NO01G05520, NO01G05520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05520 vs. NCBI_GenBank
Match: EWM22766.1 (Protein of unknown function DUF1350 [Nannochloropsis gaditana]) HSP 1 Score: 445.3 bits (1144), Expect = 2.400e-121 Identity = 260/440 (59.09%), Postives = 303/440 (68.86%), Query Frame = 0 Query: 24 RTLLIGALL----PSALAWGRGAGGGAYGGTSSSSLYMAGRDTCFSHSLFLNPSSH---QFVGTSSTAGRGIPRQRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRLAVTVEVVTDDDLSS--SLR-RGRGREGRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPP----PSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQRGREGGRG 450 R LL +LL P AWG+ G T +SL M+ RD CFSH+L L P + F + ST R TRL +V +DDLSS SLR + R + G Q GGEW++VD+ V+V FPEA A PKG++HFVGGAVVGAFPRAAYGPLLERL RQGYC+IAT+LPFSLFDHAAGAR LA+AYARGE YVEGVYGPR+RQQLPVFGLGHSLGAKM +LLGS PP P RRANVLVAFNNFSA++SVPLL+E+R LG S+ GM LS KLED+SR+++SL+AL+LSGASSPN++RET SGFDLASKGL MAM FLSSLPT DFTPSP+ETWALLSSPP S P+SSP Y+V +NLVVSFDKDTIDQS L++LL++RGREGGRG Sbjct: 4 RGLLCVSLLLSTSPYVQAWGQSGSRSDGGRTMDASLAMSSRDICFSHALVLRPHARVPSPFSESPSTMAR--------------FRTCMSSSSSTSSAAWPPSRFRASTTRLTARAQVFDEDDLSSAPSLRTQPRTKPGTQ--GGEWQRVDEGVDVFFPEASAPPKGLVHFVGGAVVGAFPRAAYGPLLERLGRQGYCVIATALPFSLFDHAAGARALAMAYARGEAYVEGVYGPRVRQQLPVFGLGHSLGAKMLILLGSPPP--SLPSFSSSSAPTAGPRRANVLVAFNNFSAKQSVPLLEELRELGQSVAGMDLSGKLEDISRMVSSLAALNLSGASSPNAQRETTSGFDLASKGLTMAMDFLSSLPTSGVPDFTPSPEETWALLSSPPLFPSSSLPSSSPSYAVLNNLVVSFDKDTIDQSEELVALLRERGREGGRG 425
BLAST of NO01G05520 vs. NCBI_GenBank
Match: CBJ25447.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 178.7 bits (452), Expect = 4.100e-41 Identity = 110/297 (37.04%), Postives = 163/297 (54.88%), Query Frame = 0 Query: 152 GRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMG-LSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR-GREG 447 G G +W ++ + +VL P P G++HFVGG VG FPR AYG LLE L G+ ++AT + + F+H A +A + VE +YG +++P+FG+GHSLGAK+HVLL P +R+ANV+++FNNF A++SVP ++E+R LGLS+ G L L +++ ++ L P + G LA + A S + S+ +D+P +F PSP+ TW LL+ YSV +NLV+ F +DTIDQSP+L +L R GR+G Sbjct: 112 GASRSGRDWEEIGN-ADVLVPRDVDYPLGVVHFVGGQGVGVFPRNAYGALLEGLVDAGFLVVATRVRLNEFNHDQLACDVARDFRVAYRDVEALYGRTAMRRIPLFGVGHSLGAKVHVLLNCYP----------EVVDVARRRKANVIISFNNFPAKDSVPFINELRELGLSMENFGPLGDNLSGIAKAVSGL----------PLVNGFASQGLSLAEEWGPKAASAVGSMLSDVPQEFKPSPEATWDLLTDR----------YSVRNNLVLQFKRDTIDQSPQLAEVLFNRFGRDG 377
BLAST of NO01G05520 vs. NCBI_GenBank
Match: CEL99856.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 128.6 bits (322), Expect = 4.900e-26 Identity = 87/266 (32.71%), Postives = 129/266 (48.50%), Query Frame = 0 Query: 178 PKGIIHFVGGAVVGAFPRAAYGPLLERLAR-QGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPT---DIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLL 440 P +IHF+GG +VG+ PRAAYGPLLE L R G I+AT LP + FDH ++ ++ G+ +P+ G+GHSLG+K+ +LLG+ P +N+ +AFNN+ A +S+P ++R+ G +GG+G DV + L + R S G A + +S+LP+ ++P +FTP P TW +L S Y V N V+ F +D ID+S RL LL Sbjct: 104 PTAVIHFIGGTLVGSAPRAAYGPLLEGLCRLTGAVIVATPLPLATFDHLRACVEASLQFSETVREDLGM----TESSVPIIGIGHSLGSKVLMLLGALPADSKERLSLITP-------SSNIFLAFNNYGASQSIPFYSQLRSAGQQLGGLG---PYGDVLGELLGGGLQSLDDSYGGRLGRLGRSFLREMGVGGPQADNMISNLPSALANLPEEFTPDPASTWRILESS----------YGVERNAVIKFTRDGIDESDRLAGLL 345
BLAST of NO01G05520 vs. NCBI_GenBank
Match: OKY73533.1 (hypothetical protein BJG00_00090 [Limnothrix sp. CACIAM 69d]) HSP 1 Score: 127.5 bits (319), Expect = 1.100e-25 Identity = 96/284 (33.80%), Postives = 137/284 (48.24%), Query Frame = 0 Query: 159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443 +WR++D VL P A P G+IHF+GGA VGA P+ Y LLERLA +GY IAT S FDH A A + + R +++ +G R+ +PV+GLGHS+G K+H+L+GS + +R N L+AFNN+SAQ ++PL D LE ++R + D+ FD K LN ++FTPSP ET L+++ Y + NL++ F D +DQS RL +LQ+R Sbjct: 7 QWRELDG-AWVLIP---ANPLGVIHFLGGAFVGAAPQFTYRWLLERLANRGYGTIATPFVNSGFDHEAIAEDTLIRFDRAIDWLYR-HGQLRRRSIPVYGLGHSMGCKLHLLIGSI---------------FEVERAGNALMAFNNYSAQRAIPLFDR------------FGPVLESINRAMPGAVPADV---------------FD---KRLN--------------AEFTPSPAETERLIAAQ----------YGIRRNLLIRFGTDDLDQSARLAPILQRR 216
BLAST of NO01G05520 vs. NCBI_GenBank
Match: WP_099534423.1 (DUF1350 domain-containing protein [Limnothrix sp. PR1529] >OCQ92058.1 hypothetical protein BCR12_02280 [Limnothrix sp. P13C2] >PIB07079.1 hypothetical protein AMR42_14560 [Limnothrix sp. PR1529]) HSP 1 Score: 126.3 bits (316), Expect = 2.400e-25 Identity = 95/284 (33.45%), Postives = 137/284 (48.24%), Query Frame = 0 Query: 159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443 +WR+++ VL P A P G+IHF+GGA VGA P+ Y LLERLA +GY IAT S FDH A A + + R +++ +G R+ +PV+GLGHS+G K+H+L+GS + +R N L+AFNN+SAQ ++PL D LE ++R + D+ FD K LN ++FTPSP ET L+++ Y + NL++ F D +DQS RL +LQ+R Sbjct: 7 QWRELNG-AWVLIP---ANPLGVIHFLGGAFVGAAPQFTYRWLLERLANRGYGTIATPFVNSGFDHEAIAEDALIRFDRAIDWLYR-HGQLRRRSIPVYGLGHSMGCKLHLLIGSI---------------FEVERAGNALMAFNNYSAQRAIPLFDR------------FGPVLESINRAVPGAVPADV---------------FD---KRLN--------------AEFTPSPTETEQLIAAQ----------YGIRRNLLIRFATDDLDQSSRLAPILQRR 216
BLAST of NO01G05520 vs. NCBI_GenBank
Match: PSC76402.1 (plant MCA23-20 [Micractinium conductrix]) HSP 1 Score: 119.8 bits (299), Expect = 2.300e-23 Identity = 97/297 (32.66%), Postives = 148/297 (49.83%), Query Frame = 0 Query: 152 GRQAGGGEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLD-----EMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPS---DFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQ 441 G GG WR+V D VL+P A P+ ++HF+GG+ VGA P+ AYGPLLE LA +G ++A S FDH R+ + + E ++ + GP+ QLP +G+GHSLGA +H L+GS P NVL+++NN A +S+PLL +R LG + + S V + I DL +SP+ K + + L+ + DI + +FTP+P+E+ +++ Y+VP NL++ F D ID++P+L S LQ Sbjct: 96 GAGGPGGNWREVAD-CFVLYPPEGAAPRCLVHFIGGSFVGAAPQLAYGPLLEALAARGTLVVAVPYATS-FDH---MRVADEVHFKFERCLKAL-GPQ-AIQLPRYGVGHSLGALLHCLIGSRYPIV---------------SAGNVLMSYNNRPATDSIPLLSPLIAPNIRALGPILSQLATSPLRSGVEQWI------DLLRGASPS-----------IVKQIIPLLDQLTPIYLDIANGTQEFTPAPEESRSIIRQG----------YTVPRNLLLRFSADEIDETPQLASTLQ 343
BLAST of NO01G05520 vs. NCBI_GenBank
Match: XP_005712181.1 (unnamed protein product [Chondrus crispus] >CDF32516.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23 Identity = 87/275 (31.64%), Postives = 136/275 (49.45%), Query Frame = 0 Query: 168 EVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443 +V+ + +P ++ F GG G PRA YG LE +AR+G I + FDH A L A A + + + G +P FG+GHSLGAK+ +L AN+ +AFNN++A++S+P+ D +++ +IG + ++++S++ L +LDLSG + S N D+ K + SF SS TD +FTP+PDET L+ S Y+VP NL++SF +DT+ Q+ L +L R Sbjct: 89 QVVTVPSATRPVAVVRFTGGFAAGIAPRALYGRFLEEIARRGNVAIVAAPVNPSFDHLA---LAADASEKLGDATRELVGRWDVPWIPTFGMGHSLGAKVQLLANCDEDARQALGPTV----------ANLFLAFNNYTAKQSIPMWDAIQS---AIGEESTAKSIKELSKVADFLRSLDLSGLADSRSADSVNQASDVLKKVGDTMKSFASS-TTD---EFTPTPDETLQLVRSR----------YNVPENLLISFSRDTLSQNEALEDVLCTR 333
BLAST of NO01G05520 vs. NCBI_GenBank
Match: WP_026720015.1 (DUF1350 domain-containing protein [Fischerella sp. PCC 9431]) HSP 1 Score: 114.4 bits (285), Expect = 9.500e-22 Identity = 88/287 (30.66%), Postives = 134/287 (46.69%), Query Frame = 0 Query: 159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPF-SLFDHAAGARLLAVAYARGENYVEG--VYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443 EW+++ ++ P +P GI+HF+GGA V P Y LLE +A +G+ IIAT PF + DH A A L + + R +E + G ++ LPV+GLGHS+G K+H+L+GS ++ +R N+L++FNN++A++++PL++++ NS F + N+A+ +FTPSP ET L+ YS+ NL+V FD DTIDQS L LLQQR Sbjct: 2 EWKEISGNWVLIPP----KPTGIVHFLGGAFVATAPHITYRLLLENIADKGFVIIAT--PFVNTLDHTAIAELALLNFERTLLRLEDREMLG---KKYLPVYGLGHSMGCKLHLLIGSL---------------FQVERAGNILISFNNYAARDAIPLIEQL-------------------------------------------NSTFSTFNFNPNLAV------------EFTPSPLETQQLIQEN----------YSIRRNLLVKFDNDTIDQSAPLAKLLQQR 199
BLAST of NO01G05520 vs. NCBI_GenBank
Match: WP_088892633.1 (DUF1350 domain-containing protein [Leptolyngbya ohadii]) HSP 1 Score: 113.6 bits (283), Expect = 1.600e-21 Identity = 84/284 (29.58%), Postives = 129/284 (45.42%), Query Frame = 0 Query: 159 EWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPFSLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPSDFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLLQQR 443 EW+++ ++ P QP IIHF+GGA V P+ Y LLE LA QGY I+AT +L R L + G +E + ++++LPV+G+GHS+G K+H+L+GS Y +R N+L++FNN+ A+ S+P+L++ L +G ++ +S LS L + FD+ +FTPSP+ET L++ Y V NL+V F+ D IDQ+ L L R Sbjct: 2 EWQELYGNWVLIPP----QPIAIIHFLGGAFVATAPQLTYRTLLEFLANQGYAIVATPFVNTLDHTTIAQRTLRI----GNLGIEHLQTDILQEELPVYGMGHSMGCKVHLLIGSL---------------YPQERAGNILISFNNYPARRSIPMLEQFSELS-KVGSQWITQFTNQLSTQFKDLSLPQL-------------ANFDV---------------------EFTPSPEETNRLIAE----------HYQVKRNLLVKFNSDDIDQTKPLTLALNDR 217
BLAST of NO01G05520 vs. NCBI_GenBank
Match: XP_020673941.1 (uncharacterized protein LOC110093403 [Dendrobium catenatum] >PKU71804.1 hypothetical protein MA16_Dca008333 [Dendrobium catenatum]) HSP 1 Score: 113.2 bits (282), Expect = 2.100e-21 Identity = 89/286 (31.12%), Postives = 137/286 (47.90%), Query Frame = 0 Query: 158 GEWRKVDDEVEVLFPEAFAQPKGIIHFVGGAVVGAFPRAAYGPLLERLARQGYCIIATSLPF-SLFDHAAGARLLAVAYARGENYVEGVYGPRIRQQLPVFGLGHSLGAKMHVLLGSSPPXXXXXXXXXXXXPYRSKRRANVLVAFNNFSAQESVPLLDEMRNLGLSIGGMGLSSKLEDVSRLITSLSALDLSGASSPNSRRETNSGFDLASKGLNMAMSFLSSLPTDIPS---DFTPSPDETWALLSSPPPSAPASSPFYSVPSNLVVSFDKDTIDQSPRLLSLL 440 G+W++++ VL P +P+ I+HF+GG VGA P+ Y LERL+ +G +IAT PF S FDH + A + + Y R + I LP FG+GHSLG+ +H+L+GS Y +R NVL+AFNN A ++PL + + + + L+T L++ + + R+ S K + + LS L D+ + DF P P+ET L+ S +Y + NL++ F DTID++P L LL Sbjct: 98 GDWKEIEG-TWVLRPR-HTRPRSIVHFIGGIFVGATPQLTYRLFLERLSDKGVLVIAT--PFASRFDHFSIADEVQLKYDRSMRSLTD-----IENDLPTFGIGHSLGSVIHLLIGSR---------------YAVQRNGNVLLAFNNKEASLAIPLFSPV-----------IVPMAQSLGPLLTQLTSSPSIRRGAEIAMRQLESLSPPILKQVLPLVEQLSPLYMDLVNGREDFIPKPEETSRLIKS----------YYGISRNLLIQFKDDTIDETPTLAKLL 338 The following BLAST results are available for this feature:
BLAST of NO01G05520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05520 ID=NO01G05520|Name=NO01G05520|organism=Nannochloropsis oceanica|type=gene|length=3457bpback to top protein sequence of NO01G05520.1 >NO01G05520.1-protein ID=NO01G05520.1-protein|Name=NO01G05520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=463bpback to top protein sequence of NO01G05520.2 >NO01G05520.2-protein ID=NO01G05520.2-protein|Name=NO01G05520.2|organism=Nannochloropsis oceanica|type=polypeptide|length=457bpback to top protein sequence of NO01G05520.3 >NO01G05520.3-protein ID=NO01G05520.3-protein|Name=NO01G05520.3|organism=Nannochloropsis oceanica|type=polypeptide|length=368bpback to top protein sequence of NO01G05520.4 >NO01G05520.4-protein ID=NO01G05520.4-protein|Name=NO01G05520.4|organism=Nannochloropsis oceanica|type=polypeptide|length=368bpback to top Synonyms
Publications
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