NO02G01680, NO02G01680 (gene) Nannochloropsis oceanica

Overview
NameNO02G01680
Unique NameNO02G01680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2593
Alignment locationchr2:494385..496977 +

Link to JBrowse

Properties
Property NameValue
DescriptionPoly-specific ribonuclease parn
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:494385..496977 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR006941RNase_CAF1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Homology
BLAST of NO02G01680 vs. NCBI_GenBank
Match: EWM30500.1 (poly -specific ribonuclease parn [Nannochloropsis gaditana])

HSP 1 Score: 537.3 bits (1383), Expect = 6.000e-149
Identity = 304/577 (52.69%), Postives = 387/577 (67.07%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAEGEDVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGKG-TEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTEARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLKEGGKEREVAMKVFNYRSLFETNLG-GNDELVYRKEGQLVFHLGWRKEDGTRLNDDSLMKVFGERAASVSILWVDDLSAFAVVNGEEG---LKEEDVMGGLTGPAAAVVRVTPYKKWLEGKEAKERVGSGRRDGGED 573
            MDVTK  FA+ LPE+E ALQ+CEF  +DFEMSGI+L   +G  R  Y DT QERYA+   ++SR+ I+QMG+ I SKV  EKT S  G  A   TL+A P+NFYTFAA+G+DV+LSLSA+HFLKD GMDFNKW+++GVSYTN A E  L+K++                             + LT+ AD++F+K QME+V AW +  ++ G  +  +EEE  EAARR KEL+L RTNAF+RR LFEAI   YP+++TE+RNNQVI++RLS AEK+ER AAR      +  S VGMRLVFKA+ AC +P+VVHNG  DLLFMM+AF+KPLPE L+D K  +  CFP   +YDT+ ISTRE+LLGK+LG D G+EGL   LV E  +       G  LVLAEGFEKY G         +AHEAGYDAYLTGA+FARM+ LL + G E+ + M VF++RS+F TNLG   D  VY ++G+LVFHLGW KE G  L D  LMK+FG+R+A   ILW+DD  AFAV+ G+EG   L+ EDV+  L    + VVRVT +K W   KEA+        + G+D
Sbjct:   20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINL---AGQPRITYADTMQERYAQQRVVASRFKIIQMGISIVSKV--EKTGS-SGNSA-SHTLVACPYNFYTFAADGDDVILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRL------DCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESRNNQVIVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFP-AGVYDTRLISTREDLLGKSLG-DKGLEGLCQALVQETPEG------GVDLVLAEGFEKYGG----SERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLEK-LKMMVFSFRSMFVTNLGEDRDWPVYGQQGELVFHLGWEKEAGKDLKDADLMKLFGDRSADTWILWIDDCGAFAVLQGKEGGEALRGEDVLKALP-ETSTVVRVTTFKDWCAAKEAETEAAGEPVEVGKD 569          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: OLQ14170.1 (Poly(A)-specific ribonuclease PARN [Symbiodinium microadriaticum])

HSP 1 Score: 226.5 bits (576), Expect = 2.300e-55
Identity = 165/556 (29.68%), Postives = 256/556 (46.04%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAEGEDVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTEARNNQV------ILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTG---------VEGLYHTLVVEEDKKEKGAGIGP-KLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLKEGGKEREVAMKVFNYRSLFETNLGGNDELVYRKEGQLVFHLGWRKEDGTRLND--DSLMKVFGERAA------------SVSILWVDDLSAFAVVNGEEG 527
            M+VTK NF +   E+E  L   EF  ID EM+GI LPG     +   GD P  RY+K   ++S Y+I+Q GV +F+K           EE  +   +A  +NFYTF   G  V +  S++HF    GMD+N W+R+GV Y      A L  ++                             I+LT   DI+     +  +  W+  E       G ++         KE  +   NA+LRR + E +  ++P++  E+R  ++      + +RL+ AEK ERDA        + T KVG+R VF A+    KP++ H  ++DL+F  S F  PLPE+  D K  + + FP+  +YDT+ ++  + L    L +D+G           G  H ++ EE + ++  G+   ++ LAEG E+YA            HEAG+DAY+TG  FA M   +     ++    ++  +R+ F  NL G DEL+   +G  +   G    + T   +   S++K    +              S  I WVDD SAFA+   + G
Sbjct:  626 MNVTKSNFLDAAAEVERLLPSVEFVAIDEEMTGIFLPG----LQEFIGDAPSTRYSKMRRVASNYSIIQFGVALFTK-----------EEGSENKFVAHAYNFYTFPETGA-VNMEASSVHFNSKNGMDWNSWIREGVPYVTREAAAKLKLQL-----------------FPEENTSPAAKRIQLTSTFDIENTDKAIASLKDWLAEE-------GQDQ---------KEFEIITCNAYLRRFMHETLRESFPDLAVESRPTKIRGLSTMVALRLTAAEKVERDARIRAEKEAEFTMKVGVRRVFAALANSKKPIIGHACLYDLMFAFSHFEGPLPESFSDFKKSVCDLFPS--VYDTQLLARSDAL---KLKSDSGELQQRFKSFALGEVHRVLREEAEAQRADGVETVQITLAEGHERYATAASY-------HEAGFDAYITGCAFAYMARHVPAEEGDKTFKGRLVMFRNFFNVNLQGEDELI--TDGAYLHTRGLTGRNATEFTEILQSILKKIKAKPEGSDMEATLDSNDSFQIRWVDDDSAFAIFPAQSG 1118          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: CEM11778.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 180.6 bits (457), Expect = 1.400e-41
Identity = 147/530 (27.74%), Postives = 224/530 (42.26%), Query Frame = 0
Query:   16 EVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAEGED-----VVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTEARNN------QVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMR-----ELLKEGGKEREVAMKVFNYRSLFETNLGGNDELVYRKEGQLVFHLGWRKEDGTRLNDDSLMKVFGE------RAASVSILWVDDLSAFAVVNG 524
            E A+    F  ID EM+GI+L  N   ++ +  DTP  RY K   ++S+Y I Q GVC+F++  D     K+       T   RPFNFY F     D     +++  S+M FL+    DF +W+ +G+SY + AGE  L + +                             I+LTR  DI ++   ME V A ++      SG              KEL L   N FL R + E I A +P ++ E R        Q +++ L+  EK+ER+             +VG+R V+K I    KP+VVHNG++DLLF+      PLP+     K   +   P T  YDTK +++            TG+E L   L        + + +  + V+AEGF+ Y             HEAGYDAY+TG +FA          +        +   ++++ +  E +L G D L+   +  ++    W        N+    + F +       A      W+D  S   VV G
Sbjct:    3 EAAVPSAAFIAIDLEMTGITLNSNP-FTKISASDTPDVRYGKMQKVASQYGIAQWGVCLFAEGQDSSGSGKR-------TYEVRPFNFYCFPRAHNDSFSQQLLIDSSSMDFLRSHSFDFGRWMSKGISYLDAAGERNLAESL----------FPTPQQLDPLDMPGRPQHKIELTRQDDISYLANVMESVGAMLQ------SGA-------------KELVLPNCNTFLARAVRETIEARFPHLIVETRPGKSRWIPQRVVLNLTVEEKQEREERDKAAKRKVFREQVGLRRVWKMICKSRKPVVVHNGLYDLLFLYHRMEAPLPDGAAAFKKAKAALLPTT--YDTKLLASHHP---DKQFDSTGLEDLTEQLA-------ERSSLPVEFVMAEGFDTYRADAGNAKF----HEAGYDAYVTGRLFAYFMADPGIPDVSVHANYLHLMRSLWDFNTNVEGDLVGEDRLILDTDKGIIL---WLHGFEHAFNNTDFQRYFSDISGEAGDALKPQFRWIDQSSMLFVVPG 476          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: ORY97393.1 (CAF1 family ribonuclease-domain-containing protein [Syncephalastrum racemosum])

HSP 1 Score: 166.0 bits (419), Expect = 3.600e-37
Identity = 121/448 (27.01%), Postives = 194/448 (43.30%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAA-------EGEDVVLSLSAMHFLKDQGMDFNKWVRQGVSY-TNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTEARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLK 441
            M++ ++ F + LP ++ A+ +C+F  ID E+SG+  PGNS        DT + RYA+    + R+ I+Q G+C F+             + K    IAR FNFY F              +    A  FL  Q  DFNKWV QG+ Y T E  EAY+ +                                      +  F++   + +  WVK  K     +G              +++   NA+ RR++++ +  +Y E+  E R+  + +MRL++ +  +R   +           VG R V   I A  K +V HN + D+  M+  F +PLPE L D K    + FP   + DTKYI +   +L   +G+ T +E L      ++ K        P++ +   F +Y            AHEAGYDAY+TG++F ++   L+
Sbjct:    1 MEIPRQEFQQMLPTIKKAIDECDFIAIDTELSGLHRPGNSKRM-----DTLENRYAEFREATQRFIIIQFGMCTFT------------WDEKAGRYIARAFNFYVFPTAMTGKIQPNRVFMTQAQAFDFLSKQAFDFNKWVYQGIPYLTKEEEEAYISQATQRMTDDLPDIPVDD---------------------KEKAFMEKAKQKIDIWVKDPKKTEDPEG--------------VNINTRNAYQRRLIYQEVRKSYSELTAEGRSGFIRVMRLTQKQLDKRAKEKLARIKKDCEEAVGFRTVIDWISASRKYIVGHNMLLDVCHMIGQFVQPLPEKLSDFKKLAHDLFP--YMADTKYICSTAAILQSEIGSATSLENLRFETNCDKFK-------NPRIDMHMEFPRYINEK--------AHEAGYDAYITGSVFLKLHSYLE 379          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: XP_002182908.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45644.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 161.8 bits (408), Expect = 6.800e-36
Identity = 159/532 (29.89%), Postives = 232/532 (43.61%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYP-ISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAA------EGEDVVLSLSAMHFLKDQGMDFNKWVRQGVSY-TN----EAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTE-ARNNQVILMRLSEAEKKER-DAARXXXXXXKLTSKVGMRLVFKAIGACGK--------------------------------------------PLVVHNGMHDLLFMMSAF-NKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLKEGGKEREVAMK-VFNYRSLFETNLG-GNDELVY 472
            ++VTKENF E   +L   L    F  ID EM+GI++P   G+ RP     P   YA T   +  RY+I+Q+GV +F         S+ GE  + +   AR +NFY F A      E  +VVL+  A+ FL+   M  + W +QGV+Y TN    E   AY+ K++                             ++L R+ DIDF    M  +  W+     E  G   E     AA       L   N+FLRR L+E+I A YP++V E A NNQ+ ++RL+E E + R    R       + +K+GM  VF+AI    +                                            PLVVHNG  D+ F+++ F ++ LP+TL + KG +S  FP  IIYDTK ++T           ++ +  L+  +V    ++  G        L +  E  A            HEA YDAY+TGAI+  + E +K   ++  VA+  V N   L   N G  N  L+Y
Sbjct:    2 VNVTKENFIEQTNDLLQHLPTAAFIAIDEEMTGITVP---GTPRPAKEQPPSALYASTLKYVPERYSIIQLGVVLF------HATSEPGEVHEWQ---ARRYNFYVFPAQDGWSGETREVVLNPGAVAFLQQHNMSLDLWTQQGVTYQTNDKAYETVHAYVEKEL-------IRERAAEDKERHANLQDSTRRRVELRRSEDIDFHARAMASLREWLDAALNEVEGPPIELAPEGAA-----FLLPSCNSFLRRALYESIEAEYPDLVLESAGNNQIRVLRLTEEESQTRKQRLRREDWEKVVVNKIGMWRVFEAISRVCRGEHLDLTSAVLAPSVDAVDFTSPLVPFAEDTLSLGSKSSRRRNIPLVVHNGFMDICFLLTHFHHETLPDTLKECKGLISRYFP--IIYDTKAVTTE---CSTWSNENSALAALFEKVV----RQNNG--------LEDRIEVVADAGRGDATDDQEHEAAYDAYMTGAIYIGLCEQIKSTLQDETVALDGVGNMTHLTIDNEGTENTRLLY 492          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: OMJ84284.1 (hypothetical protein SteCoe_14629 [Stentor coeruleus])

HSP 1 Score: 157.9 bits (398), Expect = 9.900e-35
Identity = 133/485 (27.42%), Postives = 210/485 (43.30%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRP-NYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAE----GEDVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKA--QMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTE------ARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTR-----EELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLKEGGKEREVAMKVFNYRSLFETNLGGND 468
            MDV K NF E +     ++   +   +D E +G+         RP  Y D+ +ERY+    I+S Y I+Q+G+  F +              K+    A P+NFY F +E     + V+L + A++FLK+  MDFN W   G+ Y NEA    L KK+                             +    + DI   K   Q++M     + EK   S +                 +   NA+LR+ L+  +   +  +  E      +R+  ++L +    + +E +A R      +   K+G R +F  +    KPL+VHNG  D+LF +++F + LPE   D K  ++  FP  IIYDT+Y+  R     EE     + T  G++ LY+ L        KG   G ++VL   FEKY           YAHEAG+DA++TG  F ++ E+  E          +  ++S F   L G+D
Sbjct:   17 MDVQKNNFGEAVELFRESINHSQIIALDLEFTGV-------RGRPEGYLDSIEERYSGLRRIASTYKIIQVGLSCFIR--------------KENQWEAHPYNFYVFPSEVPGYNQRVILEVGAINFLKEHHMDFNTWFYNGIPYLNEAQSRDLEKKL---------------------------SEVNEESSEDIILTKTYEQIKMNEICFRIEKWLESNEA-------------HFEIQGLNAYLRKYLYNVVRKKFKGVFMESIKVEGSRDVTLVLKKADHNQIQELEAKRLVEKTEQFYEKIGFRRIFSMLVESKKPLIVHNGCVDILFTIASFQEELPEKYSDFKTLVNRLFP--IIYDTRYLLERIPGFYEEF--DKIATAKGLKELYNFL--------KG-NSGSQIVLGNKFEKY-------YNEKYAHEAGFDAFMTGICFLKLAEVHAE---IENFKNHLPLFKSFFSIRLDGDD 417          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: EKF26952.1 (ribonuclease, putative [Trypanosoma cruzi marinkellei])

HSP 1 Score: 154.5 bits (389), Expect = 1.100e-33
Identity = 149/518 (28.76%), Postives = 219/518 (42.28%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAEGE---------DVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGK-----------------GTE--------EEVREAARRFKELSLTRTNAFLRR---VLFEAIGAAYPEIVTEARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKY-----AGXXXXXXXXXYA----HEAGYDAYLTGAIFARMRELLKEGGKE-----REVAMKVFNYRSLFETNLGGND 468
            M VT++ F    P+    L+ C+F   D EM+GIS    +        DTP+E Y     ++SRYNI+Q+G+C+F        K K    +     +ARPFNF  F    +         DVVLS S++ FL+   MDF  WV QG++Y +   E  L K+                                   A  +   +A  E + A ++  KV  +G+                 G E        +  REA  R  E    + +   RR   V    + A +P    E RN      RL E E+  R+         +L + +G RLVFKA+    KP V HN + DLLF++++ + PLPE+L + K +++E FP  I++DTKYI++R++           + GL+     E   +   A +     L  GFE Y      G          A    HEAGYDA LTG +   +  L + GG +       V  +V  +RSLF  N+G  D
Sbjct:    1 MQVTRDTFPAVFPKFVELLKSCDFYAFDEEMTGIS----TTELPETITDTPEETYRAKRTVASRYNIIQVGICLFH-------KEKNAANSTPAHYVARPFNFILFPHNSDDFNANERSRDVVLSPSSLAFLRRHDMDFQSWVYQGMAYCDANQEEALRKRHEEKYRELDSIHNEGNQEVEGVSLLTEEEKKWYDNA--VTLAQAFSERIQAALEKAKVRNAGQTAGMVEVSAALDLIQSGGREVFLPPQRGKSAREALERHVEQHFHKLSLTFRRQGAVYMGILRAVFP----EERN------RLREKEQVFREG--------ELMNMLGFRLVFKALVESRKPCVGHNCLADLLFLLASLDGPLPESLPEFKRRMNELFP--IVFDTKYIASRQQFFPLERFGARYLSGLFG----EYGFRSANAHV----TLPLGFESYDPLAVGGGERHNSSAANAGGPTHEAGYDALLTGTLLLNL--LAEMGGYDVATAPECVVNRVALFRSLFALNIGAAD 475          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: OMJ85406.1 (hypothetical protein SteCoe_13243 [Stentor coeruleus])

HSP 1 Score: 154.1 bits (388), Expect = 1.400e-33
Identity = 131/487 (26.90%), Postives = 209/487 (42.92%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRP-NYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAE----GEDVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKA--QMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTE------ARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLG-----KTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLKEGGKEREVAMKVFNYRSLFETNLGGNDEL 470
            MDV K NFAE +     ++   +   +D E +G+         RP  Y D+ +ERY+    I+S Y I+Q+G+  F +              K+    A  +NFY F +E     + V+L + A++FLKD  MDFN W   G+ Y NE+    L KK+                             +    + DI   K   Q++M     + EK   SG+                 +   NA+LR+ L+  +   +  +  E      +R+  ++L +    + +E +A R      +   K+G R +F  +    KPL+VHNG  D++F +S F + LPE   D K  ++  FP+  IYDT+Y+   E + G            G++ LY+ L        KG   G ++VL   FEKY           YAHEAG+DA++TG  F ++ E+  E    +        ++S F   L G+D +
Sbjct:    1 MDVQKNNFAEAVELFRESINHSQIIALDLEFTGV-------RGRPEGYVDSIEERYSGLRRIASTYKIIQVGLSCFIR--------------KENQWEAHAYNFYVFPSEVPGYNQRVILEVGAINFLKDHHMDFNTWFYNGIPYLNESQSRDLEKKL---------------------------SEVNEESSEDIVLTKTYEQVKMNEICFRIEKWLESGE-------------SHFEIPGLNAYLRKYLYNVVKKRFKGVFMESIKVEGSRDVTLVLKKADHTQIQEFEAKRLVEKTDQFYEKIGFRRIFSMLVESKKPLIVHNGCLDIMFTISCFQEELPEKYSDFKTLVNRLFPS--IYDTRYL--LENIPGLYEEFDKFAPAKGLKELYNFL--------KG-NSGLQIVLGNKFEKY-------YDEKYAHEAGFDAFMTGICFLKLAEVHAEIENFKNYLPL---FKSFFSIRLDGDDAM 403          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: CDS09676.1 (hypothetical protein LRAMOSA02353 [Lichtheimia ramosa])

HSP 1 Score: 153.7 bits (387), Expect = 1.900e-33
Identity = 116/442 (26.24%), Postives = 186/442 (42.08%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNFYTFAAEGEDVV-------LSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLTRAADIDFVKAQMEMVTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTEARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARM 436
            M++ +  F  +LP ++ A+ +CEF  ID E+SG+  P  +GS R    DT   RYA+    + R+ I+Q G+C F           K +E      IA+ FNFY F       +           A  FL  QG DFNKW+ QG+ Y   A E   V++                                     +  FV+   + + AW++         G   E R              NA+ RR++++ +   YP++  + RN  + +++L++ ++++R   +           VG R V   I A  KP+V HN + D+  +++ F +PLPE + D K    + FP   I DTKYI      L   +GT T +E       +   +  +     P++ +   F +Y             HEAGYDAY+TG  F ++
Sbjct:    1 MEIARHQFLSSLPTVQKAIDECEFMAIDTELSGLHRP--AGSRRL---DTLANRYAEYREATRRFIIIQFGLCTF-----------KWDEPSGR-YIAKAFNFYIFPTSMTGKIQPDRLFLTQAQAFDFLSKQGFDFNKWIYQGIPYLTVAEEEAYVQQARRKMSEDMPDIRIDD--------------------KEKSFVETAKQRIDAWIQDPSKTDDKDGVNIETR--------------NAYQRRLIYQEVRKHYPDLTADGRNGFIRVVKLTDKQREKRAKDQMFKLKKDCAGAVGFRRVIDMISASRKPVVGHNMLLDMCHVIAQFIQPLPEDVQDFKKLARKLFP--CIADTKYICAASPYLQPVIGTATSLE-------ILRSETNRDIFSNPRIDMDMEFPRYIN--------DMQHEAGYDAYITGISFLKL 374          
BLAST of NO02G01680 vs. NCBI_GenBank
Match: XP_009315856.1 (putative ribonuclease [Trypanosoma grayi] >KEG05913.1 putative ribonuclease [Trypanosoma grayi])

HSP 1 Score: 151.4 bits (381), Expect = 9.200e-33
Identity = 142/515 (27.57%), Postives = 210/515 (40.78%), Query Frame = 0
Query:    1 MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDTPQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARPFNF---------YTFAAEGEDVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLVKKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIK--------------------LTRAAD---IDFVKAQMEMVTAWVKTEKVEGSGKGT------EEEVREAARRFKELSLTRTNAFLRRVLFEAIGAAYPEIVTEARNNQVILMRLSEAEKKERDAARXXXXXXKLTSKVGMRLVFKAIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIYDTKYISTREELL------GKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAEGFEKYAGXXXXXXXXXYAHEAGYDAYLTGAIFARMRELLKEGGKERE---VAMKVFNYRSLFETNLGGNDE 469
            M V ++NF    P+    LQ C+F + D EM+GI+ P           DTP+E Y     ++SRYNI+Q+G+C+F K  D  TKS   +       IARPFNF         +T A    DVVLS S++ FL+   M+F  WV  G++Y +   E  L KK                               K                    L RAA+    D V     MV      + ++  G+         + VRE   R+ E ++   +   RR      G  +  I  E R+     M + E   +ER+          L   +G RLVFKA+    KP V HN   D+LF+ ++   PLP TL++ K ++ + FP  I++DT+YI++R++         + L    G  G +H+  V            P  V    F    G           HEAGYDA LTG +   +   +   G       +  ++  +RSL+  NL   +E
Sbjct:    1 MQVNRDNFPAIFPKFVQLLQTCDFFSFDEEMTGINTP----DLPECITDTPEESYRAKSTVASRYNIIQVGICLFHKEKD-ATKSAPAQ------YIARPFNFLLFPNHADDFTAAERSRDVVLSPSSLSFLRRHDMNFQYWVYNGMAYCDGVQEEALRKKHQEKYQKEVFDTKTDAKRKDTQGIDLMTEDEKKWFDNAVATAQAFSDRIQAALERAANEKHSDVVFPSQSMVEVAASMDLLQSGGREVFLPPQRSKNVREKFERYLEQNIPNISLTFRRQGVMQSGTLH-AIFPEERSR----MLIKEQTHRERE----------LMDMLGFRLVFKALAESNKPCVGHNCFADILFLFASLEGPLPGTLLEFKERMRQVFP--IVFDTRYIASRQDYFPVGRFGSRYLSGYFGEYG-FHSANVHVTLPLGFESYDPLTVERSSFGSKGGGGGP------THEAGYDALLTGTLLLNLLAEIGFDGVSNAPNCLVNRISLFRSLYALNLSNTEE 480          
The following BLAST results are available for this feature:
BLAST of NO02G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30500.16.000e-14952.69poly -specific ribonuclease parn [Nannochloropsis ... [more]
OLQ14170.12.300e-5529.68Poly(A)-specific ribonuclease PARN [Symbiodinium m... [more]
CEM11778.11.400e-4127.74unnamed protein product [Vitrella brassicaformis C... [more]
ORY97393.13.600e-3727.01CAF1 family ribonuclease-domain-containing protein... [more]
XP_002182908.16.800e-3629.89predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OMJ84284.19.900e-3527.42hypothetical protein SteCoe_14629 [Stentor coerule... [more]
EKF26952.11.100e-3328.76ribonuclease, putative [Trypanosoma cruzi marinkel... [more]
OMJ85406.11.400e-3326.90hypothetical protein SteCoe_13243 [Stentor coerule... [more]
CDS09676.11.900e-3326.24hypothetical protein LRAMOSA02353 [Lichtheimia ram... [more]
XP_009315856.19.200e-3327.57putative ribonuclease [Trypanosoma grayi] >KEG0591... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006790NSK006790Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01680.1NO02G01680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636056gene_750Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g35gene174Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01680.1NO02G01680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01680 ID=NO02G01680|Name=NO02G01680|organism=Nannochloropsis oceanica|type=gene|length=2593bp
ATGGACGTGACGAAGGAGAATTTTGCCGAGACCCTGCCCGAGCTCGAGGT
GGCACTGCAGGACTGCGAGTTCGCGACCATCGACTTCGAGATGTCGGGAA
TCAGTTTGCCTGGGAATAGCGGTTCTTCCCGCCCTAATTATGGCGACACA
CCACAGGAGAGGTATGCCAAAACGTACCCTATCAGCTCTCGTTACAATAT
CGTGCAGATGGGCGTCTGTATTTTTAGCAAAGTGCCAGACGAGAAGACAA
AGAGCAAGAAGGGGGAAGAGGCCAAAAAGGAAACTTTAATCGCACGGCCA
TTCAATTTTTACACTTTTGCCGCAGAGGGGGAGGACGTGGTCCTGAGCCT
GTCTGCGATGCATTTTTTGAAGGACCAAGGGATGGACTTCAATAAATGGG
TTCGACAGGGCGTATCGTACACAAATGAGGCAGGCGAGGCGTATTTGGTG
AAGAAAATGGAGCAGGAACGGGAGCAGGACCGACAGGACGCCGAGGCAGC
TGCAGCAGCAGCAGCGGGAGGAGGAGAAGCGTCGGAAAAGAGCAGGATAA
AGCTGACAAGGGCAGCAGATATCGACTTCGTCAAGGCCCAGATGGAGATG
GTTACAGCGTGGGTTAAGACTGAAAAGGTCGAGGGGAGTGGGAAAGGGAC
AGAGGAGGAAGTGAGGGAGGCTGCCCGCAGATTCAAGGAGTTGAGCTTGA
CGCGGACGAATGCGTTTTTGCGTCGGGTGTTGTTTGAAGCAATTGGCGCG
GCGTATCCGGAGATAGTGACGGAGGCCAGGAATAACCAGGTGATATTAAT
GAGGCTGTCGGAGGCGGAGAAGAAGGAGAGAGACGCTGCCAGGGAGGCGG
CGAGGCAGGCCAAGTTGACCAGTAAGGTGGGCATGCGCCTGGTGTTCAAG
GCGATTGGCGCGTGTGGTAAACCGTTGGTGGTCCACAATGGGATGCACGA
CTTGCTCTTCATGATGTCTGCATTCAACAAGCCACTTCCCGAGACCTTGA
TAGACTTGAAAGGGCAGCTGTCGGAATGCTTCCCGAATACGATAATTTAC
GATACGAAGTACATCTCGACGAGGGAAGAGTTGTTGGGCAAAACCTTGGG
GACGGATACGGGCGTGGAGGGGCTGTATCATACCTTGGTGGTAGAGGAGG
ACAAGAAGGAGAAAGGGGCTGGGATCGGTCCGAAGTTGGTCTTGGCGGAG
GGGTTTGAGAAATATGCGGGAGGAGGGGAGGGGGGGGGGGGGGGAGGGTA
TGCACATGAAGCGGGGTATGATGCTTATTTGACGGGGGCAATTTTTGCGA
GAATGCGAGAGTTGTTGAAGGAGGGAGGGAAGGAGCGGGAGGTGGCCATG
AAGGTGTTCAATTACCGGAGTTTGTTCGAGACGAATCTCGGGGGAAATGA
TGAGTTGGTGTACCGGAAGGAGGGGCAGTTGGTGTTTCATTTGGGGTGGA
GGAAGGAGGATGGCACAAGATTGAATGACGATTCCTTGATGAAAGTATTT
GGAGAGCGGGCGGCGAGTGTCTCAATCTTGTGGGTTGATGACTTGTCGGC
GTTTGCTGTCGTAAATGGAGAGGAGGGCTTGAAGGAGGAAGACGTGATGG
GCGGGCTTACGGGGCCGGCAGCGGCCGTCGTGCGGGTGACGCCTTATAAG
AAATGGTTGGAAGGGAAAGAGGCGAAAGAAAGGGTCGGGAGTGGACGAAG
GGATGGAGGGGAAGATGATGATGTGGCGGGAGCGTTGGCTTGGATCATGA
AGAGGACGTTGCGGCTGCTGGGGTTGAAGCCGGGGGAGAGGGAGGGACAA
GTTGGGAAGCGCTTGCGTAGTGCCTAGGGGACGACAGGGATAATAAGATT
GCTTTAAATTGAGAATTTAGACGGAATCAAGGACTAACATAATCTGCCAA
ATTAGGCCATGTATTAGATAAAATGCGTCATGTCGAGATCTGAGGTAGAG
AGACAAGAGGCGGCTGAGTAAAAGATTAGGTAGAGAAGATGTAGCTATAG
CAATAGCTCTCAGCAGGTCTTCCAGAAGGCAATGAACAGAGGAAAGAAGG
ATGGCTTTTTATCCTTCTCCTACTATCTCTAATCAGCAATAGGGAAAGAG
GGAGGGAGGGAATGCGAGAGGGGGGAGGAAGGGAGGATCGCTGATCGCCG
ACACTACCTCATGTTTTCTCGGCGACCGACACAGATCAAGAAATCGAAAG
AAAAGTGGTCGACAAAATTACAAGTGACTGTCAGGGAGGGGGGTTGGTTC
CCTTTTTGGTGCAGGACAAGAACATCCAATTGGAGAATCATTTCAGGTAG
AAACGAACCATACTACTCCGGGCTCTCCTATACATGCGGTGCGTAGCCCC
ATATAACGACAGACAGCTGCATTGGTGTTCACTATGTCTGCGGTTGTCGA
GATAACAGAAAACTATTTCTTCGGGCAAACCGTGCCTTCTCATACGAGCT
CGTAAGAAAGGTGCTCGAGACTGACGGGCCTGAGGCGTGCTTTGGACAAG
TCGATCACTGCACTCTTTGAGAAGGCAAAGGAACTTACTGAGAACAGATT
ATGTATGTATTGAACAACGACACAACCAATATCGCCGTGGTAA
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protein sequence of NO02G01680.1

>NO02G01680.1-protein ID=NO02G01680.1-protein|Name=NO02G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=609bp
MDVTKENFAETLPELEVALQDCEFATIDFEMSGISLPGNSGSSRPNYGDT
PQERYAKTYPISSRYNIVQMGVCIFSKVPDEKTKSKKGEEAKKETLIARP
FNFYTFAAEGEDVVLSLSAMHFLKDQGMDFNKWVRQGVSYTNEAGEAYLV
KKMEQEREQDRQDAEAAAAAAAGGGEASEKSRIKLTRAADIDFVKAQMEM
VTAWVKTEKVEGSGKGTEEEVREAARRFKELSLTRTNAFLRRVLFEAIGA
AYPEIVTEARNNQVILMRLSEAEKKERDAAREAARQAKLTSKVGMRLVFK
AIGACGKPLVVHNGMHDLLFMMSAFNKPLPETLIDLKGQLSECFPNTIIY
DTKYISTREELLGKTLGTDTGVEGLYHTLVVEEDKKEKGAGIGPKLVLAE
GFEKYAGGGEGGGGGGYAHEAGYDAYLTGAIFARMRELLKEGGKEREVAM
KVFNYRSLFETNLGGNDELVYRKEGQLVFHLGWRKEDGTRLNDDSLMKVF
GERAASVSILWVDDLSAFAVVNGEEGLKEEDVMGGLTGPAAAVVRVTPYK
KWLEGKEAKERVGSGRRDGGEDDDVAGALAWIMKRTLRLLGLKPGEREGQ
VGKRLRSA*
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Synonyms
Publications