NO02G00490, NO02G00490 (gene) Nannochloropsis oceanica

Overview
NameNO02G00490
Unique NameNO02G00490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1837
Alignment locationchr2:167110..168946 -

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Properties
Property NameValue
DescriptionrRNA 2'-O-methyltransferase fibrillarin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:167110..168946 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR000692Fibrillarin
Homology
BLAST of NO02G00490 vs. NCBI_GenBank
Match: CBJ27088.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 416.0 bits (1068), Expect = 8.200e-113
Identity = 200/247 (80.97%), Postives = 223/247 (90.28%), Query Frame = 0
Query:    1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248
            MKGGAKVV+E HRHEGVFIAR KEDAL TLNS+PGK VYGEK I VE PP  +G  +K+EYRVWNPFRSKLAAAILGGVD I + PG+KVLYLGAA+GTTVSHV+DIVGP+GCVYAVEF+HRPGRDLINMAK RTNVIPI+EDARHPLKYRMLVGMVDT+FADVAQPDQARIV+LNSHYFLKNGGH V+S+KASC+DSTA+PEAVF +EV KL+ E FKP EQ+TLEPYERDHAVV+A YRP  K+K
Sbjct:    1 MKGGAKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 247          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: EJK46258.1 (hypothetical protein THAOC_35086 [Thalassiosira oceanica])

HSP 1 Score: 415.6 bits (1067), Expect = 1.100e-112
Identity = 203/251 (80.88%), Postives = 225/251 (89.64%), Query Frame = 0
Query:    1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSK----LAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248
            MKGG+KVVIE HRHEGVFIAR KEDALVTLNSTPG  VYGEKRI VE PPGP+G A K+EYRVWNPFRSK    +AAAILGGVD+IW+ PGSKVLYLGAA+GT+VSHVSDIVGP G VYAVEFSHRPGRDL+++AK RTNVIPI+EDARHPLKYRMLVGMVD +FAD+AQPDQARIV+LNSHYFLKNGGH V+S+KASCIDSTAAPEAVF++EV KLQ E FKPLEQLTLEPYERDH V+++ YRP  K K
Sbjct:  334 MKGGSKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVESPPGPDGNAVKVEYRVWNPFRSKHCLLVAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGNVYAVEFSHRPGRDLLSVAKGRTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVISIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLISQYRPTKKKK 584          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_002293557.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89293.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 415.2 bits (1066), Expect = 1.400e-112
Identity = 199/241 (82.57%), Postives = 220/241 (91.29%), Query Frame = 0
Query:    7 VVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248
            VVIE HRHEGVFIAR KEDALVTLNSTPG  VYGEKRI VE PPGP+G  TK+EYRVWNPFRSK+AAAILGGVD+IW+ PGSKVLYLGAA+GT+VSHVSDIVGP G VYAVEFSHRPGRDL+N+AK RTNVIPI+EDARHPLKYRMLVGMVD +FAD+AQPDQARIV+LNSHYFLKNGGH V+++KASCIDSTAAPEAVF++EV KLQ E FKPLEQLTLEPYERDH V++A YRP+ K K
Sbjct:   61 VVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVETPPGPDGNTTKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGAVYAVEFSHRPGRDLLNVAKARTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLIAQYRPSKKKK 301          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_002183533.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44715.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 403.7 bits (1036), Expect = 4.200e-109
Identity = 193/244 (79.10%), Postives = 221/244 (90.57%), Query Frame = 0
Query:    6 KVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGP-EGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249
            KV++E HRHEGVF+A+ KEDALVTLNSTPG  VYGEKRI VE PP   E VATK+EYRVWNPFRSK+AAAILGGV++IW+ PG KVLY+GAA+GT+VSHVSDIVGPTG VYAVEFSHRPGRDL+ +AK RTN+IPI+EDARHPLKYRML+GMVD++FADVAQPDQARIV+LNSHYFLKNGGH V+++KASCIDSTAAPEAVFQ+EV+KL+ E FKP+EQ+TLEPYERDHAVVVA YRP  K  K
Sbjct:   73 KVIVEPHRHEGVFVAKGKEDALVTLNSTPGVAVYGEKRISVEVPPATGETVATKVEYRVWNPFRSKIAAAILGGVENIWIKPGYKVLYIGAAAGTSVSHVSDIVGPTGAVYAVEFSHRPGRDLLGVAKQRTNIIPIIEDARHPLKYRMLIGMVDSVFADVAQPDQARIVALNSHYFLKNGGHAVIAIKASCIDSTAAPEAVFQREVEKLRSENFKPIEQVTLEPYERDHAVVVAEYRPKKKKSK 316          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: GAX24681.1 (rRNA 2'-O-methyltransferase fibrillarin [Fistulifera solaris])

HSP 1 Score: 403.7 bits (1036), Expect = 4.200e-109
Identity = 196/240 (81.67%), Postives = 218/240 (90.83%), Query Frame = 0
Query:    7 VVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPP-GPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPK 246
            V++E HRHEGVF+AR KEDALVTLNSTPG  VYGEKRI VE PP   E VA K+EYRVWNPFRSKLAAA+LGGVD+IW+ PGSKVLY+GAA+GT+VSHVSDIVGP G VYAVEFSHRPGRDL++MAK RTNVIPI+EDARHPLKYRML+GMVDT+FADVAQPDQARIV+LNSHYFLKNGGH V++VKASCIDSTA+PEAVF +EV+KLQ E FKPLEQLTLEPYERDHAVV+A YRP  K
Sbjct:   74 VIVEPHRHEGVFVARGKEDALVTLNSTPGIAVYGEKRISVEVPPKDGETVAQKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGSKVLYIGAAAGTSVSHVSDIVGPQGAVYAVEFSHRPGRDLLSMAKQRTNVIPIIEDARHPLKYRMLIGMVDTVFADVAQPDQARIVALNSHYFLKNGGHAVIAVKASCIDSTASPEAVFAREVQKLQAENFKPLEQLTLEPYERDHAVVIAEYRPNKK 313          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_008611239.1 (hypothetical protein SDRG_07197 [Saprolegnia diclina VS20] >EQC35489.1 hypothetical protein SDRG_07197 [Saprolegnia diclina VS20])

HSP 1 Score: 402.9 bits (1034), Expect = 7.200e-109
Identity = 200/247 (80.97%), Postives = 216/247 (87.45%), Query Frame = 0
Query:    1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248
            M GG KV++E HRH GVFIAR KEDALVTLNSTPGK VYGEKRI V+ P        K+EYRVWNPFRSKLAAAILGGVD+IWMGPG+KVLY+G ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNVIPI+EDARHPLKYRMLV MVDTIFADVAQPDQARIV+LN+ YFLKNGGH VVS+KASCIDSTA  EAVF +EVKKLQ+++FKP EQLTLEPYERDHAVVV +YR A K K
Sbjct:    1 MAGGNKVIVEPHRHGGVFIARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKLAAAILGGVDNIWMGPGAKVLYIGGASGTTVSHVSDIVGPTGAVYAVEFSHRSGRDLINMAKSRTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNASYFLKNGGHFVVSIKASCIDSTAPAEAVFTREVKKLQQDQFKPAEQLTLEPYERDHAVVVGSYRVAKKEK 247          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_009521478.1 (hypothetical protein PHYSODRAFT_481376 [Phytophthora sojae] >EGZ26190.1 hypothetical protein PHYSODRAFT_481376 [Phytophthora sojae])

HSP 1 Score: 401.4 bits (1030), Expect = 2.100e-108
Identity = 197/248 (79.44%), Postives = 216/248 (87.10%), Query Frame = 0
Query:    1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249
            M GGAKVV+E HRH G+FIAR KEDALVTLNSTPGK VYGEKRI V+ P        K+EYRVWNPFRSK+AAAILGGVD+IW+ PG+KVLYLG ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNV+PI+EDARHPLKYRMLV MVD +FADVAQPDQARIV+LN+ +FLKNGGH V+S+KASCIDSTAAPEAVF +EVKKLQ+E+FKP EQLTLEPYERDHAVVV  YR   K KK
Sbjct:    1 MAGGAKVVVEPHRHAGIFIARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKIAAAILGGVDNIWIQPGAKVLYLGGASGTTVSHVSDIVGPTGAVYAVEFSHRVGRDLINMAKSRTNVVPIIEDARHPLKYRMLVPMVDVVFADVAQPDQARIVALNASHFLKNGGHFVISIKASCIDSTAAPEAVFAREVKKLQQEQFKPAEQLTLEPYERDHAVVVGAYRVPKKEKK 248          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: AQV04395.1 (fibrillarin [Phytophthora capsici])

HSP 1 Score: 399.8 bits (1026), Expect = 6.100e-108
Identity = 196/248 (79.03%), Postives = 216/248 (87.10%), Query Frame = 0
Query:    1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249
            M GGAKVV+E HRH G+FIAR KEDALVTLNSTPGK VYGEKRI V+ P        K+EYRVWNPFRSK+AAAILGGVD+IW+ PG+KVLYLG ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNV+PI+EDARHPLKYRMLV MVD +FADVAQPDQARIV+LN+ +FLKNGGH V+S+KASCIDSTA PEAVF +EVKKLQ+E+FKP EQLTLEPYERDHAVVV +YR   K KK
Sbjct:    1 MAGGAKVVVEPHRHAGIFIARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKIAAAILGGVDNIWIQPGAKVLYLGGASGTTVSHVSDIVGPTGAVYAVEFSHRVGRDLINMAKSRTNVVPIIEDARHPLKYRMLVPMVDVVFADVAQPDQARIVALNASHFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQQEQFKPAEQLTLEPYERDHAVVVGSYRVPKKEKK 248          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_008872077.1 (rRNA 2'-O-methyltransferase fibrillarin [Aphanomyces invadans] >ETV99521.1 rRNA 2'-O-methyltransferase fibrillarin [Aphanomyces invadans])

HSP 1 Score: 399.4 bits (1025), Expect = 8.000e-108
Identity = 199/245 (81.22%), Postives = 216/245 (88.16%), Query Frame = 0
Query:    4 GAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249
            G KV++E HRHEGVF+AR KEDALVTLNSTPGK VYGEKRI V+ P        K+EYRVWNPFRSKLAAAILGGVD+IWMGPG+KVLY+G ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNVIPI+EDARHPLKYRMLV MVDTIFADVAQPDQARIV+LN+ YFLKNGGH VVS+KASCIDSTA  EAVF +EVKKLQ+++FKP EQLTLEPYERDHAVVV +YR APK  K
Sbjct:   74 GNKVLVEPHRHEGVFVARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKLAAAILGGVDNIWMGPGAKVLYIGGASGTTVSHVSDIVGPTGAVYAVEFSHRSGRDLINMAKSRTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNASYFLKNGGHFVVSIKASCIDSTAPAEAVFAREVKKLQQDQFKPAEQLTLEPYERDHAVVVGSYR-APKKDK 317          
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_008872078.1 (rRNA 2'-O-methyltransferase fibrillarin, variant [Aphanomyces invadans] >ETV99522.1 rRNA 2'-O-methyltransferase fibrillarin, variant [Aphanomyces invadans])

HSP 1 Score: 399.4 bits (1025), Expect = 8.000e-108
Identity = 199/245 (81.22%), Postives = 216/245 (88.16%), Query Frame = 0
Query:    4 GAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249
            G KV++E HRHEGVF+AR KEDALVTLNSTPGK VYGEKRI V+ P        K+EYRVWNPFRSKLAAAILGGVD+IWMGPG+KVLY+G ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNVIPI+EDARHPLKYRMLV MVDTIFADVAQPDQARIV+LN+ YFLKNGGH VVS+KASCIDSTA  EAVF +EVKKLQ+++FKP EQLTLEPYERDHAVVV +YR APK  K
Sbjct:   66 GNKVLVEPHRHEGVFVARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKLAAAILGGVDNIWMGPGAKVLYIGGASGTTVSHVSDIVGPTGAVYAVEFSHRSGRDLINMAKSRTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNASYFLKNGGHFVVSIKASCIDSTAPAEAVFAREVKKLQQDQFKPAEQLTLEPYERDHAVVVGSYR-APKKDK 309          
The following BLAST results are available for this feature:
BLAST of NO02G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ27088.18.200e-11380.97conserved unknown protein [Ectocarpus siliculosus][more]
EJK46258.11.100e-11280.88hypothetical protein THAOC_35086 [Thalassiosira oc... [more]
XP_002293557.11.400e-11282.57predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002183533.14.200e-10979.10predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX24681.14.200e-10981.67rRNA 2'-O-methyltransferase fibrillarin [Fistulife... [more]
XP_008611239.17.200e-10980.97hypothetical protein SDRG_07197 [Saprolegnia dicli... [more]
XP_009521478.12.100e-10879.44hypothetical protein PHYSODRAFT_481376 [Phytophtho... [more]
AQV04395.16.100e-10879.03fibrillarin [Phytophthora capsici][more]
XP_008872077.18.000e-10881.22rRNA 2'-O-methyltransferase fibrillarin [Aphanomyc... [more]
XP_008872078.18.000e-10881.22rRNA 2'-O-methyltransferase fibrillarin, variant [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006633NSK006633Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00490.1NO02G00490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573542gene_619Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101013g2gene55Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00490.1NO02G00490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00490 ID=NO02G00490|Name=NO02G00490|organism=Nannochloropsis oceanica|type=gene|length=1837bp
GGCGGCGTCGAGTGCGCGAAAAAAGTATCTAGGGCATGGCTGAGGGGATT
GGTCTCAAGGCACGGCCATCAACACGGGCAGCCAGGAACGCTAGCTGGCT
TATTTGTTGGTTGGTTTGTGTCTTGCGCATGCATGGATAGTAAGGATTCT
CTGTTGTCCATCCAGATGCTCGACCCCACCTTCTTGTATTGTCCCCTCTC
CTCTCTCAAATCTCACTCACGACCCCCACCCACCCACCGCTCTTGATCCT
CTCCACACAGCACTGGCAACATAAGAACTTACAGAGAGGAACAACAACCA
CAGCAGTAACCATGATGAGCAGAGGAGGCGGCCGAGGCCGCGGTGGCCCG
GGTGGCTTCCGCGGAGGTGGCGGTGGACGAGgtatgcaacatatctctct
ccttctcccctttcccttccactttcacttgtccttcaaatgcggttcgt
aagccaacgcgattgaatgttcagatgtttgacggaacattgttgctgct
cagatgcgaagaatgcgtgtatcggtccgcgtcaggtggtcgcacctctg
tacctctgcctcctttcctatgtcacacgaattctcatgcctttccattt
tacttcctcctctctccagGTGGTGGCGGACGTGGGGGTGGTTTTGGTGG
GGGTCGTGGTGGGGGTGGACGTGGCTTTGGTGGCGGGCGTGGCGCTCCCC
GAGGGGGCGGCCGTGGAGCCCCTCGAGGACGAGGAGGAGGCCGAGGGGGA
GGTCGAGGAGGTGGACGCGGGGGGGGGGAATGAAGGGAGGGGCAAAGGTA
GTGATTGAGGCCCACCGGCACGAAGGAGTATTTATCGCCCGAAGTAAAGA
GGATGCCTTAGTGACGCTCAACAGCACGCCAGGAAAGGACGTGTATGGGG
AGAAGAGAATCCAGGTGGAAGGGCCACCAGGACCGGAGGGAGTGGCGACC
AAGCTCGAATACCGTGTTTGGAATCCCTTCCGGTCGAAGCTGGCTGCGGC
GATCTTGGGAGGTGTCGACCACATATGGATGGGGCCGGGGAGCAAGGTGT
TGTATCTGGGGGCAGCGAGCGGGACGACAGTAAGCCACGTGTCAGATATT
GTGGGGCCGACGGGCTGTGTGTACGCGGTGGAGTTCTCGCACCGCCCGGG
GCGGGATTTGATCAACATGGCCAAGCTGCGGACGAATGTGATTCCAATCG
TGGAGGATGCACGACACCCGTTGAAGTACCGCATGCTAGgtaggctgaga
ggattggagaagcacagagagggaaggtggaaaggatttggatttttgag
cccttgtctcctttatgtaggtaaattttcacatcccttcccctccctcc
ctccctgtctcccgccctcccgcagTCGGCATGGTTGACACGATCTTCGC
CGACGTGGCCCAGCCGGATCAGGCCCGAATCGTCTCGCTGAACTCCCACT
ACTTCCTCAAAAATGGCGGTCATGTCGTGGTGTCGGTCAAGGCGTCCTGT
ATTGATTCCACTGCTGCCCCTGAAGCAGTATTCCAAAAAGAGgtaatata
tatgcatatggccttgccattcccccccctattcctccctctctcccttt
tttacgactttttatttttcgactggggcttggtgcaatttctgctctta
agaaatttagagacaccttcagattcactcaccctcctccgctccctccc
tctctcacccccattagGTGAAGAAGCTACAAGAAGAGAAATTCAAGCCA
CTGGAGCAGCTGACGCTCGAGCCTTACGAGCGAGATCACGCGGTGGTCGT
TGCCACCTACAGGCCCGCGCCCAAGGCCAAGAAATAG
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protein sequence of NO02G00490.1

>NO02G00490.1-protein ID=NO02G00490.1-protein|Name=NO02G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=249bp
MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPP
GPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTT
VSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKY
RMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTA
APEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK*
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Synonyms
Publications