NO01G05480, NO01G05480 (gene) Nannochloropsis oceanica

Overview
NameNO01G05480
Unique NameNO01G05480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2226
Alignment locationchr1:1504259..1506484 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial ornithine transporter 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1504259..1506484 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_005855167.1 (mitochondrial ornithine transporter 1 [Nannochloropsis gaditana CCMP526] >EKU21191.1 mitochondrial ornithine transporter 1 [Nannochloropsis gaditana CCMP526] >EWM22765.1 mitochondrial ornithine transporter 1 [Nannochloropsis gaditana])

HSP 1 Score: 518.8 bits (1335), Expect = 1.200e-143
Identity = 271/332 (81.63%), Postives = 292/332 (87.95%), Query Frame = 0
Query:    1 MSSSSSTTXXXPNATSSISPSITQEGSAGFFPPDVVHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333
            MSS     XXXPNA +++S  +  +G A FFP DVVHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARP+AF SPIQCF++TFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRI+AD+EGYGL                  EESL+VPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDA+EMLVHVLK QG+KGLFVGLGAQFARDIPFYAFFFGTYELSL  LK YT++PQE AYL+AGGLAGVAGWAAVMPIDMAKSIIQTS NPK LIPTM+DV+R RGP+ALYSGLGVA+FRAFPANAALFLGYELARE+LD
Sbjct:    1 MSSXXXXXXXXPNAGNNLSAPMAVDGQASFFPADVVHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPEAFSSPIQCFISTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGN----ESNQESRKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKAYTTMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVARTRGPMALYSGLGVAVFRAFPANAALFLGYELAREILD 328          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: CBN79815.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 300.4 bits (768), Expect = 6.700e-78
Identity = 163/307 (53.09%), Postives = 195/307 (63.52%), Query Frame = 0
Query:   36 VHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLK----------TGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSL-RTLKIYTSVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELL 332
            V AAKDV+SSI GSA CVYTGQP DT+KVRMQARPDAF    QC   T  EE + +LWKGS PAL GAV EN VAF VN+QLKR+  D +G                           P L GG TG+FT+  +CPSDVIK KVQV R+M K           G   ++A  M  H+L+ QG++GLFVGLGAQFARD+PFYA FFGTYE  + R   +   +  E  Y +AGG+AGV GWAAVMP+D  KSIIQT+  P+ L+ T+  V R +G  AL+ GL  A+ RAFPANAALFLGYE+ R  L
Sbjct:   12 VAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWW--------------------QPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_002292901.1 (mitochondrial carrier, partial [Thalassiosira pseudonana CCMP1335] >EED90097.1 mitochondrial carrier, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 226.1 bits (575), Expect = 1.600e-55
Identity = 128/297 (43.10%), Postives = 168/297 (56.57%), Query Frame = 0
Query:   40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333
            +D+ S+ +GS  C YTGQPFDTVKVRMQ  P  F S      +  + EG+ ALWKG+VP  +G V ENA+AF VN+ LKR   D                     G  E+    P L G  TG  ++  L PS+++K K QV       G  +  + E+   +++Q GI+ LFVG  AQ  RD PFYAFFFGTYEL+    + Y  S+P+E  Y ++GG AG+ GW A MP D+ K+ +Q S   K      P +L + R RG LALY+GL   I RAFPANAALFLG E  +++ D
Sbjct:    4 RDIFSASIGSVACCYTGQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPD---------------------GSKEDPTQRPDL-GAITGCCSATVLLPSEIVKAKTQV-----VVGNVSASSTEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLRIVRERGVLALYTGLVPTIARAFPANAALFLGVETGKKIFD 273          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: EJK52909.1 (hypothetical protein THAOC_27763 [Thalassiosira oceanica])

HSP 1 Score: 219.2 bits (557), Expect = 2.000e-53
Identity = 129/326 (39.57%), Postives = 170/326 (52.15%), Query Frame = 0
Query:   40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSEN-----------------------------AVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333
            +D+ S+ +GS  C YTGQPFDTVKVRMQ  P AF S +         EG  ALWKG+VP  +G ++EN                             AVAF VN+ LKR   D E     T                   L+ PFL G  TG  ++  L PS+V+K K QV       G+    + E+   ++K+QG++ L VG  AQ  RD PFYAFFFGTYEL+    + Y  S+P+E  Y ++GG AG+ GW A MP D+ K+ +Q S + +      P +  + R RGPLALY+GL   + RAFPANAALFLG E  ++  D
Sbjct:   14 RDLFSASIGSVACCYTGQPFDTVKVRMQTNPAAFPSVMSTSSNILTNEGAAALWKGAVPTALGMIAENCSEFCLRPTLSSGTCFWLAGAIFSQSTTSAVAFGVNEALKRAFPD-ESKSDPT---------------KRPDLLKPFLMGAITGCCSATVLLPSEVVKAKTQV-----VVGDVGASSSEVYRKMIKRQGLRSLLVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWDSRVVGSYFPELFRIMRERGPLALYTGLIPTVLRAFPANAALFLGVETGKKFFD 318          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: OEU07933.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 218.0 bits (554), Expect = 4.400e-53
Identity = 118/297 (39.73%), Postives = 167/297 (56.23%), Query Frame = 0
Query:   40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRL---IPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333
            +D+ S+ +GS +C Y GQPFDT+KV+MQ  PD F   +       + EG+ A WKG+VP   G V EN +AF VN  LKR   D    G    G                SL+ PF  G  TG  ++  L PS++IKCK Q+S       E  + + +++  ++K+QG++  FVG  AQ  RD  FYA FFG YELS  T + +  S+P E  Y ++GG+AG+  W   MP D+ K+ +Q+  + K +    P ++ V++ RG   LY+GLG  + RAFPANAALFLG E  ++L D
Sbjct:   13 RDLFSAAIGSVLCCYVGQPFDTIKVKMQTNPDQFSHVVGSTNQILKNEGVAAFWKGAVPTAGGMVLENCMAFGVNAALKRAFPDTNNDGDIKEG--------------PPSLLKPFAMGAITGCCSATVLLPSEIIKCKTQIST------ERHITSSQIVKQMMKKQGMRSFFVGFDAQLCRDSCFYALFFGGYELSCYTFRTFVPSMPDELNYFMSGGIAGMGAWFVAMPFDVPKTNVQSRYDTKVMGSYFPELIRVAKQRGIGGLYAGLGPTLIRAFPANAALFLGVESGKKLFD 289          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: GAX18886.1 (solute carrier family 25 (mitochondrial ornithine transporter) member 2/15 [Fistulifera solaris])

HSP 1 Score: 216.9 bits (551), Expect = 9.800e-53
Identity = 122/298 (40.94%), Postives = 167/298 (56.04%), Query Frame = 0
Query:   39 AKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333
            A+D+ S+ +GS  C Y GQPFDTVKVRMQ  P  + + +      + +EG+ A WKG+VP  +G  +ENA+AF VN  LKR   D                          SL+ PF  G  TG  ++  L PS+++K K+QV       G+  +  +E++  +LK+QG  G+F GL AQ ARD  FYA FFG YEL     + +  S+P E  Y I+GGLAG  GW   MP D+ K+ +Q S + K     +P +L +++ RG   LYSGLG  + RAFPANAALFLG E  ++L D
Sbjct:   11 ARDIFSATIGSICCCYVGQPFDTVKVRMQTNPSIYSNVMASTQAIWMQEGVTAFWKGAVPTAMGMAAENAMAFGVNAALKRAFPD----------------PVTQSEEGPPSLLKPFAMGAITGCCSAFVLLPSEIVKAKLQV-----VVGKN-ITVQEVIQSILKRQGYSGMFAGLDAQLARDSSFYAVFFGGYELFCYGFRTFVPSMPDELNYFISGGLAGCVGWTVAMPFDVPKTNVQASYDSKIVGTYVPELLRIAKQRGIGGLYSGLGPTLVRAFPANAALFLGVETGKKLFD 286          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: GAX12008.1 (solute carrier family 25 (mitochondrial ornithine transporter) member 2/15 [Fistulifera solaris])

HSP 1 Score: 215.3 bits (547), Expect = 2.800e-52
Identity = 120/298 (40.27%), Postives = 169/298 (56.71%), Query Frame = 0
Query:   39 AKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRL---IPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333
            A+D+ S+ +GS  C Y GQPFDTVKVRMQ  P  + + +      + +EG+ A WKG+VP  +G  +ENA+AF VN  LKR   D       + G                SL+ PF  G  TG  ++  L PS+++K K+QV       G+  +  ++++  ++K+QG  G+F GL AQ ARD  FYA FFG YEL     + +  S+P E  Y I+GGLAG  GW   MP D+ K+ +Q S + K +   +P +L +++ RG   LYSGLG  + RAFPANAALFLG E  ++  D
Sbjct:   11 ARDIFSATIGSICCCYVGQPFDTVKVRMQTNPSIYSNVMASTQAIWMQEGVTAFWKGAVPTAMGMAAENAMAFGVNAALKRAFPDP---ATKSEG--------------PPSLLKPFAMGAITGCCSAFVLLPSEIVKAKLQV-----VVGKN-ITVQDVIQSIIKRQGYSGMFAGLDAQLARDSSFYAVFFGGYELFCYGFRTFVPSMPDELNYFISGGLAGCVGWTVAMPFDVPKTNVQASYDSKIIGTYVPELLKIAKQRGIGGLYSGLGPTLVRAFPANAALFLGVETGKKFFD 285          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_002186328.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >ACI65798.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 204.1 bits (518), Expect = 6.600e-49
Identity = 113/286 (39.51%), Postives = 158/286 (55.24%), Query Frame = 0
Query:   40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALF 322
            +D+ S+ +GS  C Y GQPFDTVKVRMQ  P  +   I       + EG+ A WKG+VP  +G   ENA+AF VN+ LKR   D                          SL  PF  G  TG  ++  L PS+++K K+QV       G+  + + E++  ++ +QG++G+F GL AQ ARD  FYA FFG YE+S    + +  S+P E  Y I+GGLAG+ GW   MP D+ K+ +Q   + K      P ++ +++ RG + LYSGLG  + RAFPANAALF
Sbjct:    1 RDIFSATLGSICCCYVGQPFDTVKVRMQTNPTVYSGVISSVTNILKNEGVAAFWKGAVPTAMGMALENAMAFGVNEALKRSFPD----------------DLSLDNNAMPSLTKPFAMGAMTGCCSALVLLPSEIVKAKLQV-----VVGKN-VSSGEIIKQIVSKQGVRGIFAGLDAQLARDASFYAIFFGGYEVSCYLFRTHVPSMPDELNYFISGGLAGMFGWTIAMPFDVPKTNVQARYDTKVVGSYAPELIRIAQERGVVGLYSGLGPTLVRAFPANAALF 264          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_023697486.1 (mitochondrial ornithine transporter 1-like isoform X1 [Paramormyrops kingsleyae])

HSP 1 Score: 185.7 bits (470), Expect = 2.400e-43
Identity = 111/305 (36.39%), Postives = 170/305 (55.74%), Query Frame = 0
Query:   38 AAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFS---VNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAM----DAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQE----AAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKR---LIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELAR 329
            A  ++++   G A CV  GQPFDTVKV++Q  P  +   + CF TT+R+ GL  L++G+ PAL+  ++ENAV F+     Q+L R I  +E  G                   + S +     G    IF+S  LCP++++KC++Q    M   G+T++     +  ++ ++LK++G+ GLF G+ + + R++P Y FFFG YE+S RT+ +     +     AA +++GG+ G   W AV PID  KS IQ  S   R    + T++ + RA G  ALY+GL   + RAFP+N ALFL YEL R
Sbjct:   25 AVINLVAGSAGGAACVACGQPFDTVKVKLQTFPSLYRGFLHCFQTTYRQGGLWGLYQGTTPALLSNIAENAVLFACYGTCQELTRRIFGLESVG-------------------QLSDLQNATAGSMASIFSSLVLCPTELVKCRMQAMHEMRTVGKTSLLCRVSSWSIVKNILKKEGLPGLFQGMTSTWLREVPGYFFFFGGYEVS-RTIFVNCGYSKNDLDAAALVVSGGVGGSFFWLAVYPIDSVKSRIQVLSMSGRQAGFLATLVSILRAEGVPALYAGLTPTVLRAFPSNGALFLAYELTR 309          
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_023697487.1 (mitochondrial ornithine transporter 1-like isoform X2 [Paramormyrops kingsleyae])

HSP 1 Score: 185.7 bits (470), Expect = 2.400e-43
Identity = 111/305 (36.39%), Postives = 170/305 (55.74%), Query Frame = 0
Query:   38 AAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFS---VNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAM----DAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQE----AAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKR---LIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELAR 329
            A  ++++   G A CV  GQPFDTVKV++Q  P  +   + CF TT+R+ GL  L++G+ PAL+  ++ENAV F+     Q+L R I  +E  G                   + S +     G    IF+S  LCP++++KC++Q    M   G+T++     +  ++ ++LK++G+ GLF G+ + + R++P Y FFFG YE+S RT+ +     +     AA +++GG+ G   W AV PID  KS IQ  S   R    + T++ + RA G  ALY+GL   + RAFP+N ALFL YEL R
Sbjct:   14 AVINLVAGSAGGAACVACGQPFDTVKVKLQTFPSLYRGFLHCFQTTYRQGGLWGLYQGTTPALLSNIAENAVLFACYGTCQELTRRIFGLESVG-------------------QLSDLQNATAGSMASIFSSLVLCPTELVKCRMQAMHEMRTVGKTSLLCRVSSWSIVKNILKKEGLPGLFQGMTSTWLREVPGYFFFFGGYEVS-RTIFVNCGYSKNDLDAAALVVSGGVGGSFFWLAVYPIDSVKSRIQVLSMSGRQAGFLATLVSILRAEGVPALYAGLTPTVLRAFPSNGALFLAYELTR 298          
The following BLAST results are available for this feature:
BLAST of NO01G05480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855167.11.200e-14381.63mitochondrial ornithine transporter 1 [Nannochloro... [more]
CBN79815.16.700e-7853.09conserved unknown protein [Ectocarpus siliculosus][more]
XP_002292901.11.600e-5543.10mitochondrial carrier, partial [Thalassiosira pseu... [more]
EJK52909.12.000e-5339.57hypothetical protein THAOC_27763 [Thalassiosira oc... [more]
OEU07933.14.400e-5339.73mitochondrial carrier [Fragilariopsis cylindrus CC... [more]
GAX18886.19.800e-5340.94solute carrier family 25 (mitochondrial ornithine ... [more]
GAX12008.12.800e-5240.27solute carrier family 25 (mitochondrial ornithine ... [more]
XP_002186328.16.600e-4939.51predicted protein, partial [Phaeodactylum tricornu... [more]
XP_023697486.12.400e-4336.39mitochondrial ornithine transporter 1-like isoform... [more]
XP_023697487.12.400e-4336.39mitochondrial ornithine transporter 1-like isoform... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006306NSK006306Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05480.2NO01G05480.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05480.1NO01G05480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577816gene_577Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100297g2gene7682Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05480.2NO01G05480.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05480.1NO01G05480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05480 ID=NO01G05480|Name=NO01G05480|organism=Nannochloropsis oceanica|type=gene|length=2226bp
AATAATTGCCCAGCCGCTAGCACGACACGCATCGAGAGGGGGCAACGGGT
TCGCGAGTGCAGGCAATTCGGGTGGTGGAAAAGCACCAGGAGCACTTGGA
TCGATCCATCATCGTCATCACACCACAACTCAGCCGCAACCACACTATTA
TGTCGTCCTCATCCTCCACCACCAGCACTACGCCCAACGCTACTAGCAGT
ATAAGCCCGTCCATCACCCAGGAAGGCAGCGCGGGCTTCTTCCCGCCTGA
CGTTGTGCATGCCGCCAAAGATGTTTTATCATCCATCGTGGGCTCGGCCA
TGTGCGTCTACACAGGGCAGCCATTTGACACCGgtaagtggagagatggc
aggaaggggataagacggggaaggaggattgcgggcggcattaatgacgc
ttgtgacaatgaagattgtacctcccttgctcactcttcctctcccctcc
tcccatcctgctctccccccccatccacagTTAAAGTGCGCATGCAAGCC
CGACCTGACGCATTTATGTCCCCTATCCAGTGCTTCATGACCACCTTCAG
AGAAGAAGGGCTACGGGCCTTGTGGAAAGGGAGCGTGCCGGCCCTTGTTG
GGGCTGTGAGTGAGAACGCGGTTGCTTTCAGTGTGAATCAACAACTCAAG
CGCATCATTGCCGATATGGAGGGCTACGGCTTGAGCACTGGGGGAGGTGG
AGCTGAGGCAGAGACAGAGAAGGAGGGAGGAGGGGTGGAAGAGAGTTTAA
TCGTACCATTTTTGACCGGGGGGTTTACCGGGATCTTCACCTCAGCAGCC
TTATGTCCGAGTGACGTGATAAAGTGCAAAGTCCAGGTGTCGCGGGCTAT
GCTAAAGACGGGGGAGACTGCCATGGATGCCAAGGAGATGCTGGTGCATG
TCCTAAAGCAGCAAGGGATCAAAGGCTTGTTCGTTGGGTTGGGGGCTCAG
TTTGCGCGAGATATCCCGTTCTACGCCTTCTTCTTCGGTACCTACGAGCT
CAGCCTTCGAACCCTCAAGATCTACACCTCCGTCCCGCAGGAGGCAGCCT
ATCTGATTGCAGgtgcgtgttaattgtcatcttattccctctctccttct
tcttctcccccctttctaccccttgtgaaatcgatcgcatcttttggggg
cctcgactcagccctcattccttccccctctcctccctccctccttccct
ccctccttccctccctccccagGCGGGCTAGCGGGCGTGGCGGGCTGGGC
GGCTGTAATGCCCATCGACATGGCCAAGAGCATTATTCAAACCTCATCTA
ACCCCAAGAGACTCATTCCCACCATGCTGGACGTATCGCGGGCACGAGGG
CCACTAGCTTTGTACTCAGgtaagcgaggaaggagtgagggaaggaggaa
tagaaggttcatgctctaaaataaacaggaggctggtcgtggaaggactg
caaaggtggtgtttcatgcggctgttgttggatcaacctgtacggtatta
tcccttgctttcccccttaccttgctcatctcgtcttccctcccttcctc
ttcctccccccctccttactctatttcttcaagGTTTGGGTGTGGCCATC
TTTCGTGCCTTCCCCGCCAACGCCGCATTGTTTCTAGGATACGAATTGGC
AAGAGAATTGTTGGATTAAGCAAAACGAGGAGCAACGGGGGCTCACTGTT
TGCGAAAGGCAATGGAAAGGGCAAGGGTTGGACGCTTGCCTTGTTAGGTC
TGCATGAGAGTGGGATAGAGAGAGGGCAAGAAGGAAAATAGAGGAAGAGG
AGGGAGGGGAGAATTATTTTTCTACATGTGGTGGGATGTGTGTATATCTA
ACTGCTGATATCTTATGATGCATACAACGACTGAAGCGGCAGGATGGACG
AGAAGGCCAGAACTGTGGCAAAAGCCAATGCAAATATGAGAATGTGAACG
TGTATGCGAGTGTGGCATCCAATTGTGATAGTGGAATAACAGTCTAGGCA
TGGCATGGGGGGGGGGGAGGGCAAATGAGGATGGAAAGAGAGGAAGCAAC
TGATTCTAAAATGGTACAAACAATCTAAAAATGAATGAAGTAACCGAGAA
ATTAACACAAAGATGTCAGTAAGTGCATCTGACTACCCTTATAGTGTGCA
TCTTTCCTTTATTTGTCATATCTTGTTCTGTCTTCTTTTGATTGATAGAT
TGATTGATTCTTGTCTTGTCTTTTTT
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protein sequence of NO01G05480.2

>NO01G05480.2-protein ID=NO01G05480.2-protein|Name=NO01G05480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MSSSSSTTSTTPNATSSISPSITQEGSAGFFPPDVVHAAKDVLSSIVGSA
MCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPAL
VGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGGGAEAETEKEGGGVEES
LIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLV
HVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQEA
AYLIAGAC*
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protein sequence of NO01G05480.1

>NO01G05480.1-protein ID=NO01G05480.1-protein|Name=NO01G05480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MSSSSSTTSTTPNATSSISPSITQEGSAGFFPPDVVHAAKDVLSSIVGSA
MCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPAL
VGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGGGAEAETEKEGGGVEES
LIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLV
HVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQEA
AYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRLIPTMLDVSRARGPL
ALYSGLGVAIFRAFPANAALFLGYELARELLD*
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Synonyms
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