NO02G00490, NO02G00490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00490 vs. NCBI_GenBank
Match: CBJ27088.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 416.0 bits (1068), Expect = 8.200e-113 Identity = 200/247 (80.97%), Postives = 223/247 (90.28%), Query Frame = 0 Query: 1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248 MKGGAKVV+E HRHEGVFIAR KEDAL TLNS+PGK VYGEK I VE PP +G +K+EYRVWNPFRSKLAAAILGGVD I + PG+KVLYLGAA+GTTVSHV+DIVGP+GCVYAVEF+HRPGRDLINMAK RTNVIPI+EDARHPLKYRMLVGMVDT+FADVAQPDQARIV+LNSHYFLKNGGH V+S+KASC+DSTA+PEAVF +EV KL+ E FKP EQ+TLEPYERDHAVV+A YRP K+K Sbjct: 1 MKGGAKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 247
BLAST of NO02G00490 vs. NCBI_GenBank
Match: EJK46258.1 (hypothetical protein THAOC_35086 [Thalassiosira oceanica]) HSP 1 Score: 415.6 bits (1067), Expect = 1.100e-112 Identity = 203/251 (80.88%), Postives = 225/251 (89.64%), Query Frame = 0 Query: 1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSK----LAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248 MKGG+KVVIE HRHEGVFIAR KEDALVTLNSTPG VYGEKRI VE PPGP+G A K+EYRVWNPFRSK +AAAILGGVD+IW+ PGSKVLYLGAA+GT+VSHVSDIVGP G VYAVEFSHRPGRDL+++AK RTNVIPI+EDARHPLKYRMLVGMVD +FAD+AQPDQARIV+LNSHYFLKNGGH V+S+KASCIDSTAAPEAVF++EV KLQ E FKPLEQLTLEPYERDH V+++ YRP K K Sbjct: 334 MKGGSKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVESPPGPDGNAVKVEYRVWNPFRSKHCLLVAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGNVYAVEFSHRPGRDLLSVAKGRTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVISIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLISQYRPTKKKK 584
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_002293557.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89293.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 415.2 bits (1066), Expect = 1.400e-112 Identity = 199/241 (82.57%), Postives = 220/241 (91.29%), Query Frame = 0 Query: 7 VVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248 VVIE HRHEGVFIAR KEDALVTLNSTPG VYGEKRI VE PPGP+G TK+EYRVWNPFRSK+AAAILGGVD+IW+ PGSKVLYLGAA+GT+VSHVSDIVGP G VYAVEFSHRPGRDL+N+AK RTNVIPI+EDARHPLKYRMLVGMVD +FAD+AQPDQARIV+LNSHYFLKNGGH V+++KASCIDSTAAPEAVF++EV KLQ E FKPLEQLTLEPYERDH V++A YRP+ K K Sbjct: 61 VVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVETPPGPDGNTTKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGAVYAVEFSHRPGRDLLNVAKARTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLIAQYRPSKKKK 301
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_002183533.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44715.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 403.7 bits (1036), Expect = 4.200e-109 Identity = 193/244 (79.10%), Postives = 221/244 (90.57%), Query Frame = 0 Query: 6 KVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGP-EGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249 KV++E HRHEGVF+A+ KEDALVTLNSTPG VYGEKRI VE PP E VATK+EYRVWNPFRSK+AAAILGGV++IW+ PG KVLY+GAA+GT+VSHVSDIVGPTG VYAVEFSHRPGRDL+ +AK RTN+IPI+EDARHPLKYRML+GMVD++FADVAQPDQARIV+LNSHYFLKNGGH V+++KASCIDSTAAPEAVFQ+EV+KL+ E FKP+EQ+TLEPYERDHAVVVA YRP K K Sbjct: 73 KVIVEPHRHEGVFVAKGKEDALVTLNSTPGVAVYGEKRISVEVPPATGETVATKVEYRVWNPFRSKIAAAILGGVENIWIKPGYKVLYIGAAAGTSVSHVSDIVGPTGAVYAVEFSHRPGRDLLGVAKQRTNIIPIIEDARHPLKYRMLIGMVDSVFADVAQPDQARIVALNSHYFLKNGGHAVIAIKASCIDSTAAPEAVFQREVEKLRSENFKPIEQVTLEPYERDHAVVVAEYRPKKKKSK 316
BLAST of NO02G00490 vs. NCBI_GenBank
Match: GAX24681.1 (rRNA 2'-O-methyltransferase fibrillarin [Fistulifera solaris]) HSP 1 Score: 403.7 bits (1036), Expect = 4.200e-109 Identity = 196/240 (81.67%), Postives = 218/240 (90.83%), Query Frame = 0 Query: 7 VVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPP-GPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPK 246 V++E HRHEGVF+AR KEDALVTLNSTPG VYGEKRI VE PP E VA K+EYRVWNPFRSKLAAA+LGGVD+IW+ PGSKVLY+GAA+GT+VSHVSDIVGP G VYAVEFSHRPGRDL++MAK RTNVIPI+EDARHPLKYRML+GMVDT+FADVAQPDQARIV+LNSHYFLKNGGH V++VKASCIDSTA+PEAVF +EV+KLQ E FKPLEQLTLEPYERDHAVV+A YRP K Sbjct: 74 VIVEPHRHEGVFVARGKEDALVTLNSTPGIAVYGEKRISVEVPPKDGETVAQKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGSKVLYIGAAAGTSVSHVSDIVGPQGAVYAVEFSHRPGRDLLSMAKQRTNVIPIIEDARHPLKYRMLIGMVDTVFADVAQPDQARIVALNSHYFLKNGGHAVIAVKASCIDSTASPEAVFAREVQKLQAENFKPLEQLTLEPYERDHAVVIAEYRPNKK 313
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_008611239.1 (hypothetical protein SDRG_07197 [Saprolegnia diclina VS20] >EQC35489.1 hypothetical protein SDRG_07197 [Saprolegnia diclina VS20]) HSP 1 Score: 402.9 bits (1034), Expect = 7.200e-109 Identity = 200/247 (80.97%), Postives = 216/247 (87.45%), Query Frame = 0 Query: 1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAK 248 M GG KV++E HRH GVFIAR KEDALVTLNSTPGK VYGEKRI V+ P K+EYRVWNPFRSKLAAAILGGVD+IWMGPG+KVLY+G ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNVIPI+EDARHPLKYRMLV MVDTIFADVAQPDQARIV+LN+ YFLKNGGH VVS+KASCIDSTA EAVF +EVKKLQ+++FKP EQLTLEPYERDHAVVV +YR A K K Sbjct: 1 MAGGNKVIVEPHRHGGVFIARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKLAAAILGGVDNIWMGPGAKVLYIGGASGTTVSHVSDIVGPTGAVYAVEFSHRSGRDLINMAKSRTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNASYFLKNGGHFVVSIKASCIDSTAPAEAVFTREVKKLQQDQFKPAEQLTLEPYERDHAVVVGSYRVAKKEK 247
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_009521478.1 (hypothetical protein PHYSODRAFT_481376 [Phytophthora sojae] >EGZ26190.1 hypothetical protein PHYSODRAFT_481376 [Phytophthora sojae]) HSP 1 Score: 401.4 bits (1030), Expect = 2.100e-108 Identity = 197/248 (79.44%), Postives = 216/248 (87.10%), Query Frame = 0 Query: 1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249 M GGAKVV+E HRH G+FIAR KEDALVTLNSTPGK VYGEKRI V+ P K+EYRVWNPFRSK+AAAILGGVD+IW+ PG+KVLYLG ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNV+PI+EDARHPLKYRMLV MVD +FADVAQPDQARIV+LN+ +FLKNGGH V+S+KASCIDSTAAPEAVF +EVKKLQ+E+FKP EQLTLEPYERDHAVVV YR K KK Sbjct: 1 MAGGAKVVVEPHRHAGIFIARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKIAAAILGGVDNIWIQPGAKVLYLGGASGTTVSHVSDIVGPTGAVYAVEFSHRVGRDLINMAKSRTNVVPIIEDARHPLKYRMLVPMVDVVFADVAQPDQARIVALNASHFLKNGGHFVISIKASCIDSTAAPEAVFAREVKKLQQEQFKPAEQLTLEPYERDHAVVVGAYRVPKKEKK 248
BLAST of NO02G00490 vs. NCBI_GenBank
Match: AQV04395.1 (fibrillarin [Phytophthora capsici]) HSP 1 Score: 399.8 bits (1026), Expect = 6.100e-108 Identity = 196/248 (79.03%), Postives = 216/248 (87.10%), Query Frame = 0 Query: 1 MKGGAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249 M GGAKVV+E HRH G+FIAR KEDALVTLNSTPGK VYGEKRI V+ P K+EYRVWNPFRSK+AAAILGGVD+IW+ PG+KVLYLG ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNV+PI+EDARHPLKYRMLV MVD +FADVAQPDQARIV+LN+ +FLKNGGH V+S+KASCIDSTA PEAVF +EVKKLQ+E+FKP EQLTLEPYERDHAVVV +YR K KK Sbjct: 1 MAGGAKVVVEPHRHAGIFIARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKIAAAILGGVDNIWIQPGAKVLYLGGASGTTVSHVSDIVGPTGAVYAVEFSHRVGRDLINMAKSRTNVVPIIEDARHPLKYRMLVPMVDVVFADVAQPDQARIVALNASHFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQQEQFKPAEQLTLEPYERDHAVVVGSYRVPKKEKK 248
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_008872077.1 (rRNA 2'-O-methyltransferase fibrillarin [Aphanomyces invadans] >ETV99521.1 rRNA 2'-O-methyltransferase fibrillarin [Aphanomyces invadans]) HSP 1 Score: 399.4 bits (1025), Expect = 8.000e-108 Identity = 199/245 (81.22%), Postives = 216/245 (88.16%), Query Frame = 0 Query: 4 GAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249 G KV++E HRHEGVF+AR KEDALVTLNSTPGK VYGEKRI V+ P K+EYRVWNPFRSKLAAAILGGVD+IWMGPG+KVLY+G ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNVIPI+EDARHPLKYRMLV MVDTIFADVAQPDQARIV+LN+ YFLKNGGH VVS+KASCIDSTA EAVF +EVKKLQ+++FKP EQLTLEPYERDHAVVV +YR APK K Sbjct: 74 GNKVLVEPHRHEGVFVARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKLAAAILGGVDNIWMGPGAKVLYIGGASGTTVSHVSDIVGPTGAVYAVEFSHRSGRDLINMAKSRTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNASYFLKNGGHFVVSIKASCIDSTAPAEAVFAREVKKLQQDQFKPAEQLTLEPYERDHAVVVGSYR-APKKDK 317
BLAST of NO02G00490 vs. NCBI_GenBank
Match: XP_008872078.1 (rRNA 2'-O-methyltransferase fibrillarin, variant [Aphanomyces invadans] >ETV99522.1 rRNA 2'-O-methyltransferase fibrillarin, variant [Aphanomyces invadans]) HSP 1 Score: 399.4 bits (1025), Expect = 8.000e-108 Identity = 199/245 (81.22%), Postives = 216/245 (88.16%), Query Frame = 0 Query: 4 GAKVVIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMGPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVVSVKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKAKK 249 G KV++E HRHEGVF+AR KEDALVTLNSTPGK VYGEKRI V+ P K+EYRVWNPFRSKLAAAILGGVD+IWMGPG+KVLY+G ASGTTVSHVSDIVGPTG VYAVEFSHR GRDLINMAK RTNVIPI+EDARHPLKYRMLV MVDTIFADVAQPDQARIV+LN+ YFLKNGGH VVS+KASCIDSTA EAVF +EVKKLQ+++FKP EQLTLEPYERDHAVVV +YR APK K Sbjct: 66 GNKVLVEPHRHEGVFVARGKEDALVTLNSTPGKSVYGEKRISVDVPAASGEGTEKVEYRVWNPFRSKLAAAILGGVDNIWMGPGAKVLYIGGASGTTVSHVSDIVGPTGAVYAVEFSHRSGRDLINMAKSRTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNASYFLKNGGHFVVSIKASCIDSTAPAEAVFAREVKKLQQDQFKPAEQLTLEPYERDHAVVVGSYR-APKKDK 309 The following BLAST results are available for this feature:
BLAST of NO02G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00490 ID=NO02G00490|Name=NO02G00490|organism=Nannochloropsis oceanica|type=gene|length=1837bpback to top protein sequence of NO02G00490.1 >NO02G00490.1-protein ID=NO02G00490.1-protein|Name=NO02G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=249bpback to top Synonyms
Publications
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