NO02G01330, NO02G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01330 vs. NCBI_GenBank
Match: EWM30468.1 (hypothetical protein Naga_100013g71 [Nannochloropsis gaditana]) HSP 1 Score: 299.7 bits (766), Expect = 1.200e-77 Identity = 159/267 (59.55%), Postives = 186/267 (69.66%), Query Frame = 0 Query: 80 ITQETVTL-STGLPMEVLIA---XXXXXXXXXXXXPFSAIFQPKTKSNNKPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPPS---SLPPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIGK 340 +T ETVT +TGL MEVL A S+ F PK + K PL+F+HGSFHS+WCW+EHFLPFF+ RG+D YAIS RGT SPSP+QE+ ITI THAADLR FL+ FPPS + PI+IGHSFG SVPPSGNGPMT RFLKRD +LALKIVLGFVAKK A WDWLC+ELFF+P+LPP LLR+Y++RL +DSVVGIDVKDFLKELP L+AD TG+GRWV +VP RLVIG+ Sbjct: 71 VTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVR--RKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFG---GAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGR 332
BLAST of NO02G01330 vs. NCBI_GenBank
Match: EWM30467.1 (hypothetical protein Naga_100013g71 [Nannochloropsis gaditana]) HSP 1 Score: 298.9 bits (764), Expect = 2.000e-77 Identity = 159/266 (59.77%), Postives = 185/266 (69.55%), Query Frame = 0 Query: 80 ITQETVTL-STGLPMEVLIA---XXXXXXXXXXXXPFSAIFQPKTKSNNKPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPPS---SLPPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIG 339 +T ETVT +TGL MEVL A S+ F PK + K PL+F+HGSFHS+WCW+EHFLPFF+ RG+D YAIS RGT SPSP+QE+ ITI THAADLR FL+ FPPS + PI+IGHSFG SVPPSGNGPMT RFLKRD +LALKIVLGFVAKK A WDWLC+ELFF+P+LPP LLR+Y++RL +DSVVGIDVKDFLKELP L+AD TG+GRWV +VP RLVIG Sbjct: 71 VTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVR--RKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFG---GAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIG 331
BLAST of NO02G01330 vs. NCBI_GenBank
Match: CBJ29019.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 172.2 bits (435), Expect = 2.900e-39 Identity = 100/280 (35.71%), Postives = 142/280 (50.71%), Query Frame = 0 Query: 80 ITQETVTLSTGLPMEVLIAXXXXXXXXXXXXPFSAIFQPKTKSNNKPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQES-----CITITTHAADLRAFLKSTFPPSSLPPIVIGHSF----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIG 339 + QE + L +G+ M+ L + PK +S PPL+F+HGS+H++WCW+EH++PF + +G++ Y+IS RGTS + P E + I+ H D+R+F ++ P P+ + HSF G SVPPSGNGPMT RF+K+ ++A+KIVLGFV K A W WL R+LFF L + L+RY R DS G+D+ DF +LP +K G+ WV Q P RLVIG Sbjct: 21 LKQENIELPSGVSMQTLSQK-------------PSTGSPK-RSKPPPPLVFIHGSYHAAWCWAEHWMPFLAAKGYETYSISLRGTSGTLIPGAEPDAKGIKVKISDHVDDIRSFAETFLP--GRRPVFVSHSFGGVVLLKLLEELATEGGQGEKENKDKEGADGIRPAVAGGAFLCSVPPSGNGPMTKRFIKQRPVMAVKIVLGFVLKMAVYWPWLARDLFFCQALEQSALKRYMSRFKADSKNGLDLMDFSGQLP-MKMANADGQATWVNQAPPRLVIG 283
BLAST of NO02G01330 vs. NCBI_GenBank
Match: CEM05853.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 164.1 bits (414), Expect = 7.900e-37 Identity = 89/228 (39.04%), Postives = 128/228 (56.14%), Query Frame = 0 Query: 117 QPKTKSNNKPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQES---CITITTHAADLRAFLKSTFPPSSLPPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIGKRQ 342 +P + KPPL+F+HGSFH +WCW+EH++P+FS G++C AI+ RGTS +P P+ E I I H D+ L+ T P ++ ++IGHSFG SVPPSGNGPMT RF+ R ++ A++IV GFV K+A L R+LFF +P + YR+ D +G+DV+ LPS +A +G+ W+ + RLV+G RQ Sbjct: 51 EPAVRDPRKPPLVFVHGSFHGAWCWAEHWMPYFSQLGYECIAINLRGTSGTPVPASEEEIRSIKIERHVEDVADLLRKTVPDGNV--VLIGHSFG----SMTILKLLEQGLVSPKGVALACSVPPSGNGPMTVRFILRSVVDAVQIVRGFVFKQAMTSCALARQLFFDSDMPEEKVEAYRKLFCLDGQIGLDVRSLSGSLPSRQA-LPSGRASWLDESLPRLVMGTRQ 271
BLAST of NO02G01330 vs. NCBI_GenBank
Match: GAX28414.1 (hypothetical protein FisN_4Hh395 [Fistulifera solaris]) HSP 1 Score: 158.3 bits (399), Expect = 4.300e-35 Identity = 96/238 (40.34%), Postives = 124/238 (52.10%), Query Frame = 0 Query: 117 QPKTKSNNKPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPP---SSLPPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPT-------------LPPALLRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIG 339 +PK K NKPP+LFLHGSFH SWCWSE F PFF RG A+++RGT + + + + IT H ADL +FL+ P + + P V+ HSFG SVPPSGNG MT R+LKR L+ + KI GF K+ D LCRELFF +P A + RY+ A+DS ID+ D K+LPS A G+ +V Q+P LV+G Sbjct: 66 KPK-KWTNKPPILFLHGSFHGSWCWSERFFPFFVERGFPVVALNWRGTGGTKAGDGVTKVKITEHVADLNSFLEDVLPQLGYADVKPTVVCHSFG---GLAVMKYLEQNPASKFSGIVMMCSVPPSGNGKMTMRYLKRSLIDSWKITAGFAMKRVLTNDVLCRELFFGGMIKAREDGSVEDYGIPDADVHRYQAYFARDSAATIDLLDLAKQLPS-SATTSDGRASFVAQLPPCLVMG 298
BLAST of NO02G01330 vs. NCBI_GenBank
Match: GAX19415.1 (hypothetical protein FisN_4Lh395 [Fistulifera solaris]) HSP 1 Score: 152.1 bits (383), Expect = 3.100e-33 Identity = 91/230 (39.57%), Postives = 119/230 (51.74%), Query Frame = 0 Query: 125 KPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPP---SSLPPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPAL-------------LRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIG 339 KPP+LFLHGSFH SWCWSEHF PFF RG A+++RGT + + + I H ADL +FL+ P + + PIV+ HSFG SVPPSGNG MT R+LKR L+ + KI GF K+ + D LCRELFF + + RY+ A+DS ID+ D K+LPS + G+ +V Q+P RLV+G Sbjct: 73 KPPILFLHGSFHGSWCWSEHFFPFFVERGFPVVALNWRGTGGTKAGDGVKKVKIMEHVADLSSFLEHVLPRLGYADVKPIVVCHSFG---GLAVMKYLEQNPASKFSGIVMMCSVPPSGNGKMTMRYLKRSLMDSWKITAGFAMKRVLKNDVLCRELFFGGKIKTREDGSIEDYGITDDDIHRYQAYFARDSNATIDLFDLAKQLPS-SSTISDGRASFVAQLPPRLVMG 298
BLAST of NO02G01330 vs. NCBI_GenBank
Match: XP_005762145.1 (hypothetical protein EMIHUDRAFT_77057 [Emiliania huxleyi CCMP1516] >XP_005771868.1 hypothetical protein EMIHUDRAFT_65628 [Emiliania huxleyi CCMP1516] >XP_005776271.1 hypothetical protein EMIHUDRAFT_74244 [Emiliania huxleyi CCMP1516] >EOD09716.1 hypothetical protein EMIHUDRAFT_77057 [Emiliania huxleyi CCMP1516] >EOD19439.1 hypothetical protein EMIHUDRAFT_65628 [Emiliania huxleyi CCMP1516] >EOD23842.1 hypothetical protein EMIHUDRAFT_74244 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 142.1 bits (357), Expect = 3.200e-30 Identity = 84/222 (37.84%), Postives = 115/222 (51.80%), Query Frame = 0 Query: 124 NKPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPS-QESCITITTHAADLRAFLKSTFPPSSL-PPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIGKRQGG 344 + PP+LF+HGSFH +WCW F + G +C+A+S RGTS SP+ + ++ + I H +DL AF+ SS PP+++GHSFG SVPPSGN MT RF++R A +V GF K+AAR + R LFF + + + R A DS GI++ DF K LPS +AD G+ W+ P LVIG G Sbjct: 53 SSPPVLFVHGSFHGAWCWERWMGRFAASLGCECHAVSLRGTSGSPTGNCRQRSVKIEEHVSDLAAFVDGPLAASSAGPPVLVGHSFG-----GASVLKYLEAGHAASAAVLLCSVPPSGNSAMTLRFVRRSPAAAWLLVRGFAFKEAARSSSVARRLFFDDEMGEEEVEAHVARFAADSRCGINLSDFNKALPSRQAD-AVGRATWLATAPPALVIGAEADG 268
BLAST of NO02G01330 vs. NCBI_GenBank
Match: OAE32237.1 (hypothetical protein AXG93_1089s1020 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 142.1 bits (357), Expect = 3.200e-30 Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 0 Query: 127 PLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPPSSLPPIVIGHSFG--------XXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGI-DVKDFLKELP 315 PLLF+HGS H++WCW+ H++PFFS RG+DCYA+S G S P ++ +HA D+ ++S F + PP++I HSFG S PPSGNGPM RF+KRDL+ ++KI LGF AK +CR+ FF+ +P + L+ Y+E + + S + I DV+ K LP Sbjct: 119 PLLFVHGSSHAAWCWTYHWMPFFSARGYDCYAVSLLGQGASDVPQAAVAGSLDSHAKDIAHLIRSKF---TAPPVIIAHSFGGLVMQWFLSNTGRNSTSEESDGICPRPAGVVLACSSPPSGNGPMVTRFMKRDLIASIKITLGFAAKMVGSSRSICRDCFFSADIPESELKEYQELVKRSSRLPILDVRALNKSLP 312
BLAST of NO02G01330 vs. NCBI_GenBank
Match: PTQ46630.1 (hypothetical protein MARPO_0010s0040 [Marchantia polymorpha]) HSP 1 Score: 142.1 bits (357), Expect = 3.200e-30 Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 0 Query: 127 PLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPPSSLPPIVIGHSFG--------XXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGI-DVKDFLKELP 315 PLLF+HGS H++WCW+ H++PFFS RG+DCYA+S G S P ++ +HA D+ ++S F + PP++I HSFG S PPSGNGPM RF+KRDL+ ++KI LGF AK +CR+ FF+ +P + L+ Y+E + + S + I DV+ K LP Sbjct: 119 PLLFVHGSSHAAWCWTYHWMPFFSARGYDCYAVSLLGQGASDVPQAAVAGSLDSHAKDIAHLIRSKF---TAPPVIIAHSFGGLVMQWFLSNTGRNSTSEESDGICPRPAGVVLACSSPPSGNGPMVTRFMKRDLIASIKITLGFAAKMVGSSRSICRDCFFSADIPESELKEYQELVKRSSRLPILDVRALNKSLP 312
BLAST of NO02G01330 vs. NCBI_GenBank
Match: XP_015691421.1 (PREDICTED: uncharacterized protein LOC102713353, partial [Oryza brachyantha]) HSP 1 Score: 141.7 bits (356), Expect = 4.200e-30 Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 0 Query: 125 KPPLLFLHGSFHSSWCWSEHFLPFFSIRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPPSSLPPIVIGHSFGXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPSGNGPMTGRFLKRDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDSVVGI-DVKDFLKELPSLKADEKT 323 +PPL+F+HGSFH++WCW+EH+LPFFS G CYA+S R S PS++ T+ TH D+ F++ SLPP++IGHSFG SVPPSGN + R+L + A+K+ L AK+ A LC+E FF+P + L++RY+ + S + + D++ LP +KT Sbjct: 19 RPPLVFVHGSFHAAWCWAEHWLPFFSRAGFPCYALSLRAQGESSIPSEKVAGTLETHTGDIADFIRKEI---SLPPVLIGHSFGGLIVQQYISCLQELLHPSLAGAVLICSVPPSGNSGLVWRYLLTKPVAAVKVTLSLAAKQYANSLSLCKETFFSPEMDDELVQRYQGLMKDSSKLPLFDLRKLNASLPVTSVPDKT 214 The following BLAST results are available for this feature:
BLAST of NO02G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01330 ID=NO02G01330|Name=NO02G01330|organism=Nannochloropsis oceanica|type=gene|length=3795bpback to top protein sequence of NO02G01330.3 >NO02G01330.3-protein ID=NO02G01330.3-protein|Name=NO02G01330.3|organism=Nannochloropsis oceanica|type=polypeptide|length=375bpback to top protein sequence of NO02G01330.2 >NO02G01330.2-protein ID=NO02G01330.2-protein|Name=NO02G01330.2|organism=Nannochloropsis oceanica|type=polypeptide|length=348bpback to top protein sequence of NO02G01330.1 >NO02G01330.1-protein ID=NO02G01330.1-protein|Name=NO02G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bpback to top Synonyms
Publications
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