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1626
Alignment locationchr2:503936..505561 -

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Properties
Property NameValue
DescriptionArmadillo repeat containing 6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:503936..505561 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR000225Armadillo
Homology
BLAST of NO02G01720 vs. NCBI_GenBank
Match: EWM30534.1 (armadillo repeat containing 6 [Nannochloropsis gaditana])

HSP 1 Score: 548.5 bits (1412), Expect = 2.300e-152
Identity = 296/534 (55.43%), Postives = 356/534 (66.67%), Query Frame = 0
Query:   13 KKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQE-----XXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGKVQDADQFGSTKSCFHPVFESSDNIEGAVEAAISAPSNSYRF 542
            KKRISQ TFDETV ENM + E++R +AV DA++QFTSQGVDL NICV L+E DG WL+EVDAQLT    CLDNG  ++LP SW    T+ AL+ALH+ALT++D  +A NARKL+GSK  VNV+AR+WQE  +             A+  AR+LA+AVT+A C GGSAG+ S+  F PTSMRMLC AA++A  ++ R+F +  LSL RVL TRAED+KV +V +GGLD LV  L+ + WASD  IV E C A+KAVTA DDFRKDFSASHTHTRAL  KG IP+LLQ+C RF  D DT A  L ALRNLANN+ESVNQIASEGG+   VRAL+AH  HP L                                       + KIQEHGLAT+GAMALRSP+NC+ L                                         EAFLE GAEPLLRLAGRYQESVDEAYAALRDLKCDVKRV VDP+TG+++  ++FGS K+ F P+F+SS++IEGAV+AAI+APSNSYRF
Sbjct:   33 KKRISQATFDETVYENMVDLEMDRADAVKDALQQFTSQGVDLENICVTLNENDGRWLEEVDAQLTALKNCLDNGTDLSLPPSWSPEATLAALQALHSALTDSDIKRADNARKLLGSKDAVNVIARIWQEWGDEPSCVTLDPAEAEAIAKARLLAVAVTEAACGGGSAGDQSKHAFRPTSMRMLCQAARRAQLREQRSFLIASLSLVRVLSTRAEDHKVSFVEHGGLDTLVECLEKEAWASDCEIVREACGAIKAVTAVDDFRKDFSASHTHTRALTAKGCIPVLLQACRRFGADSDTVATGLDALRNLANNEESVNQIASEGGVVGTVRALQAHLSHPALARAATGLFRNVSADDRHKTRLCKNGAAQLMLEAMREHAQERKIQEHGLATLGAMALRSPDNCRHLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAFLEAGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVIVDPLTGEIKAPEEFGSAKTSFRPLFDSSNDIEGAVQAAINAPSNSYRF 566          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: OWZ09533.1 (hypothetical protein PHMEG_00017753 [Phytophthora megakarya])

HSP 1 Score: 171.0 bits (432), Expect = 1.000e-38
Identity = 155/546 (28.39%), Postives = 241/546 (44.14%), Query Frame = 0
Query:   12 AKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICV--ALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCE-TCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHR---------FRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEG--------GAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGKVQDADQF--GSTKSCFHPVFESSDNIEGAVEAAISAP 536
            ++++ISQ TFDE V EN+E+F++  EEA+ DAV+QF SQGVDL NI    A    DG   + + A+L   I  L +  +  L    D+V  +V       A   +  ++   AR + G    ++ +  L              AVV +    L +   LC+  +    ++D      M+ L    ++   Q+D    +  L+L +  C + E NK H+ +  G++ L   L+    A +R ++ +      + +T  DD R  FS +    +ALV +  IP  L    +             +D     LA L+ +A  +E+  QIA   GL      ++A+  +  +                                          IQ++  A + A+ALRSPENC+ LV LGAV  I ++++ H    +V RQA LA+RNMV+R  E+   FL            EPLLR A +Y+   DEAYAALRDL CD++  +                 + K  F+PV   S+ + G+VE A  AP
Sbjct:    4 SRRQISQETFDECVAENVEDFDMSLEEAIADAVQQFESQGVDLSNIIKSGATQTADGQ--EPLPARLKRLIAELQDVSK--LKNEQDQVLKLV-------AELQSVCEEVPEARVVAGRNDAIDTLVEL---------LGADAAVVTSCCNLLVL---LCADNA---DNQDFVGVAGMQRLVETLKR---QEDEETVIRILTLVKTACVKHESNKAHFTKANGVEALCRHLER---AKEREVLSKHLALCFRVLTINDDPRATFSQAQDTIKALVERDVIPYSLDILRQAGRGDGAQVSNISVDLLVNWLAVLKQVAVTEENCQQIADLDGLTTVQNVMQAYEHNALVAKRCITVFRNVAAADELKRAILQSGGIERTLLIMHRHEADASIQQNACAMLAAIALRSPENCRALVDLGAVRQISRSMQAHRRDVAVLRQASLAVRNMVARSVELRPRFLHDEPEIEPLLQIEPLLREAQQYRGCGDEAYAALRDLGCDIQLSSFGAAAASAAATGSIKAPTIKPRFNPVQAQSNQLLGSVEEAAEAP 517          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_024579533.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG43164.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 167.9 bits (424), Expect = 8.500e-38
Identity = 152/547 (27.79%), Postives = 238/547 (43.51%), Query Frame = 0
Query:    9 AGPAKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLL---VGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQ---------SCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFL--EGGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGKVQDADQFGSTKSC-FHPVFESSDNIEGAVEAAISAPSNSYR 541
            A  A+++ISQ TFDE V EN+E+FE+  EEAV DA++QF SQGVDL NI  A  +      + +  +L   I          L   W+    ++ L +L   L N   ++   AR   G    ++V+  L +               D  ++ ++ +  L    +    ++D      M+ +    ++   ++D    +  L L +  C + E+NK ++ +  G++ L   +   KD+   S +  +C      + +T  DD R  FS +    +ALV +G I  +L          +        D     LA L+ LA  +E+ +QIA   G+ +    ++A   +  +                                          IQ++  AT+ A+ALRS EN + LV LG    I +A++ H    +V RQA LAIRNMV+R  ++   FL  E   E LLR A +Y+   DEAYAALRDL CD++  T     G          TK   F+PV   S N+ G V+    AP  +YR
Sbjct:    2 ASTARRQISQETFDECVAENVEDFEMSLEEAVADAIQQFESQGVDLSNIIKAGKKQVVDGQEPLPLRLKRLIR--------ELQELWNSHRDMIKLLSLINELQNI-FEEVPEARVAAGRNDAMDVLLSLLE--------------ADTSVVVISSSNLLVLLCADNVDNQDFIGAFGMQQIVKVLER--WREDVETLVRLLPLVKAACFKHENNKANFSKKNGIEELCRHLDGTKDNKMLSKQLALC-----FRVLTINDDPRAVFSQAQDTVKALVERGVITYILDFLRHAGCSGTAQNSSASPDLLTNWLAVLKQLAITEENCHQIADLDGVIIVQSVMKAFHQNAAIAKRCITVFRNMAAADSLKRTILQSGTIEQTLLAMECHDADASIQQNACATLAAIALRSSENSRVLVDLGVARQISRAMQTHRRDVAVLRQASLAIRNMVARSVDLRSRFLHDEPEIEALLREAQQYRGCGDEAYAALRDLSCDIQLSTY----GSAASGSYNAPTKILRFNPVQVQSSNLIGRVQETAEAPCRNYR 514          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_016160556.1 (PREDICTED: armadillo repeat-containing protein 6 [Ficedula albicollis])

HSP 1 Score: 159.5 bits (402), Expect = 3.000e-35
Identity = 136/479 (28.39%), Postives = 210/479 (43.84%), Query Frame = 0
Query:   14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491
            K+I+Q TFD+ V+EN+ EFE++ EEAV +AV+QF SQGVDL NI  A+        +    Q+   +  L   V     A  D       L AL A      A +    R   G+   +    RL    +            D+ +LA +   AL  G        D+      ++L  + ++   ++D    L  +   R  C + E N+  +V+ G L LL GA+     +++  +V     AL+ +T  DD R  F  +H H + +V     + +L+++   FR +    +   A L  L+  +E   +I   GGL+  V  L     HP +                                      G  +I E G A +  +ALR PENC  ++  G  L  LQA++ H    +VQ+QAC+ IRN+VSR  ++ +  L  GAEPL+  A   +++  D A AALRDL C V+
Sbjct:    4 KQIAQETFDDAVQENITEFEMDPEEAVREAVQQFESQGVDLSNIVKAVPPPASENGQRQKHQILLSLESLCRAV-----AERDVAELPRQLSALAAQCREQPASRYLAGRN--GAYPALLSACRLAAGDR------------DSLLLAFSTLAALLDG------QPDLLDAAGQQLLLQSLRE--RREDAEMTLAGIRCVRHACLKHEQNRQDFVKGGILPLLTGAITQHGHSAE--VVRAAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFRDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVGAGATELIVLAISRHLGNPQICEQGCAALCVLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDLSQPILALGAEPLISEARAAHRDCDDVARAALRDLGCKVE 453          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_008618215.1 (hypothetical protein SDRG_13892 [Saprolegnia diclina VS20] >EQC28345.1 hypothetical protein SDRG_13892 [Saprolegnia diclina VS20])

HSP 1 Score: 159.5 bits (402), Expect = 3.000e-35
Identity = 155/536 (28.92%), Postives = 235/536 (43.84%), Query Frame = 0
Query:    8 AAGPAKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTN---ADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLAGRYQESV----DEAYAALRDLKCDVKRVTVDPVTGKVQDADQFGSTKSC-FHPVFESSDNIEGAVEAAISAP 536
            A   AKK+I+Q TF++ VRENM+EFE++ +EAV DA++QF SQGVDL +I  AL     H +          +  L++    AL A  D V    AL      LT+   ADA  A +A+++ G      V+  L Q   +         V+ A +  +   Q    G       + +  PT+   + NAA               L+  + +C + E NK H +   G+ LL+  L+    ++D   + +    ++ +T  DD    FS +H   +  V +  IP+  +      +D DT A  LA L+ LA  +++  +I   G LDL       H  H  +                                        V IQ    AT+ A+ LRSP NC+++V L A + +  A+ +     S+ RQA LA+RNMV R  E+    LE   EPL+ L  R+   +    DEAYAALRDL CD+      P+    Q         SC F+P  ++S+ ++ +V A   AP
Sbjct:    2 ATKQAKKQITQETFNDCVRENMDEFEMDEDEAVDDAIKQFESQGVDLSSIVKALTTSVVHPV----------VVALES--LRALAADADVVALDQALPHYTILLTHFRAADAAAATSAKEMAGRNDGTTVLLGLLQGSVDHSMQMQTLVVLHAMVNGVKDNQDFV-GVDGILQLQALAAPTAATPVQNAA---------------LAALKTICAKHESNKKH-LNPAGIRLLMSLLETRKESTDTKHIGD---LIRTLTINDDPTAMFSQAHDIVKLFVDESLIPMTFEHISVVASDADTVAVWLAVLKQLAVTEDNCRKIVDSGALDLVPNLQATHAKHRGV--IKHSLGLLRNIAGVDEYKHVVTTMVPSILATMQEHASDVGIQTMACATIAAVCLRSPVNCQKVVSLRAHVWVATAMASFPGLPSLLRQASLALRNMVVRNEELRPLVLE---EPLVELMLRHAMPLRGCGDEAYAALRDLGCDI------PLAAITQQG-------SCNFNPTMDTSNMLQSSVAANARAP 487          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_014742730.1 (PREDICTED: armadillo repeat-containing protein 6 [Sturnus vulgaris] >XP_014742731.1 PREDICTED: armadillo repeat-containing protein 6 [Sturnus vulgaris])

HSP 1 Score: 157.5 bits (397), Expect = 1.100e-34
Identity = 135/479 (28.18%), Postives = 207/479 (43.22%), Query Frame = 0
Query:   14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491
            K+I+Q TFD+ V+EN+ EFE++ EEAV +AV QF SQGVDL NI  A+        +    Q    +  LD+  +    A    +   ++  A       A   +    R L G KG   VV    Q            A  D  +L     QALC+  +  +   D+       +L  + ++   + D    L  +   R  C + E N+  +V+ G L LL GA+     +++  +V     AL+ +T  DD R  F  +H H + +V     + +L+++   F  +    +   A L  L+  +E    I   GGL+  V  L     HP +                                      G  +I E G A +  +ALR PENC  ++  G  L  LQA++ H    +VQ+QAC+ IRN+VSR  ++ +  L  GAE L+  A   +++  D A AALRDL C V+
Sbjct:    4 KQIAQETFDDAVQENITEFEMDPEEAVREAVLQFESQGVDLSNIVKAVRPPAS---ENGQRQKHQILLTLDSLARAVAEADMGELPQQLSAFA-------AQCKEQLAFRYLAGQKGAYPVVFSACQ-----------LAAGDRELL----LQALCTLSALLDGQPDLLDAAGQELLLQSLRE--RRDDADMTLAGIRCLRHACLKHEQNRQDFVKGGILPLLTGAIVQHGHSAE--VVRTAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQDIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCVLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDLSQPILAMGAELLIAEARAAHRDCDDVARAALRDLGCQVE 453          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_019369154.1 (PREDICTED: armadillo repeat-containing protein 6 [Gavialis gangeticus] >XP_019369155.1 PREDICTED: armadillo repeat-containing protein 6 [Gavialis gangeticus])

HSP 1 Score: 155.6 bits (392), Expect = 4.400e-34
Identity = 138/487 (28.34%), Postives = 202/487 (41.48%), Query Frame = 0
Query:   12 AKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDR---VGTVVALRALHAALTNADADKAANARKLMGSKGTVNVV---ARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKG-AIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491
            A KR++Q TFDE V+EN+ EF+++ EEAV +AV QF SQGVDL  I  A         +  + Q    +  LD          W R     + +++   H A  +        +R L G KG   VV    RL    +                    + QAL +  +  E   D+      +ML    ++     D    L  +   R  C + E N+   V+ G L LL  A+      +  ++V E C AL+ +T  DD R  F  +H H R +V +   + +L+++   F  D        A L  L+  +E   +I   GGL+  V  L        L                                         +I E G A +  +ALR PENCK ++  G  L  LQA++ H    +VQ+ AC+ IRN+VSR  +  +  LE GAE L+  A   +Q+  D A AALRDL C V+
Sbjct:    2 ASKRVTQETFDEVVQENITEFDMDPEEAVREAVEQFESQGVDLSTIVKAAPRPAS---ENGEGQKHEILQTLD----------WLRKSIADSELSVAGEHLASLSKQCKMQLASRYLAGQKGAYPVVLSACRLASGDES------------------TMLQALQALSALMEGQPDLLDSVGQKMLLQTLKE--KADDVEMMLAGIRCVRHACLKHEQNRQDLVKGGLLPLLTSAIVQH--GNHASLVREACSALRIMTFDDDIRVPFGHAHDHARMIVAENDGLKILIEAAKAFPGDSSVLTELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADCIDQKELVKQVLSAVRAIAGNDDVKDAIISAGGTDLIVLAMNHHLANPQICEQGCAALCMLALRKPENCKVIMEGGGALAALQAMKAHPREVTVQKHACMLIRNLVSRSQDFSQPILEMGAESLIAEALAAHQDCGDVAKAALRDLGCKVE 453          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_010009649.1 (PREDICTED: armadillo repeat-containing protein 6 isoform X2 [Nestor notabilis] >KFQ42007.1 Armadillo repeat-containing protein 6 [Nestor notabilis])

HSP 1 Score: 155.2 bits (391), Expect = 5.700e-34
Identity = 134/479 (27.97%), Postives = 206/479 (43.01%), Query Frame = 0
Query:   14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491
            K+I+Q TFD+ V+ENM EFE++ EEAV +AV+QF SQGVDL NI  A+        ++   ++   +  L   V            + +A  A    +  A   +    R L G  G   VV    Q            A  D  ++     +A  S  +  +   D+   T   +L    Q+   ++D    L  +   R  C + E N+  +V+ G L LL GA+     ++D  +V     AL+ +T  DD R  F  +H H + +V     + +L+++   F  +    +   A L  L+  +E   +I   GGL+  V  L     HP +                                         +I E G A +  +ALR PENC  ++  G  L  LQA++ H    +VQ+QAC+ IRN+VSR  +  +  LE GAE L+  A   +++  D A AALRDL C V+
Sbjct:    4 KQITQETFDDAVQENMTEFEMDPEEAVREAVQQFESQGVDLSNIVKAVRPPASENGQKQKHEILLTLDALGKAV----------ADSDLAEVAKQLVVFTAQCKEQLAFRCLAGQNGAYPVVFSACQ-----------VASGDRNLM----LEAFYSLSALLDGQPDLLDSTGQDLLLQTLQE--YREDADMVLAGVRCVRHACLKHEQNRQDFVKGGILPLLTGAIVQHRHSAD--VVRAAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSSVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADCIDHPDVVKQVLSAIRAVAGNDDVKDAIVSAGATDLIVLAISHHLANPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDFSQPILEMGAENLITEARATHRDCDDVAKAALRDLGCKVE 453          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_005505520.1 (armadillo repeat-containing protein 6 [Columba livia] >XP_013223447.1 armadillo repeat-containing protein 6 [Columba livia] >PKK19456.1 armadillo repeat containing 6, transcript variant X1 [Columba livia])

HSP 1 Score: 151.8 bits (382), Expect = 6.300e-33
Identity = 134/484 (27.69%), Postives = 207/484 (42.77%), Query Frame = 0
Query:   14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVA----LRALHAALTNADADKAANA-RKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491
            K+I+Q TFD+ V+EN+ EFE++ EEAV +AV+QF SQGVDL NI  A+ +                    +NG +  +  + D +G  VA           +   D  K   A R L G  G  +VV    Q            A  D  ++     +A  +  +  +   D+       +L    Q+   ++D    L  +   R  C + E N+  +V+ G L LL GA+     ++D  +V      L+ +T  DD R  F  +H H + +V     + +L+++   F  +    +   A L  L+  +E   +I   GGL+  V  L     HP +                                         +I E G A +  +ALR PENC  ++  G  L  LQA++ H    +VQ+QAC+ IRN+VSR  +  +  LE GAE L+  A   +++  D A AALRDL C V+
Sbjct:    4 KQIAQETFDDAVQENITEFEMDPEEAVREAVQQFESQGVDLSNIVKAVRQ-----------------PASENGQKHQILLTLDSLGRAVADSDLAEMAEQLVVFTDQCKEQLAFRYLAGQNGAYSVVFSACQ-----------LASGDRNLM----LKAFSTLSAVLDGQPDLLDSAGQVLLLQTLQE--YREDAEMTLAGMRCIRHACLKHEQNRQDFVKGGVLPLLTGAIVQHGDSAD--VVRTASSTLRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSSVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADSIDHPDVVKQVLSAIRAVAGNDDVKDAIVNAGTTDLIVLAISHHLANPQICEQGCAALCMLALRKPENCNVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDFSQPILEMGAENLITEARATHKDCDDVAKAALRDLGCKVE 451          
BLAST of NO02G01720 vs. NCBI_GenBank
Match: PKK19455.1 (armadillo repeat containing 6, transcript variant X2, partial [Columba livia])

HSP 1 Score: 151.8 bits (382), Expect = 6.300e-33
Identity = 134/484 (27.69%), Postives = 207/484 (42.77%), Query Frame = 0
Query:   14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVA----LRALHAALTNADADKAANA-RKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491
            K+I+Q TFD+ V+EN+ EFE++ EEAV +AV+QF SQGVDL NI  A+ +                    +NG +  +  + D +G  VA           +   D  K   A R L G  G  +VV    Q            A  D  ++     +A  +  +  +   D+       +L    Q+   ++D    L  +   R  C + E N+  +V+ G L LL GA+     ++D  +V      L+ +T  DD R  F  +H H + +V     + +L+++   F  +    +   A L  L+  +E   +I   GGL+  V  L     HP +                                         +I E G A +  +ALR PENC  ++  G  L  LQA++ H    +VQ+QAC+ IRN+VSR  +  +  LE GAE L+  A   +++  D A AALRDL C V+
Sbjct:   35 KQIAQETFDDAVQENITEFEMDPEEAVREAVQQFESQGVDLSNIVKAVRQ-----------------PASENGQKHQILLTLDSLGRAVADSDLAEMAEQLVVFTDQCKEQLAFRYLAGQNGAYSVVFSACQ-----------LASGDRNLM----LKAFSTLSAVLDGQPDLLDSAGQVLLLQTLQE--YREDAEMTLAGMRCIRHACLKHEQNRQDFVKGGVLPLLTGAIVQHGDSAD--VVRTASSTLRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSSVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADSIDHPDVVKQVLSAIRAVAGNDDVKDAIVNAGTTDLIVLAISHHLANPQICEQGCAALCMLALRKPENCNVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDFSQPILEMGAENLITEARATHKDCDDVAKAALRDLGCKVE 482          
The following BLAST results are available for this feature:
BLAST of NO02G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30534.12.300e-15255.43armadillo repeat containing 6 [Nannochloropsis gad... [more]
OWZ09533.11.000e-3828.39hypothetical protein PHMEG_00017753 [Phytophthora ... [more]
XP_024579533.18.500e-3827.79Uncharacterized conserved protein [Plasmopara hals... [more]
XP_016160556.13.000e-3528.39PREDICTED: armadillo repeat-containing protein 6 [... [more]
XP_008618215.13.000e-3528.92hypothetical protein SDRG_13892 [Saprolegnia dicli... [more]
XP_014742730.11.100e-3428.18PREDICTED: armadillo repeat-containing protein 6 [... [more]
XP_019369154.14.400e-3428.34PREDICTED: armadillo repeat-containing protein 6 [... [more]
XP_010009649.15.700e-3427.97PREDICTED: armadillo repeat-containing protein 6 i... [more]
XP_005505520.16.300e-3327.69armadillo repeat-containing protein 6 [Columba liv... [more]
PKK19455.16.300e-3327.69armadillo repeat containing 6, transcript variant ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006795NSK006795Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01720.1NO02G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574027gene_755Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g30gene178Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01720.1NO02G01720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01720 ID=NO02G01720|Name=NO02G01720|organism=Nannochloropsis oceanica|type=gene|length=1626bp
ATGACCTCCACCACCGCGCCTGCCGCGGGGCCCGCAAAGAAGAGAATATC
GCAAGTCACGTTCGATGAGACGGTGCGGGAGAACATGGAGGAGTTTGAGT
TAGAGCGGGAAGAGGCCGTGACGGATGCTGTTCGGCAGTTCACGTCGCAA
GGCGTTGACTTGGGCAACATTTGCGTGGCCTTGCACGAATGCGACGGGCA
TTGGCTCAAGGAGGTCGATGCACAATTGACTTTCTTCATAACGTGCTTAG
ATAATGGGGTCCAGGTAGCGTTGCCGGCATCGTGGGACCGTGTGGGGACG
GTGGTGGCTTTGCGGGCTCTGCACGCGGCTTTGACGAATGCGGACGCTGA
CAAAGCAGCGAATGCGCGGAAGCTGATGGGCTCTAAAGGAACGGTGAATG
TGGTGGCACGGTTATGGCAAGAACATCAGGAAGAAGCTGCTGCTGACGAT
GATAGTGCTGTGGTCGATGCCCGCATCCTGGCACTGGCCGTGACGCAGGC
TCTGTGTAGTGGAGGCTCTGCGGGGGAGGCAAGCCGTGACATGTTCTGGC
CGACAAGCATGCGAATGCTGTGCAATGCTGCCCAACAAGCATATTCACAA
CAGGACCGAGCGTTCTATTTGCCTTTCCTTTCCTTGGCCCGTGTGTTGTG
CACCCGGGCGGAAGATAACAAGGTGCATTATGTGCGATATGGTGGACTAG
ACCTATTAGTAGGCGCATTGAAAGATGATCCCTGGGCCAGCGACCGCAAT
ATCGTCTGCGAGACCTGCAAAGCTCTAAAGGCTGTGACTGCAACTGATGA
CTTTAGGAAGGATTTCAGCGCCTCACACACCCATACCCGCGCTTTGGTCG
GCAAGGGTGCCATCCCCCTCCTCCTTCAATCATGTCACCGCTTTCGCACC
GATCTCGACACTTCGGCCGCCGCCCTGGCCGCCTTGCGAAATTTGGCCAA
CAACGACGAGAGCGTCAATCAGATTGCCTCGGAGGGAGGCTTAGATCTCG
CGGTACGTGCCTTGGAAGCGCATTGGTTTCATCCTCCTCTGGCCCAAACG
GCCATTGGGCTGTTTCGCAACATCTCTGCCAATGATCGACACAAGACAAG
CTTGTGCAATAACGGTGCTGCGGAATTGATGCTCAAGGCTATGAAAAAGC
ACGGGGGAAAAGTGAAGATTCAAGAACATGGGCTCGCGACGATGGGTGCA
ATGGCTCTGCGGAGCCCTGAAAACTGTAAGCAGCTGGTGGGGCTGGGTGC
GGTGTTGGTGATCTTGCAAGCACTACGCAACCATGCGGAGGCTCGTAGCG
TCCAGAGGCAGGCATGCTTGGCAATCAGGAACATGGTAAGCCGGGAACCG
GAGGTGGGGGAGGCATTTTTGGAGGGGGGAGCGGAACCCTTGTTGAGACT
TGCGGGGAGGTATCAGGAAAGCGTGGATGAGGCATATGCGGCGCTGCGTG
ACTTGAAATGTGATGTAAAGAGAGTGACCGTTGACCCTGTCACAGGGAAG
GTTCAGGATGCAGACCAATTTGGGAGTACCAAGAGTTGTTTCCACCCCGT
GTTTGAGAGTAGTGATAATATCGAGGGGGCAGTGGAAGCCGCTATCAGTG
CGCCGTCTAACTCGTATCGATTTTAA
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protein sequence of NO02G01720.1

>NO02G01720.1-protein ID=NO02G01720.1-protein|Name=NO02G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bp
MTSTTAPAAGPAKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQ
GVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGT
VVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEEAAADD
DSAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQ
QDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRN
IVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHRFRT
DLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLAQT
AIGLFRNISANDRHKTSLCNNGAAELMLKAMKKHGGKVKIQEHGLATMGA
MALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREP
EVGEAFLEGGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGK
VQDADQFGSTKSCFHPVFESSDNIEGAVEAAISAPSNSYRF*
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Synonyms
Publications