NO01G05480, NO01G05480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_005855167.1 (mitochondrial ornithine transporter 1 [Nannochloropsis gaditana CCMP526] >EKU21191.1 mitochondrial ornithine transporter 1 [Nannochloropsis gaditana CCMP526] >EWM22765.1 mitochondrial ornithine transporter 1 [Nannochloropsis gaditana]) HSP 1 Score: 518.8 bits (1335), Expect = 1.200e-143 Identity = 271/332 (81.63%), Postives = 292/332 (87.95%), Query Frame = 0 Query: 1 MSSSSSTTXXXPNATSSISPSITQEGSAGFFPPDVVHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333 MSS XXXPNA +++S + +G A FFP DVVHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARP+AF SPIQCF++TFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRI+AD+EGYGL EESL+VPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDA+EMLVHVLK QG+KGLFVGLGAQFARDIPFYAFFFGTYELSL LK YT++PQE AYL+AGGLAGVAGWAAVMPIDMAKSIIQTS NPK LIPTM+DV+R RGP+ALYSGLGVA+FRAFPANAALFLGYELARE+LD Sbjct: 1 MSSXXXXXXXXPNAGNNLSAPMAVDGQASFFPADVVHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPEAFSSPIQCFISTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGN----ESNQESRKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKAYTTMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVARTRGPMALYSGLGVAVFRAFPANAALFLGYELAREILD 328
BLAST of NO01G05480 vs. NCBI_GenBank
Match: CBN79815.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 300.4 bits (768), Expect = 6.700e-78 Identity = 163/307 (53.09%), Postives = 195/307 (63.52%), Query Frame = 0 Query: 36 VHAAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLK----------TGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSL-RTLKIYTSVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELL 332 V AAKDV+SSI GSA CVYTGQP DT+KVRMQARPDAF QC T EE + +LWKGS PAL GAV EN VAF VN+QLKR+ D +G P L GG TG+FT+ +CPSDVIK KVQV R+M K G ++A M H+L+ QG++GLFVGLGAQFARD+PFYA FFGTYE + R + + E Y +AGG+AGV GWAAVMP+D KSIIQT+ P+ L+ T+ V R +G AL+ GL A+ RAFPANAALFLGYE+ R L Sbjct: 12 VAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWW--------------------QPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_002292901.1 (mitochondrial carrier, partial [Thalassiosira pseudonana CCMP1335] >EED90097.1 mitochondrial carrier, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 226.1 bits (575), Expect = 1.600e-55 Identity = 128/297 (43.10%), Postives = 168/297 (56.57%), Query Frame = 0 Query: 40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333 +D+ S+ +GS C YTGQPFDTVKVRMQ P F S + + EG+ ALWKG+VP +G V ENA+AF VN+ LKR D G E+ P L G TG ++ L PS+++K K QV G + + E+ +++Q GI+ LFVG AQ RD PFYAFFFGTYEL+ + Y S+P+E Y ++GG AG+ GW A MP D+ K+ +Q S K P +L + R RG LALY+GL I RAFPANAALFLG E +++ D Sbjct: 4 RDIFSASIGSVACCYTGQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPD---------------------GSKEDPTQRPDL-GAITGCCSATVLLPSEIVKAKTQV-----VVGNVSASSTEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLRIVRERGVLALYTGLVPTIARAFPANAALFLGVETGKKIFD 273
BLAST of NO01G05480 vs. NCBI_GenBank
Match: EJK52909.1 (hypothetical protein THAOC_27763 [Thalassiosira oceanica]) HSP 1 Score: 219.2 bits (557), Expect = 2.000e-53 Identity = 129/326 (39.57%), Postives = 170/326 (52.15%), Query Frame = 0 Query: 40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSEN-----------------------------AVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333 +D+ S+ +GS C YTGQPFDTVKVRMQ P AF S + EG ALWKG+VP +G ++EN AVAF VN+ LKR D E T L+ PFL G TG ++ L PS+V+K K QV G+ + E+ ++K+QG++ L VG AQ RD PFYAFFFGTYEL+ + Y S+P+E Y ++GG AG+ GW A MP D+ K+ +Q S + + P + + R RGPLALY+GL + RAFPANAALFLG E ++ D Sbjct: 14 RDLFSASIGSVACCYTGQPFDTVKVRMQTNPAAFPSVMSTSSNILTNEGAAALWKGAVPTALGMIAENCSEFCLRPTLSSGTCFWLAGAIFSQSTTSAVAFGVNEALKRAFPD-ESKSDPT---------------KRPDLLKPFLMGAITGCCSATVLLPSEVVKAKTQV-----VVGDVGASSSEVYRKMIKRQGLRSLLVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWDSRVVGSYFPELFRIMRERGPLALYTGLIPTVLRAFPANAALFLGVETGKKFFD 318
BLAST of NO01G05480 vs. NCBI_GenBank
Match: OEU07933.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 218.0 bits (554), Expect = 4.400e-53 Identity = 118/297 (39.73%), Postives = 167/297 (56.23%), Query Frame = 0 Query: 40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRL---IPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333 +D+ S+ +GS +C Y GQPFDT+KV+MQ PD F + + EG+ A WKG+VP G V EN +AF VN LKR D G G SL+ PF G TG ++ L PS++IKCK Q+S E + + +++ ++K+QG++ FVG AQ RD FYA FFG YELS T + + S+P E Y ++GG+AG+ W MP D+ K+ +Q+ + K + P ++ V++ RG LY+GLG + RAFPANAALFLG E ++L D Sbjct: 13 RDLFSAAIGSVLCCYVGQPFDTIKVKMQTNPDQFSHVVGSTNQILKNEGVAAFWKGAVPTAGGMVLENCMAFGVNAALKRAFPDTNNDGDIKEG--------------PPSLLKPFAMGAITGCCSATVLLPSEIIKCKTQIST------ERHITSSQIVKQMMKKQGMRSFFVGFDAQLCRDSCFYALFFGGYELSCYTFRTFVPSMPDELNYFMSGGIAGMGAWFVAMPFDVPKTNVQSRYDTKVMGSYFPELIRVAKQRGIGGLYAGLGPTLIRAFPANAALFLGVESGKKLFD 289
BLAST of NO01G05480 vs. NCBI_GenBank
Match: GAX18886.1 (solute carrier family 25 (mitochondrial ornithine transporter) member 2/15 [Fistulifera solaris]) HSP 1 Score: 216.9 bits (551), Expect = 9.800e-53 Identity = 122/298 (40.94%), Postives = 167/298 (56.04%), Query Frame = 0 Query: 39 AKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333 A+D+ S+ +GS C Y GQPFDTVKVRMQ P + + + + +EG+ A WKG+VP +G +ENA+AF VN LKR D SL+ PF G TG ++ L PS+++K K+QV G+ + +E++ +LK+QG G+F GL AQ ARD FYA FFG YEL + + S+P E Y I+GGLAG GW MP D+ K+ +Q S + K +P +L +++ RG LYSGLG + RAFPANAALFLG E ++L D Sbjct: 11 ARDIFSATIGSICCCYVGQPFDTVKVRMQTNPSIYSNVMASTQAIWMQEGVTAFWKGAVPTAMGMAAENAMAFGVNAALKRAFPD----------------PVTQSEEGPPSLLKPFAMGAITGCCSAFVLLPSEIVKAKLQV-----VVGKN-ITVQEVIQSILKRQGYSGMFAGLDAQLARDSSFYAVFFGGYELFCYGFRTFVPSMPDELNYFISGGLAGCVGWTVAMPFDVPKTNVQASYDSKIVGTYVPELLRIAKQRGIGGLYSGLGPTLVRAFPANAALFLGVETGKKLFD 286
BLAST of NO01G05480 vs. NCBI_GenBank
Match: GAX12008.1 (solute carrier family 25 (mitochondrial ornithine transporter) member 2/15 [Fistulifera solaris]) HSP 1 Score: 215.3 bits (547), Expect = 2.800e-52 Identity = 120/298 (40.27%), Postives = 169/298 (56.71%), Query Frame = 0 Query: 39 AKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKRL---IPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELARELLD 333 A+D+ S+ +GS C Y GQPFDTVKVRMQ P + + + + +EG+ A WKG+VP +G +ENA+AF VN LKR D + G SL+ PF G TG ++ L PS+++K K+QV G+ + ++++ ++K+QG G+F GL AQ ARD FYA FFG YEL + + S+P E Y I+GGLAG GW MP D+ K+ +Q S + K + +P +L +++ RG LYSGLG + RAFPANAALFLG E ++ D Sbjct: 11 ARDIFSATIGSICCCYVGQPFDTVKVRMQTNPSIYSNVMASTQAIWMQEGVTAFWKGAVPTAMGMAAENAMAFGVNAALKRAFPDP---ATKSEG--------------PPSLLKPFAMGAITGCCSAFVLLPSEIVKAKLQV-----VVGKN-ITVQDVIQSIIKRQGYSGMFAGLDAQLARDSSFYAVFFGGYELFCYGFRTFVPSMPDELNYFISGGLAGCVGWTVAMPFDVPKTNVQASYDSKIIGTYVPELLKIAKQRGIGGLYSGLGPTLVRAFPANAALFLGVETGKKFFD 285
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_002186328.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >ACI65798.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 204.1 bits (518), Expect = 6.600e-49 Identity = 113/286 (39.51%), Postives = 158/286 (55.24%), Query Frame = 0 Query: 40 KDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAMDAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYT-SVPQEAAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPK---RLIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALF 322 +D+ S+ +GS C Y GQPFDTVKVRMQ P + I + EG+ A WKG+VP +G ENA+AF VN+ LKR D SL PF G TG ++ L PS+++K K+QV G+ + + E++ ++ +QG++G+F GL AQ ARD FYA FFG YE+S + + S+P E Y I+GGLAG+ GW MP D+ K+ +Q + K P ++ +++ RG + LYSGLG + RAFPANAALF Sbjct: 1 RDIFSATLGSICCCYVGQPFDTVKVRMQTNPTVYSGVISSVTNILKNEGVAAFWKGAVPTAMGMALENAMAFGVNEALKRSFPD----------------DLSLDNNAMPSLTKPFAMGAMTGCCSALVLLPSEIVKAKLQV-----VVGKN-VSSGEIIKQIVSKQGVRGIFAGLDAQLARDASFYAIFFGGYEVSCYLFRTHVPSMPDELNYFISGGLAGMFGWTIAMPFDVPKTNVQARYDTKVVGSYAPELIRIAQERGVVGLYSGLGPTLVRAFPANAALF 264
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_023697486.1 (mitochondrial ornithine transporter 1-like isoform X1 [Paramormyrops kingsleyae]) HSP 1 Score: 185.7 bits (470), Expect = 2.400e-43 Identity = 111/305 (36.39%), Postives = 170/305 (55.74%), Query Frame = 0 Query: 38 AAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFS---VNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAM----DAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQE----AAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKR---LIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELAR 329 A ++++ G A CV GQPFDTVKV++Q P + + CF TT+R+ GL L++G+ PAL+ ++ENAV F+ Q+L R I +E G + S + G IF+S LCP++++KC++Q M G+T++ + ++ ++LK++G+ GLF G+ + + R++P Y FFFG YE+S RT+ + + AA +++GG+ G W AV PID KS IQ S R + T++ + RA G ALY+GL + RAFP+N ALFL YEL R Sbjct: 25 AVINLVAGSAGGAACVACGQPFDTVKVKLQTFPSLYRGFLHCFQTTYRQGGLWGLYQGTTPALLSNIAENAVLFACYGTCQELTRRIFGLESVG-------------------QLSDLQNATAGSMASIFSSLVLCPTELVKCRMQAMHEMRTVGKTSLLCRVSSWSIVKNILKKEGLPGLFQGMTSTWLREVPGYFFFFGGYEVS-RTIFVNCGYSKNDLDAAALVVSGGVGGSFFWLAVYPIDSVKSRIQVLSMSGRQAGFLATLVSILRAEGVPALYAGLTPTVLRAFPSNGALFLAYELTR 309
BLAST of NO01G05480 vs. NCBI_GenBank
Match: XP_023697487.1 (mitochondrial ornithine transporter 1-like isoform X2 [Paramormyrops kingsleyae]) HSP 1 Score: 185.7 bits (470), Expect = 2.400e-43 Identity = 111/305 (36.39%), Postives = 170/305 (55.74%), Query Frame = 0 Query: 38 AAKDVLSSIVGSAMCVYTGQPFDTVKVRMQARPDAFMSPIQCFMTTFREEGLRALWKGSVPALVGAVSENAVAFS---VNQQLKRIIADMEGYGLSTGGXXXXXXXXXXGGGVEESLIVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGETAM----DAKEMLVHVLKQQGIKGLFVGLGAQFARDIPFYAFFFGTYELSLRTLKIYTSVPQE----AAYLIAGGLAGVAGWAAVMPIDMAKSIIQTSSNPKR---LIPTMLDVSRARGPLALYSGLGVAIFRAFPANAALFLGYELAR 329 A ++++ G A CV GQPFDTVKV++Q P + + CF TT+R+ GL L++G+ PAL+ ++ENAV F+ Q+L R I +E G + S + G IF+S LCP++++KC++Q M G+T++ + ++ ++LK++G+ GLF G+ + + R++P Y FFFG YE+S RT+ + + AA +++GG+ G W AV PID KS IQ S R + T++ + RA G ALY+GL + RAFP+N ALFL YEL R Sbjct: 14 AVINLVAGSAGGAACVACGQPFDTVKVKLQTFPSLYRGFLHCFQTTYRQGGLWGLYQGTTPALLSNIAENAVLFACYGTCQELTRRIFGLESVG-------------------QLSDLQNATAGSMASIFSSLVLCPTELVKCRMQAMHEMRTVGKTSLLCRVSSWSIVKNILKKEGLPGLFQGMTSTWLREVPGYFFFFGGYEVS-RTIFVNCGYSKNDLDAAALVVSGGVGGSFFWLAVYPIDSVKSRIQVLSMSGRQAGFLATLVSILRAEGVPALYAGLTPTVLRAFPSNGALFLAYELTR 298 The following BLAST results are available for this feature:
BLAST of NO01G05480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05480 ID=NO01G05480|Name=NO01G05480|organism=Nannochloropsis oceanica|type=gene|length=2226bpback to top protein sequence of NO01G05480.2 >NO01G05480.2-protein ID=NO01G05480.2-protein|Name=NO01G05480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=259bpback to top protein sequence of NO01G05480.1 >NO01G05480.1-protein ID=NO01G05480.1-protein|Name=NO01G05480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bpback to top Synonyms
Publications
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