NO02G00340, NO02G00340 (gene) Nannochloropsis oceanica

Overview
NameNO02G00340
Unique NameNO02G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3476
Alignment locationchr2:118198..121673 -

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Properties
Property NameValue
DescriptionWd-40 repeat protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:118198..121673 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR024862TRPV
IPR005821Ion_trans_dom
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005215transporter activity
Homology
BLAST of NO02G00340 vs. NCBI_GenBank
Match: EWM30632.1 (wd-40 repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 571.2 bits (1471), Expect = 4.000e-159
Identity = 309/453 (68.21%), Postives = 351/453 (77.48%), Query Frame = 0
Query:  196 LEAPSLILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLFNAVGRERKEGGG---VMEGGVGTRLARLEDNVEGLQGKLDQILAMLHSAVQDDDTSDEEDE 646
            +EA  LIL++KW+AFGRPIYTGLL+LSLLLA+NYSL++A LLPLL S   WR+T G +WQ  LL NA PL+  EYWQ+H QG R Y  S+FRL DLLTL  T+AS+ LRFFL + E   +++RTLYH+LSA+ASWLLWAKL+VYLRGF ETGPLIRMI QIVKDTRFFLVVLAVSV+GFSNCLY+LFQEDI+REDA G  SPIR+SYGSLFHT LVLFAALNS                                     NLDY PFNAS+F+VL SLIYLFYCVC+TIILLNLLIALMGDSYDK+QENA AQGRYEQAVSVLEIE MLPQRILQDP FFPRWVQVLRPKPG DGG++ DAG D+W GRLRQIYKKIE SEKRLSQDIEG F+  G E KEG     V + G+  R+  LEDNVEGLQ KLDQ+LA+L SAVQ+ DT+D+E E
Sbjct:    1 MEAVFLILQFKWSAFGRPIYTGLLSLSLLLAINYSLSTAYLLPLLRSRVSWRQTCGWIWQSFLLLNAAPLLACEYWQFHTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDE---QDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNS-------------------------------------NLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAG-DQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQAKLDQVLALLQSAVQEVDTTDDEAE 412          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004988269.1 (hypothetical protein PTSG_10886 [Salpingoeca rosetta] >EGD80207.1 hypothetical protein PTSG_10886 [Salpingoeca rosetta])

HSP 1 Score: 99.0 bits (245), Expect = 5.800e-17
Identity = 122/477 (25.58%), Postives = 201/477 (42.14%), Query Frame = 0
Query:  122 GGEGGDGRY---RRLASSKYLLHADISHVYHEITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPSLILKYKWTAFGR-------PIYTGLLALSLLLALNYSLASALLLPLL----HSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHA-QGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALP---SSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLS 581
            G E G G +   +RL   K L   + +     +TE   V +  A    P      + SFLR   D     GK  +F       ++++KW  FG+         Y   L L  +L   ++ +   L+ LL    +S+A     + +V   LL   AF  + QE  Q  A   +  Y ++W  L  +  + +   +    +   +                A+A +L W +LL YL+ F+ TGPL+RMI  I  D R+FL+VL +S++       LL ++D                                  SALP      P++  LL    + L  F              D   F+   + VL+ ++++   V   ++LLNLLIALM DSY+++Q+ A  + +  +A  + E E  + ++  ++P+ FP+W+ VL PK GA  G V      +W G L  + K++   + R+S
Sbjct:  974 GHERGYGEFFLWKRLREGKVLHKLEDAGATPTLTEACIVPIPYAAAFLPG---KEETSFLRALAD----KGKAELFGSRIVRAVVQFKWETFGQRRFLWEAAWYMLSLVLITVLTFVFNASGKDLVQLLGAADNSSANASDISSVVIVALLAGMAFHDLVQEVRQVVAINNYLFYVWNWMDLASISLIFVVVGTYFAGWVHARA-------------FLALAVYLRWYRLLYYLQPFQSTGPLVRMILVICYDMRYFLLVLGISIVAAWTSFRLLLRDD----------------------------------SALPVEELGDPANGLLLMFNMLLLADF--------------DLATFDGD-YVVLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILHEQEKFMTKKEKRNPKLFPKWLHVLVPKGGAGSGGV------QWQGVLHALKKEVAGVDNRVS 1375          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004996926.1 (WD-40 repeat protein [Salpingoeca rosetta] >EGD81722.1 WD-40 repeat protein [Salpingoeca rosetta])

HSP 1 Score: 98.2 bits (243), Expect = 9.900e-17
Identity = 92/391 (23.53%), Postives = 174/391 (44.50%), Query Frame = 0
Query:  187 RTGKTWIFELEAPSLILKYKWTAFGRPIY-----TGLLALSLLLALNY---SLASALLLPLLHSNAPWRRTAGLVWQGLLLA-NAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQI 569
            RTG++  F    P ++++Y+W  FG+ I+       ++AL+L + + +    L    +           + A +V    LLA   +  V +    W  +    Y  S +  LD+L +++++  ++  F          +         AI S++ W  +L +L+ F  TGPL+RM+ +I+   R+FL+VL ++++  +N   LL +E           +P  + Y  +   +L +F  L                               +LS     +L+ L F+A  + + + L+++   +   I+LLNLLIALM DSY+ +Q+ A+ + +  +A  + E E    +   Q   ++PR++ VL P+    GG    A + +W G L  +
Sbjct:  914 RTGRSDTFAGIVPQMLVEYRWRCFGQRIHLRNLLVYMVALALFVTMGFLGQYLEGTSVTDFNEGRRDEAKPAAIVVGACLLAVTTYHAVREIRQAWMERAGLYYLKSVWNWLDMLRIIMSYVGVIALFV---------DAHKTSRFFFAIGSYVFWFGILFFLQAFSSTGPLVRMVIEIMVGMRWFLLVLGIALLATANVFVLLVEE-----------TPAPNGYEDVADVLLTMFRLL-------------------------------MLS-----DLELLNFSAGSYTIPLKLVWVLTMILVPIVLLNLLIALMSDSYELIQDKAVVEFQRLRAQIIREQEIFFDRSAFQRKDWYPRFLHVLLPRGRNTGG----ADSSQWQGVLHAL 1244          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004998276.1 (serine/Threonine protein kinase [Salpingoeca rosetta] >EGD76101.1 serine/Threonine protein kinase [Salpingoeca rosetta])

HSP 1 Score: 97.4 bits (241), Expect = 1.700e-16
Identity = 133/534 (24.91%), Postives = 220/534 (41.20%), Query Frame = 0
Query:  121 GGGEGGDGRYRRLASSKYLLHADISHVYH-------------EITETSG---VEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPSLILKYKWTAFGRPIYTG-----LLALSLLLALNY--SLASALLLPLLHSNAPWRRTAGLVWQGLLLANAFPLVCQEYWQW-HAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLFNAVGRERKEGGGVMEGGVGTRLARLEDNVEGLQGKLDQILAML 631
            G   G D R  RL +S+ ++  D   V +             E  ET     V  EA +V  P A  +  D    L  D     G+  +F       ++++KW  +GR  +       LL++  +  L +   L    +  LL S A       ++   +L   A      E  +W + +G    F++W   LD L ++L F  ++L  +L    G  ++ R +     AIAS+L W  +L +L+ FK TGPL+RMI  I  D R+FLVVL +S++       LL  +D         T P+    G   + +L++F  L               LL    +  F                         + VL+ ++++   V   ++LLNLLIALM DSY+++Q+ A  + +  +A  + E E  L      DP+ FP+W+ VL PK     G+       +W G L  +  +++   +  + D++   +                +  RLA +E  V G+Q  L + +  L
Sbjct: 1041 GADVGYDHRATRLPTSRMIVVGDECPVENAGLWQSLRASGELEALETQSNHTVLTEARVVPVPYAASTLPDGTCLL--DTLVEAGRAELFGNYIARAVVRFKWETYGRRKFRNEANWYLLSVVFITVLTFVVDLQGNDVSQLLSSKASATDVVSVIMVLVLGLYAASEAKHEMLEWRYLRGHWRDFWNW---LDSLNIVLAF--VVLATYL----GGWQHARAVL----AIASYLRWFGILYHLQAFKTTGPLVRMILAICFDMRYFLVVLGISIVAAWTSFRLLLLDD--------KTVPL-DGLGDPANGLLIMFNML---------------LLAEFELDTF----------------------GGTYAVLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARYLRERELFLSPAEKSDPKLFPKWLHVLVPK---STGVGESTPGQQWQGMLTMLKMEMKTQSRASAADVKARVDE---------------LAVRLAAMEAQVHGVQESLAEKVGAL 1495          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004993290.1 (hypothetical protein PTSG_06401 [Salpingoeca rosetta] >EGD74390.1 hypothetical protein PTSG_06401 [Salpingoeca rosetta])

HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15
Identity = 123/458 (26.86%), Postives = 193/458 (42.14%), Query Frame = 0
Query:  188 TGKTWIFELEAPSLILKYKWTAFGRP--IYTGL-----LALSLLLALNYSLASALLLPLLHSN---APWRRT----AGLVWQGLLLANAFPLVCQEYWQWHA-QGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLFNAVGRERKEGGGVMEGGVGTRLARLEDNVEGLQGKLDQILAML 631
            TG   +F+      I+++KW AFGR   ++  L     +AL   L   ++ +   LL LL  +    P R      A +V   LL   A   +     + HA  G+    ++W   L +L  LL F  +   FF   G               AIA +L W  LL +L+ F+ TGPLIR I  I  D R+FL+VL +S++   +   LL ++D         T P+    G   + +L++F  L               LL    +  F                         + VL+ ++++   V   ++LL+LLIALM DSY+++Q+ A  + +  +A  + E E        +DP+  P+W+ VL PK  A G      G  RW G L  + K++      L+Q ++GL   + +        M        ARL D    ++ KLDQ+L  L
Sbjct: 1194 TGDAGLFDNPTARAIVEFKWEAFGRRKFLWAALWHVLSVALMTTLTFVFNTSGEKLLELLGPDDEVDPSRNAGTDIASVVITLLLAVLAIVELRHVVKRLHAVWGYWRDLWNW---LHILNTLLVFVVLFTSFF---GWAHA-------RAFLAIAVYLRWYGLLYFLQPFQSTGPLIRTILAICYDIRYFLLVLGISIVAAWSSFRLLLRDD--------NTLPL-EELGDPANGLLLMFNML---------------LLADFDLDTFD----------------------GEYVVLLRILFVISTVLVPVVLLSLLIALMSDSYERIQDRADIEFQLLRARILREQEAFFSVPEKRDPKLHPKWLHVLVPKDTAGG----SEGTGRWQGVLHALKKEVSSKTDNLNQRMDGLEKHIAKS-------MADTKRETHARLAD----MERKLDQLLFSL 1577          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004992021.1 (WD-40 repeat protein [Salpingoeca rosetta] >EGD75564.1 WD-40 repeat protein [Salpingoeca rosetta])

HSP 1 Score: 93.2 bits (230), Expect = 3.200e-15
Identity = 117/434 (26.96%), Postives = 191/434 (44.01%), Query Frame = 0
Query:  157 VEVEAALVAFPAA---LRSGQDSFLRLCCDLYERTGKTWIFELEAPSLILKYKWTAFGRPIYT--GLL-ALSLLLALNYSLASALLLPLLH---SNAPWRRTAGLVWQGLLLANAFPLVCQEYWQWHAQGFRAY-FFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVM-GFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRL 580
            V  EA +V  P A   L  G+ SFL    D    TG+  +F       I+++KW  +GR  +   GL   LSLLL   ++    L    +H   ++      A +V    +L  +   + +E  QW     R + F++W   LD   ++L F   ++    + G    ++ R L     A++ +L W   L Y++ FK TGPL+RM+  I  D RFFL++L +S+M  +     LL Q     ++A+G  +          + +LV+F  L               LL    +                            + VLV +I+L   +   ++LLNLLIALM DSY+++Q+ A  + +  +A  + E E  + +   +DPR FP+W+ VL PK    GG+      ++W G L  +   I+    +L
Sbjct: 1195 VVTEARVVPVPYAGGFLPDGR-SFL----DALVETGRAELFNNYIARAIVRFKWECYGRRTFQRGGLFYLLSLLLVTTFAFLINLEGKAVHTLLTSKSGSDVASVVVLLFMLGVSTAELSREVEQWKRLPDRLHDFWNW---LDACNIMLVF---VVGITYMSG---WQHTRALL----AVSVYLRWFGSLYYMQAFKRTGPLVRMVLVICFDMRFFLMLLGISIMAAWVAFRVLLIQGTAGYDEALGDPA----------NGLLVMFNML---------------LLVDFDIATL----------------------GGEYVVLVRIIFLLSMILVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILREQEAFMSEAKKKDPRIFPKWLHVLVPK---GGGVGRPPATEQWLGVLHVLRSGIDALSAKL 1560          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: CEL92871.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 90.9 bits (224), Expect = 1.600e-14
Identity = 115/455 (25.27%), Postives = 195/455 (42.86%), Query Frame = 0
Query:  202 ILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTA---GLVWQGLLLANAFPLVCQEYWQW-------HAQGFRAYFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHF--KVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAG------ADRWGGRLRQIYKKI-----EHS---EKRLSQDIEGLFNAVGRERKEGGGVMEGGVGTRLARLEDNVEGLQGKLDQILAML 631
            IL +KW  +G P+Y   L L LL  L + + S +++  +  +  WR T      +W  +  A    L+    +           + FRA+F  W   LD+   +   A I+  +         +  R++  MLS+I + LLW+K++ + RGF+ TG  IRMI ++V D R F+ V+ + ++GF +  ++L+          G + P                    S     ++  S+   LTS+  F      P +    P            HF    L+ ++++      TI++ NLLI++MGD++D+V+   +     E+A  +LE E  +P+        FPR++ V         G+V   G       D W GRL Q+ K +     EH    +KRL        +AV R  +E    +   + +RL  ++  V  LQ + + I A L
Sbjct: 1421 ILSFKWQKYGGPMYRRRLLLQLLFLLVFFIHSCVIVKYMGDD--WRETVRSWNPMWGWITAAARLLLIILSLFLGLKILLLVRKRHFRAFFSVW-TWLDISACVFVMAFIICEYL--------DCDRSVEAMLSSITAVLLWSKMIYFCRGFEGTGHQIRMIQEVVYDMRHFIAVMLIMIVGFGHAFHVLYLHP-------GYSRP--------------------SQWVEATAVSSTLIFLTSIGEFYEDVVSPEIQDPSP------------HFLRGFLICVLFVLATFFVTIVMFNLLISIMGDTHDRVKLQEIVAQNRERAELLLEYEQQVPRGA---SSLFPRYLFV---------GLVGSRGLHELDEQDEWEGRLSQMKKAVRAELAEHQQNVDKRLEVLRMSNRDAVRRSIQE---ALAEDMASRLEPVQQTVLALQVQQEDIQASL 1810          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_004990758.1 (hypothetical protein PTSG_12745 [Salpingoeca rosetta] >EGD77414.1 hypothetical protein PTSG_12745 [Salpingoeca rosetta])

HSP 1 Score: 89.4 bits (220), Expect = 4.600e-14
Identity = 79/304 (25.99%), Postives = 138/304 (45.39%), Query Frame = 0
Query:  324 LSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGL-------FNAVGRERKEGGGVMEGGVGTRLARLEDNVEGLQ 621
            +++ AS+ LW ++L +LR F+ TG L+RM+++I   T  FL++L V ++G +NC ++LF   I  EDA+       S   S+F T  +L     +                                LPP   +            +V L+++ + V   I +LNL+I LM D   K+ +       +E+A  + EIE  +   +L +  FFPRW+ +L PK G  G      G D W G ++ I  +    E+R    ++ L       F+A+ + + +  G ++  V  ++  L D++  +Q
Sbjct: 1114 VTSAASFFLWLEILYFLRAFEFTGGLVRMVFKIFYYTGPFLLILVVVLLGTANCFHVLF-STIPSEDALFQIDD--SVMDSVFKTFKLLLLGDGTVEE----------------------------GLPPDDAV----------TGVVKLLFVVFMVGINIFMLNLMINLMDDFMQKINDEEGDAFPFEKARIIAEIELSMGDELLSNKTFFPRWLHMLTPKGGELGER---EGIDEWQGTVQAIRAENMGLERRTRDTLDRLQAHIITHFDAMEKRQTDRIGSLDDRVNNKIEALADSMNRMQ 1373          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: PNH05258.1 (WD repeat domain-containing protein [Tetrabaena socialis])

HSP 1 Score: 89.4 bits (220), Expect = 4.600e-14
Identity = 102/384 (26.56%), Postives = 172/384 (44.79%), Query Frame = 0
Query:  202 ILKYKWTAF-GRPIYTGLLALSLLLALNYSLASALL----LPLLHSNAPWRRTAGL------VWQGLLLANAFPLVCQEYWQWH------AQGFRAYF------FSWFRLLDLLTLLLTFASILLRF-------FLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQED----IQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGG 552
            +++YKWTAF GR  +   +  ++ LA   +  +  +     P     A       L       W+  +LA    +V   ++ W       A G   Y       ++W   +DL+T  L  AS+ LR               ++E  R L   L+AIA   L  K L   RG + TGPL+RM+ +++ D RFFL +L V +M F + ++++F       +  + +  TTS   ++  +      + +      +     S  + +++T+  + +              G+ D+     S F     L+Y+ +    TII+LNLLIA+M DSY  V+E+A +    E+A  + EIE  +P+R+LQ P +  +W+ VL P    DGG
Sbjct:  831 VMEYKWTAFAGRAFWMQSVLHAVFLAAFVAATAGSVHRRSFPATAGTAQPTTVGRLYNFPEDTWR--VLAELVVVVMNLWYLWGEASQIVALGLTTYLGLAGAVWNW---IDLVTCFLILASMALRASPAVCMQHTCHRVADREEERVLLG-LTAIA---LGLKTLKVARGLERTGPLVRMLLRVLVDIRFFLAILVVIMMAFCHAMFIVFNGTAVLVMPVDPSTATTSDGSATSSTASGGARLDYLLQRGITYDNDYSGYARSMITAYRLMI--------------GDYDFAALEHSRFFYFGWLLYVAFTFLVTIIMLNLLIAIMSDSYAVVKEHARSGWLLERARIITEIEQGMPRRLLQGPPYKVKWLHVLTPTEETDGG 1191          
BLAST of NO02G00340 vs. NCBI_GenBank
Match: XP_001750707.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ84520.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 86.7 bits (213), Expect = 3.000e-13
Identity = 104/439 (23.69%), Postives = 188/439 (42.82%), Query Frame = 0
Query:  187 RTGKTWIFELEAPSLILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTAGLVWQG--------LLLANAFPLVCQEYWQW-HAQGFRA---------------YFFSWFRLLDLLTLLLTFASILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLIRMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRSSYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLSLPPTGNL-DYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDKVQENALAQGR--------------YEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGL 587
            R G   +F  +    IL +KW  + R ++   L   ++  L +++ + L   L      +       W G        ++ A ++  +  EY Q+  A+G ++                    + LL ++  ++TFAS  L    + G        + + ++S+IA++  W ++L Y R F+ TG L+RM++++   T  ++++L+V ++  +NCLY+LF  DI+ E+            GS+FH  L               SP     +T   V L              GN+ + LP +    K LV +++  + V   I +LNL+I L+ D   K+  + L   R              +E A  + EIE ++P   L+    FP W+ +LRPK   D  +   AG D W G ++ I  +  H E++  + +  +
Sbjct:  811 RAGNAQLFGNDIMKSILHFKWETYARGLFFRELGYFVMFLLAFTVFTLLAAQLDRHAYSFLELWTGSWAGFICCSLSMMIPAYSYRHLLIEYQQFLRAKGDQSLSGGTDLSGINAALTVLVDGWNLLGIILAVMTFASCCL---WIMGS-------SAFAIVSSIAAFANWIQILYYFRAFELTGGLVRMVFKVFYYTGPYMMILSVVLLATTNCLYVLF-SDIETEE------------GSVFHQTL---------------SPLHALFVTFNMVLL------------GEGNVTEGLPGDRPFVKALVIILFSLFMVAINIFMLNLMINLLDDFMQKLARSCLTHTRAFHQINDDEGDAFPFELARIIAEIELLMPLDDLRKAALFPEWLHILRPK--GDELLRLTAG-DAWKGTVQAIKNENNHLERKYQKALANM 1196          
The following BLAST results are available for this feature:
BLAST of NO02G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30632.14.000e-15968.21wd-40 repeat protein [Nannochloropsis gaditana][more]
XP_004988269.15.800e-1725.58hypothetical protein PTSG_10886 [Salpingoeca roset... [more]
XP_004996926.19.900e-1723.53WD-40 repeat protein [Salpingoeca rosetta] >EGD817... [more]
XP_004998276.11.700e-1624.91serine/Threonine protein kinase [Salpingoeca roset... [more]
XP_004993290.11.100e-1526.86hypothetical protein PTSG_06401 [Salpingoeca roset... [more]
XP_004992021.13.200e-1526.96WD-40 repeat protein [Salpingoeca rosetta] >EGD755... [more]
CEL92871.11.600e-1425.27unnamed protein product [Vitrella brassicaformis C... [more]
XP_004990758.14.600e-1425.99hypothetical protein PTSG_12745 [Salpingoeca roset... [more]
PNH05258.14.600e-1426.56WD repeat domain-containing protein [Tetrabaena so... [more]
XP_001750707.13.000e-1323.69hypothetical protein [Monosiga brevicollis MX1] >E... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006612NSK006612Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00340.2NO02G00340.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G00340.1NO02G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610140gene_10195Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100836g2gene40Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00340.2NO02G00340.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G00340.1NO02G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00340 ID=NO02G00340|Name=NO02G00340|organism=Nannochloropsis oceanica|type=gene|length=3476bp
AAGAAACTCAAGAACATGAAAGAAAGACGTAGTAAAAAATGGGCAGAGGG
AGGGAGGGGAGGAGGGAACACGAATAGCTGCTCGTGCATTCAAACATTTT
CATACTTTCCTCCTCCCACTTATACCTATTTATACATTGCACCTTCCTAT
GTATGCATGTATATGTACGTACTCATGTACGATAGAATACCCCTCCCTCC
TGGAAACGTCGGCGGTGCGGAGTTTTTTCAACTTGCAGgtacgggaggga
gggagggagggagggagggaggggatacaaatgtacgcccgaccaagccc
aacacatctggattctatccttcccttccccctcttctccttccacttcc
tccgcccagCCCTCCTGTGCAGGCGTCGTTGACTTGGAGGCGGAAGAATC
CGATTACCGAGCGAACCTTGGGCCGGGGGAGAGCAAGACCCTCGGGTCGG
CAGAGGCATTCCCTCTCGGgtgaggagggagggagggaggaggggaggaa
gggagggagggaggccgggggagagcaagaccctcgggtcggcaaaggca
tctccttccctccctccctcacttccttcttccctccctccctccctccc
tccctccctccctctcttcctccctccctctttccgcagCTTCTGGGCCG
CGCACATCAACAACAAGACAAGGAAACCCTCGCTCTTTTCTAAGGAGGGG
CTGCGGCTCCTCACGTCTCCCCGGAGATGGGAGGGCGAGGGGGAGGGAGG
GATAGAGGGGGGGGTGCTGAGGGGGAGCAGTGGCATGCTGCCTTCTCCTG
GAGGAGGGGAAGGAGGAGACGGGAGGTATAGACGACTCGCCAGCAGCAAA
TATCTGCTCCATGCGGACATTTCGCATGTgtaggtgaagggagggaagga
gggagggaaggagggagggaaggagggagggagcactaatggcacttcgg
ccataaaataatccacatttcgctctctcttcttcccccgtcgccttccg
cagGTACCACGAAATCACCGAGACGAGCGGTGTGGAGGTGGAGGCCGCAC
TGGTCGCTTTCCCGGCCGCCCTCCGgtacgacccaccccgcccccctccc
tccctccctccctcccttccgctgtcctcacatccactccccccttccct
gcccagCTCTGGCCAAGATTCTTTCCTGAGACTGTGCTGTGATCTGTACG
AGCGCACGGGCAAGACGTGGATCTTCGAGCTGGAGGCCCCTTCGCTCATC
CTCAAGTACAAATGgtgagggagcgacggagggagggagagggtgggagg
gtattgaatgagtgtcatccgtcgtgctcttgtatcttcaagaatgaagc
tctaaccttcctccgtcccttcctccctcccgccctcagGACTGCCTTCG
GCCGGCCCATCTACACAGGACTCCTCGCCCTCTCCCTCCTCCTGGCCCTC
AACTACTCCCTCGCTTCCGCCCTCCTCCTCCCCCTCCTCCACTCCAACGC
TCCCTGGAGACGCACCGCGGGCCTGGTCTGGCAAGGACTCTTGCTCGCGA
ACGCCTTCCCGTTGGTATGTCAGGAATACTGGCAGTGGCACGCGCAGgta
gggggggggggagggagggagggagggtagagaacgtcagaccaacctac
atcatcctcatccttcttgactctctctccctctctctctccttcgttct
ctccttctctccctcccttagGGCTTCCGCGCCTACTTCTTCTCTTGGTT
CCGTCTGCTGGACCTGCTGACACTCCTCCTGACTTTTGCCTCGATCCTCC
TCCGCTTCTTCTTGGTGAAGGGAGAGGGAGAAAAAGAGAACATTCGCACT
CTTTATCACATGCTTTCAGgtactgtgagagggagggagggggggagggg
gggtagaaaggaagaagcgcatgcactcaaaacaatgtcggtcctccctc
cctccctccttcccctctcttcctcccttcctcccccccttccgcagCCA
TCGCCTCCTGGCTGCTGTGGGCCAAGCTCCTTGTCTATCTAAGAGGTTTT
AAGGAGACTGGGCCCTTGATTCGAATGATCTGGCAGATCGTCAAGGACAC
CCGCTTTTTCCTGGTGgtgcgtgaaacccttccctccctccctccctccc
tccctccctccctccctccctccttctctgcctgcttccaaccaacatga
ttgttgggatcacgggcgtggcgaacctcacattccttccgtccctccct
ccctccctccctccctccttcttctcaagGTCCTGGCCGTCTCTGTGATG
GGCTTCAGCAATTGCCTTTACCTCCTCTTCCAAGAAGACATTCAGCGCGA
AGACGCCATGGGCACGACAAGCCCCATCCGATCGAGgtagggagggaagg
aggggtgcctaaccgtggcttgtcggtataaatcattgatccttgatcct
ttttcgctccacatcctcattttcatcctccggcccatactcctgtcctc
ggcacagCTACGGCTCCCTCTTCCATACGGTCCTCGTCCTCTTCGCCGCT
CTCAACAGTACGTCCGCCCTTCCTTCTTCCTCGCCGTCTTCCTTTGCCCT
TCTCACCTCCCTTCCCGTCTTCCTTTTCCCTTTCCCTCCTCCTCACCTCC
TTTCCCTCCCTCCCACAGGTAACCTGGACTACCTGCCCTTCAACGCCTCC
CATTTCAAGGTCCTGGTCTCGCTCATCTACCTCTTTTACTGCGTGTGTAG
CACCATTATCTTGCTGAACCTGCTCATCGCCCTCATGGGAGACTCCTATG
ACAAGGTTCAGGAGAACGCCCTGGCCCAAGGCAGATACGAACAGgtggac
agaaagggagagagggaaggaaagttggagggaagagggaaagaagaagg
ggttgtgacacattccagattccaggtatattttttaatgctgcttcatc
ccatccctttattgtcctagGCCGTTTCCGTGCTAGAGATTGAAGACATG
CTCCCCCAACGCATTCTGCAGGATCCCCGCTTCTTCCCGCGgtaggtccc
tccttccctccgcccagcgtctctttctctttatttatcagcttccatct
aactctctcttttcgtttcatccctccacatccatcaagGTGGGTGCAAG
TTCTCCGGCCCAAGCCCGGGGCTGACGGCGGCATGGTGTGTGACGCTGGT
GCGGATCGGTGGGGTGGTCGACTCAGACAGATTTACAAAAAGATAGAACA
CAGCGAAAAACGATTGAGTCAAGACATTGAGGGGTTGTTTAACGCGGTGG
GGAGGGAGAGGAAAGAAGGAGGAGGGGTGATGGAGGGAGGGGTGGGGACG
CGGTTGGCGCGCTTGGAGGACAACGTGGAGGGCCTGCAGGGCAAGTTGGA
CCAAATTTTGGCCATGTTGCACTCAGCGGTCCAGGACGACGATACCTCTG
ACGAGGAAGACGAGACAAGCCGATAG
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protein sequence of NO02G00340.2

>NO02G00340.2-protein ID=NO02G00340.2-protein|Name=NO02G00340.2|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MYACICTYSCTIEYPSLLETSAVRSFFNLQPSCAGVVDLEAEESDYRANL
GPGESKTLGSAEAFPLGFWAAHINNKTRKPSLFSKEGLRLLTSPRRWEGE
GEGGIEGGVLRGSSGMLPSPGGGEGGDGRYRRLASSKYLLHADISHVYHE
ITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPS
LILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTA
GLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFAS
ILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLI
RMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRS
SYGSLFHTVLVLFAALNSTSALPSSSPSSFALLTSLPVFLFPFPPPHLLS
LPPTGNLDYLPFNASHFKVLVSLIYLFYCVCSTIILLNLLIALMGDSYDK
VQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPRWVQVLRPKPGADG
GMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLFNAVGRERKEGGGV
MEGGVGTRLARLEDNVEGLQGKLDQILAMLHSAVQDDDTSDEEDETSR*
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protein sequence of NO02G00340.1

>NO02G00340.1-protein ID=NO02G00340.1-protein|Name=NO02G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=612bp
MYACICTYSCTIEYPSLLETSAVRSFFNLQPSCAGVVDLEAEESDYRANL
GPGESKTLGSAEAFPLGFWAAHINNKTRKPSLFSKEGLRLLTSPRRWEGE
GEGGIEGGVLRGSSGMLPSPGGGEGGDGRYRRLASSKYLLHADISHVYHE
ITETSGVEVEAALVAFPAALRSGQDSFLRLCCDLYERTGKTWIFELEAPS
LILKYKWTAFGRPIYTGLLALSLLLALNYSLASALLLPLLHSNAPWRRTA
GLVWQGLLLANAFPLVCQEYWQWHAQGFRAYFFSWFRLLDLLTLLLTFAS
ILLRFFLVKGEGEKENIRTLYHMLSAIASWLLWAKLLVYLRGFKETGPLI
RMIWQIVKDTRFFLVVLAVSVMGFSNCLYLLFQEDIQREDAMGTTSPIRS
SYGSLFHTVLVLFAALNSNLDYLPFNASHFKVLVSLIYLFYCVCSTIILL
NLLIALMGDSYDKVQENALAQGRYEQAVSVLEIEDMLPQRILQDPRFFPR
WVQVLRPKPGADGGMVCDAGADRWGGRLRQIYKKIEHSEKRLSQDIEGLF
NAVGRERKEGGGVMEGGVGTRLARLEDNVEGLQGKLDQILAMLHSAVQDD
DTSDEEDETSR*
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Synonyms
Publications