NO02G01490, NO02G01490 (gene) Nannochloropsis oceanica

Overview
NameNO02G01490
Unique NameNO02G01490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1107
Alignment locationchr2:441234..442340 -

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Properties
Property NameValue
DescriptionFAM92 protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:441234..442340 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO02G01490 vs. NCBI_GenBank
Match: EWM30475.1 (FAM92 protein [Nannochloropsis gaditana])

HSP 1 Score: 376.7 bits (966), Expect = 5.600e-101
Identity = 193/245 (78.78%), Postives = 218/245 (88.98%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQLDPNRAMVSMAQELDELNSDKAEEEERAERGNERG 246
            MDEKGR LQGRLDFCERNV TL+ GV+ALL+NH EGCN T+DLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERR IMCERAEERV+ST + + + +L PT+LLL+DRERAL + RAMERK+T+SGE+TLL MLNLEDD D K+QKLANY ECAKHTDEVVDSNFRCFEKSRV+EMKAMLEETLRAEMLYHCRALEILEPLCVSMR+LDP+ AM SM QELDELN+ + E   +++R + RG
Sbjct:    1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEVVDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQELDELNTAEDENNGQSKRAHMRG 245          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: XP_005855488.1 (hypothetical protein NGA_2122420, partial [Nannochloropsis gaditana CCMP526] >XP_005855858.1 hypothetical protein NGA_2122410, partial [Nannochloropsis gaditana CCMP526] >EKU20507.1 hypothetical protein NGA_2122410, partial [Nannochloropsis gaditana CCMP526] >EKU20875.1 hypothetical protein NGA_2122420, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 120.2 bits (300), Expect = 9.500e-24
Identity = 62/76 (81.58%), Postives = 70/76 (92.11%), Query Frame = 0
Query:   40 TLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERAL 116
            T+DLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERR IMCERAEERV+ST + + + +L PT+LLL+DRERAL
Sbjct:    1 TMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERAL 76          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: CBJ25445.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 90.1 bits (222), Expect = 1.000e-14
Identity = 47/125 (37.60%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKL 126
            +DEKGR L GRL+F +RNV  L   +   + +H++G    +  S K++  AAQE F DLQ+ L+ +AE T+R++ ER+ IM +RA+ +VL+ +  ++  ++ PT+ LL+DR+  +      E K+
Sbjct:    3 LDEKGRRLHGRLEFFDRNVAQLIRHISQTVGHHQDGVKHGISFSTKIKTIAAQEPFADLQDRLVGLAEITERISLERKNIMIDRAKSQVLNKLADIKKTVIAPTQALLQDRDSCVKALVKAEEKM 127          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: OWY94400.1 (hypothetical protein PHMEG_00035889 [Phytophthora megakarya])

HSP 1 Score: 87.0 bits (214), Expect = 8.900e-14
Identity = 59/205 (28.78%), Postives = 106/205 (51.71%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLC 206
            M+++GR L  +L F ERN + L+  V  +LK  +E     +  ++ V D AAQE+   L + L ++ E  ++LA E   +M  R E  +L  +  +Q   ++P K LL DRE+A+     +E KL    +    G  N   + + K + L++     ++ + ++D++   F++ R+ +MK +L E  R+   YH + LE+    C
Sbjct:    1 MEQRGRTLAAQLQFMERNSRALEELVAKMLKAREEQETFLVAFAKSVEDIAAQEECTGLAKCLGSLGESGQKLASESHDVMMLRPETEILQVVTQIQDWAIVPMKRLLEDREKAM----KIEAKLQKEYDELKRG--NTAKEKEKKLRMLSDQKRRVENVNTLLDAHMENFDRYRIQKMKKILSELARSMAFYHAKGLELFAVPC 199          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: XP_002908179.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61262.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 86.3 bits (212), Expect = 1.500e-13
Identity = 58/211 (27.49%), Postives = 106/211 (50.24%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQL 212
            M+ +GR L  +L F ERN + L+  V  ++K  +E        ++ + D AAQE+   L + L ++ EC+++L  E   +M  R E  +L  +  +Q   ++P K LL DRE+A      +E KL    E    G    E +  L+   L++     ++ + ++D +   F++ R+ +MK ++ E  R++  YH + LE+    C  + +L
Sbjct:    1 MEHRGRTLAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECAPLAQCLGSLGECSQKLVSESHDVMMLRPETEILQVVTQIQDWAIVPMKRLLEDREKA----TKIEAKLQKEYEELKRGSSTKEKEKKLR--MLSDQKRRVENVNSLLDRHMESFDRYRMQKMKKIVSELARSQAFYHAKGLELFTTSCQGVAKL 205          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: XP_009523371.1 (hypothetical protein PHYSODRAFT_491292 [Phytophthora sojae] >EGZ20654.1 hypothetical protein PHYSODRAFT_491292 [Phytophthora sojae])

HSP 1 Score: 85.1 bits (209), Expect = 3.400e-13
Identity = 59/214 (27.57%), Postives = 110/214 (51.40%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQLDPN 215
            M ++ R+LQ +L F ERN + L+  V  ++K  +E        ++ + D AAQE+   L   L ++ EC ++LA E   +M  R E  +L  +  +Q   ++P K LL DRE+A+     +E KL    +    G    E +  L+   L++     ++ + ++D++   F++ R+ +MK ++ E  R+   YH + LE+    C ++ +L P+
Sbjct:    1 MGQRERSLQAQLQFMERNGRALEELVAKMMKVREEQEAFLGAFARSLEDIAAQEECAPLARCLGSLGECGQKLATESHDVMLLRPETEILQVVTQIQDWAIVPMKRLLEDREKAI----KIEAKLQKEYDELRRGSSAKEKEKKLR--MLSDQKRRVENVNALLDTHMENFDRYRIQKMKKIVSELARSHAFYHAKGLELFAGPCETIAKLHPS 208          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: ETO85472.1 (hypothetical protein F444_00832 [Phytophthora parasitica P1976])

HSP 1 Score: 84.0 bits (206), Expect = 7.500e-13
Identity = 59/217 (27.19%), Postives = 109/217 (50.23%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQLDPNRAM 218
            M+++GR    +L F ERN + L+  V  ++K  +E        ++ + D AAQE+   L + L ++ EC ++L  E   +M  R E  VL  +  +Q   ++P K LL DRE+A+     +E KL    +    G    E +  L+   L++     ++ + ++D++   F++ R+ +MK +L E  R++  YH + LE+    C  + +L    A+
Sbjct:    1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREKAI----KIEAKLQKEYDELRRGSSAKEKEKKLR--MLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKILSELARSQAFYHAKGLELFAVPCQDIAKLQSTDAV 211          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: ETI56740.1 (hypothetical protein F443_00812 [Phytophthora parasitica P1569])

HSP 1 Score: 83.6 bits (205), Expect = 9.800e-13
Identity = 58/217 (26.73%), Postives = 109/217 (50.23%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQLDPNRAM 218
            M+++GR    +L F ERN + L+  V  ++K  +E        ++ + D AAQE+   L + L ++ EC ++L  E   +M  R E  VL  +  +Q   ++P K LL DRE+A+     +E KL    +    G    E +  L+   L++     ++ + ++D++   F++ R+ +MK ++ E  R++  YH + LE+    C  + +L    A+
Sbjct:    1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREKAI----KIEAKLQKEYDELRRGSSAKEKEKKLR--MLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKIVSELARSQAFYHAKGLELFAVPCQDIAKLQSTEAV 211          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: XP_008890384.1 (hypothetical protein PPTG_00691 [Phytophthora parasitica INRA-310] >ETK96525.1 hypothetical protein L915_00763 [Phytophthora parasitica] >ETL49877.1 hypothetical protein L916_00756 [Phytophthora parasitica] >ETM02961.1 hypothetical protein L917_00727 [Phytophthora parasitica] >ETM56216.1 hypothetical protein L914_00743 [Phytophthora parasitica] >ETN24309.1 hypothetical protein PPTG_00691 [Phytophthora parasitica INRA-310] >ETP26510.1 hypothetical protein F441_00805 [Phytophthora parasitica CJ01A1] >ETP54546.1 hypothetical protein F442_00775 [Phytophthora parasitica P10297])

HSP 1 Score: 82.8 bits (203), Expect = 1.700e-12
Identity = 58/217 (26.73%), Postives = 109/217 (50.23%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQLDPNRAM 218
            M+++GR    +L F ERN + L+  V  ++K  +E        ++ + D AAQE+   L + L ++ EC ++L  E   +M  R E  VL  +  +Q   ++P K LL DRE+A+     +E KL    +    G    E +  L+   L++     ++ + ++D++   F++ R+ +MK ++ E  R++  YH + LE+    C  + +L    A+
Sbjct:    1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREKAI----KIEAKLQKEYDELRRGSSAKEKEKKLR--MLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKIVSELARSQAFYHAKGLELFAVPCQDIAKLQSTDAV 211          
BLAST of NO02G01490 vs. NCBI_GenBank
Match: OQR86879.1 (hypothetical protein ACHHYP_09754 [Achlya hypogyna])

HSP 1 Score: 72.4 bits (176), Expect = 2.300e-9
Identity = 57/225 (25.33%), Postives = 113/225 (50.22%), Query Frame = 0
Query:    1 MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHILLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKLAN-YGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEILEPLCVSMRQLDPNRAMVSMAQEL 225
            +DE+ + L   L   ERN+K L+  + A  +  +        +++ + D A  E    L+  + ++ + T+ L+ E   +M  R E++ +  +  +Q   ++P + L+ DR++AL     ++R +    E+  LG  N E D   KR +L N      ++ + ++D +   FE  RV +MK ++ E  RA++ YHC+ +E     C +   +DP +A  +++ +L
Sbjct:    5 VDERSKQLWNMLHLVERNLKVLEEQIAASTRFREARDAHAAKVAKALDDCAVTEACGSLKAAISSLGDATRTLSIETYEMMLVRPEQQAIVELTQIQDWGVVPMRRLIEDRDKALKTQNKLQRDI---DEKLYLGG-NKERD---KRVRLLNDQKRRVENVNSLLDMHLTRFEYYRVTKMKKVMNEMARAQLYYHCKGVECFTVPCRTAPLIDPRQAADAISVDL 222          
The following BLAST results are available for this feature:
BLAST of NO02G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 19
Match NameE-valueIdentityDescription
EWM30475.15.600e-10178.78FAM92 protein [Nannochloropsis gaditana][more]
XP_005855488.19.500e-2481.58hypothetical protein NGA_2122420, partial [Nannoch... [more]
CBJ25445.11.000e-1437.60conserved unknown protein [Ectocarpus siliculosus][more]
OWY94400.18.900e-1428.78hypothetical protein PHMEG_00035889 [Phytophthora ... [more]
XP_002908179.11.500e-1327.49conserved hypothetical protein [Phytophthora infes... [more]
XP_009523371.13.400e-1327.57hypothetical protein PHYSODRAFT_491292 [Phytophtho... [more]
ETO85472.17.500e-1327.19hypothetical protein F444_00832 [Phytophthora para... [more]
ETI56740.19.800e-1326.73hypothetical protein F443_00812 [Phytophthora para... [more]
XP_008890384.11.700e-1226.73hypothetical protein PPTG_00691 [Phytophthora para... [more]
OQR86879.12.300e-925.33hypothetical protein ACHHYP_09754 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006769NSK006769Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01490.1NO02G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573930gene_728Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g55gene156Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01490.1NO02G01490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01490 ID=NO02G01490|Name=NO02G01490|organism=Nannochloropsis oceanica|type=gene|length=1107bp
TGAAAATTGGCGAGCAGTAGCTATAGCATATATTTCGCCTCTCTTTTGGA
TTTGGCCTGCAGTCCATATACCCCCATTGCGCTCATATAAGTCGCAGCAA
CATTTTTTTCATGTCAACATTAAAGATTTGTCATGCTCTTACTCCAAATT
CGAGCAGCATATGGACGAAAAGGGGCGGGCGCTGCAAGGCCGCCTCGATT
TTTGCGAGCGAAATGTCAAGACGCTGCAGCTTGGAGTCAAGGCATTGCTG
AAAAACCACAAGGAAGGATGCAATGCCACGCTCGACCTTTCGCAAAAGGT
TCGGGACACGGCTGCGCAGGAGCAGTTCATCGACCTCCAAGAAGATCTCA
TTGCCATTGCCGAGTGCACCAAGCGCTTGGCGGAGGAGCGAAGGATGATT
ATGTGCGAGCGTGCAGAAGAGCGGGTGCTTTCTACTATCGAGTACGTGCA
GGCGCATATATTGCTTCCAACAAAGCTCTTACTTAGAGACCGGGAGCGAG
CTCTTGCCAGATCTCGGGCCATGGAGAGGAAACTCACATgtgagtgcttg
gggagggaagaagggaggacatgatgggaccacgcaacactaacaagcag
accggtcgggcgcattgcttccatggaatatgttttttcattcatcattt
ctcatctttgttcaacaattagACTCTGGAGAACGAACCTTGCTAGGTAT
GCTCAACCTCGAGGACGACGATGACCTGAAGCGGCAAAAGCTAGCCAATT
ACGGGGAATGCGCCAAGCACACGGATGAGGTGGTGGACAGTAATTTTCGT
TGTTTCGAGAAGAGTAGGGTGATAGAAATGAAGGCTATGCTTGAGGAGAC
ATTACGGGCAGAGATGCTTTACCACTGCCGGGCTTTGGAGATACTGGAGC
CTTTATGCGTTTCCATGCGTCAGCTGGACCCGAATCGTGCAATGGTCAGC
ATGGCGCAGGAGCTAGATGAGCTGAACAGTGACAAGGCGGAAGAAGAGGA
AAGGGCTGAGCGGGGAAATGAAAGAGGTTTGCGGGGTGATGCTCGACGGT
GATCAGGGTAAGCAGTAATAAGGAAAAGGGAAGGCACGGCATAATCTTTA
ATTTAAA
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protein sequence of NO02G01490.1

>NO02G01490.1-protein ID=NO02G01490.1-protein|Name=NO02G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bp
MDEKGRALQGRLDFCERNVKTLQLGVKALLKNHKEGCNATLDLSQKVRDT
AAQEQFIDLQEDLIAIAECTKRLAEERRMIMCERAEERVLSTIEYVQAHI
LLPTKLLLRDRERALARSRAMERKLTYSGERTLLGMLNLEDDDDLKRQKL
ANYGECAKHTDEVVDSNFRCFEKSRVIEMKAMLEETLRAEMLYHCRALEI
LEPLCVSMRQLDPNRAMVSMAQELDELNSDKAEEEERAERGNERGLRGDA
RR*
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Synonyms
Publications