NO02G00860, NO02G00860 (gene) Nannochloropsis oceanica

Overview
NameNO02G00860
Unique NameNO02G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2675
Alignment locationchr2:276687..279361 +

Link to JBrowse

Properties
Property NameValue
DescriptionDynein regulatory complex protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:276687..279361 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029440DRC1_C
Vocabulary: Biological Process
TermDefinition
GO:0070286axonemal dynein complex assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005858axonemal dynein complex
Homology
BLAST of NO02G00860 vs. NCBI_GenBank
Match: CBN80015.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 162.5 bits (410), Expect = 5.700e-36
Identity = 85/196 (43.37%), Postives = 136/196 (69.39%), Query Frame = 0
Query:  226 QQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPPRNDLLLELD 422
            +++  +L + +  Q+ +E++Q E+EAL  +DGE++ +L+I+LE +    ++Q+EE+  T Q+  EKL +++R+LT+R++E SA+L+ QK KL KL+D++  L   Y+E D R+KKR EELT+E  R+ K+Y D+Q +FRHF  +D +RY+  W+ H +E+  A+ KVL  DE++  Q LG EW  PP  DLL ELD
Sbjct:  212 KRREMELSYMESKQKRQEQYQAEIEALLTRDGEEHTKLKIKLETDIQTLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENSATLSHQKRKLTKLKDALSGLVQRYQETDTRDKKRNEELTEEFRRITKQYNDMQAKFRHFEISDNNRYEQVWSMHREEVLEAINKVLQADEIIHQQQLGWEW-KPPNMDLLAELD 406          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_004992885.1 (hypothetical protein PTSG_05992 [Salpingoeca rosetta] >EGD74628.1 hypothetical protein PTSG_05992 [Salpingoeca rosetta])

HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30
Identity = 111/420 (26.43%), Postives = 215/420 (51.19%), Query Frame = 0
Query:   30 YRAAFLARMQTSLEDVQALGQETDALKAQICQRNGRRADA----RMVLLQGAD----------------RRSQNEEIDRRWEHLLLTSSVPPDQIQTSS---DGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPPRNDLLLELDEDKKQ 427
            +R     R +  L +VQ   +   AL     Q N R ADA     +V  QG +                RR++      R E L        D  Q  S   D ++AK         I +LEL + LE+QR  C+A+++ K+++I E QA L   +++YV+ +     +++ ++  M    K L   Y RE++ +E TF+ ER+ +    +   +  +  ++  +L+  +++++  E  +R+LE LR+ D E+Y Q++ RLE +     ++++ +  T Q+  EKL +++++L  R+ E + ++++QK +L KL+D V  L ++ K+ + + +     LT+E  R+  +++DLQ++ +HF   ++ R D  W  +E++  A  +++L  D ++  Q LG +W PP  + +   + E++ Q
Sbjct:   56 HRMEAAKRREQGLAEVQRQEEVNQALNPDPIQSNARIADAYKNIDLVQEQGMEKVTLVRVTADYAEATRRRAEERARAERREKLKQLRDDTVDMFQRVSSKWDQAAAK---------IDVLELNKSLESQREQCSAIVKKKDNMIGELQAALKAKDDDYVRNLRAQAADVDTIIAYMDDQIKTLSKDYRRELEMIEETFMRERQQLLDETRREWEEAMKLRREKELKAIEESRQRIEEQERQLEHLRISDSEEYSQIKRRLEHDIMNMQQELQNMRATYQLNTEKLEYNYQVLKKRDEENTVTISSQKRRLNKLQDVVNNLRTKLKKQEVQIQAENIALTEEYTRVTSQFQDLQRKAKHFERLNQKRIDDVWTLNEEQCVALAQELLQADRVIHEQQLGLQWVPPLEDVMDSTVSEEELQ 466          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_005831899.1 (hypothetical protein GUITHDRAFT_56998, partial [Guillardia theta CCMP2712] >EKX44919.1 hypothetical protein GUITHDRAFT_56998, partial [Guillardia theta CCMP2712])

HSP 1 Score: 137.1 bits (344), Expect = 2.600e-28
Identity = 105/360 (29.17%), Postives = 195/360 (54.17%), Query Frame = 0
Query:   61 QRNGRRADARMVLLQGADRRSQNEE---IDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIENDSKDSIPL-LELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPPRNDL 417
            QR+    D R+       +R  NEE   +DRR  H LL       + ++S+  ++A  ++  S   I + ++L+ ++EAQ+ AC  ++++K++LI++ Q +L   +E+YV+A+ +   +++N+   M  ++   Q  YE+E+ +LE+ F  ER+ + +  +   D L  +     LR   + ++  +  Q +L  +   D ED+H L++RLE E    ++Q+E++  T Q+  EKL ++ R+L +R  E   ++ A K KL +L+D++  L ++Y   D + K    EL++   R  + + DL+++  HF  +D  RY   W  HE  I+A + K L  D+++  Q LG  W PP   +L
Sbjct:   15 QRDEEVTDIRVQADDREAQRRTNEEALRVDRR--HKLLF------EAESSARRNAAIAMKWSSLFEIDVPMDLHHDMEAQQTACWRIIEAKDNLIRDFQVELKNKDEQYVKALRQGVQDLDNLQDSMARNASRQQMLYEQELLSLESNFEAERKELIEQCRKEWDKLFDKSLQQQLRQKGEREKRVDLNQEKLVIVHRHDTEDFHTLKVRLETEVQNLEQQLEDMRATYQLNTEKLEYNFRVLHERNEENQNTINANKRKLARLQDNLSNLMAKYTTLDNKYKAENNELSESYQRYTQFFMDLKEKLFHFQKSDSKRYFDVWNMHEQMIKAKLLKSLQADKIIHEQQLGLLWFPPNEEEL 366          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: ELU08983.1 (hypothetical protein CAPTEDRAFT_182544 [Capitella teleta])

HSP 1 Score: 131.7 bits (330), Expect = 1.100e-26
Identity = 89/336 (26.49%), Postives = 180/336 (53.57%), Query Frame = 0
Query:   77 ADRRSQNEEIDR-RWEHLLLTSSVPPDQIQTSSDGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            A RR  +EE+ R R E L   +    ++ +        K  E   +  IP  EL+  L AQ+  C  M+  KN LI + Q +L + ++ YV+ + +   +++ M+ +M    K L   Y  E+  +E  FV ER  +   ++   D  +  ++  ++ + +  ++  E ++ +L+ LRVQD E+Y+Q++I+LE +     +Q++++  T Q+ QEKL ++ ++L  R+ E + + + QK K+ +L+D +  L  +  + +   +   ++L+ E  R+ +++++LQ++ +HF   D  ++   W  +EDE ++ V KVL  + ++  Q LG ++  P
Sbjct:   93 ASRRLDDEEVRRLRKEKLEAEAKAGAEKFE-----EITKKWETALQKEIP-QELHEMLMAQKALCDGMIDEKNKLINDFQMELKQKDDLYVKDLKKQAEDVDLMIERMDEQVKQLTKAYREELGQVERAFVAERTDLLDTNRKKWDSTMKNRRDKEVEYMKSREKRVEDYENQLQHLRVQDAEEYNQVKIKLETDVQILQQQLQQMKATYQLNQEKLEYNFQVLRKRDEENTITKSQQKRKITRLQDVLTNLKIKLAKQEKTYRDENQQLSDEYKRITEQFRELQKKSKHFMATDHRKFHDIWVMNEDEAKSYVHKVLDENRVVHEQQLGLQYQMP 422          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_024581819.1 (drc1_chlre ame: full=dynein regulatory complex protein 1 [Plasmopara halstedii] >CEG45450.1 drc1_chlre ame: full=dynein regulatory complex protein 1 [Plasmopara halstedii])

HSP 1 Score: 131.3 bits (329), Expect = 1.400e-26
Identity = 85/287 (29.62%), Postives = 151/287 (52.61%), Query Frame = 0
Query:  128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPPRN 415
            EL+ ELE Q  AC  +L SK+ +I E Q QL   ++EYV A+     +++ +V +M    + +Q+ YE E+  +E  F  ER  +   ++  +D L  +++  +L + +  Q  +E++ +E+E LR++D E+Y++L+                                          SA+L  QK KL +L++++  L ++Y + DAR+++   ELT+E  RL K+Y++LQ++F HF  +  +++D  W  HE+E    +EK+L  D ++  Q LG  W PP R+
Sbjct:  137 ELHDELELQDRACREILASKDAIICEFQNQLKAKDDEYVVALKVQAEDVQKLVDRMGHQYREMQEQYELELAQMEEAFSKERNDLIANNKHEIDSLFERRREMELVYMEVKQTRDEQYLQEIEDLRLRDAEEYNELKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSATLGQQKRKLARLKETLATLITKYNQTDARDRRLNAELTEEYQRLTKQYRELQRKFAHFEISGNNKFDEIWQMHEEEAIHKIEKLLDADRIIHEQQLGLTWRPPARS 423          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_014668334.1 (PREDICTED: dynein regulatory complex protein 1-like [Priapulus caudatus])

HSP 1 Score: 130.2 bits (326), Expect = 3.100e-26
Identity = 81/304 (26.64%), Postives = 168/304 (55.26%), Query Frame = 0
Query:  128 ELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPPRNDLLLELDEDKKQYAGGD 432
            ELYREL  Q+  C A++  KN LI E Q ++   ++ YV+ + +   +I+ ++ ++    K+L   Y+ E++ +E  F +ER  + Q  +  ++ ++  ++  +L + +   +  E    +L+ LR  D E+++Q++I+LE +    ++Q++++  T Q+ QEKL ++ ++L  R+ E + + + QK K+ +L+D +  L S+  + + + +     LT +  R+ ++ +DLQ++ RHF   D  R+   W  +E +++  V+K+L  D ++  Q L  +W PP      + LD +    +G D
Sbjct:   77 ELYRELLKQKSLCGAVIDEKNRLISELQKEMYRKDDHYVKQLKKQAEDIDLLMERIDEHIKSLNRSYKNELNDIEKAFESERRELLQNSKKKLEHMMQTRQDTELEYMKKRDKYVEEHDFQLDHLRGNDSEEFNQVKIKLETDVQILEQQLQQMKATYQLNQEKLEYNFQVLKKRDEENTITKSQQKRKITRLQDVLNNLKSKAVKQEKQYRDENNSLTDDYKRISEQLEDLQKKGRHFQVTDAKRFYDIWCMNEAQVKMFVKKILEEDRIIHEQQLDVQWQPP-----AISLDNEGPIISGKD 375          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_013011470.1 (dynein regulatory complex protein 1 [Cavia porcellus])

HSP 1 Score: 125.6 bits (314), Expect = 7.700e-25
Identity = 91/342 (26.61%), Postives = 183/342 (53.51%), Query Frame = 0
Query:   79 RRSQNEEIDR----RWEHLLLTSSVPPDQIQTS-SDGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEE----LTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPP 412
            RR + EEI R    + E+ + TS    D+I +   +G   +I +          EL+  L AQ+  C  +++ KN LI E Q +L   +++YV+ + +   +I  ++ +M    K+    + +E+  +E  F  ER+ +  +++   +  +      +L +  +  +  E ++++L   R+ D E+Y+ ++I+LE +    ++Q++++  T Q+ QEKL ++ ++L  R+ E +   + QK K+ +L+D +  L S+Y    A++KK+F+E    LT +  RL   +K+LQ+  RHF+  D +++   W  +E+E +  ++K  ++D ++  Q LG  WT P
Sbjct:  108 RRVEEEEIKRLRVEKLENEVKTSQDKFDEITSKWKEGRQRQIPQ----------ELWDMLSAQQLHCAGLIEDKNKLISELQQELKVKDDQYVKDLKKQSDDISLLLERMEEQVKSTMKAFRQELVHIEKAFELERQELLISNKKKWEWALQAHSTKELEYLINRMKRVEDYEQQLNKQRIFDCEEYNTIKIKLEQDVQILEQQLQQMKATYQLNQEKLEYNFQVLKKRDEESTVIKSQQKRKINRLQDILNNLRSKY----AKQKKQFQEENQSLTTDYKRLVMHFKELQKSMRHFALVDAEKFREIWLMNEEEAKGLIDKAFSVDRIIHTQHLGLPWTAP 435          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_017324685.1 (PREDICTED: dynein regulatory complex protein 1 [Ictalurus punctatus])

HSP 1 Score: 124.0 bits (310), Expect = 2.300e-24
Identity = 84/330 (25.45%), Postives = 172/330 (52.12%), Query Frame = 0
Query:   88 RRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            +R E L   + +  ++++  S  S+ K  +      + K  +   EL  +L  Q+  C  +++ KN LI E Q +L   ++ +V+   R   E++ ++ +M+    +L+    +EMD +E++   ER  +  AH+   +    ++   +L +     +  E ++  L+ LR +  E+ ++++I+LE +    ++ ++    T Q+ QEKL ++ ++L   E E + S   Q  K+ +L+D+   L       + + ++  + LT +  RL ++YKD+Q+R RHF+  D  RY+  W  +EDE +A V +++ +D ++   +LG  W+PPP
Sbjct:   98 KRREELREANRLRLEKLENESKSSTEKFSKLMNKWTEVKTKVIHQELRDDLRKQQQLCWQIIEDKNKLINELQQELKGRDDRFVKDRKREVEEVDLLIERMQEQISSLKKDCRKEMDLIESSLGDERRDLLTAHKNKWEHRRKERSDKELEYLLQRMKMLEEYESLLDRLRAESAEESNKIKIKLETDVQCLEQDLQVRKATYQLNQEKLEYNVQMLKKYEEEYAISKGQQIRKVTRLQDTRNNLKKRRAVQEKQSREEIQSLTNKYKRLVQQYKDVQKRIRHFAAVDAKRYEEVWLMNEDEAKALVYRIMDLDRVIHEHMLGLTWSPPP 427          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: KTF81957.1 (hypothetical protein cypCar_00002304 [Cyprinus carpio])

HSP 1 Score: 121.3 bits (303), Expect = 1.500e-23
Identity = 88/341 (25.81%), Postives = 169/341 (49.56%), Query Frame = 0
Query:   77 ADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            +DRR++ EE  R          +  D+++  +  S  K  E      D+K     L+L   + +Q+  C  +L  KN LI E Q +L   ++ YV+ + R   +I+ ++ +M     +L+  Y  ++  +E +F  ER  +   H+      + +Q   +LR+        E  +  L+ LRV   E+Y+  +IR++ E     ++++EV     + +EKL + + +L  RE E +   +  K K+++++D +  L S+    + + K   + L  +  R+ ++Y D+Q++ RHF+  D +R++  W  +EDE++A   +VL  D ++  Q LG  W  PP
Sbjct:   98 SDRRTELEEACR----------LRRDKLENEAKSSQEKFEEITRKWTDAKMKQTPLDLRDAMNSQQQLCEQILGDKNKLISELQQELKASDDHYVKDLKRQAKDIDLLIERMEEQISSLKKSYREDLQQIENSFDEERRTLLTKHRKKWGHQMKEQSEKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENAILKSHLKRKIIRMQDVLNNLKSKCASQEKQLKTEEQSLRNDYTRIKQQYIDMQKKARHFAALDAERFEKLWLINEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 428          
BLAST of NO02G00860 vs. NCBI_GenBank
Match: XP_016150809.1 (PREDICTED: dynein regulatory complex protein 1-like [Sinocyclocheilus grahami])

HSP 1 Score: 119.8 bits (299), Expect = 4.300e-23
Identity = 87/341 (25.51%), Postives = 168/341 (49.27%), Query Frame = 0
Query:   77 ADRRSQNEEIDRRWEHLLLTSSVPPDQIQTSSDGSSAKIIE-----NDSKDSIPLLELYRELEAQRGACTAMLQSKNDLIQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDALEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELEALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILTDREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVCRLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLFVQLLGQEWTPPP 413
            +DRR++ EE  R          +  + ++  +  S  K  E      D+K     L+L   L +Q+  C  +L  KN LI E Q +L   ++ YV+ + R   +I+ ++ ++     +L+  Y  ++  +E +F  ER  +   H+      + ++   +LR+        E  +  L+ LRV   E+Y+  +IR++ E     ++++EV     + +EKL + + +L  RE E +   +  K K+++++D +  L S+    + + K   + L  +  R+ ++YKD+Q++ RHF+  D +R++  W   EDE++A   +VL  D ++  Q LG  W  PP
Sbjct:   98 SDRRTELEEACR----------LRRENLENEAKSSQEKFGEITRKWTDAKMKQTPLDLRDALNSQQQLCEQILVDKNKLISELQQELKASDDHYVKDLKRQAKDIDLLIDRIEEQISSLKKSYREDLQQIENSFDEERRTLLTKHRKKWGHQMKERSEKELRNMMQGLSLLEEHEDLLQKLRVWKAEEYNTDKIRMDTEVQNLRKKLQEVKFNCHLNEEKLDYKYEVLKKREEENAILKSHLKRKIIRMQDVLNNLKSKCANQEKQSKAEEQSLRNDYTRIKQQYKDMQKKARHFAALDAERFEKLWLISEDEVKALAHRVLETDRIIHEQQLGLAWVSPP 428          
The following BLAST results are available for this feature:
BLAST of NO02G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN80015.15.700e-3643.37conserved unknown protein [Ectocarpus siliculosus][more]
XP_004992885.11.200e-3026.43hypothetical protein PTSG_05992 [Salpingoeca roset... [more]
XP_005831899.12.600e-2829.17hypothetical protein GUITHDRAFT_56998, partial [Gu... [more]
ELU08983.11.100e-2626.49hypothetical protein CAPTEDRAFT_182544 [Capitella ... [more]
XP_024581819.11.400e-2629.62drc1_chlre ame: full=dynein regulatory complex pro... [more]
XP_014668334.13.100e-2626.64PREDICTED: dynein regulatory complex protein 1-lik... [more]
XP_013011470.17.700e-2526.61dynein regulatory complex protein 1 [Cavia porcell... [more]
XP_017324685.12.300e-2425.45PREDICTED: dynein regulatory complex protein 1 [Ic... [more]
KTF81957.11.500e-2325.81hypothetical protein cypCar_00002304 [Cyprinus car... [more]
XP_016150809.14.300e-2325.51PREDICTED: dynein regulatory complex protein 1-lik... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006684NSK006684Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00860.1NO02G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|652715gene_663Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00860.1NO02G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00860 ID=NO02G00860|Name=NO02G00860|organism=Nannochloropsis oceanica|type=gene|length=2675bp
ATGGTCTCGGAAAAGGTACTATTATCCTCGTCCTTACCCATGGTCGACGA
GAGTCCTCTTAAACAAATTCCCCAGCAAGTCGCCCTTTACCGCGCCGCTT
TCTTGGCACGAATGCAGACGAGTCTGGAGGATGTGCAGGCATTGGGCCAG
GAAACTGACGCCTTGAAAGCCCAGATATGTCAACGCAATGGGCGGCGGGC
CGATGCACGGATGGTGCTGCTGCAAGGAGCGGACAGGCGGTCGCAAAATG
AGGAGATTGACAGGCGTTGGGAACACCTGCTCCTTACCTCTTCTGTCCCG
CCCGATCAGATCCAGACTTCCTCTGATGGTAGCAGCGCGAAGATTATTGA
GAATGACAGCAAAGATTCCATCCCGCTCCTTGAATTGTATCGGGAGCTCG
AGGCGCAGCGCGGGGCTTGCACAGCCATGCTTCAGTCCAAGAACGACCTC
ATTCAAGAAGCCCAAGCGCAGCTCACGGAGCATGAAGAGGAATACGTCCA
AGCCATTTCACGATATGGCCTAGAGATCGAAAATATGGTTTTAAAGATGC
GTGCGGACAGCAAGGCCTTGCAGGACCACTACGAGCGAGAGATGGATGCC
TTGGAGGCCACCTTTGTGACGGAGCGGGAGGGTATGCAGCAGGCGCATCA
GATCACTATGGACGGGCTTGTGGCTCAGCAGAAAGCAGCTGATCTCCGGC
ATTCTCAAGATGCCCAAGAGGGGGAAGAACGCTTTCAGCGCGAGCTGGAA
GCGTTGCGAGTGCAGGATGGGGAGGATTACCACCAGCTTCAGATTCGGTT
GGAAATGGAGCGAGACGCTGCGGACCGGCAAGTGGAAGAGGTCATGACCA
CGACGCAAGTGCAGCAAGAAAAGCTTGTGCACGACCACCGCATTCTGACG
GATCGTGAAGTAGAGAAATCGGCGAGCCTGGCGGCGCAGAAAATGAAGTT
GGTAAAGCTGAGGGATTCGGTACTGGCCTTGACCTCCGAGTACAAGGAAC
ACGACGCGCGGGAGAAAAAGCGATTCGAGGAACTGACGCAGGAGGTCTGT
CGCCTGCATAAGAAGTACAAGGACTTGCAGCAACGTTTTCGGCATTTTTC
TTGCGCGGATCGGGATAGGTATGACAGTGCATGGGCGCGGCACGAGGATG
AGATTCAAGCAGCGGTTGAGAAGGTGCTGGCGATTGACGAGCTTCTATTT
GTGCAGCTTCTGGGGCAAGAATGGACGCCTCCGCCGAGGAACGACTTGTT
GCTGGAGTTGGATGAAGATAAGAAACAATATGCCGGTGGTGACGAAGGCC
CCAACCCGGTGGGCGCGCACTCGAAGGGGAAGGAGGAAGAGGGGGATGGA
AGAGCTGCCACGGCCGTTGGGGGCGAGGAGGAGGAGAAGGAGAAGGATGG
CGCTTTCGGCACAGGAAACGGACGTCAGGAAATAGATTCAGCGCTGGTGA
TGGAGCAGGTATTGATGAACAAGATGCTTGGACTCATCATCCAGGAAGCT
GATTTTCTTCTTCTTGAGGACACAGAAGCCGTAGAGGCACAGCAGAAAAA
GGCGGCGGCAGCGGCAGAGAAGAAAGCCAAGAGCGGAACAAGGCCCAAGG
CTGATTGGGTTAATACGGTGGCCAAGGTAGTGGCGGAGTTCCCGCCACTC
CTGCGCAGAGATAAGGATACGAAGAGGAGCAGCAAGAGCGTGGAGATAAA
GGCCCAAACGGAAAAGAAGGACGGCGAAGCAGAGACGGCTACGGTCCTTA
TGCCTGAGGAGGCTGCTGTGGCTGCGCAGGAGGTGCATGCAATTGCCGCA
AACGAGGGCAATGAACTGACACAAGCAGCGGAAGAAGCGATGCTGGTCGT
ACCAGCGGCAGAAGAAGCAGCCACAGCAGCTGCAAAGGCCGCGCAGGCTG
AGGAAGAGGACCTGCTGGGTGCATCACAATATGGCTGTCAGCGCGTACTC
CGTGCCCTGGGCATCCAGGACGAGGCTGAGGCCCGGACGTTGCTCACGTA
TTTCCTTAAAAAGAAGGAACGGAAAGAGGGAGAAAGCAGAGAGGGGGATG
GGGGGGAGCAAAAGGAGGACGGGCTGGAAGAGGTAGGGATGATCCGGAAG
CTTGCACTACTTTTGCCGGCCGCTGCGTTTGCCATTTCTCCGCAAGACAT
GTATGTGATGATCGGACCTGAGGAGGTGATAGGCGCTTTGCACCGTTTCC
TCTTTGACAAAAAGAGGCTGGAAGAGAATGCATGCAAGCAGCAGCTACGG
CAGCGCCAGCGTCGGCATCGTCGGCAGAGCCTGAGCGGGAGCTGCAGTGG
TCAAGGAGGAGGTACCGAGGGAGGAGAAGGAGATAGGACTTTGTGGCGAA
GCCTGGCAAACGTCTTGCCGGCAGCGCATTTCCAGACGTGGCAAGACTTG
GAGCAGTCACTCTTGGCGTACCATCGCTTGCTGGAGGAGCGAGGAAGGGT
GTTGGGTTCGATGGAACGGTTGGAGGAGGAGAATGCCAGGTTGCGACTGA
CTGTGAGGGCGTGTGTCGAAGACAGGGTGAATGGGGAGTTGTTGGTGCCT
CCGTTTATGGATTCAGGAGCAGGAGGGGAAGGAGAGGGAGAAGAAGAGGG
GCCTCGATAGAGGAAAGAGATATTGGAGGGAGAGGCAAGGATGGTATGAG
AAATGAAGCCATATAGGTGAGAAGC
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protein sequence of NO02G00860.1

>NO02G00860.1-protein ID=NO02G00860.1-protein|Name=NO02G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=870bp
MVSEKVLLSSSLPMVDESPLKQIPQQVALYRAAFLARMQTSLEDVQALGQ
ETDALKAQICQRNGRRADARMVLLQGADRRSQNEEIDRRWEHLLLTSSVP
PDQIQTSSDGSSAKIIENDSKDSIPLLELYRELEAQRGACTAMLQSKNDL
IQEAQAQLTEHEEEYVQAISRYGLEIENMVLKMRADSKALQDHYEREMDA
LEATFVTEREGMQQAHQITMDGLVAQQKAADLRHSQDAQEGEERFQRELE
ALRVQDGEDYHQLQIRLEMERDAADRQVEEVMTTTQVQQEKLVHDHRILT
DREVEKSASLAAQKMKLVKLRDSVLALTSEYKEHDAREKKRFEELTQEVC
RLHKKYKDLQQRFRHFSCADRDRYDSAWARHEDEIQAAVEKVLAIDELLF
VQLLGQEWTPPPRNDLLLELDEDKKQYAGGDEGPNPVGAHSKGKEEEGDG
RAATAVGGEEEEKEKDGAFGTGNGRQEIDSALVMEQVLMNKMLGLIIQEA
DFLLLEDTEAVEAQQKKAAAAAEKKAKSGTRPKADWVNTVAKVVAEFPPL
LRRDKDTKRSSKSVEIKAQTEKKDGEAETATVLMPEEAAVAAQEVHAIAA
NEGNELTQAAEEAMLVVPAAEEAATAAAKAAQAEEEDLLGASQYGCQRVL
RALGIQDEAEARTLLTYFLKKKERKEGESREGDGGEQKEDGLEEVGMIRK
LALLLPAAAFAISPQDMYVMIGPEEVIGALHRFLFDKKRLEENACKQQLR
QRQRRHRRQSLSGSCSGQGGGTEGGEGDRTLWRSLANVLPAAHFQTWQDL
EQSLLAYHRLLEERGRVLGSMERLEEENARLRLTVRACVEDRVNGELLVP
PFMDSGAGGEGEGEEEGPR*
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Synonyms
Publications