NO02G01090.1, NO02G01090.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G01090.1
Unique Name	NO02G01090.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4490
Alignment location	chr2:345186..350117 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:345186..350117 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G01090.1 vs.
Match: EWM30541.1 (malate synthase a [Nannochloropsis gaditana])

HSP 1 Score: 1265.8 bits (3274), Expect = 0.000e+0
Identity = 634/780 (81.28%), Postives = 689/780 (88.33%), Query Frame = 0

Query:    1 MESTFKLHPLPKVALEALQAAASADGCPEGLAIVGGLTEEQRTLLTPQILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQAIRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSDVNVTFSALQAKGVLNEHGRITDLLCEPSWTLS---AEGVTDAKSLEAFLRERRPATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQPTLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELLPS-APHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIPTGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRALHRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAATLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEVYSTALNEERGMWSKVCKSVPPLQPDTLADKHFRVAKTILMILMTNNRCIEFIPDLAYPFLLDPVREDEALWAKVEEGLKEYADPMTKYVV 777
            MESTFKLHPLP+V LEALQAA+S +GCPEG+ IVGGLTEEQ++LLT +ILTHVRDLVRTERTFSPNLEGLMALRRARQEEIY NIL K+PA+SFPA TQ IRDGDWKSET RP NM+DRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKD RPNSKTVLKGRLSP DL PFSS+ + TF ALQ  GVLN HGRITDLLCEP + L       VTD K L+ FLRERRPATIQVRVRGLHMLEGH LVDG PVSAPLLDFAVFVATCH PL AM+AQPTLYLPKME R ET WW+KVFAA A QLGIP KAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNF+KRLTLPKSL ANL P+  PNN EL+ + APHRR+LLPDNAHTGMGVSFLEAYSNHTSQVNL RGFDSVGGMVTNIPTGD +ID KA AK+RVDKTNEAWKGDAGGWSGHPAFSPYVREPFD+VRALHRGLA+LA+ VGE K+RG IK   D A  ++A+A L+ S++V +G +E+ TLAA   ALE SLSLHVA+N  QYQ+GL RFI M+PPSP V DHELI VPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPL+L S  S+ LT  LL+QAM+EVY  AL++ERG+W  VCKSVPP+QPD+LA+KHFRVA+ +LMILMTN+RCIEFIPDLAYPFLLDPVRED+ LWA+VEEGL  YADPMT+YVV
Sbjct:    1 MESTFKLHPLPQVVLEALQAASSKEGCPEGMEIVGGLTEEQQSLLTLEILTHVRDLVRTERTFSPNLEGLMALRRARQEEIYKNILEKRPAMSFPAETQTIRDGDWKSETHRPPNMADRACENTHPSRAANMAIHGLNSKAASDFMDNEDSQAPLKANVLAGYRTIYEAVCGTIKDVRPNSKTVLKGRLSPQDLEPFSSNADATFQALQEAGVLNGHGRITDLLCEPDFVLEENVTSTVTDLKGLDGFLRERRPATIQVRVRGLHMLEGHFLVDGKPVSAPLLDFAVFVATCHAPLAAMAAQPTLYLPKMESRHETAWWAKVFAAMAAQLGIPPKAIRSTTMIETITASMEKEEMNYTLREHSLGQNKGRYDYLFNFIKRLTLPKSLQANLSPT--PNNLELVGTHAPHRRYLLPDNAHTGMGVSFLEAYSNHTSQVNLRRGFDSVGGMVTNIPTGDPAIDKKAQAKLRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDIVRALHRGLAVLAKQVGEAKVRGTIKGPADPASIRQALADLVASISVENGGRESETLAAFLKALETSLSLHVAANAAQYQDGLLRFIRMEPPSPDVKDHELIEVPADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKARVNVWQWLTLDQPLMLSSSSSATLTPALLAQAMEEVYHAALHDERGLWGAVCKSVPPMQPDSLAEKHFRVARKVLMILMTNDRCIEFIPDLAYPFLLDPVREDDKLWAQVEEGLDAYADPMTRYVV 778

The following BLAST results are available for this feature:

BLAST of NO02G01090.1 vs.

BLAST of NO02G01090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30541.1	0.000e+0	81.28	malate synthase a [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G01090	NO02G01090	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G01090.1	NO02G01090.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G01090.1.cds1	NO02G01090.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G01090.1.cds2	NO02G01090.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:345186..350117-
coding sequence from alignment at chr2:345186..350117-

mRNA sequence

>NO02G01090.1 ID=NO02G01090.1|Name=NO02G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=4490bp
AGGGGATGTGCTTTGCTTTTATTGTTCTCTGGATCGATTTAACCCAGTCG
GTATTAAACAGGAGGAAAGAGGTACTTGTTTATGTCTAGTACACGGCTGC
CTTCGATAATTTGCTTGGCGACGTTGCGTTTCTCCTCTATCTACTTACAT
TCTTTGTCATGCAGTCTTTTTATTTTCCTTATCTGGAGTCAAAGTCGTTT
TTTGGGGGGGCTTTGGACTTCGAGCTGGCAGCAGCACTCGCAGTCCTCTT
AGGAGCTGTTGTTGTCTTCGTCGCCCTTACCCCTGACGCCTTTTTTTTTG
CCTTGCCTCCGTCTTCCCCCACCGCTGCCGCAGCTATATTCCTCTCCTTC
GATTTTTTTGGCTCTCCCATCGGTGGAGCCGCCTCCGGGAACCTCCTCGC
AAACTCACTTATCACCCTCTCCTCCTCCCTCACCATCTCCTCATACTCCT
TCTCTGTCTCGTGATCATACCCAAGCAAATGCAAAAGTCCATGAATCACC
AAAAAGGGCAGCCGACCCTGGACGTCATATACCCTCGCCATAGCCCCCGA
GGCCCCCCTTTCCTCGGACCACTGATTCTCCCCCTCCGCGGCCCAATCCG
CCTCATCCCGGGCACATTGCCGTTGCACGTATCCAGTCGACACCATCATA
TCCCCCAAATCTTTTATCTGTCCATTCAATGCCACTGATTCTGGTGTGGG
TACGCCAGGAGACTTATATTCGTGGAAGGGGAAAGATAGAATATCCGTCG
CAGAGCGTTTCCCCCTGTAACGGTCATTGTACTCGCGGATACTGCGGTCG
TTGGTCAACCAAAGAGAAACATCATGGTCATCTTTGCCGATGATTTCCAT
GATCCCACGTATATGATTGTGCAAGACATCTATGTCCAAGGAGATGCTTC
TTTGGGAATTCCGGATTTGAATCGTGCCGAGGTTGTCGTCGCTCTCTGCC
TCGTCTTGACTGGAGGAAGAGGAGGACATGGAGGAGGGAAGGCCATGCTT
GCGGTCCATGGCATCGATCTTTACGGCGTTGCTGTCATCGTTGTCATCGT
CGTCATCGCTATCGTCATTTCCCGAAAGGTCCTCCTCAGCGTTATCTTCC
TTGTCACCATCCTCATCTTCGTCCTCGTCTTCGTCGTCGTCATCCTCCTC
CTTATCATCTTCACCTTCCAATGCCCCCGTCCTTTCCATCTGACTCATCA
TACGCTGCCACACCGCATCCATAGCCTCACCGCTTTGCATCACTTTTAGC
AACTCTGCCTCGGTCATCTCATCCTCGTCGTCCTCCTCGTCCTCAATCAC
CTTCTTGACCGATGCCTTTGATTTTAACGAGGCTGCCTTTTTCTTCTTCC
CAGCACCTGATGAGGCGGTCGAGGATGCAAAGAGTGCCGTGTTGGTGGGC
GGCATAAACGGAGAACGGTGGCGGTGAAAAGAGCTTAATCTGGCTGTCGT
CACCGTCACCGATGAAGAAGCAAAAGACGAGGATGAGGATGAAGAGGAGT
AGGAGAGGGAGGAGAGGGGTGAGGTCCACGTCGAAAAAGATCCCATGGCA
CGGCGCATATGTGTGGGAACGATGATACCACGCTGAAAACCGAACGCTTC
TCTTGTCACGGTGCACAGGAGAATTAGCACCATCGGGCTTGAGGAGAAGG
GGAAGCGCTGTGGCATGGACAGCTACTAGTCGTATCCGACTAGTCGTATC
CGAAGGGGAATGCAGCGGCCTCTAGACGTCTTTGATAAACAGGCTGGCTG
GGGTGTGACTACTCAAGGCTATTATTCCTTTGCGACTGTATGGCTGTGCG
ATGTAGACATGATGAGGATGTGTGAGTTCAACGCAAGGACAGAGAGTGCC
AGAACGACCTCCTCTCTCACACGAATGGCTGGACAGCTGCTTCAAAGTTC
AAGCAGCCTTTCCATACATTTGTTTGCCCCACGTGCTTTCGCACACCGCC
CCAATAGTCTCAAACCCTCTTCTTGGGCTGTCGACAATGTCCTGCTTGCT
CATTTGGAACTCCGCACTTATTCTCGTTACTTATCCCAACCACACATAGC
ACCACCAAGGTAGGCAGCAGCCACTACTCTCGCTCTTCTCTTAACCCAAG
ATGGAGTCGACATTCAAGCTTCATCCCTTGCCCAAGGTGGCCCTGGAGGC
CCTGCAAGCCGCGGCATCGGCCGACGGCTGTCCGGAGGGTCTGGCCATTG
TCGGAGGTCTGACGGAGGAGCAACGCACGCTCCTCACTCCCCAAATTCTG
ACGCATGTCCGCGACCTCGTCCGCACCGAACGGACATTCTCCCCCAATCT
CGAAGGCCTCATGGCCCTCCGCCGCGCGCGTCAAGAGGAGATCTACACTA
ACATCCTCAACAAGAAGCCGGCCATCTCCTTCCCCGCTGCCACTCAAGCA
ATTCGCGACGGGGACTGGAAGAGCGAGACCGATCGCCCCGCCAACATGTC
TGACCGGGCGTGCGAGAACACCCATCCAAGCCGCGCGGCAAATATGGCCA
TCCACGGATTGAACAGTAAGGCGGCGTCTGATTTCATGGATAACGAGGAC
TCCCAAGCCCCTCTCAAGGCCAATGTGCTGGCAGGATACCGAACGATCTA
CGAGGCGGTTTGTGGGACCATCAAGGACGATCGACCCAACTCCAAAACTG
TGTTAAAGGGTCGCTTGTCTCCGAATGACCTCTCCCCTTTCTCTTCCGAT
GTCAACGTGACTTTTTCCGCCCTCCAGGCCAAGGGGGTCTTGAACGAGCA
TGGACGCATCACTGACCTGCTCTGCGAGCCTTCCTGGACGTTGAGTGCTG
AGGGGGTGACGGATGCGAAGAGTCTCGAGGCTTTCTTGCGGGAGCGGCGT
CCGGCGACGATCCAAGTGAGAGTGAGGGGGCTGCATATGTTGGAGGGGCA
TGTGCTGGTGGACGGTACCCCGGTCTCGGCGCCTTTGCTTGACTTTGCGG
TGTTTGTCGCGACCTGTCATGGACCGTTGAAAGCAATGAGCGCGCAACCG
ACATTGTACTTGCCCAAGATGGAGGGTCGCTTCGAGACGGAGTGGTGGAG
CAAGGTCTTCGCGGCCTATGCCAAGCAGCTGGGTATCCCCGCCAAGGCCA
TCAGGTCCACTACAATGATTGAGACTATCACCGCTAGCATGGAGAAGGAG
GAGATGAACTACACCCTCCGCGAGCACTCCCTAGGGCAGAATAAGGGTCG
ATACGACTACTTATTCAACTTTGTCAAGCGCTTGACTCTCCCCAAATCCC
TCCATGCCAATCTCCCTCCCTCCTCTTCCCCCAACAACGCCGAGCTCCTT
CCCTCCGCCCCCCACCGTCGCTTCCTTCTTCCTGACAATGCGCATACTGG
CATGGGAGTTTCATTCCTCGAGGCCTACTCGAATCACACCTCTCAAGTCA
ATCTGAACCGAGGCTTTGACTCGGTGGGAGGGATGGTGACCAACATTCCT
ACCGGGGACGCGTCTATTGACGGCAAGGCCCACGCCAAGATCAGGGTGGA
CAAGACGAATGAGGCCTGGAAGGGCGACGCAGGGGGATGGAGCGGACACC
CGGCATTCAGCCCTTATGTCCGAGAGCCTTTCGATGTGGTGCGGGCGTTG
CACAGGGGCCTGGCCTTGTTGGCGCAGCTGGTGGGGGAGGACAAGCTCCG
GGGGGCGATCAAGGAGGGGAAAGACGCGGCAGGAAGCCAGAAGGCGGTGG
CTGCGTTGCTGGACTCGGTGAATGTTGCGAGTGGAAGCAAGGAGGCCGCG
ACGTTGGCGGCGTTGTCGGGGGCGCTGGAGAAGTCGTTGTCTCTGCATGT
GGCGTCGAATGTGAGGCAGTACCAAGAGGGCCTGGCTCGATTCATTAATA
TGGATCCGCCCTCCCCCCCCGTGAATGACCACGAGCTTATCGCTGTGCCC
GCCGACCAGCACACCCCCGATAAGTTTACCTATGCCGGCCTTAAGCAATA
CCTCCGCCTCGCCCTCTTCTATACCGCCAGCTTCATCCACGGCACGGGTT
GCATTGCCCTCGACGGGGTCTTCGAGGATCTGGCCACCGCGGAGAAGGCC
CGCGTCAACGTTTGGCAATGGCTCACCCTCGACCAACCCCTCCTTCTCCC
CTCTGGCAAGTCCTCCCCCCTCACCTTTACCCTCCTCTCCCAAGCCATGG
ATGAGGTCTACTCGACTGCCCTGAACGAGGAACGTGGCATGTGGAGCAAA
GTCTGCAAGTCCGTCCCGCCCCTCCAACCCGACACCTTGGCCGACAAACA
CTTCCGGGTAGCCAAGACAATTCTCATGATTCTGATGACGAACAACCGGT
GCATTGAGTTTATTCCGGATCTTGCCTATCCCTTCCTCCTTGACCCTGTC
AGGGAGGATGAGGCGTTGTGGGCCAAGGTAGAGGAAGGGTTGAAAGAGTA
TGCGGACCCGATGACCAAATATGTTGTTAAGGAACTAAAAGCCTGACTAT
AGTAGAACGGAGGAGTGGGGGGGGGGGGAGGGAGGGAGGG

protein sequence of NO02G01090.1

>NO02G01090.1-protein ID=NO02G01090.1-protein|Name=NO02G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bp
MESTFKLHPLPKVALEALQAAASADGCPEGLAIVGGLTEEQRTLLTPQIL
THVRDLVRTERTFSPNLEGLMALRRARQEEIYTNILNKKPAISFPAATQA
IRDGDWKSETDRPANMSDRACENTHPSRAANMAIHGLNSKAASDFMDNED
SQAPLKANVLAGYRTIYEAVCGTIKDDRPNSKTVLKGRLSPNDLSPFSSD
VNVTFSALQAKGVLNEHGRITDLLCEPSWTLSAEGVTDAKSLEAFLRERR
PATIQVRVRGLHMLEGHVLVDGTPVSAPLLDFAVFVATCHGPLKAMSAQP
TLYLPKMEGRFETEWWSKVFAAYAKQLGIPAKAIRSTTMIETITASMEKE
EMNYTLREHSLGQNKGRYDYLFNFVKRLTLPKSLHANLPPSSSPNNAELL
PSAPHRRFLLPDNAHTGMGVSFLEAYSNHTSQVNLNRGFDSVGGMVTNIP
TGDASIDGKAHAKIRVDKTNEAWKGDAGGWSGHPAFSPYVREPFDVVRAL
HRGLALLAQLVGEDKLRGAIKEGKDAAGSQKAVAALLDSVNVASGSKEAA
TLAALSGALEKSLSLHVASNVRQYQEGLARFINMDPPSPPVNDHELIAVP
ADQHTPDKFTYAGLKQYLRLALFYTASFIHGTGCIALDGVFEDLATAEKA
RVNVWQWLTLDQPLLLPSGKSSPLTFTLLSQAMDEVYSTALNEERGMWSK
VCKSVPPLQPDTLADKHFRVAKTILMILMTNNRCIEFIPDLAYPFLLDPV
REDEALWAKVEEGLKEYADPMTKYVVKELKA*

mRNA from alignment at chr2:345186..350117-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G01090.1 ID=NO02G01090.1|Name=NO02G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=4932bp|location=Sequence derived from alignment at chr2:345186..350117- (Nannochloropsis oceanica)
AGGGGATGTGCTTTGCTTTTATTGTTCTCTGGATCGATTTAACCCAGTCG
GTATTAAACAGGAGGAAAGAGGTACTTGTTTATGTCTAGTACACGGCTGC
CTTCGATAATTTGCTTGGCGACGTTGCGTTTCTCCTCTATCTACTTACAT
TCTTTGTCATGCAGTCTTTTTATTTTCCTTATCTGGAGTCAAAGTCGTTT
TTTGGGGGGGCTTTGGACTTCGAGCTGGCAGCAGCACTCGCAGTCCTCTT
AGGAGCTGTTGTTGTCTTCGTCGCCCTTACCCCTGACGCCTTTTTTTTTG
CCTTGCCTCCGTCTTCCCCCACCGCTGCCGCAGCTATATTCCTCTCCTTC
GATTTTTTTGGCTCTCCCATCGGTGGAGCCGCCTCCGGGAACCTCCTCGC
AAACTCACTTATCACCCTCTCCTCCTCCCTCACCATCTCCTCATACTCCT
TCTCTGTCTCGTGATCATACCCAAGCAAATGCAAAAGTCCATGAATCACC
AAAAAGGGCAGCCGACCCTGGACGTCATATACCCTCGCCATAGCCCCCGA
GGCCCCCCTTTCCTCGGACCACTGATTCTCCCCCTCCGCGGCCCAATCCG
CCTCATCCCGGGCACATTGCCGTTGCACGTATCCAGTCGACACCATCATA
TCCCCCAAATCTTTTATCTGTCCATTCAATGCCACTGATTCTGGTGTGGG
TACGCCAGGAGACTTATATTCGTGGAAGGGGAAAGATAGAATATCCGTCG
CAGAGCGTTTCCCCCTGTAACGGTCATTGTACTCGCGGATACTGCGGTCG
TTGGTCAACCAAAGAGAAACATCATGGTCATCTTTGCCGATGATTTCCAT
GATCCCACGTATATGATTGTGCAAGACATCTATGTCCAAGGAGATGCTTC
TTTGGGAATTCCGGATTTGAATCGTGCCGAGGTTGTCGTCGCTCTCTGCC
TCGTCTTGACTGGAGGAAGAGGAGGACATGGAGGAGGGAAGGCCATGCTT
GCGGTCCATGGCATCGATCTTTACGGCGTTGCTGTCATCGTTGTCATCGT
CGTCATCGCTATCGTCATTTCCCGAAAGGTCCTCCTCAGCGTTATCTTCC
TTGTCACCATCCTCATCTTCGTCCTCGTCTTCGTCGTCGTCATCCTCCTC
CTTATCATCTTCACCTTCCAATGCCCCCGTCCTTTCCATCTGACTCATCA
TACGCTGCCACACCGCATCCATAGCCTCACCGCTTTGCATCACTTTTAGC
AACTCTGCCTCGGTCATCTCATCCTCGTCGTCCTCCTCGTCCTCAATCAC
CTTCTTGACCGATGCCTTTGATTTTAACGAGGCTGCCTTTTTCTTCTTCC
CAGCACCTGATGAGGCGGTCGAGGATGCAAAGAGTGCCGTGTTGGTGGGC
GGCATAAACGGAGAACGGTGGCGGTGAAAAGAGCTTAATCTGGCTGTCGT
CACCGTCACCGATGAAGAAGCAAAAGACGAGGATGAGGATGAAGAGGAGT
AGGAGAGGGAGGAGAGGGGTGAGGTCCACGTCGAAAAAGATCCCATGGCA
CGGCGCATATGTGTGGGAACGATGATACCACGCTGAAAACCGAACGCTTC
TCTTGTCACGGTGCACAGGAGAATTAGCACCATCGGGCTTGAGGAGAAGG
GGAAGCGCTGTGGCATGGACAGCTACTAGTCGTATCCGACTAGTCGTATC
CGAAGGGGAATGCAGCGGCCTCTAGACGTCTTTGATAAACAGGCTGGCTG
GGGTGTGACTACTCAAGGCTATTATTCCTTTGCGACTGTATGGCTGTGCG
ATGTAGACATGATGAGGATGTGTGAGTTCAACGCAAGGACAGAGAGTGCC
AGAACGACCTCCTCTCTCACACGAATGGCTGGACAGCTGCTTCAAAGTTC
AAGCAGCCTTTCCATACATTTGTTTGCCCCACGTGCTTTCGCACACCGCC
CCAATAGTCTCAAACCCTCTTCTTGGGCTGTCGACAATGTCCTGCTTGCT
CATTTGGAACTCCGCACTTATTCTCGTTACTTATCCCAACCACACATAGC
ACCACCAAGGTAGGCAGCAGCCACTACTCTCGCTCTTCTCTTAACCCAAG
ATGGAGTCGACATTCAAGCTTCATCCCTTGCCCAAGGTGGCCCTGGAGGC
CCTGCAAGCCGCGGCATCGGCCGACGGCTGTCCGGAGGGTCTGGCCATTG
TCGGAGGTCTGACGGAGGTGAGCGGTTGGTGATGGGGTGGGTGGATTAGG
GAAGGGAGAAGGGAGACAGAACAAAGGCTAAGTTGAAGATGAAATGGGAG
GCGCCAGGCCGCTGCGTTTCCATCCACGGCATGTTTTGTGAGAGCACGAG
TGTGTAGCTCACAAAGCACAGGCATACTGTTGCTCACGGTGGACTGAGCC
TGTGTCGCTTTGTCAATCGCGGTATCCACCATGAACCCCGTCCAACCACC
CCACAAAGGGCAAGGCGCTCGCTTCCTTGGAAGAAGAGCATGTGAGGTGT
GATGTTCGGTCTGTATCTACTCAGTACGCCATTTTTGTCTAACAATTCTC
AATCTGGAGTATTTCAGCAAAATATTTTTCCCCCCCCAATTTCTCCCTAA
ATTCCCTCACGCCCAACCTCTCACGTCATTCCCCCCCGCCCCACGCACCC
ACAAAATAGGAGCAACGCACGCTCCTCACTCCCCAAATTCTGACGCATGT
CCGCGACCTCGTCCGCACCGAACGGACATTCTCCCCCAATCTCGAAGGCC
TCATGGCCCTCCGCCGCGCGCGTCAAGAGGAGATCTACACTAACATCCTC
AACAAGAAGCCGGCCATCTCCTTCCCCGCTGCCACTCAAGCAATTCGCGA
CGGGGACTGGAAGAGCGAGACCGATCGCCCCGCCAACATGTCTGACCGGG
CGTGCGAGAACACCCATCCAAGCCGCGCGGCAAATATGGCCATCCACGGA
TTGAACAGTAAGGCGGCGTCTGATTTCATGGATAACGAGGACTCCCAAGC
CCCTCTCAAGGCCAATGTGCTGGCAGGATACCGAACGATCTACGAGGCGG
TTTGTGGGACCATCAAGGACGATCGACCCAACTCCAAAACTGTGTTAAAG
GGTCGCTTGTCTCCGAATGACCTCTCCCCTTTCTCTTCCGATGTCAACGT
GACTTTTTCCGCCCTCCAGGCCAAGGGGGTCTTGAACGAGCATGGACGCA
TCACTGACCTGCTCTGCGAGCCTTCCTGGACGTTGAGTGCTGAGGGGGTG
ACGGATGCGAAGAGTCTCGAGGCTTTCTTGCGGGAGCGGCGTCCGGCGAC
GATCCAAGTGAGAGTGAGGGGGCTGCATATGTTGGAGGGGCATGTGCTGG
TGGACGGTACCCCGGTCTCGGCGCCTTTGCTTGACTTTGCGGTGTTTGTC
GCGACCTGTCATGGACCGTTGAAAGCAATGAGCGCGCAACCGACATTGTA
CTTGCCCAAGATGGAGGGTCGCTTCGAGACGGAGTGGTGGAGCAAGGTCT
TCGCGGCCTATGCCAAGCAGCTGGGTATCCCCGCCAAGGCCATCAGGTCC
ACTACAATGATTGAGACTATCACCGCTAGCATGGAGAAGGAGGAGATGAA
CTACACCCTCCGCGAGCACTCCCTAGGGCAGAATAAGGGTCGATACGACT
ACTTATTCAACTTTGTCAAGCGCTTGACTCTCCCCAAATCCCTCCATGCC
AATCTCCCTCCCTCCTCTTCCCCCAACAACGCCGAGCTCCTTCCCTCCGC
CCCCCACCGTCGCTTCCTTCTTCCTGACAATGCGCATACTGGCATGGGAG
TTTCATTCCTCGAGGCCTACTCGAATCACACCTCTCAAGTCAATCTGAAC
CGAGGCTTTGACTCGGTGGGAGGGATGGTGACCAACATTCCTACCGGGGA
CGCGTCTATTGACGGCAAGGCCCACGCCAAGATCAGGGTGGACAAGACGA
ATGAGGCCTGGAAGGGCGACGCAGGGGGATGGAGCGGACACCCGGCATTC
AGCCCTTATGTCCGAGAGCCTTTCGATGTGGTGCGGGCGTTGCACAGGGG
CCTGGCCTTGTTGGCGCAGCTGGTGGGGGAGGACAAGCTCCGGGGGGCGA
TCAAGGAGGGGAAAGACGCGGCAGGAAGCCAGAAGGCGGTGGCTGCGTTG
CTGGACTCGGTGAATGTTGCGAGTGGAAGCAAGGAGGCCGCGACGTTGGC
GGCGTTGTCGGGGGCGCTGGAGAAGTCGTTGTCTCTGCATGTGGCGTCGA
ATGTGAGGCAGTACCAAGAGGGCCTGGCTCGATTCATTAATATGGATCCG
CCCTCCCCCCCCGTGAATGACCACGAGCTTATCGCTGTGCCCGCCGACCA
GCACACCCCCGATAAGTTTACCTATGCCGGCCTTAAGCAATACCTCCGCC
TCGCCCTCTTCTATACCGCCAGCTTCATCCACGGCACGGGTTGCATTGCC
CTCGACGGGGTCTTCGAGGATCTGGCCACCGCGGAGAAGGCCCGCGTCAA
CGTTTGGCAATGGCTCACCCTCGACCAACCCCTCCTTCTCCCCTCTGGCA
AGTCCTCCCCCCTCACCTTTACCCTCCTCTCCCAAGCCATGGATGAGGTC
TACTCGACTGCCCTGAACGAGGAACGTGGCATGTGGAGCAAAGTCTGCAA
GTCCGTCCCGCCCCTCCAACCCGACACCTTGGCCGACAAACACTTCCGGG
TAGCCAAGACAATTCTCATGATTCTGATGACGAACAACCGGTGCATTGAG
TTTATTCCGGATCTTGCCTATCCCTTCCTCCTTGACCCTGTCAGGGAGGA
TGAGGCGTTGTGGGCCAAGGTAGAGGAAGGGTTGAAAGAGTATGCGGACC
CGATGACCAAATATGTTGTTAAGGAACTAAAAGCCTGACTATAGTAGAAC
GGAGGAGTGGGGGGGGGGGGAGGGAGGGAGGG

Coding sequence (CDS) from alignment at chr2:345186..350117-

>NO02G01090.1 ID=NO02G01090.1|Name=NO02G01090.1|organism=Nannochloropsis oceanica|type=CDS|length=2346bp|location=Sequence derived from alignment at chr2:345186..350117- (Nannochloropsis oceanica)
ATGGAGTCGACATTCAAGCTTCATCCCTTGCCCAAGGTGGCCCTGGAGGC
CCTGCAAGCCGCGGCATCGGCCGACGGCTGTCCGGAGGGTCTGGCCATTG
TCGGAGGTCTGACGGAGGAGCAACGCACGCTCCTCACTCCCCAAATTCTG
ACGCATGTCCGCGACCTCGTCCGCACCGAACGGACATTCTCCCCCAATCT
CGAAGGCCTCATGGCCCTCCGCCGCGCGCGTCAAGAGGAGATCTACACTA
ACATCCTCAACAAGAAGCCGGCCATCTCCTTCCCCGCTGCCACTCAAGCA
ATTCGCGACGGGGACTGGAAGAGCGAGACCGATCGCCCCGCCAACATGTC
TGACCGGGCGTGCGAGAACACCCATCCAAGCCGCGCGGCAAATATGGCCA
TCCACGGATTGAACAGTAAGGCGGCGTCTGATTTCATGGATAACGAGGAC
TCCCAAGCCCCTCTCAAGGCCAATGTGCTGGCAGGATACCGAACGATCTA
CGAGGCGGTTTGTGGGACCATCAAGGACGATCGACCCAACTCCAAAACTG
TGTTAAAGGGTCGCTTGTCTCCGAATGACCTCTCCCCTTTCTCTTCCGAT
GTCAACGTGACTTTTTCCGCCCTCCAGGCCAAGGGGGTCTTGAACGAGCA
TGGACGCATCACTGACCTGCTCTGCGAGCCTTCCTGGACGTTGAGTGCTG
AGGGGGTGACGGATGCGAAGAGTCTCGAGGCTTTCTTGCGGGAGCGGCGT
CCGGCGACGATCCAAGTGAGAGTGAGGGGGCTGCATATGTTGGAGGGGCA
TGTGCTGGTGGACGGTACCCCGGTCTCGGCGCCTTTGCTTGACTTTGCGG
TGTTTGTCGCGACCTGTCATGGACCGTTGAAAGCAATGAGCGCGCAACCG
ACATTGTACTTGCCCAAGATGGAGGGTCGCTTCGAGACGGAGTGGTGGAG
CAAGGTCTTCGCGGCCTATGCCAAGCAGCTGGGTATCCCCGCCAAGGCCA
TCAGGTCCACTACAATGATTGAGACTATCACCGCTAGCATGGAGAAGGAG
GAGATGAACTACACCCTCCGCGAGCACTCCCTAGGGCAGAATAAGGGTCG
ATACGACTACTTATTCAACTTTGTCAAGCGCTTGACTCTCCCCAAATCCC
TCCATGCCAATCTCCCTCCCTCCTCTTCCCCCAACAACGCCGAGCTCCTT
CCCTCCGCCCCCCACCGTCGCTTCCTTCTTCCTGACAATGCGCATACTGG
CATGGGAGTTTCATTCCTCGAGGCCTACTCGAATCACACCTCTCAAGTCA
ATCTGAACCGAGGCTTTGACTCGGTGGGAGGGATGGTGACCAACATTCCT
ACCGGGGACGCGTCTATTGACGGCAAGGCCCACGCCAAGATCAGGGTGGA
CAAGACGAATGAGGCCTGGAAGGGCGACGCAGGGGGATGGAGCGGACACC
CGGCATTCAGCCCTTATGTCCGAGAGCCTTTCGATGTGGTGCGGGCGTTG
CACAGGGGCCTGGCCTTGTTGGCGCAGCTGGTGGGGGAGGACAAGCTCCG
GGGGGCGATCAAGGAGGGGAAAGACGCGGCAGGAAGCCAGAAGGCGGTGG
CTGCGTTGCTGGACTCGGTGAATGTTGCGAGTGGAAGCAAGGAGGCCGCG
ACGTTGGCGGCGTTGTCGGGGGCGCTGGAGAAGTCGTTGTCTCTGCATGT
GGCGTCGAATGTGAGGCAGTACCAAGAGGGCCTGGCTCGATTCATTAATA
TGGATCCGCCCTCCCCCCCCGTGAATGACCACGAGCTTATCGCTGTGCCC
GCCGACCAGCACACCCCCGATAAGTTTACCTATGCCGGCCTTAAGCAATA
CCTCCGCCTCGCCCTCTTCTATACCGCCAGCTTCATCCACGGCACGGGTT
GCATTGCCCTCGACGGGGTCTTCGAGGATCTGGCCACCGCGGAGAAGGCC
CGCGTCAACGTTTGGCAATGGCTCACCCTCGACCAACCCCTCCTTCTCCC
CTCTGGCAAGTCCTCCCCCCTCACCTTTACCCTCCTCTCCCAAGCCATGG
ATGAGGTCTACTCGACTGCCCTGAACGAGGAACGTGGCATGTGGAGCAAA
GTCTGCAAGTCCGTCCCGCCCCTCCAACCCGACACCTTGGCCGACAAACA
CTTCCGGGTAGCCAAGACAATTCTCATGATTCTGATGACGAACAACCGGT
GCATTGAGTTTATTCCGGATCTTGCCTATCCCTTCCTCCTTGACCCTGTC
AGGGAGGATGAGGCGTTGTGGGCCAAGGTAGAGGAAGGGTTGAAAGAGTA
TGCGGACCCGATGACCAAATATGTTGTTAAGGAACTAAAAGCCTGA

Synonyms

Publications