NO01G05620, NO01G05620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_022794564.1 (leukocyte receptor cluster member 8 homolog [Stylophora pistillata]) HSP 1 Score: 182.2 bits (461), Expect = 4.000e-42 Identity = 116/299 (38.80%), Postives = 159/299 (53.18%), Query Frame = 0 Query: 118 ADAEEIRRRQARAQRFAASSPXXXXXXXXXXXXXXXXQGNRNGKDVK-ETYHKRTRPLVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 AD + + Q RA+RF ++ +G+++ YH VGTC ++EK YLR DPSTVRP+ VL +++ +K+HW +DY Y C QLKS+RQDL VQ I DAFTV VYETHARIALE GD EF +L + L+A + EF AYRLL+ + + + L +EE+ PAI HA + SA A N+H FF LY AP+MS YL+D + R R AL ++ +Y P T+P F+ ELGF E EC ++++ Sbjct: 542 ADPKAQEKIQKRAERFKSTLAPQQATPTRILNTIHSLSFGEDGEEMDWSKYH-----TVGTCEDLEKPYLRLTSAPDPSTVRPVEVLGKSMEMIKSHWKEKQDYTYVCEQLKSVRQDLTVQGIRDAFTVKVYETHARIALEKGDREEFNQCQTQL---KALYAEN-----------LPGNVVEFTAYRLLYYILTKNTLDLTTALAHLTKEEK--ADPAIKHALLIRSAWALSNYHTFFQLYLNAPNMSGYLLDLFVQRERVQALKAMIKSYRP-TIPASFVESELGFIEEGECLKFLQ 818
BLAST of NO01G05620 vs. NCBI_GenBank
Match: OCK86037.1 (hypothetical protein K432DRAFT_388149 [Lepidopterella palustris CBS 459.81]) HSP 1 Score: 181.0 bits (458), Expect = 8.900e-42 Identity = 104/242 (42.98%), Postives = 144/242 (59.50%), Query Frame = 0 Query: 173 PLVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYV 415 P+VGTC E+EK+Y R P TVRPL VL + L +K W +Y Y C Q KS+RQDL VQHI++AFTV+VYE HARIALE GDLGE+ +L R L++ + EFLAYR+L+ ++ + + +L ++ A+ HA V SA A GN+HRFF LY AP+M +YLMD + R R AL+ + AY P+ + + FL++ELGFE++ EC E++ Sbjct: 252 PVVGTCQELEKKYFRLTAPPKPETVRPLVVLEQTLELLKKKWRQENNYGYICDQFKSLRQDLTVQHIKNAFTVNVYEIHARIALEKGDLGEYNQCQTQL---RALYSQN-----------LGGNPAEFLAYRILYFIHTCNRTDMNDVLADLTPADK--SQHAVQHALKVRSALAMGNYHRFFQLYLDAPNMGSYLMDMFIDRERLAALANICKAYKPD-VKIRFLTEELGFESDPECIEFL 476
BLAST of NO01G05620 vs. NCBI_GenBank
Match: OLL26432.1 (THP3 protein [Neolecta irregularis DAH-3]) HSP 1 Score: 181.0 bits (458), Expect = 8.900e-42 Identity = 122/311 (39.23%), Postives = 166/311 (53.38%), Query Frame = 0 Query: 108 KSNVPIPLLRADAEEIRRRQARAQRFAASSPXXXXXXXXXXXXXXXXQGNRNGKDVKETYHKRTRPLVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVEGKE 419 KSN PL +A E++RR+ RA+RF DV + + K T +VG C +EK YLR DP TVRPL +L++ L +K W +Y Y C Q KS+RQDL VQ I++ FTV VYE HAR+ALE GDLGE+ +L + H + F EFLAYR+L+ L+ + A + +L + E+ PAI+HA V SA A N+HRFF LY AP+M YLMD ++R R AL + AY P L + F++ ELGFE EAEC ++++ +E Sbjct: 110 KSNSIQPLYVDNAVEVQRREKRARRFDEDRKPTDHLPPIYEVAC---------TDVID-WDKDT--IVGRCQTLEKRYLRLTSAPDPETVRPLPILKKTLDLLKKKWRKESNYAYICDQFKSLRQDLTVQRIKNEFTVTVYELHARVALEKGDLGEYNQCQTQLVSLYE-HGLKGNQF-------------EFLAYRILYLLHTRNHADVNDILSKLTPVEK--SDPAILHALEVRSALATSNYHRFFSLYLNAPNMGGYLMDCFIVRERVNALCTMCKAYRP-YLTVRFIADELGFENEAECIQFLQERE 391
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_003406907.2 (leukocyte receptor cluster member 8 [Loxodonta africana]) HSP 1 Score: 180.6 bits (457), Expect = 1.200e-41 Identity = 108/242 (44.63%), Postives = 142/242 (58.68%), Query Frame = 0 Query: 174 LVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 +VGTC ++ K YLR DPSTVRP+SVL+++L VK+HW +DY +AC Q+KSIRQDL VQ I FTV VYETHARIALE GD EF +L + L+A + EF AYR+L+ ++ + I L A E+ P + HA A+ +A A GN+HRFF LY RAP MS YL+D R R+ AL ++ + P LP+ +L EL FE EA CR ++E Sbjct: 611 IVGTCPDITKHYLRLTCAPDPSTVRPVSVLKKSLAMVKSHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQL---KSLYAEN-----------LPGNVGEFTAYRILYYIFTKNSGDITTEL--AYLTRELKADPCVAHALALRAAWALGNYHRFFRLYCRAPCMSGYLVDKFADRERKAALKAMIKTFRP-VLPVSYLQAELAFEGEAACRAFLE 835
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_017325729.1 (PREDICTED: leukocyte receptor cluster member 8 [Ictalurus punctatus]) HSP 1 Score: 180.3 bits (456), Expect = 1.500e-41 Identity = 108/244 (44.26%), Postives = 143/244 (58.61%), Query Frame = 0 Query: 173 PLVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVEG 417 P+VGTC ++ K YLR DP+TVRP+ VLR++L VKAHW N+DYPYAC Q+KSIRQDL VQ I FTV VYETHARIALE GD EF +L + L+ PSS EF AYRLL+ ++ + I L+ E+ + HA A+ +A A GN+HRFF LY RAP M+AYL+D + R R+LAL +L + P ++P+ ++ L F C ++ G Sbjct: 584 PIVGTCQDITKIYLRLTCAPDPATVRPVPVLRKSLTAVKAHWKSNQDYPYACEQMKSIRQDLTVQGIRTDFTVEVYETHARIALEKGDHEEFNQCQTQL---KELYKECPSS-----------NVGEFTAYRLLYYIFTKNSGDITTELVYL--TPELRQDGCVAHALALRAAWALGNYHRFFLLYKRAPRMAAYLIDKFVERERKLALRAILKTFRP-SVPVEYVQSSLAFPCLDTCLTFLTG 810
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_007955132.1 (PREDICTED: leukocyte receptor cluster member 8 [Orycteropus afer afer]) HSP 1 Score: 179.9 bits (455), Expect = 2.000e-41 Identity = 108/242 (44.63%), Postives = 142/242 (58.68%), Query Frame = 0 Query: 174 LVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 +VGTC ++ K YLR DPSTVRP++VL+++L VK+HW +DY +AC QLKSIRQDL VQ I FTV VYETHARIALE GD EF +L + L+A + EF AYR+L+ ++ + I L A E+ P + HA A+ +A A GN+HRFF LY RAP MS YL+D R R+ AL ++ + P LP+ +L EL FE EA CR ++E Sbjct: 553 IVGTCPDITKHYLRLTCAPDPSTVRPVAVLQKSLAMVKSHWREKQDYAFACEQLKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQL---KSLYAEN-----------LPGNVGEFTAYRILYYIFTKNSGDITTEL--AYLTRELKADPCVAHALALRAAWALGNYHRFFRLYCRAPCMSGYLVDKFADRERKAALKAMIKTFRP-VLPVSYLQAELAFEGEAACRAFLE 777
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_004715697.1 (PREDICTED: leukocyte receptor cluster member 8 [Echinops telfairi]) HSP 1 Score: 179.5 bits (454), Expect = 2.600e-41 Identity = 107/242 (44.21%), Postives = 142/242 (58.68%), Query Frame = 0 Query: 174 LVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 +VGTC E+ K YLR DPSTVRP++VL+++L VK+HW +DY +AC Q+KSIRQDL VQ + FTV VYETHARIALE GD EF +L + L+A + EF AYR+L+ ++ + I L A E+ P + HA A+ +A A GN+HRFF LY RAP MS YL+D R R+ AL ++ + P LP+ +L EL FE EA CR ++E Sbjct: 545 IVGTCPEITKHYLRLTCTPDPSTVRPVAVLKKSLAMVKSHWKEKQDYAFACEQMKSIRQDLTVQGVRTEFTVEVYETHARIALEKGDHEEFNQCQTQL---KSLYAEN-----------LPGNVGEFTAYRILYYIFTKNSGDITTEL--AYLTRELKADPCVSHALALRAAWALGNYHRFFRLYCRAPCMSGYLVDKFADRERKAALKAMIKTFRP-VLPVSYLQAELAFEGEAACRAFLE 769
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_005341617.1 (leukocyte receptor cluster member 8 isoform X1 [Ictidomys tridecemlineatus]) HSP 1 Score: 179.5 bits (454), Expect = 2.600e-41 Identity = 108/242 (44.63%), Postives = 141/242 (58.26%), Query Frame = 0 Query: 174 LVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 +VGTC ++ K YLR DPSTVRP+SVL+++L VK+HW +DY +AC Q+KSIRQDL VQ I FTV VYETHARIALE GD EF +L + L+A + EF AYR+L+ ++ + I L A E+ P + HA A+ +A A GN+HRFF LY AP MS YL+D R RR AL ++ + P LP+ +L EL FE EA CR ++E Sbjct: 549 IVGTCPDITKHYLRLTCAPDPSTVRPVSVLKKSLCMVKSHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQL---KSLYAEN-----------LPGNVGEFTAYRILYYIFTKNSGDITTEL--AYLTRELKADPCVAHALALRAAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERRAALKAMIKTFRP-ALPVSYLQAELAFEGEAACRAFLE 773
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_012883205.1 (PREDICTED: leukocyte receptor cluster member 8 isoform X1 [Dipodomys ordii]) HSP 1 Score: 179.5 bits (454), Expect = 2.600e-41 Identity = 106/242 (43.80%), Postives = 142/242 (58.68%), Query Frame = 0 Query: 174 LVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 +VGTC+++ K YLR DPSTVRP+SVL+++L VK+HW +DY +AC Q+KSIRQDL VQ + FTV VYETHARIALE GD EF +L + L+A + EF AYR+L+ ++ + I L A E+ P + HA A+ +A A GN+HRFF LY AP MS YL+D R R+ AL ++ + P LP+ +L EL FE EA CR ++E Sbjct: 546 IVGTCLDITKHYLRLTCAPDPSTVRPVSVLKKSLCMVKSHWKEKQDYAFACEQMKSIRQDLTVQGVRTEFTVEVYETHARIALEKGDHEEFNQCQTQL---KSLYAEN-----------LPGNVGEFTAYRILYYMFTKNSGDITTEL--AYLTRELKADPCVAHALALRAAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKAALKAMIKTFRP-ALPVSYLQAELAFEGEAACRAFLE 770
BLAST of NO01G05620 vs. NCBI_GenBank
Match: XP_012883207.1 (PREDICTED: leukocyte receptor cluster member 8 isoform X2 [Dipodomys ordii]) HSP 1 Score: 179.5 bits (454), Expect = 2.600e-41 Identity = 106/242 (43.80%), Postives = 142/242 (58.68%), Query Frame = 0 Query: 174 LVGTCMEVEKEYLRSMEEVDPSTVRPLSVLREALHRVKAHWTINEDYPYACSQLKSIRQDLRVQHIEDAFTVHVYETHARIALEAGDLGEFLVAAARLDDIRRLHASSPSSFXXXXXXXXXXXXXEFLAYRLLHALYLAHPAQIRLLLLQAREEEEIWCHPAIVHARAVVSADAQGNFHRFFHLYTRAPHMSAYLMDFLLLRMRRLALSRVLVAYGPETLPLLFLSQELGFETEAECREYVE 416 +VGTC+++ K YLR DPSTVRP+SVL+++L VK+HW +DY +AC Q+KSIRQDL VQ + FTV VYETHARIALE GD EF +L + L+A + EF AYR+L+ ++ + I L A E+ P + HA A+ +A A GN+HRFF LY AP MS YL+D R R+ AL ++ + P LP+ +L EL FE EA CR ++E Sbjct: 545 IVGTCLDITKHYLRLTCAPDPSTVRPVSVLKKSLCMVKSHWKEKQDYAFACEQMKSIRQDLTVQGVRTEFTVEVYETHARIALEKGDHEEFNQCQTQL---KSLYAEN-----------LPGNVGEFTAYRILYYMFTKNSGDITTEL--AYLTRELKADPCVAHALALRAAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKAALKAMIKTFRP-ALPVSYLQAELAFEGEAACRAFLE 769 The following BLAST results are available for this feature:
BLAST of NO01G05620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05620 ID=NO01G05620|Name=NO01G05620|organism=Nannochloropsis oceanica|type=gene|length=2868bpback to top protein sequence of NO01G05620.2 >NO01G05620.2-protein ID=NO01G05620.2-protein|Name=NO01G05620.2|organism=Nannochloropsis oceanica|type=polypeptide|length=528bpback to top protein sequence of NO01G05620.1 >NO01G05620.1-protein ID=NO01G05620.1-protein|Name=NO01G05620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=497bpback to top Synonyms
Publications
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