NO01G05650, NO01G05650 (gene) Nannochloropsis oceanica

Overview
NameNO01G05650
Unique NameNO01G05650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2258
Alignment locationchr1:1572653..1574910 -

Link to JBrowse

Properties
Property NameValue
DescriptionNMT1/THI5-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1572653..1574910 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009228thiamine biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR027939NMT1/THI5
IPR015168SsuA/THI5
Homology
BLAST of NO01G05650 vs. NCBI_GenBank
Match: EWM22780.1 (NMT1/THI5-like protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 233.8 bits (595), Expect = 7.500e-58
Identity = 116/142 (81.69%), Postives = 134/142 (94.37%), Query Frame = 0
Query:    1 MPRPRVFFQGDYELLSSQFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGST 143
            MPRPRVFFQGDYELLSSQFAGLVVAAK G+F+++GID++LRG+VRPGSEADVVA IQEAVG++G +ALGCAEQNIVVPAQ  GAPV+V+SAMYHKSPLGLGLLP+SRITSLKELA R+ RVGMLADSL+LAQR++HQA GS+
Sbjct:   12 MPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQRLLHQAVGSS 153          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_088890299.1 (hypothetical protein [Leptolyngbya ohadii])

HSP 1 Score: 138.7 bits (348), Expect = 3.300e-29
Identity = 95/308 (30.84%), Postives = 158/308 (51.30%), Query Frame = 0
Query:   18 QFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPF--LPSLGYAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLDTTLWA 324
            QFAGL++A   G+++  G+ V     ++P +   VV   +E V  K  + +GC+EQN+++ AQ  GAP+K I+ M+  SP  L  +P S I +L +L  +  +VG+  D + + +  + +   +      EVVE+  ENK+  L++G+  AIQ Y   EP+  Q + G  P  LP        YAQ  F   T L  ++  + +  FLA  ++GW+ A  D  ATA LI E   E     TN      EY ++ L  ++ YV    G++++G + P  + + +    +  ++  +    KSLD +LW+
Sbjct:   51 QFAGLLLADHLGLYEQSGLTV----AIKPWASGMVVP--EEVV--KNPMMIGCSEQNLILEAQAQGAPLKAIATMFQASPYALMAMPDSGIRTLSDLVGK--KVGIHVDGIKVME--LVKGVNNLPPDAIEVVEIPYENKLDRLVSGEFAAIQCYAVDEPIAFQQKVGAEPTLLPMDEYGYKAYAQVFFTTDTVL--QEAPEQVKRFLAASFEGWQRAFADIPATAKLIAETYAEKGSKYTN-----VEYQQQSLELVKQYVMRGIGEAQLGTILPEQWQQTADLMAQYDIIDASPTVQKSLDLSLWS 339          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: KPQ36054.1 (ABC-type uptake system substrate-binding component [Phormidesmis priestleyi Ana])

HSP 1 Score: 131.7 bits (330), Expect = 4.000e-27
Identity = 102/325 (31.38%), Postives = 157/325 (48.31%), Query Frame = 0
Query:    2 PRPRVFFQGDYELLSSQFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPFLPSLG---YAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLDTTLWA 324
            P+  +  Q D++  + QFAGL++A    ++  +G+DV L          D VAA            +GCAEQN+++ AQ  GAP+K ++ M+  SPLGL  LP ++I +L +L  R  +VGM  D   LA   + Q     ++   EVVE+  ENK  LLL+G+L AIQ Y   EP+    +    P  L  L   G   YAQ IFAH+  +  E   + ++ FL   + GW  AL+D  A AA ++     A       K E  +Y  + L  +  Y+      + +G +D   +   +  F +  ++ +A     SL   LW+
Sbjct:   36 PQTSLTMQLDWK-FNVQFAGLLLAKGAELYADQGLDVTLMPWESGVVVPDKVAA--------DPTVIGCAEQNLILAAQAAGAPIKAVATMFQASPLGLMTLPDAQIATLDDL--RGKKVGMHVDG--LAVMALVQGVNELASDAIEVVEIPYENKYDLLLSGELAAIQCYAVDEPIGFASQYEIEPSVLK-LADYGYEAYAQVIFAHNDLI--ESSPEQLSNFLQATFNGWSIALSDIPAAAAAVV-----ARYVEPGSKYEDVDYQTQSLSLIADYMLRGIEPAALGTIDRDRWQLMAERFAEYRIIEQAPQLQNSLTAELWS 339          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_006617879.1 (hypothetical protein [Arthrospira platensis] >BAI88098.1 putative secreted protein [Arthrospira platensis NIES-39] >KDR58233.1 hypothetical protein APPUASWS_006285 [Arthrospira platensis str. Paraca])

HSP 1 Score: 129.8 bits (325), Expect = 1.500e-26
Identity = 96/317 (30.28%), Postives = 162/317 (51.10%), Query Frame = 0
Query:    5 RVFFQGDYELLSSQFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMM-HQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPF--LPSLGYAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLD 319
            ++  Q D++  ++QFAG+++A    ++K+ G+ V     + PG  A +V      V E   + +GC EQ+I++ AQ  G P+K I+ M+  SPLGL  +P+S+I  L++L  +  RV M  +S ++ Q +M H   GS      EV+ V+ E K  LLL G +DA+Q Y   EP+    +TG  P  + F       Y Q IFAH+  L  +   +++ TFL   + GW  AL+D    A +I+     ++ A T  + +  +Y    L+ +  YV      + +G +D   +   +  F K G+++     + S+D
Sbjct:   41 QIIMQLDWK-YNAQFAGVLLADYYNLYKSSGLAV----EILPGETAMIVT---NQVAENPAM-IGCGEQDIIMNAQIAGKPIKAIATMFQNSPLGLMSMPNSQIYDLQDLIGK--RVAMQGESYSIMQMVMGHNNIGSDEI---EVILVSGEEKHDLLLRGDVDAVQCYIVDEPIGFAAKTGITPNTMKFSDYGYDAYVQVIFAHNKLL--QYHPEIVHTFLEVTFAGWRLALDDVEKAAEIIV-----SNYAETGGEYDDLDYQIASLKQVANYVTAGITDNDLGKIDGDRWQSMATKFEKYGIINDVPLFSNSVD 336          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_006622523.1 (MULTISPECIES: hypothetical protein [Arthrospira] >EDZ94437.1 NMT1/THI5 like domain protein [Arthrospira maxima CS-328] >EKD09528.1 hypothetical protein SPLC1_S180010 [Arthrospira platensis C1] >AMW26781.1 hypothetical protein AP285_00995 [Arthrospira platensis YZ])

HSP 1 Score: 128.3 bits (321), Expect = 4.500e-26
Identity = 93/316 (29.43%), Postives = 161/316 (50.95%), Query Frame = 0
Query:    5 RVFFQGDYELLSSQFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPF--LPSLGYAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLD 319
            ++  Q D++  ++QFAG+++A    ++K+ G+ V     +RPG  A +V   Q A   K    +GC EQ+I++ AQ  G P+K I+ M+  SPLGL  +P+S+I  L++L  +  RVGM  +S ++ Q  M     +  ++  E++ V+ E K  LLL G++DA+Q Y   EP+    +TG  P  + F       Y Q IFAH+  L  +   +++  FL   + GW  AL+D    A +I+      + A    + +  +Y    L+ +  YV        +G ++   +   +A F K G+++     + S+D
Sbjct:   41 QIIMQLDWK-YNAQFAGVLLADYYNLYKSSGLAV----EIRPGETAMIVTN-QVA---KNPAIIGCGEQDIIMNAQIAGQPIKAIATMFQNSPLGLMSMPNSQIYDLQDLIGK--RVGMEGESYSIMQ--MAMGYDNIPSHAIEIILVSGEEKHDLLLRGEVDAVQCYIVDEPIGFAAKTGITPNIIKFSDYGYDAYVQVIFAHNELL--QYHPEIVQKFLEVTFAGWRLALDDVEKAAKIIVN-----NYAEPGGEYDDLDYQIASLKQVANYVTGGLTDKNLGKINSDRWQSMAAKFEKYGIINDVPLFSNSVD 336          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_008056299.1 (hypothetical protein [Arthrospira sp. PCC 8005] >CCE19962.1 conserved hypothetical protein [Arthrospira sp. PCC 8005] >CDM98466.1 conserved hypothetical protein [Arthrospira sp. PCC 8005])

HSP 1 Score: 127.9 bits (320), Expect = 5.800e-26
Identity = 91/316 (28.80%), Postives = 162/316 (51.27%), Query Frame = 0
Query:    5 RVFFQGDYELLSSQFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPF--LPSLGYAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLD 319
            ++  Q D++  ++QFAG+++A    ++K+ G+ V     +RPG  A +V      V +  G+ +GC EQ+I++ AQ  G P+K I+ M+  SPLGL  +P+S+I  L++L  +  RVGM  +S ++ Q  M     +  ++  +++ V+ E K  LLL G++DA+Q Y   EP+    +TG  P  + F       Y Q IFAH+  L  +   +++  FL   + GW  AL+D    A +I+      + A    + +  +Y    L+ +  YV        +G ++   +   +A F K G+++     + S+D
Sbjct:   41 KIIMQLDWK-YNAQFAGVLLADYYNLYKSSGLAV----EIRPGETAMIVT---NQVAKNPGI-IGCGEQDIIMNAQIAGQPIKAIATMFQNSPLGLMSMPNSQIYDLQDLIGK--RVGMEGESYSIMQ--MAMGYDNIPSHEIKIILVSGEEKHDLLLRGEVDAVQCYIVDEPIGFAAKTGITPNIIKFSDYGYDAYVQVIFAHNELL--QYHPEIVQKFLEVTFAGWRLALDDVEKAAKIIVN-----NYAEPGGEYDDLDYQIASLKQVANYVTGGLTDKNLGKINSDRWQSMAAKFEKYGIINDVPLFSNSVD 336          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_083624879.1 (hypothetical protein [Planktothrix serta] >CUR19986.1 conserved hypothetical protein [Planktothrix serta PCC 8927])

HSP 1 Score: 127.9 bits (320), Expect = 5.800e-26
Identity = 93/308 (30.19%), Postives = 154/308 (50.00%), Query Frame = 0
Query:   18 QFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIP---EVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPF--LPSLGYAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLDTT 321
            QFAGL++A   G+++ +G++V ++         ++   I E V E   + LGC EQ+ ++ AQ  G P+K I+ M+  SPLGL  LP   I SL +L  +  +VGM  ++  + + +M     +TS  +P   E+V ++ ++K   L +G+L A+Q Y   EP+    +TG  P+ L F       Y Q IFAH   L +  QR  +  FL   +QGW+ ALND    A ++++            K    +Y  + L+ +  Y+       ++G +    + E S  F + G++  A   A SLD+T
Sbjct:   48 QFAGLLLADYYGLYQQRGLEVEIK-------SVNLHRGIFEQVAE-NPLILGCGEQDAILAAQVQGYPIKAIATMFQASPLGLMSLPEKNIQSLHDLVGQ--KVGMQGNTKKVMEFVM-----NTSGLLPQDIEIVPISYQDKYDRLQSGELAAVQCYIVDEPLGFNSQTGILPQILKFSDYGYDAYVQVIFAHQWLLEHNPQR--VNQFLKASFQGWKLALNDINQAAKIVVD-----FYTKPQSKYHNLDYQTQSLKLISDYITFGINPEQIGSISANRWQEMSEKFAQYGMIESAPQLADSLDST 333          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_106174921.1 (hypothetical protein [filamentous cyanobacterium CCP2] >PSB10604.1 hypothetical protein C7B76_24045 [filamentous cyanobacterium CCP2])

HSP 1 Score: 126.7 bits (317), Expect = 1.300e-25
Identity = 93/308 (30.19%), Postives = 153/308 (49.68%), Query Frame = 0
Query:   18 QFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPF--LPSLGYAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLDTTLWA 324
            QFAGL++A   G+++ +G+ V     ++P        ++ + V E   + +GCAEQN+++ AQ  G P+K I+ M+  SP GL  LP S +TSL +LA ++  VG+  D +     +M    G +     EVVE+  E+K+  LL+G+  A+Q Y   EP+    + G  P  LP        YAQ +F     L  E+Q + I  FL   ++GW  AL++   TA  I++       A    K    EY  + L  ++ YV     +S++G + P  + E +A   +  ++        S+D +LW+
Sbjct:   55 QFAGLLLADYLGLYRQRGLTV----EIQPWESG---MSVTQTVAE-SPMVIGCAEQNLILDAQAQGLPLKAIATMFQASPYGLMSLPDSGVTSLSDLAGKQ--VGVHIDGI----NVMELVKGVSGVSDIEVVEIPYEDKLDRLLSGEFAALQCYAVDEPIGFLRQVGELPIVLPMDEYGYAAYAQVLFTTDALL--EQQPEQIKDFLEASFEGWTIALDNIITTAQTIVQ-----EYADPTSKYFDLEYQIQSLELVKEYVVRGISESQIGTISPERWQEVAARMAEYNIIDSLPDINHSIDLSLWS 341          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_006456758.1 (hypothetical protein [Synechococcus sp. PCC 7335] >EDX86974.1 NMT1/THI5 like family [Synechococcus sp. PCC 7335])

HSP 1 Score: 125.9 bits (315), Expect = 2.200e-25
Identity = 101/308 (32.79%), Postives = 149/308 (48.38%), Query Frame = 0
Query:   18 QFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPFLPSLG---YAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLDTTLW 323
            QFAGL++A   G++ A+G+ V L+       E+ VV  + E V     V +GCAEQN+++ AQ  GA +K ++ M+  SPLGL  LP S I++L++L  +  +VGM  D   LA   + Q A        EVVE+  E+K  LLL+G+L AIQ Y   EP+    +    P  L  L   G   YAQ IFAH+  +    ++  ++ FL   + GW  AL D  A AA ++     A       K E   Y    L  +  Y+        +G++D   +   +  FV   ++  A     SL   LW
Sbjct:   50 QFAGLLLADGLGLYSAEGVAVDLK-----PWESGVV--VPEVVAANPSV-IGCAEQNLILAAQADGATIKAVATMFQASPLGLMTLPDSEISTLEDLVGK--KVGMHVDG--LAVMALVQGASDLGETAIEVVEIPYESKYDLLLSGELAAIQCYAVDEPIGFAAQYQIVPNVLK-LADYGYEAYAQVIFAHNELIATAPEQ--VSGFLKGAFGGWAIALEDIPAAAATVV-----ADYVEPGSKYEDVAYQTASLELISEYMLLGIEPPSLGIIDSDRWMRMAEQFVAYNIIETAPSLEASLTQELW 337          
BLAST of NO01G05650 vs. NCBI_GenBank
Match: WP_009787645.1 (hypothetical protein [Lyngbya sp. PCC 8106] >EAW33799.1 hypothetical protein L8106_25967 [Lyngbya sp. PCC 8106])

HSP 1 Score: 125.2 bits (313), Expect = 3.800e-25
Identity = 97/314 (30.89%), Postives = 160/314 (50.96%), Query Frame = 0
Query:   18 QFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEADVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGLGLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPE--VVEVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPFLPSLG---YAQAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARREAHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGK---SKMGLVDPGVYDEASAFFVKAGLLSKAFPQAKSLDTTLWA 324
            QFAG+++A    +++ +G+ +     ++P    D    I + V E   + LGCAEQ++++ AQ  G P+K I+ M+  SPLGL  +P + ITSL +L  R   VG+  D+    Q++M    G +     E  V++++ + K   LL G++DAIQ Y   EP+    ETG  P  +  L   G   Y Q IFAHS+ L  E QR+ +  FL   +QGW+ AL +    A +++E     +      K    +Y  + L+ +  Y+   +GK     +GL+ P  +   +   V+  ++  A   + SLD +LW+
Sbjct:   56 QFAGVLLADYYQLYQKEGLKI----NIQPW---DFGLDILDVVAENPTI-LGCAEQDVILAAQAAGKPIKAIATMFQTSPLGLMSMPDNNITSLHDLVGR--TVGIHGDT----QKVMDLVMGFSQLSSDEIKVIDISYDEKYDKLLTGEVDAIQCYLVDEPIGFAYETGIEPIVIR-LSDYGYDAYVQTIFAHSSLL--ETQREQVQAFLKATFQGWKIALENIPQAAKIVVE-----NYVNPKSKYNNLDYQTQSLKLISNYI--TSGKRLDQPLGLISPERWQSMTKRLVQYHIIQTAPNLSDSLDLSLWS 345          
The following BLAST results are available for this feature:
BLAST of NO01G05650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22780.17.500e-5881.69NMT1/THI5-like protein, partial [Nannochloropsis g... [more]
WP_088890299.13.300e-2930.84hypothetical protein [Leptolyngbya ohadii][more]
KPQ36054.14.000e-2731.38ABC-type uptake system substrate-binding component... [more]
WP_006617879.11.500e-2630.28hypothetical protein [Arthrospira platensis] >BAI8... [more]
WP_006622523.14.500e-2629.43MULTISPECIES: hypothetical protein [Arthrospira] >... [more]
WP_008056299.15.800e-2628.80hypothetical protein [Arthrospira sp. PCC 8005] >C... [more]
WP_083624879.15.800e-2630.19hypothetical protein [Planktothrix serta] >CUR1998... [more]
WP_106174921.11.300e-2530.19hypothetical protein [filamentous cyanobacterium C... [more]
WP_006456758.12.200e-2532.79hypothetical protein [Synechococcus sp. PCC 7335] ... [more]
WP_009787645.13.800e-2530.89hypothetical protein [Lyngbya sp. PCC 8106] >EAW33... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05650.1NO01G05650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101401g2gene7666Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05650.1NO01G05650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05650 ID=NO01G05650|Name=NO01G05650|organism=Nannochloropsis oceanica|type=gene|length=2258bp
ACAGTCAAACCCCCTCTGTTGCAGCCATGCCGCGGCCCCGGGTGTTCTTT
CAGGGCGACTATGAGTTACTCTCTTCCCAGgtaaaggcgctcagacctcc
cctccccctcctccgcccctctccttctcgatctctattactcaccctcc
gtcttacttcttccttgtattccctccactctcgtagTTCGCCGGTCTCG
TCGTCGCTGCCAAAAAGGGTATATTTAAGGCCAAAGGCATTGACGTGATC
TTGCGCGGGAGGGTACGGCCGGGTTCGGAGGCCGATGTGGTGGCCGCCAT
CCAGGAAGCAGTGGGGGAGAAGGGCGGTGTGGCCTTGGGGTGTGCAGAGC
Agtgagttttggcaaggaggggctaacaggagtgaaggagggagggaatt
gctgaataagtcggggttgccgtcttctccatcatatccacctaccctcc
gtcccatccctccctccctccctcactcagAAACATTGTCGTGCCCGCCC
AACACGGCGGCGCCCCCGTCAAAGTCATAAGTGCCATGTACCACAAGAGT
CCCCTAGGGCTCGGTCTTCTACCCTCCTCCAGAATCACCAGCCTCAAgta
cgtcctcttaccctccctctttcccaccctccctccccctccctccctca
aacgctccctccctctttacattatgttactttcctattgctcagacatt
ccatcttttccttcgccctgtcatcctccccccccttctgtagAGAGCTC
GCCCACCGGGAGTCGCGGGTAGGCATGCTGGCCGACTCTTTAACCCTAGC
GCAACGAATGATGCACCAAGCCGCGGGCAGCACGAGgtagggggggaggg
ggagggggaggaggaacgggtagccacgcgcgatttccccgccgagagtc
atttgtgcgatccgtcgcgtatttcatcctccctcgctcccttcctcccg
tcctccctcccgtcctccctcccgccctccttcagTGCCTACATCCCTGA
GGTGGTGGAGGTGACCAACGAGAACAAAATCGGTCTTCTTTTAGCCGGAA
AGCTGGACGCTATTCAGgtaggcctccctccctccctccctccctccctt
atgtcctcaatcccacttctcgtcgcagaacccctccaaacctcattccc
cctccttcccgccctccctccttccctccttcccgccctccctccctccc
ctcctccctcccttccagATCTACGACGCCACCGAACCCGTAGAGATCCA
GATCGAGACGGGACACCCCCCACGTTTCCTCCCCTTCCTCCCCTCCCTCG
GCTACGCTCAAGCCATTTTCGCCCACTCCACGGCTCTGACGAACGAGAAA
CAGAGgtagggaggtagggagggagggaggaggtcgcaataagaaccgca
cgctcaatcccattcgccttatatatgcactctttcatttcacatgtgcc
ctccctccctccctccctccctcgtccagGGATGTGATAACGACGTTTCT
AGCCTGCATGTATCAAGGCTGGGAGGAGGCTCTGAACGACCCCCGGGCCA
CGGCCGCCCTCATCATGGAGGCACGGAGGGAGgtgaggagggagggaggg
agggagggagggagggagggaggagtggctgagttttgactcatgaggag
ggtggagcacggcgttgtgaagggggggggggcagggagggaagggggga
gggagtcctgatcctttgacgcctgctggcattatctttatttcacactc
gcccctccccttccccccctcctttcctccctctcaagGCCCACGTGGCG
GTGACCAACCCCAAAATCGAGAAGACGGAATACTTCGAGAAGGTTCTACG
CAACCTCGAGGCCTACGTCCGTCCTCCCGCAGGAAAGAGCAAGATGGgta
ggtcccctccctccctccctccctccctctcttcccctttccttcctctg
ccccctgttctaaagaataatgagataatgcgacctcacatcatttcgcg
catttcgggtggtcgaactatcaatcaaacacccccacacccccgttaag
cctttacctctcaccctctctccctccctccctccctccctctcccagGT
CTTGTGGACCCCGGCGTGTACGACGAGGCGAGTGCGTTTTTCGTGAAGGC
CGGCTTACTGTCCAAGGCCTTCCCACAGGCCAAGAGCCTGGACACCACTC
TCTGGGCATGAGGGGAGGGAGGGAGGGAGGGGTGTGCAGGAAATTTGGGT
GATGGGAG
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protein sequence of NO01G05650.1

>NO01G05650.1-protein ID=NO01G05650.1-protein|Name=NO01G05650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=324bp
MPRPRVFFQGDYELLSSQFAGLVVAAKKGIFKAKGIDVILRGRVRPGSEA
DVVAAIQEAVGEKGGVALGCAEQNIVVPAQHGGAPVKVISAMYHKSPLGL
GLLPSSRITSLKELAHRESRVGMLADSLTLAQRMMHQAAGSTSAYIPEVV
EVTNENKIGLLLAGKLDAIQIYDATEPVEIQIETGHPPRFLPFLPSLGYA
QAIFAHSTALTNEKQRDVITTFLACMYQGWEEALNDPRATAALIMEARRE
AHVAVTNPKIEKTEYFEKVLRNLEAYVRPPAGKSKMGLVDPGVYDEASAF
FVKAGLLSKAFPQAKSLDTTLWA*
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