NO02G01090, NO02G01090 (gene) Nannochloropsis oceanica

Overview
NameNO02G01090
Unique NameNO02G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4932
Alignment locationchr2:345186..350117 -

Link to JBrowse

Properties
Property NameValue
DescriptionMalate synthase a
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:345186..350117 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004474malate synthase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006097glyoxylate cycle
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011076Malate_synth-like
IPR006252Malate_synthA
IPR001465Malate_synthase
Homology
BLAST of NO02G01090 vs. NCBI_GenBank
Match: EWM30541.1 (malate synthase a [Nannochloropsis gaditana])

HSP 1 Score: 1265.8 bits (3274), Expect = 0.000e+0
Identity = 634/780 (81.28%), Postives = 689/780 (88.33%), Query Frame = 0
Query:    1 MESTFKLHPLPKVALEALQAAASADGCPEGLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLS---AEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPS-APHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPTGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEVYSTALNEERGMWSKVCKSVPPLQPDTLADKHFRVAKTILMILMTNNRCIEFIPDLAYPFLLDPVREDEALWAKVEEGLKEYADPMTKYVV 777
            MESTFKLHPLP+V LEALQAA+S +GCPEG+ IVGGLTEEQ++LLT +ILTHVRDLVRTERTFSPNLEGLMALRRARQEEIY NIL K+PA+SFPA TQ IRDGDWKSET RP NM+DRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKD RPNSKTVLKGRLSP DL PFSS+ + TF ALQ  GVLN HGRITDLLCEP + L       VTD K L+ FLRERRPATIQVRVRGLHMLEGH LVDG PVSAPLLDFAVFVATCH PL AM+AQPTLYLPKME R ET WW+KVFAA A QLGIP KAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNF+KRLTLPKSL ANL P  +PNN EL+ + APHRR+LLPDNAHTGMGVSFLEAYSNHTSQVNL RGFDSVGGMVTNIPTGD +ID KA AK+RVDKTNEAWKGDAGGWSGHPAFSPYVREPFD+VRALHRGLA+LA+ VGE K+RG IK   D A  ++A+A L+ S++V +G +E+ TLAA   ALE SLSLHVA+N  QYQ+GL RFI M+PPSP V DHELI VPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPL+L S  S+ LT  LL+QAM+EVY  AL++ERG+W  VCKSVPP+QPD+LA+KHFRVA+ +LMILMTN+RCIEFIPDLAYPFLLDPVRED+ LWA+VEEGL  YADPMT+YVV
Sbjct:    1 MESTFKLHPLPQVVLEALQAASSKEGCPEGMEIVGGLTEEQQSLLTLEILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYKNILEKRPAMSFPAETQTIRDGDWKSETHRPPNMADRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDVRPNSKTVLKGRLSPQDLEPFSSNADATFQALQEAGVLNGHGRITDLLCEPDFVLEENVTSTVTDLKGLDGFLRERRPATIQVRVRGLHMLEGHFLVDGKPVSAPLLDFAVFVATCHAPLAAMAAQPTLYLPKMESRHETAWWAKVFAAMAAQLGIPPKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFIKRLTLPKSLQANLSP--TPNNLELVGTHAPHRRYLLPDNAHTGMGVSFLEAYSNHTSQVNLRRGFDSVGGMVTNIPTGDPAIDKKAQAKLRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDIVRALHRGLAVLAKQVGEAKVRGTIKGPADPASIRQALADLVASISVENGGRESETLAAFLKALETSLSLHVAANAAQYQDGLLRFIRMEPPSPDVKDHELIEVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLMLSSSSSATLTPALLAQAMEEVYHAALHDERGLWGAVCKSVPPMQPDSLAEKHFRVARKVLMILMTNDRCIEFIPDLAYPFLLDPVREDDKLWAQVEEGLDAYADPMTRYVV 778          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: XP_005853468.1 (malate synthase [Nannochloropsis gaditana CCMP526] >EKU22892.1 malate synthase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1254.6 bits (3245), Expect = 0.000e+0
Identity = 634/795 (79.75%), Postives = 688/795 (86.54%), Query Frame = 0
Query:    1 MESTFKLHPLPKVALEALQAAASADGCPEGLAIVGGLTE---------------EQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLS---AEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPS-APHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPTGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEVYSTALNEERGMWSKVCKSVPPLQPDTLADKHFRVAKTILMILMTNNRCIEFIPDLAYPFLLDPVREDEALWAKVEEGLKEYADPMTKYVV 777
            MESTFKLHPLP+V LEALQAA+S +GCPEG+ IVGGLTE               EQ++LLT  ILTHVRDLVRTERTFSPNLEGLMALRRARQEEIY NIL K+PA+SFPA TQ IRDGDWKSET RP NM+DRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKD RPNSKTVLKGRLSP DL PFSS+ + TF ALQ  GVLN HGRITDLLCEP + L       VTD K L+ FLRERRPATIQVRVRGLHMLEGH LVDG PVSAPLLDFAVFVATCH PL AM+AQPTLYLPKME R ET WW+KVFAA A QLGIP  AIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNF+KRLTLPKSL ANL P  +PNN EL+ + APHRR+LLPDNAHTGMGVSFLEAYSNHTSQVNL RGFDSVGGMVTNIPTGD +ID KA AK+RVDKTNEAWKGDAGGWSGHPAFSPYVREPFD+VRALHRGLA+LA+ VGE K+RGAIK   D A  ++A+A L+ S++V +G +E+ TLAA   ALE SLSLHVA+N  QYQ+GL RFI M+PPSP V DHELI VPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPL+L S  S+ LT  LL+QAM+EVY  AL++ERG+W  VCKSVPP+QPD+LA+KHFRVA+ +LMILMTN+RCIEFIPDLAYPFLLDPVRED+ LWA+VEEGL  YADPMT+YVV
Sbjct:    1 MESTFKLHPLPQVVLEALQAASSKEGCPEGIEIVGGLTEMLMLYFLPLYSVTFKEQQSLLTLNILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYKNILEKRPAMSFPAETQTIRDGDWKSETHRPPNMADRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDVRPNSKTVLKGRLSPQDLEPFSSNADATFQALQDAGVLNGHGRITDLLCEPDFVLEENVTSNVTDLKGLDGFLRERRPATIQVRVRGLHMLEGHFLVDGKPVSAPLLDFAVFVATCHAPLAAMAAQPTLYLPKMESRHETAWWAKVFAAMAAQLGIPPMAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFIKRLTLPKSLQANLSP--TPNNLELVGTHAPHRRYLLPDNAHTGMGVSFLEAYSNHTSQVNLRRGFDSVGGMVTNIPTGDPAIDKKAQAKLRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDIVRALHRGLAVLAKQVGEAKVRGAIKGPADPASIRQALADLVASISVENGGRESETLAAFLKALETSLSLHVAANAAQYQDGLLRFIRMEPPSPDVKDHELIEVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLMLSSSSSATLTPALLAQAMEEVYHAALHDERGLWGAVCKSVPPMQPDSLAEKHFRVARKVLMILMTNDRCIEFIPDLAYPFLLDPVREDDKLWAQVEEGLDAYADPMTRYVV 793          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_015145455.1 (malate synthase A [Pleurocapsa minor] >AFY79157.1 malate synthase A [Pleurocapsa sp. PCC 7327])

HSP 1 Score: 223.4 bits (568), Expect = 2.500e-54
Identity = 177/630 (28.10%), Postives = 260/630 (41.27%), Query Frame = 0
Query:   30 GLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIP-TGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWL 659
            G+ ++G ++ E   +LT + L  +  L   +R F    E L+ LR   Q++    IL       FPA T+AIR+GDWK     P ++ DR  E T P+    M I+ LNS A +   D EDS +P   N+++G   + +AV  TI                                                            G TD+K+ + +    + A + VR RG H+LE HVLVDG P+S  L DF ++       L      P  YLPK+E R+E   W++VF A  + LG+P   I++T ++ETI AS E +E+ Y LR+H +G N GR+DY+F+F+K+         N P                  F+LPD     M   F+ +YS    +    RG  ++GGM   IP   D + +  A AK+R DK  E   G  G W  HPA  P  RE FD             Q+ G ++L                 + LL+ + + +                                                  +L+A+P       K T  GL+  +R+ + Y  +++ G GC+ L  + ED ATAE  R  VWQWL
Sbjct:   16 GVNLLGKVSAEYAEILTKEALEFIAML---QRRFGAEREQLLKLREYAQQQFDAGILP-----DFPAETEAIRNGDWKI-APIPQDLLDRRVEITGPT-DRKMVINALNSGANAFMADFEDSNSPTWDNMVSGQINLRDAVNRTI------------------------------------------------------------GFTDSKTGKEYKLNEKTAVLIVRPRGWHLLESHVLVDGRPMSGSLFDFGLYFFHNACKLIENGTGPYFYLPKLENRYEAALWNQVFVAAQEALGLPIGTIKATVLLETILASFEMDEILYELRDHIVGLNCGRWDYIFSFIKKF-------RNRPD-----------------FVLPDRNEVTMTCHFMRSYSRLVIKTCHRRGAFAMGGMAAQIPIKNDPAANEAAFAKVRADKEREVGDGHDGTWVAHPALVPIAREVFD------------RQMTGPNQL-----------------SVLLNDITITA-------------------------------------------------EDLLAIPR-----GKITEGGLRNNIRVGILYLTAWLAGNGCVPLYNLMEDAATAEICRAQVWQWL 468          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_073598632.1 (malate synthase A [Hydrococcus rivularis] >OKH25222.1 malate synthase A [Hydrococcus rivularis NIES-593])

HSP 1 Score: 217.6 bits (553), Expect = 1.300e-52
Identity = 175/630 (27.78%), Postives = 258/630 (40.95%), Query Frame = 0
Query:   30 GLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIP-TGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWL 659
            G+ ++G ++ E   +LT + L  +  L   +R F    E L+ LR   Q++    IL       FPA T+AIR+GDWK     P ++ DR  E T P+    M I+ LNS A +   D EDS +P   N+++G   + +AV  TI                                                              TD+K+ + +    + A + VR RG H+ E HVLVDG P+S  L DF ++       L      P  YLPK+E R+E   W++VF A  + LG+P   I++T ++ETI AS E +E+ Y LR+H +G N GR+DY+F+F+K+         N P                  F+LPD     M   F+ +YS    +    RG  ++GGM   IP   D + +  A AK+R DK  E   G  G W  HPA  P  RE FD             Q+ G ++L                 + LL+ + + +                                                  +L+A+P       K T  GL+  +R+ + Y  +++ G GC+ L  + ED ATAE  R  VWQWL
Sbjct:   16 GVNLLGKVSAEYAEILTKEALEFIAML---QRRFGGERERLLKLREYAQQQFDAGILP-----DFPAETEAIRNGDWKI-APIPQDLLDRRVEITGPT-DRKMVINALNSGANAFMADFEDSNSPTWDNMVSGQINLRDAVNRTI------------------------------------------------------------DFTDSKTGKEYKLNEKTAVLIVRPRGWHLPESHVLVDGRPMSGSLFDFGLYFFHNAHKLIENGTGPYFYLPKLENRYEAALWNQVFVAAQEALGLPIGTIKATVLLETILASFEMDEILYELRDHIVGLNCGRWDYIFSFIKKF-------RNRPD-----------------FVLPDRNEVTMTCHFMRSYSRLVIKTCHRRGAFAMGGMAAQIPIKNDPAANEAAFAKVRADKEREVGDGHDGTWVAHPALVPIAREVFD------------RQMTGPNQL-----------------SVLLNDITITA-------------------------------------------------EDLLAIP-----KGKITEGGLRNNIRVGILYLTAWLAGNGCVPLYNLMEDAATAEICRAQVWQWL 468          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_074311447.1 (malate synthase A [Micromonospora cremea] >SIM84990.1 malate synthase [Micromonospora cremea])

HSP 1 Score: 216.1 bits (549), Expect = 3.900e-52
Identity = 180/638 (28.21%), Postives = 255/638 (39.97%), Query Frame = 0
Query:   28 PEGLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPT-GDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPL 665
            P G+ + G +      +LTP+ LT + DL    R F P    L+ALRR R+ E+    L     + F   T+ IR+ DW+     P  + DR  E T P+  A M I+ LNS A     D+ED+  PL  NV++G   + +A+ G +    P  K                                                            +  L + + ATI VR RG H+ E H+LVDG   S  L+DF +++  C        A P  YLPKME   E   W+ VF A  ++L IP   IR+T +IET  A+ E +E+ Y LREHS G N GR+DY+F+ +K+     +                        FLLPD     M V F+ AY+    +    RG  ++GGM   IP+  D  ++  A AK+R DKT EA  G  G W  HP   P  RE FD V                                      L D  N    +++   + A                                        +L++V A   TP   +  GL+  + + + Y AS++ G+G +A+  + ED ATAE +R  VWQWL  D  L
Sbjct:    4 PAGIEVTGPMHPRYDEILTPEALTFLADL---HRAFDPRRRDLLALRRQREAELADGGL-----LDFLPETREIREADWRVAEPAP-GLVDRRVEITGPT-DAKMTINALNSGAKVWLADHEDANTPLWENVISGQLNLRDAIDGKLAFTSPEGK------------------------------------------------------------QYALHDGQLATIVVRPRGWHLTEKHILVDGERTSGSLVDFGLYLFHCARRQIDRGAGPYFYLPKMESHLEARLWNDVFLAAQERLDIPRGTIRATVLIETFPAAFEMDEILYELREHSAGLNAGRWDYMFSVIKKFRTRGA-----------------------DFLLPDRNAVTMTVPFMRAYTELLVRTCHRRGAHAIGGMAAFIPSRRDPQVNETALAKVRDDKTREAGDGFDGSWVAHPDLVPICREVFDTV--------------------------------------LGDRPNQLDRTRDDVRVTAA---------------------------------------DLLSVRA---TPGPHSETGLRNAVSVGVQYLASWLRGSGAVAIFNLMEDAATAEISRSQVWQWLHNDLTL 468          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_002612925.1 (malate synthase A [Stigmatella aurantiaca] >EAU67570.1 malate synthase A [Stigmatella aurantiaca DW4/3-1] >ADO74952.1 Malate synthase [Stigmatella aurantiaca DW4/3-1])

HSP 1 Score: 215.3 bits (547), Expect = 6.700e-52
Identity = 181/630 (28.73%), Postives = 257/630 (40.79%), Query Frame = 0
Query:   30 GLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIP-TGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWL 659
            G+ + G  + +   +LTP+ L  V  LV   R F    E L+A R+ RQ         ++P   F   T+AIR+GDWK+    P ++ DR  E T P     M I+ LNS A     D EDS +P   NV+ G   + +AV GTI                             T++A        E+G+                         +    +PA + VR RG H+ E H+ VDG PV   L DF +F         A    P  YLPK+E   E   W+ VF    ++LG+P   +++T +IET+ A+ E EE+ Y LREHS G N GR+DY+F+F+K+L    +                        FLLPD     M  +FL+AYS    Q    RG  ++GGM   IP  GDA+ +    AK+R DK  E   G  G W  HP      RE FD            A + G ++L                                        G L + +                           V + EL+AVP+   T +     GL+  +R+ + Y A+++ G+GC+ L  + ED ATAE +R  VWQW+
Sbjct:   16 GVVLHGAWSPDYAPVLTPEALEFVAKLV---RAFGETREVLLAQRQERQRAFQR---GERP--HFLPETKAIREGDWKA-APLPKDLLDRRVEITGPV-DRKMIINALNSGANVFMADFEDSNSPTWDNVVRGQLNLMDAVRGTI-----------------------------TYTA--------ENGK------------------------HYALHEKPAVLFVRPRGWHLPERHLEVDGKPVPGSLFDFGLFFFHNAKAQLARGTGPYFYLPKLESHREARLWNDVFLLAQRELGLPTGTLKATVLIETLPAAFEMEEILYELREHSAGLNCGRWDYIFSFIKKLQADPA------------------------FLLPDRGQVTMDKAFLDAYSRRLIQTCHRRGVHAMGGMAAFIPIKGDAAANEAVLAKVRADKLREVKNGHDGTWVAHPGLVSVAREVFD------------AHMKGPNQL----------------------------------------GTLRQDVK--------------------------VGEAELLAVPSGTRTEE-----GLRHNIRVGVQYMAAWMGGSGCVPLYNLMEDAATAEISRAQVWQWI 467          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_089020294.1 (malate synthase A [Micromonospora coriariae] >SCF05796.1 malate synthase [Micromonospora coriariae])

HSP 1 Score: 215.3 bits (547), Expect = 6.700e-52
Identity = 182/638 (28.53%), Postives = 253/638 (39.66%), Query Frame = 0
Query:   28 PEGLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPT-GDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPL 665
            P G+ + G +      +L+P+ L  + DL    R F P    L+ALRR R+ E+    L     + F   T+ IR+ DW+     P  + DR  E T P+  A M I+ LNS A     D+ED+  PL  NV++G   + +A+ G +    P  K                                                               L +   ATI VR RG H+ E H+LVDG   S  L+DF ++   C        A P  YLPKME   E   W+ VF A  ++LGIP   IR+T +IET  A+ E +E+ Y LREHS G N GR+DY+F+ +K+                   AE         FLLPD     M V F+ AY+    +    RG  ++GGM   IP+  D  ++  A AK+R DKT EA  G  G W  HP   P  RE FD                                      A L D  N    ++E   + A                                        +L++V A   TP   +  GL+  + + + Y AS++ G+G +A+  + ED ATAE +R  VWQWL  D  L
Sbjct:    4 PAGVEVTGPMHPRYDEILSPEALAFLADL---HRAFDPRRRELLALRRQREAELANGGL-----LDFLPGTREIREADWRVAEPAP-GLIDRRVEITGPT-DAKMTINALNSGAKVWLADHEDANTPLWENVISGQLNLRDAIDGKLAFTSPEGK------------------------------------------------------------HYALHDGELATIVVRPRGWHLTEKHILVDGERTSGSLVDFGLYFFHCARRQLDRGAGPYFYLPKMESHLEARLWNDVFLAAQERLGIPRGTIRATVLIETFPAAFEMDEILYELREHSAGLNAGRWDYMFSVIKKF--------------RTRGAE---------FLLPDRNAVTMTVPFMRAYTELLVRTCHRRGAHAIGGMAAFIPSRRDPQVNETALAKVRDDKTREAGDGFDGSWVAHPDLVPICREVFD--------------------------------------AVLGDRPNQLDRTREDVRVVAA---------------------------------------DLLSVGA---TPGPHSETGLRNAISVGVQYLASWLRGSGAVAIFNLMEDAATAEISRSQVWQWLHNDLTL 468          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_030447968.1 (malate synthase A [Actinocatenispora sera])

HSP 1 Score: 214.5 bits (545), Expect = 1.100e-51
Identity = 187/670 (27.91%), Postives = 261/670 (38.96%), Query Frame = 0
Query:   28 PEGLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPT-GDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEV---YSTALNE 694
            P+G+A+ G + +    +L+P  L  V +L    R F      L+A R  +Q  ++         + FPA    +R GDW+     P  + DR  E T P+  A M I+ LNS A     D ED+  PL  N++ G   + +A+ GT+    PN K    G                                                            ER+P TI VR RG H+ E HV VDG  VS  L DFA+++  C          P  YLPKME   E   W+ VFA     LG+P   IR+T +IETI A+   EE+ Y LR HS G N GR+DYLF+ +K+                         +    FLLPD     M   F+ AY+    +    RG  ++GGM   IP+  D  ++  A AK+R DKT EA  G  G W  HP   P  RE FD                      G + E  +  G  +      D V+                                                 V   +L+ V A   TP   T  GL+  + + L Y A+++ G+G + +D + ED ATAE +R  VWQWL  D  L      +  L   +L++ +D +   Y  A +E
Sbjct:    7 PDGVAVTGPVLDRYEQVLSPAALALVAEL---HRRFDQRRRELLAARTEQQRRLHAG-----GTLEFPAEAAQVRGGDWRVAPPAP-GLVDRRVEITGPT-DAKMTINALNSGAQVWLADFEDANTPLWENMVGGQLNLRDALTGTLSFTGPNGKRYELG------------------------------------------------------------ERQP-TIVVRPRGWHLPEKHVTVDGERVSGSLFDFALYLVNCGRLQLDRGLGPYYYLPKMESHLEARLWNDVFAHAESTLGMPTGTIRATVLIETIPAAFCMEEILYELRAHSAGLNAGRWDYLFSIIKKF-----------------------RSRGAAFLLPDRNAVTMTAPFMRAYTELLVRTCHKRGAHAIGGMAAFIPSRRDPQVNETALAKVRDDKTREAGDGFDGSWVAHPDLVPVCREVFD----------------------GVLGEAPNQLGRTR------DEVS-------------------------------------------------VTPEQLLNVAA---TPGDKTLDGLRNAVGVGLRYLAAWLRGSGAVGIDNLMEDAATAEISRSQVWQWLHNDVTLAGGEKVTRALVEQILAEQLDAIRAGYGEAYDE 502          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_036518448.1 (malate synthase A [Nocardioides sp. J54])

HSP 1 Score: 214.5 bits (545), Expect = 1.100e-51
Identity = 186/691 (26.92%), Postives = 273/691 (39.51%), Query Frame = 0
Query:   28 PEGLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPT-GDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEVYSTALNEERGMWSKVCKSVPPLQPDTLADKH 718
            P  + I GG  E    +LTP  L  V  L   +  F    + L+A RR R+EE+      +   + F   T  +R GDW +    PA++ DR  E T P+    M I+ LNS A     D ED+  P  +NV+ G   +Y+A+   I    P  KT                                                          LE   +++R ATI +R RG H  E H+LVDGTPV   L+DF ++       L    + P  YLPKME   E   W+ VF     +LG+P  ++R+T +IETI A+ E +E+ Y LR+H  G N GR+DYLF+ +K               S P             F+LPD A  GM   F+ AY+    +    R   ++GGM   IP+  D  ++ +A AK+R DK  EA  G  G W  HP   P  RE FD                                      A L D  N     ++   + A                                        +L+ V +   TP + T AGL+  + +AL Y  +++ G G + +  + ED ATAE +R  +WQW+  +  L       + +T  L+ Q +DE  +  L +  G   +  ++    +   LAD++
Sbjct:    3 PVDIQIAGGEVERGAEILTPDALAFVAQL---QERFGARRDELLAARRTRREEV-----ARTGRLDFLPETADVRAGDW-TVAPAPADLQDRRVEITGPT-DRKMTINALNSGARVWLADMEDASTPHWSNVVGGQVNLYDAIRRQISFTSPQGKTY--------------------------------------------------------ELE---QDQRLATIVMRPRGWHFDEQHLLVDGTPVVGALVDFGLYFFHNARELLERGSGPYFYLPKMESHLEARLWNDVFTFAQAELGVPHGSVRATVLIETIPAAFEMDEILYELRDHVSGLNAGRWDYLFSIIKYFR-----------DSGP------------EFVLPDRASVGMTSPFMRAYAQLLVKTCHRRNAQAIGGMAAFIPSRKDEEVNARAFAKVREDKEREAGDGFDGSWVAHPDLVPVCREVFD--------------------------------------AVLGDRPNQVERQRDDVEVTA---------------------------------------DDLLDVAS---TPGEITAAGLRDNVEVALLYLEAWLRGLGAVGIHNLMEDAATAEISRSQIWQWVRNESKL----DDGTVVTADLVRQVLDEEVAKILADAEGTEHRFEEARRIFEEVALADEY 517          
BLAST of NO02G01090 vs. NCBI_GenBank
Match: WP_093518954.1 (malate synthase A [Stigmatella erecta] >SET76976.1 malate synthase [Stigmatella erecta])

HSP 1 Score: 214.2 bits (544), Expect = 1.500e-51
Identity = 182/630 (28.89%), Postives = 250/630 (39.68%), Query Frame = 0
Query:   30 GLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIP-TGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWL 659
            G+ + G    +   +LTP+ +  V  LV   R F    E L+A R+ RQ+        ++P   F   T+AIR+GDWK+    P ++ DR  E T P     M I+ LNS A     D EDS +P   N + G   + +AV GTI     N K                               LNE                                 +PA + VR RG H+ E H+ VDG PV   L DF +F              P  YLPK+E   E   W+ VF    ++LG+P   I++T +IET+ A+ E +E+ Y LREHS G N GR+DY+F+F+K+L    +                        FLLPD     M  +FL+AYS    Q    RG  ++GGM   IP  GDA+ +    AK+R DK  E   G  G W  HP      RE FD            A + G ++L                                                            G AR      P   V + EL+AVP     P   T  GL+  +R+ + Y A+++ G+GC+ L  + ED ATAE +R  VWQW+
Sbjct:   16 GVVLRGAWLPDYAPVLTPEAVAFVATLV---RAFGKTREALLAQRQERQKAFQR---GERP--HFLPETKAIREGDWKA-APLPKDLLDRRVEITGPV-DRKMIINALNSGANVFMADFEDSNSPTWDNGVRGQLNLMDAVRGTITYTAENGKHY----------------------------ALNE---------------------------------KPAVLFVRPRGWHLPERHLEVDGQPVPGSLFDFGLFFFHNAKAQLERGTGPYFYLPKLESHREARLWNDVFLLAQRELGLPPGTIKATVLIETLPAAFEMDEILYELREHSAGLNCGRWDYIFSFIKKLQADPA------------------------FLLPDRGQVTMDKAFLDAYSRRLIQTCHRRGVHAMGGMAAFIPIKGDAAANDAVLAKVRADKLREVTNGHDGTWVAHPGLVAVAREVFD------------AHMKGPNQL------------------------------------------------------------GTAR------PDAQVGEKELLAVP-----PGTRTEEGLRHNIRVGVQYMAAWMGGSGCVPLYNLMEDAATAEISRAQVWQWI 467          
The following BLAST results are available for this feature:
BLAST of NO02G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30541.10.000e+081.28malate synthase a [Nannochloropsis gaditana][more]
XP_005853468.10.000e+079.75malate synthase [Nannochloropsis gaditana CCMP526]... [more]
WP_015145455.12.500e-5428.10malate synthase A [Pleurocapsa minor] >AFY79157.1 ... [more]
WP_073598632.11.300e-5227.78malate synthase A [Hydrococcus rivularis] >OKH2522... [more]
WP_074311447.13.900e-5228.21malate synthase A [Micromonospora cremea] >SIM8499... [more]
WP_002612925.16.700e-5228.73malate synthase A [Stigmatella aurantiaca] >EAU675... [more]
WP_089020294.16.700e-5228.53malate synthase A [Micromonospora coriariae] >SCF0... [more]
WP_030447968.11.100e-5127.91malate synthase A [Actinocatenispora sera][more]
WP_036518448.11.100e-5126.92malate synthase A [Nocardioides sp. J54][more]
WP_093518954.11.500e-5128.89malate synthase A [Stigmatella erecta] >SET76976.1... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006721NSK006721Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01090.1NO02G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573810gene_690Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g96gene122Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01090.1NO02G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01090 ID=NO02G01090|Name=NO02G01090|organism=Nannochloropsis oceanica|type=gene|length=4932bp
AGGGGATGTGCTTTGCTTTTATTGTTCTCTGGATCGATTTAACCCAGTCG
GTATTAAACAGGAGGAAAGAGGTACTTGTTTATGTCTAGTACACGGCTGC
CTTCGATAATTTGCTTGGCGACGTTGCGTTTCTCCTCTATCTACTTACAT
TCTTTGTCATGCAGTCTTTTTATTTTCCTTATCTGGAGTCAAAGTCGTTT
TTTGGGGGGGCTTTGGACTTCGAGCTGGCAGCAGCACTCGCAGTCCTCTT
AGGAGCTGTTGTTGTCTTCGTCGCCCTTACCCCTGACGCCTTTTTTTTTG
CCTTGCCTCCGTCTTCCCCCACCGCTGCCGCAGCTATATTCCTCTCCTTC
GATTTTTTTGGCTCTCCCATCGGTGGAGCCGCCTCCGGGAACCTCCTCGC
AAACTCACTTATCACCCTCTCCTCCTCCCTCACCATCTCCTCATACTCCT
TCTCTGTCTCGTGATCATACCCAAGCAAATGCAAAAGTCCATGAATCACC
AAAAAGGGCAGCCGACCCTGGACGTCATATACCCTCGCCATAGCCCCCGA
GGCCCCCCTTTCCTCGGACCACTGATTCTCCCCCTCCGCGGCCCAATCCG
CCTCATCCCGGGCACATTGCCGTTGCACGTATCCAGTCGACACCATCATA
TCCCCCAAATCTTTTATCTGTCCATTCAATGCCACTGATTCTGGTGTGGG
TACGCCAGGAGACTTATATTCGTGGAAGGGGAAAGATAGAATATCCGTCG
CAGAGCGTTTCCCCCTGTAACGGTCATTGTACTCGCGGATACTGCGGTCG
TTGGTCAACCAAAGAGAAACATCATGGTCATCTTTGCCGATGATTTCCAT
GATCCCACGTATATGATTGTGCAAGACATCTATGTCCAAGGAGATGCTTC
TTTGGGAATTCCGGATTTGAATCGTGCCGAGGTTGTCGTCGCTCTCTGCC
TCGTCTTGACTGGAGGAAGAGGAGGACATGGAGGAGGGAAGGCCATGCTT
GCGGTCCATGGCATCGATCTTTACGGCGTTGCTGTCATCGTTGTCATCGT
CGTCATCGCTATCGTCATTTCCCGAAAGGTCCTCCTCAGCGTTATCTTCC
TTGTCACCATCCTCATCTTCGTCCTCGTCTTCGTCGTCGTCATCCTCCTC
CTTATCATCTTCACCTTCCAATGCCCCCGTCCTTTCCATCTGACTCATCA
TACGCTGCCACACCGCATCCATAGCCTCACCGCTTTGCATCACTTTTAGC
AACTCTGCCTCGGTCATCTCATCCTCGTCGTCCTCCTCGTCCTCAATCAC
CTTCTTGACCGATGCCTTTGATTTTAACGAGGCTGCCTTTTTCTTCTTCC
CAGCACCTGATGAGGCGGTCGAGGATGCAAAGAGTGCCGTGTTGGTGGGC
GGCATAAACGGAGAACGGTGGCGGTGAAAAGAGCTTAATCTGGCTGTCGT
CACCGTCACCGATGAAGAAGCAAAAGACGAGGATGAGGATGAAGAGGAGT
AGGAGAGGGAGGAGAGGGGTGAGGTCCACGTCGAAAAAGATCCCATGGCA
CGGCGCATATGTGTGGGAACGATGATACCACGCTGAAAACCGAACGCTTC
TCTTGTCACGGTGCACAGGAGAATTAGCACCATCGGGCTTGAGGAGAAGG
GGAAGCGCTGTGGCATGGACAGCTACTAGTCGTATCCGACTAGTCGTATC
CGAAGGGGAATGCAGCGGCCTCTAGACGTCTTTGATAAACAGGCTGGCTG
GGGTGTGACTACTCAAGGCTATTATTCCTTTGCGACTGTATGGCTGTGCG
ATGTAGACATGATGAGGATGTGTGAGTTCAACGCAAGGACAGAGAGTGCC
AGAACGACCTCCTCTCTCACACGAATGGCTGGACAGCTGCTTCAAAGTTC
AAGCAGCCTTTCCATACATTTGTTTGCCCCACGTGCTTTCGCACACCGCC
CCAATAGTCTCAAACCCTCTTCTTGGGCTGTCGACAATGTCCTGCTTGCT
CATTTGGAACTCCGCACTTATTCTCGTTACTTATCCCAACCACACATAGC
ACCACCAAGGTAGGCAGCAGCCACTACTCTCGCTCTTCTCTTAACCCAAG
ATGGAGTCGACATTCAAGCTTCATCCCTTGCCCAAGGTGGCCCTGGAGGC
CCTGCAAGCCGCGGCATCGGCCGACGGCTGTCCGGAGGGTCTGGCCATTG
TCGGAGGTCTGACGGAGgtgagcggttggtgatggggtgggtggattagg
gaagggagaagggagacagaacaaaggctaagttgaagatgaaatgggag
gcgccaggccgctgcgtttccatccacggcatgttttgtgagagcacgag
tgtgtagctcacaaagcacaggcatactgttgctcacggtggactgagcc
tgtgtcgctttgtcaatcgcggtatccaccatgaaccccgtccaaccacc
ccacaaagggcaaggcgctcgcttccttggaagaagagcatgtgaggtgt
gatgttcggtctgtatctactcagtacgccatttttgtctaacaattctc
aatctggagtatttcagcaaaatatttttccccccccaatttctccctaa
attccctcacgcccaacctctcacgtcattcccccccgccccacgcaccc
acaaaatagGAGCAACGCACGCTCCTCACTCCCCAAATTCTGACGCATGT
CCGCGACCTCGTCCGCACCGAACGGACATTCTCCCCCAATCTCGAAGGCC
TCATGGCCCTCCGCCGCGCGCGTCAAGAGGAGATCTACACTAACATCCTC
AACAAGAAGCCGGCCATCTCCTTCCCCGCTGCCACTCAAGCAATTCGCGA
CGGGGACTGGAAGAGCGAGACCGATCGCCCCGCCAACATGTCTGACCGGG
CGTGCGAGAACACCCATCCAAGCCGCGCGGCAAATATGGCCATCCACGGA
TTGAACAGTAAGGCGGCGTCTGATTTCATGGATAACGAGGACTCCCAAGC
CCCTCTCAAGGCCAATGTGCTGGCAGGATACCGAACGATCTACGAGGCGG
TTTGTGGGACCATCAAGGACGATCGACCCAACTCCAAAACTGTGTTAAAG
GGTCGCTTGTCTCCGAATGACCTCTCCCCTTTCTCTTCCGATGTCAACGT
GACTTTTTCCGCCCTCCAGGCCAAGGGGGTCTTGAACGAGCATGGACGCA
TCACTGACCTGCTCTGCGAGCCTTCCTGGACGTTGAGTGCTGAGGGGGTG
ACGGATGCGAAGAGTCTCGAGGCTTTCTTGCGGGAGCGGCGTCCGGCGAC
GATCCAAGTGAGAGTGAGGGGGCTGCATATGTTGGAGGGGCATGTGCTGG
TGGACGGTACCCCGGTCTCGGCGCCTTTGCTTGACTTTGCGGTGTTTGTC
GCGACCTGTCATGGACCGTTGAAAGCAATGAGCGCGCAACCGACATTGTA
CTTGCCCAAGATGGAGGGTCGCTTCGAGACGGAGTGGTGGAGCAAGGTCT
TCGCGGCCTATGCCAAGCAGCTGGGTATCCCCGCCAAGGCCATCAGGTCC
ACTACAATGATTGAGACTATCACCGCTAGCATGGAGAAGGAGGAGATGAA
CTACACCCTCCGCGAGCACTCCCTAGGGCAGAATAAGGGTCGATACGACT
ACTTATTCAACTTTGTCAAGCGCTTGACTCTCCCCAAATCCCTCCATGCC
AATCTCCCTCCCTCCTCTTCCCCCAACAACGCCGAGCTCCTTCCCTCCGC
CCCCCACCGTCGCTTCCTTCTTCCTGACAATGCGCATACTGGCATGGGAG
TTTCATTCCTCGAGGCCTACTCGAATCACACCTCTCAAGTCAATCTGAAC
CGAGGCTTTGACTCGGTGGGAGGGATGGTGACCAACATTCCTACCGGGGA
CGCGTCTATTGACGGCAAGGCCCACGCCAAGATCAGGGTGGACAAGACGA
ATGAGGCCTGGAAGGGCGACGCAGGGGGATGGAGCGGACACCCGGCATTC
AGCCCTTATGTCCGAGAGCCTTTCGATGTGGTGCGGGCGTTGCACAGGGG
CCTGGCCTTGTTGGCGCAGCTGGTGGGGGAGGACAAGCTCCGGGGGGCGA
TCAAGGAGGGGAAAGACGCGGCAGGAAGCCAGAAGGCGGTGGCTGCGTTG
CTGGACTCGGTGAATGTTGCGAGTGGAAGCAAGGAGGCCGCGACGTTGGC
GGCGTTGTCGGGGGCGCTGGAGAAGTCGTTGTCTCTGCATGTGGCGTCGA
ATGTGAGGCAGTACCAAGAGGGCCTGGCTCGATTCATTAATATGGATCCG
CCCTCCCCCCCCGTGAATGACCACGAGCTTATCGCTGTGCCCGCCGACCA
GCACACCCCCGATAAGTTTACCTATGCCGGCCTTAAGCAATACCTCCGCC
TCGCCCTCTTCTATACCGCCAGCTTCATCCACGGCACGGGTTGCATTGCC
CTCGACGGGGTCTTCGAGGATCTGGCCACCGCGGAGAAGGCCCGCGTCAA
CGTTTGGCAATGGCTCACCCTCGACCAACCCCTCCTTCTCCCCTCTGGCA
AGTCCTCCCCCCTCACCTTTACCCTCCTCTCCCAAGCCATGGATGAGGTC
TACTCGACTGCCCTGAACGAGGAACGTGGCATGTGGAGCAAAGTCTGCAA
GTCCGTCCCGCCCCTCCAACCCGACACCTTGGCCGACAAACACTTCCGGG
TAGCCAAGACAATTCTCATGATTCTGATGACGAACAACCGGTGCATTGAG
TTTATTCCGGATCTTGCCTATCCCTTCCTCCTTGACCCTGTCAGGGAGGA
TGAGGCGTTGTGGGCCAAGGTAGAGGAAGGGTTGAAAGAGTATGCGGACC
CGATGACCAAATATGTTGTTAAGGAACTAAAAGCCTGACTATAGTAGAAC
GGAGGAGTGGGGGGGGGGGGAGGGAGGGAGGG
back to top

protein sequence of NO02G01090.1

>NO02G01090.1-protein ID=NO02G01090.1-protein|Name=NO02G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bp
MESTFKLHPLPKVALEALQAAASADGCPEGLAIVGGLTEEQRTLLTPQIL
THVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQA
IRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNED
SQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSD
VNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERR
PATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQP
TLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKE
EMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELL
PSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIP
TGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRAL
HRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAA
TLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVP
ADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKA
RVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEVYSTALNEERGMWSK
VCKSVPPLQPDTLADKHFRVAKTILMILMTNNRCIEFIPDLAYPFLLDPV
REDEALWAKVEEGLKEYADPMTKYVVKELKA*
back to top
Synonyms
Publications