NO01G05520, NO01G05520 (gene) Nannochloropsis oceanica

Overview
NameNO01G05520
Unique NameNO01G05520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3457
Alignment locationchr1:1514728..1518709 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein of unknown function (DUF1350)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1514728..1518709 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR010765DUF1350
Homology
BLAST of NO01G05520 vs. NCBI_GenBank
Match: EWM22766.1 (Protein of unknown function DUF1350 [Nannochloropsis gaditana])

HSP 1 Score: 445.3 bits (1144), Expect = 2.400e-121
Identity = 260/440 (59.09%), Postives = 303/440 (68.86%), Query Frame = 0
Query:   24 RTLLIGALL----PSALAWGRGAGGGAYGGTSSSSLYMAGRDTCFSHSLFLNPSSH---QFVGTSSTAGRGIPRQRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRLAVTVEVVTDDDLSS--SLR-RGRGREGRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPP----PSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQRGREGGRG 450
            R LL  +LL    P   AWG+       G T  +SL M+ RD CFSH+L L P +     F  + ST  R                                       TRL    +V  +DDLSS  SLR + R + G Q  GGEW++VD+ V+V FPEA A PKG++HFVGGAVVGAFPRAAYGPLLERL RQGYC+IAT+LPFSLFDHAAGAR LA+AYARGE YVEGVYGPR+RQQLPVFGLGHSLGAKM +LLGS PP            P    RRANVLVAFNNFSA++SVPLL+E+R LG S+ GM LS KLED+SR+++SL+AL+LSGASSPN++RET SGFDLASKGL MAM FLSSLPT    DFTPSP+ETWALLSSPP     S P+SSP Y+V +NLVVSFDKDTIDQS  L++LL++RGREGGRG
Sbjct:    4 RGLLCVSLLLSTSPYVQAWGQSGSRSDGGRTMDASLAMSSRDICFSHALVLRPHARVPSPFSESPSTMAR--------------FRTCMSSSSSTSSAAWPPSRFRASTTRLTARAQVFDEDDLSSAPSLRTQPRTKPGTQ--GGEWQRVDEGVDVFFPEASAPPKGLVHFVGGAVVGAFPRAAYGPLLERLGRQGYCVIATALPFSLFDHAAGARALAMAYARGEAYVEGVYGPRVRQQLPVFGLGHSLGAKMLILLGSPPP--SLPSFSSSSAPTAGPRRANVLVAFNNFSAKQSVPLLEELRELGQSVAGMDLSGKLEDISRMVSSLAALNLSGASSPNAQRETTSGFDLASKGLTMAMDFLSSLPTSGVPDFTPSPEETWALLSSPPLFPSSSLPSSSPSYAVLNNLVVSFDKDTIDQSEELVALLRERGREGGRG 425          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: CBJ25447.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 178.7 bits (452), Expect = 4.100e-41
Identity = 110/297 (37.04%), Postives = 163/297 (54.88%), Query Frame = 0
Query:  152 GRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMG-LSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR-GREG 447
            G    G +W ++ +  +VL P     P G++HFVGG  VG FPR AYG LLE L   G+ ++AT +  + F+H   A  +A  +      VE +YG    +++P+FG+GHSLGAK+HVLL   P                 +R+ANV+++FNNF A++SVP ++E+R LGLS+   G L   L  +++ ++ L          P      + G  LA +    A S + S+ +D+P +F PSP+ TW LL+            YSV +NLV+ F +DTIDQSP+L  +L  R GR+G
Sbjct:  112 GASRSGRDWEEIGN-ADVLVPRDVDYPLGVVHFVGGQGVGVFPRNAYGALLEGLVDAGFLVVATRVRLNEFNHDQLACDVARDFRVAYRDVEALYGRTAMRRIPLFGVGHSLGAKVHVLLNCYP----------EVVDVARRRKANVIISFNNFPAKDSVPFINELRELGLSMENFGPLGDNLSGIAKAVSGL----------PLVNGFASQGLSLAEEWGPKAASAVGSMLSDVPQEFKPSPEATWDLLTDR----------YSVRNNLVLQFKRDTIDQSPQLAEVLFNRFGRDG 377          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: CEL99856.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 128.6 bits (322), Expect = 4.900e-26
Identity = 87/266 (32.71%), Postives = 129/266 (48.50%), Query Frame = 0
Query:  178 PKGIIHFVGGAVVGAFPRAAYGPLLERLAR-QGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPT---DIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLL 440
            P  +IHF+GG +VG+ PRAAYGPLLE L R  G  I+AT LP + FDH       ++ ++       G+        +P+ G+GHSLG+K+ +LLG+ P                    +N+ +AFNN+ A +S+P   ++R+ G  +GG+G      DV   +       L  +      R   S       G   A + +S+LP+   ++P +FTP P  TW +L S           Y V  N V+ F +D ID+S RL  LL
Sbjct:  104 PTAVIHFIGGTLVGSAPRAAYGPLLEGLCRLTGAVIVATPLPLATFDHLRACVEASLQFSETVREDLGM----TESSVPIIGIGHSLGSKVLMLLGALPADSKERLSLITP-------SSNIFLAFNNYGASQSIPFYSQLRSAGQQLGGLG---PYGDVLGELLGGGLQSLDDSYGGRLGRLGRSFLREMGVGGPQADNMISNLPSALANLPEEFTPDPASTWRILESS----------YGVERNAVIKFTRDGIDESDRLAGLL 345          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: OKY73533.1 (hypothetical protein BJG00_00090 [Limnothrix sp. CACIAM 69d])

HSP 1 Score: 127.5 bits (319), Expect = 1.100e-25
Identity = 96/284 (33.80%), Postives = 137/284 (48.24%), Query Frame = 0
Query:  159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443
            +WR++D    VL P   A P G+IHF+GGA VGA P+  Y  LLERLA +GY  IAT    S FDH A A    + + R  +++   +G   R+ +PV+GLGHS+G K+H+L+GS                +  +R  N L+AFNN+SAQ ++PL D                 LE ++R +      D+               FD   K LN              ++FTPSP ET  L+++           Y +  NL++ F  D +DQS RL  +LQ+R
Sbjct:    7 QWRELDG-AWVLIP---ANPLGVIHFLGGAFVGAAPQFTYRWLLERLANRGYGTIATPFVNSGFDHEAIAEDTLIRFDRAIDWLYR-HGQLRRRSIPVYGLGHSMGCKLHLLIGSI---------------FEVERAGNALMAFNNYSAQRAIPLFDR------------FGPVLESINRAMPGAVPADV---------------FD---KRLN--------------AEFTPSPAETERLIAAQ----------YGIRRNLLIRFGTDDLDQSARLAPILQRR 216          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: WP_099534423.1 (DUF1350 domain-containing protein [Limnothrix sp. PR1529] >OCQ92058.1 hypothetical protein BCR12_02280 [Limnothrix sp. P13C2] >PIB07079.1 hypothetical protein AMR42_14560 [Limnothrix sp. PR1529])

HSP 1 Score: 126.3 bits (316), Expect = 2.400e-25
Identity = 95/284 (33.45%), Postives = 137/284 (48.24%), Query Frame = 0
Query:  159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443
            +WR+++    VL P   A P G+IHF+GGA VGA P+  Y  LLERLA +GY  IAT    S FDH A A    + + R  +++   +G   R+ +PV+GLGHS+G K+H+L+GS                +  +R  N L+AFNN+SAQ ++PL D                 LE ++R +      D+               FD   K LN              ++FTPSP ET  L+++           Y +  NL++ F  D +DQS RL  +LQ+R
Sbjct:    7 QWRELNG-AWVLIP---ANPLGVIHFLGGAFVGAAPQFTYRWLLERLANRGYGTIATPFVNSGFDHEAIAEDALIRFDRAIDWLYR-HGQLRRRSIPVYGLGHSMGCKLHLLIGSI---------------FEVERAGNALMAFNNYSAQRAIPLFDR------------FGPVLESINRAVPGAVPADV---------------FD---KRLN--------------AEFTPSPTETEQLIAAQ----------YGIRRNLLIRFATDDLDQSSRLAPILQRR 216          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: PSC76402.1 (plant MCA23-20 [Micractinium conductrix])

HSP 1 Score: 119.8 bits (299), Expect = 2.300e-23
Identity = 97/297 (32.66%), Postives = 148/297 (49.83%), Query Frame = 0
Query:  152 GRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLD-----EMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPS---DFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQ 441
            G    GG WR+V D   VL+P   A P+ ++HF+GG+ VGA P+ AYGPLLE LA +G  ++A     S FDH    R+    + + E  ++ + GP+   QLP +G+GHSLGA +H L+GS  P                    NVL+++NN  A +S+PLL       +R LG  +  +  S     V + I      DL   +SP+             K +   +  L+ +  DI +   +FTP+P+E+ +++             Y+VP NL++ F  D ID++P+L S LQ
Sbjct:   96 GAGGPGGNWREVAD-CFVLYPPEGAAPRCLVHFIGGSFVGAAPQLAYGPLLEALAARGTLVVAVPYATS-FDH---MRVADEVHFKFERCLKAL-GPQ-AIQLPRYGVGHSLGALLHCLIGSRYPIV---------------SAGNVLMSYNNRPATDSIPLLSPLIAPNIRALGPILSQLATSPLRSGVEQWI------DLLRGASPS-----------IVKQIIPLLDQLTPIYLDIANGTQEFTPAPEESRSIIRQG----------YTVPRNLLLRFSADEIDETPQLASTLQ 343          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: XP_005712181.1 (unnamed protein product [Chondrus crispus] >CDF32516.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23
Identity = 87/275 (31.64%), Postives = 136/275 (49.45%), Query Frame = 0
Query:  168 EVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443
            +V+   +  +P  ++ F GG   G  PRA YG  LE +AR+G   I  +     FDH A   L A A  +  +    + G      +P FG+GHSLGAK+ +L                         AN+ +AFNN++A++S+P+ D +++   +IG    +  ++++S++   L +LDLSG +   S    N   D+  K  +   SF SS  TD   +FTP+PDET  L+ S           Y+VP NL++SF +DT+ Q+  L  +L  R
Sbjct:   89 QVVTVPSATRPVAVVRFTGGFAAGIAPRALYGRFLEEIARRGNVAIVAAPVNPSFDHLA---LAADASEKLGDATRELVGRWDVPWIPTFGMGHSLGAKVQLLANCDEDARQALGPTV----------ANLFLAFNNYTAKQSIPMWDAIQS---AIGEESTAKSIKELSKVADFLRSLDLSGLADSRSADSVNQASDVLKKVGDTMKSFASS-TTD---EFTPTPDETLQLVRSR----------YNVPENLLISFSRDTLSQNEALEDVLCTR 333          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: WP_026720015.1 (DUF1350 domain-containing protein [Fischerella sp. PCC 9431])

HSP 1 Score: 114.4 bits (285), Expect = 9.500e-22
Identity = 88/287 (30.66%), Postives = 134/287 (46.69%), Query Frame = 0
Query:  159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPF-SLFDHAAGARLLAVAYARGENYVEG--VYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443
            EW+++     ++ P    +P GI+HF+GGA V   P   Y  LLE +A +G+ IIAT  PF +  DH A A L  + + R    +E   + G   ++ LPV+GLGHS+G K+H+L+GS                ++ +R  N+L++FNN++A++++PL++++                                           NS F   +   N+A+            +FTPSP ET  L+             YS+  NL+V FD DTIDQS  L  LLQQR
Sbjct:    2 EWKEISGNWVLIPP----KPTGIVHFLGGAFVATAPHITYRLLLENIADKGFVIIAT--PFVNTLDHTAIAELALLNFERTLLRLEDREMLG---KKYLPVYGLGHSMGCKLHLLIGSL---------------FQVERAGNILISFNNYAARDAIPLIEQL-------------------------------------------NSTFSTFNFNPNLAV------------EFTPSPLETQQLIQEN----------YSIRRNLLVKFDNDTIDQSAPLAKLLQQR 199          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: WP_088892633.1 (DUF1350 domain-containing protein [Leptolyngbya ohadii])

HSP 1 Score: 113.6 bits (283), Expect = 1.600e-21
Identity = 84/284 (29.58%), Postives = 129/284 (45.42%), Query Frame = 0
Query:  159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443
            EW+++     ++ P    QP  IIHF+GGA V   P+  Y  LLE LA QGY I+AT    +L       R L +    G   +E +    ++++LPV+G+GHS+G K+H+L+GS                Y  +R  N+L++FNN+ A+ S+P+L++   L   +G   ++     +S     LS   L             + FD+                     +FTPSP+ET  L++            Y V  NL+V F+ D IDQ+  L   L  R
Sbjct:    2 EWQELYGNWVLIPP----QPIAIIHFLGGAFVATAPQLTYRTLLEFLANQGYAIVATPFVNTLDHTTIAQRTLRI----GNLGIEHLQTDILQEELPVYGMGHSMGCKVHLLIGSL---------------YPQERAGNILISFNNYPARRSIPMLEQFSELS-KVGSQWITQFTNQLSTQFKDLSLPQL-------------ANFDV---------------------EFTPSPEETNRLIAE----------HYQVKRNLLVKFNSDDIDQTKPLTLALNDR 217          
BLAST of NO01G05520 vs. NCBI_GenBank
Match: XP_020673941.1 (uncharacterized protein LOC110093403 [Dendrobium catenatum] >PKU71804.1 hypothetical protein MA16_Dca008333 [Dendrobium catenatum])

HSP 1 Score: 113.2 bits (282), Expect = 2.100e-21
Identity = 89/286 (31.12%), Postives = 137/286 (47.90%), Query Frame = 0
Query:  158 GEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPF-SLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPS---DFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLL 440
            G+W++++    VL P    +P+ I+HF+GG  VGA P+  Y   LERL+ +G  +IAT  PF S FDH + A  + + Y R    +       I   LP FG+GHSLG+ +H+L+GS                Y  +R  NVL+AFNN  A  ++PL   +           +    + +  L+T L++       +  + R+  S      K +   +  LS L  D+ +   DF P P+ET  L+ S          +Y +  NL++ F  DTID++P L  LL
Sbjct:   98 GDWKEIEG-TWVLRPR-HTRPRSIVHFIGGIFVGATPQLTYRLFLERLSDKGVLVIAT--PFASRFDHFSIADEVQLKYDRSMRSLTD-----IENDLPTFGIGHSLGSVIHLLIGSR---------------YAVQRNGNVLLAFNNKEASLAIPLFSPV-----------IVPMAQSLGPLLTQLTSSPSIRRGAEIAMRQLESLSPPILKQVLPLVEQLSPLYMDLVNGREDFIPKPEETSRLIKS----------YYGISRNLLIQFKDDTIDETPTLAKLL 338          
The following BLAST results are available for this feature:
BLAST of NO01G05520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22766.12.400e-12159.09Protein of unknown function DUF1350 [Nannochlorops... [more]
CBJ25447.14.100e-4137.04conserved unknown protein [Ectocarpus siliculosus][more]
CEL99856.14.900e-2632.71unnamed protein product [Vitrella brassicaformis C... [more]
OKY73533.11.100e-2533.80hypothetical protein BJG00_00090 [Limnothrix sp. C... [more]
WP_099534423.12.400e-2533.45DUF1350 domain-containing protein [Limnothrix sp. ... [more]
PSC76402.12.300e-2332.66plant MCA23-20 [Micractinium conductrix][more]
XP_005712181.13.000e-2331.64unnamed protein product [Chondrus crispus] >CDF325... [more]
WP_026720015.19.500e-2230.66DUF1350 domain-containing protein [Fischerella sp.... [more]
WP_088892633.11.600e-2129.58DUF1350 domain-containing protein [Leptolyngbya oh... [more]
XP_020673941.12.100e-2131.12uncharacterized protein LOC110093403 [Dendrobium c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|245896gene_580Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100554g4gene7679Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05520.1NO01G05520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05520.2NO01G05520.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05520.3NO01G05520.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05520.4NO01G05520.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05520.1NO01G05520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05520.2NO01G05520.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05520.3NO01G05520.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05520.4NO01G05520.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05520 ID=NO01G05520|Name=NO01G05520|organism=Nannochloropsis oceanica|type=gene|length=3457bp
TGCAAAAAATCCCCTTACACCCTCCACTCAATTCGTATTCCCACCTTATC
TCATTTTTACATTTTTTTCTCTTTTTATCGCCTCTTTCTTTCCAAAACCT
TCACCCGGCCAGCGGGCCGCGGTATTCCCCGACAGCGGTCCACAACCATG
ATGCGCATGCGCACCAATACCCCGACCTCCTCCTCCTCCTCCTCTCCTTT
CCTTCCTTCCTCCATCTCTGCCTTCCGTCCTTCCTCCACCCGCCTCGCCG
TCACGGTCGAAGTCGTCACAGACGACGATTTGTCCTCCTCCCTGCGTCGT
GGGAGGGGGAGGGAAGGAAGGCAGGCAGGAGGGGGGGAATGGAGAAAAGT
TGACGATGAGGTGGAAGTATTATTTCCTGAGGCCTTTGCTCAACCGAAGG
GCATCATTCACTTCGTGGGAGGGGCAGTGGTGGGCGCCTTTCCCCGAGCG
GCATATGGGCCCTTGTTGGAGCGGTTAGCGAGGCAGgtagggaaggaggc
gaggaagggaaggagggagggaaggagggaggtaaggatcgagtgcacag
gcttattcctattaatcatgctttgctctggctcgtatttctatgatgga
gatgccacgaatgaggcttgaggctcaccgtcccccctccctcgctccct
tcctccctccctccctattccgattagGGGTACTGTATCATCGCCACATC
CCTCCCCTTCTCCCTCTTCGACCACGCGGCGGGCGCGCGTTTGCTGGCAG
TGGCCTACGCGCGAGGAGAGAATTATGTCGAGGGGGTGTACGGGCCTCGG
ATTCGGCAGCAGgtgagggagggagagagggagggagggagggatgtcgc
ctcagatgccaatcttatggagctgttacgctccctccgcatttgtcccc
cctctcttcaccttttcctctctccctcattccctccccctcctattcct
gcagCTCCCCGTCTTCGGCCTCGGCCACTCCCTTGGCGCCAAAATGCACG
TCCTCCTCGGGTCCTCCCCTCCCTCCCTCCCTCCCTCCTCCTCCTCCTCC
TCCCCCTCCCCCTACCGCAGCAAGCGTCGGGCGAATGTGTTGGTGGCTTT
TAACAATTTTTCGGCTCAGGAATCAGTGCCCCTGCTGGACGAGATGAGGA
ACCTGGGTTTATCTATAGGGGGCATGGGCCTAAGCAGCAAGgtagggcgg
gagggagggagggagggagggagggagggagggaaagagaaatatgaagt
aggacctaaaggcaggaatgaattgtaccccccccccccttttggctact
ctggcgcgtcctcttccaacacacagccttttacccttctgctgatcccg
ccctccctcccgccctcccttcctccctcccccggcccctcccttccttg
tagCTGGAAGACGTTTCGCGCCTCATAACTTCCCTCTCCGCATTGGATCT
ATCCGGGGCCTCCTCGCCCAATTCGCGAAGAGAAACTAATAGCGGTTTCG
ACCTCGCATCGAAAGgtgagagagagtagagggcgagagggagggaggga
gggaggaagagagggagggaggaaaggaaatatcaccgtcatcttgggat
tcagctgctgttttttttaaaccacacacatgaatatacataactgacct
ctgggttgaaaaaaagggaagctccaggctagccaaatcacctttcatgt
cgttgctcaaccccccaccaaccctccctccctcctttcctccctccccc
ccaccctcccccaccagGCCTCAATATGGCTATGAGCTTCCTCTCCTCCC
TCCCAACCGATATCCCCTCCGACTTCACCCCCTCGCCCGACGAAACATGG
GCCCTCCTCTCCTCTCCCCCTCCCTCGGCCCCTGCCTCCTCCCCCTTCTA
CAGCGTGCCCTCCAACCTCGTCGTCTCCTTCGACAAGGACACAATCGATC
AGTCTCCCCGACTCCTCTCTCTCCTTCAGCAGCGAGGGAGGGAAGGAGGA
AGGGGGGAGGAAGGGTGGAGAGTGTCAGGCTGGCAGGAACGCACTTGACG
CCCAACACACCGCAGGGCGTGTTGGACGCCGAGGTTGAGGGCCGGGGGGA
GGGAGGGCAGGTGCAGGATGCCTACGGTAGAAAATGGGTGGAGGAAGGGG
GGGCGGGAGAAGCCGTAGAAGGAGCTGGAGGAGGAGAAGGAGCAATAGGA
GGAGCAGCGGCGCAGGCAGTGGCACGAACGGCGAAGCGGGAGTTGGATGC
gtaggtcactcgagagggaggaaaggagggagggagggagggagggaggg
gggacaggagggagggagggagggctgggagagaaaaatataaaatattc
atgttcatcacctttttctcaaaataatcctttccaatatatatatatat
atagGCTGGCAGCTGCTATTACAACCTTCCTGGACTCGGAGTTGGTGGTC
GGCAGCCTGGGGCCAGGCGGTGACATGTCCTAGTAACGGAATGAAACGGA
AGAAGAGTGCAACGGAAAGGAGAGGACGGGAAGGAGCAACCGACGTGAAT
GTGTGGATAGATAGGGACAATGAATGACAAGAAAATAAAATGTCACCATT
TCGCTGGCTGGTGACGCAGCTGCGTGCTGCTGGAAGCTTACCCCATGGTA
TCTGCTTCTCTTCCTTCTTCGTTGATATATGGCTTATCGAGGAAATTTAT
TCTTCTGTCTCATGAAATCAATCGCAATCTTTATCTCTTGGATGTCTCTA
CGAAGAATCATGCCCAAGCCCCTCCTTTCCCCTCTCTATTCCCCTCCTTC
CCCGCCCTTGCCTTTCTTTCTTTGACCCGGGTCAGAGTGACTGCATATAT
ATATATGTATATATGTATATTTATATTTATATATGTATTTATGTATACAC
ACCAAGTACACCTACACATACAAACACTGCCTACGTCTCTATAACCTGGG
AAATACCTTCCCCATCCAAGCTCTGGCTGCGTGAATGCTGCTGCTGCTGT
GGCTGCTGCGGCTGCTGTGGCTGCTGCGGCTGCTGTGGCTGCTGTGGCTG
CGGCTGCCCCACTAGCCCTCCAGGCTGCAACGTGTCGGCCTCGCCACCTA
CCCGTCTCGGTCGCCTCCTCAACATATATCTTGTGGGAGCAACGGCACTT
CCGTCGCCCCAAGCGACAGACCAGAGCGCTACAGCGACGGGTGAGCTATC
CCTCTCTCTCCCCTTCCTCATCCACATCCTCCGCTTTTCTCCTCTCCCTT
CCTCCTAGTTGGCGAGGAGGGCGGGACAACGCGATTTACCTTCTCAAAAT
GCAGGCGTCCAAGCAAATTATTAATAAGCGAGTAATTCACATCGGCATCG
TCCAAAGCATACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTCCTG
CACCAAGGGCTGCATAGACACACCTCCCTCTTCTGCTGCTGCTGCTGCTG
CTGCTGC
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protein sequence of NO01G05520.1

>NO01G05520.1-protein ID=NO01G05520.1-protein|Name=NO01G05520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MTSTESQRQGSTSRLHAVSYRSFRTLLIGALLPSALAWGRGAGGGAYGGT
SSSSLYMAGRDTCFSHSLFLNPSSHQFVGTSSTAGRGIPRQRSTTMMRMR
TNTPTSSSSSSPFLPSSISAFRPSSTRLAVTVEVVTDDDLSSSLRRGRGR
EGRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGP
LLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRI
RQQLPVFGLGHSLGAKMHVLLGSSPPSLPPSSSSSSPSPYRSKRRANVLV
AFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSG
ASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALL
SSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQRGREGGRGE
EGWRVSGWQERT*
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protein sequence of NO01G05520.2

>NO01G05520.2-protein ID=NO01G05520.2-protein|Name=NO01G05520.2|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MCRVSYVLLHPTPSSTSPTRNTGALLPSALAWGRGAGGGAYGGTSSSSLY
MAGRDTCFSHSLFLNPSSHQFVGTSSTAGRGIPRQRSTTMMRMRTNTPTS
SSSSSPFLPSSISAFRPSSTRLAVTVEVVTDDDLSSSLRRGRGREGRQAG
GGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLA
RQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPV
FGLGHSLGAKMHVLLGSSPPSLPPSSSSSSPSPYRSKRRANVLVAFNNFS
AQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNS
RRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPS
APASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQRGREGGRGEEGWRVS
GWQERT*
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protein sequence of NO01G05520.3

>NO01G05520.3-protein ID=NO01G05520.3-protein|Name=NO01G05520.3|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MMRMRTNTPTSSSSSSPFLPSSISAFRPSSTRLAVTVEVVTDDDLSSSLR
RGRGREGRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPR
AAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGV
YGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPSLPPSSSSSSPSPYRSKRR
ANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSA
LDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDE
TWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQRGRE
GGRGEEGWRVSGWQERT*
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protein sequence of NO01G05520.4

>NO01G05520.4-protein ID=NO01G05520.4-protein|Name=NO01G05520.4|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MMRMRTNTPTSSSSSSPFLPSSISAFRPSSTRLAVTVEVVTDDDLSSSLR
RGRGREGRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPR
AAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGV
YGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPSLPPSSSSSSPSPYRSKRR
ANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSA
LDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDE
TWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQRGRE
GGRGEEGWRVSGWQERT*
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