NO01G04160, NO01G04160 (gene) Nannochloropsis oceanica

Overview
NameNO01G04160
Unique NameNO01G04160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1986
Alignment locationchr1:1112495..1114480 +

Link to JBrowse

Properties
Property NameValue
DescriptionAldose 1-epimerase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1112495..1114480 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0016853isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011013Gal_mutarotase_SF_dom
IPR008183Aldose_1/G6P_1-epimerase
Homology
BLAST of NO01G04160 vs. NCBI_GenBank
Match: EWM29356.1 (aldose 1-epimerase [Nannochloropsis gaditana])

HSP 1 Score: 415.6 bits (1067), Expect = 1.800e-112
Identity = 212/387 (54.78%), Postives = 253/387 (65.37%), Query Frame = 0
Query:   24 AVHSFEVSNGSLSISMMDYGATLISVRAPDRDGKLDNVTLFSNKFGK---NEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDPAASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWLSEEKGEQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVFQTIPR 408
            +VH ++ SNG + +S++D+GATL SV+ PDRDGK++ VTL      +     MY G TVGRVANRVANG F LDGK YTLA NNGPN LHGG +GFD+++W+G  F +  AVGV FTL SPDG+EGYPG V +Q  YS+L  +DVLEMD +AETDAATP+ LSNHAYWNL G         K +DH L V AS ILEVGP+QIPTGV QPV  TPFDLR   G  LG+RI  IDGGGK GFDHC+V++ YD AASR          EK E+V   +                                     R M V GTQPGLQ+YTANWL EE G+QH AVCLETEFFPNA+NDP  G+ + V+LRPGQ+YRHFT H F  +P+
Sbjct:   89 SVHRYDCSNGRVHVSLLDFGATLFSVQVPDRDGKIEEVTLNVTSLDQLLHKNMYFGSTVGRVANRVANGRFTLDGKVYTLAKNNGPNHLHGGKEGFDQKIWKGYPFTSASAVGVCFTLDSPDGEEGYPGNVAIQVTYSLLAGEDVLEMDVKAETDAATPLALSNHAYWNLSGNLK-----NKIYDHKLRVAASSILEVGPHQIPTGVFQPVLQTPFDLRAEEGISLGDRIQQIDGGGKAGFDHCFVVDGYDRAASR----------EKSEHVRDAE--------DEVQEKGSPESWIRARARFMATLVDPKSGRAMDVRGTQPGLQVYTANWLDEEDGQQHAAVCLETEFFPNAVNDPKVGSVDDVILRPGQIYRHFTSHRFYNLPK 452          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: XP_005854121.1 (aldose 1-epimerase, partial [Nannochloropsis gaditana CCMP526] >EKU22242.1 aldose 1-epimerase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 270.0 bits (689), Expect = 1.200e-68
Identity = 154/343 (44.90%), Postives = 185/343 (53.94%), Query Frame = 0
Query:   24 AVHSFEVSNGSLSISMMDYGATLISVRAPDRDGKLDNVTLFSNKFGK---NEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDPAASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWLSEEKGEQHGA 364
            +VH ++ SNG + +S++D+GATL SV+ PDRDGK++ VTL      +     MY G TVGRVANRVANG F LDGK YTLA NN PN LHGG +GFD+++W+G  F +  AVGV FTL SPDG+EGYPG V +Q                                                 +DH L V AS ILEVGP+QIPTGV QPV  TPFDLR   G  LG+RI  IDGGGKPGFDHC+V++ YD AASR          EK E++   +                                     R M V GTQPGLQ+YTANWL EE G+QH A
Sbjct:   27 SVHRYDCSNGRVHVSLLDFGATLFSVQVPDRDGKIEEVTLNVTSLDQLLHKNMYFGSTVGRVANRVANGRFTLDGKVYTLAKNNAPNHLHGGKEGFDQKIWKGYPFTSASAVGVCFTLDSPDGEEGYPGNVAIQ------------------------------------------------IYDHKLRVAASSILEVGPHQIPTGVFQPVLQTPFDLRAEEGIILGDRIQQIDGGGKPGFDHCFVVDGYDRAASR----------EKSEHMRDAE--------DEVQEKGSPESWIRARARFMATLVDPKSGRAMDVRGTQPGLQVYTANWLDEEDGQQHAA 303          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: WP_012910340.1 (galactose mutarotase [Pirellula staleyi] >ADB16077.1 Aldose 1-epimerase [Pirellula staleyi DSM 6068])

HSP 1 Score: 252.7 bits (644), Expect = 2.000e-63
Identity = 148/392 (37.76%), Postives = 203/392 (51.79%), Query Frame = 0
Query:   23 TAVHSFEVSNGS-LSISMMDYGATLISVRAPDRDGKLDNVTL-FSNKFG--KNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLI--DGGGKPGFDHCYVIEEYDP--AASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWLSEEKG----EQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVF 403
            T +  + + NGS L + +++YGAT++SV +PDR+GK  N+TL F +  G  +   Y G TVGR  NR+A G FKLDG +YTLA NNGPN LHGG++ FD  +W  +  K D +VG+ F+  S DG+EGYPG +  Q  YS+  D + L M++ A TD AT +NL+NH YWNLGG  +G     +  DH L + A   L V    IPTG L PV+GT  D       ++G RI  +  +     G+DHCYV+   D   A +  V   K G                                                 RVM +  T+PG+Q+Y  N+L   +G    +QH A CLET+ +P++ N P   A  S VL+PG  Y+  T H F
Sbjct:   59 TPMEMYSLDNGSGLRVKLINYGATVVSVESPDREGKFTNLTLSFESPTGYLERHPYFGSTVGRYCNRIAKGKFKLDGAEYTLAVNNGPNHLHGGLKAFDAVVWNAEEVKTDSSVGIKFSYTSKDGEEGYPGNLRAQVTYSVTKDNE-LRMEYEATTDKATVVNLTNHCYWNLGGAGSG-----QILDHHLQIEADKFLPVDAGGIPTGELAPVKGTAMDFT--KTEKIGARIDELKKEPHTTKGYDHCYVLRNQDAKLALAATVKDPKSG-------------------------------------------------RVMTISTTEPGIQLYCGNFLDGSEGGGGFKQHEAFCLETQHYPDSPNQP---AFPSTVLKPGAKYQSTTVHQF 390          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: OYV89045.1 (galactose-1-epimerase [Planctomycetia bacterium 21-64-5])

HSP 1 Score: 248.8 bits (634), Expect = 2.900e-62
Identity = 151/396 (38.13%), Postives = 203/396 (51.26%), Query Frame = 0
Query:   20 PPDTAVHSFEVSNG-SLSISMMDYGATLISVRAPDRDGKLDNVTLFSNKFG---KNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDPAA---SRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWLS---EEKG---EQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVF 403
            P    V  F ++N   L++ +++YGA L SVR PD++GK   VTL  +          Y G T GRVANR+A G F LDG +Y LATNNGPN LHGG++GFDK +W  +      AVGV  +  SPDGDEGYPG ++V   Y+ L D++ L++D+ A TD ATPINL+NH YWNL     GGK       H L ++A   + V  N IPTG L+ V+GTP D       ++G+R+  +    K G+DHCYV+ +  P A   + R+     G                                                 RVM +Y T+P +Q YT N+L    + +G    QH A CLE E +P+A+N P      S VL+PG+ YR  T H F
Sbjct:   34 PDGRQVDQFTLTNDRGLTVKIINYGAILTSVRVPDKNGKPGEVTLGFDTLAPYLAGHPYFGATCGRVANRIAKGRFTLDGVEYKLATNNGPNHLHGGLKGFDKALWTAEPIDKPGAVGVRLSHVSPDGDEGYPGKLSVTVAYT-LTDKNELKIDYTATTDKATPINLTNHTYWNLAD---GGK--SDVLGHVLEIHADRYVPVDANLIPTGELKSVKGTPMDFT--KPMEIGSRMDQVPSEPK-GYDHCYVLNQEPPGALTLAARLREPASG-------------------------------------------------RVMEIYTTEPAIQFYTGNFLDASIKSRGAVYRQHHAFCLEAEHYPDAVNQP---KFPSTVLKPGESYRQTTVHKF 368          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: WP_105357180.1 (galactose mutarotase [Blastopirellula marina] >PQO30851.1 galactose-1-epimerase [Blastopirellula marina] >PTL42704.1 galactose mutarotase [Blastopirellula marina])

HSP 1 Score: 247.7 bits (631), Expect = 6.400e-62
Identity = 143/384 (37.24%), Postives = 202/384 (52.60%), Query Frame = 0
Query:   28 FEVSNGSLSISMMDYGATLISVRAPDRDGKLDNVTLFSNKFGKNE---MYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDP--AASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWL----SEEKGEQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVF 403
            F V NG L + +++YGA+++S++APD++G L NV +  +   + E    Y G TVGR ANR+A G F LDGK+Y+LA NNG N+LHGG +GF++ +W+ K  K   AVGV F+  SP G+EGYPG +TV   Y +L   + L MD+ AETDA T +NL+NH YWNL G ++G     K +DH L + A   + V    IPTG    V+GTP D    +   +G  +    GG   G+DHCYV+   D   A +  V   K G                                                 RVM +Y T+PG+Q+YT N+L    +E++  QH A CLET+ +P+  N P      +  L+PG+ ++  T H F
Sbjct:   54 FTVKNGDLEMELINYGASIVSLKAPDKNGTLVNVNVGFDDVSRYEGAHPYFGATVGRYANRIAKGKFSLDGKEYSLALNNGENTLHGGEKGFNRYVWDAKEAKQGDAVGVTFSRTSPAGEEGYPGALTVSVSY-LLTGDNQLVMDYAAETDAPTVLNLTNHCYWNLAGAESG-----KVYDHELKLEADAYIPVSDALIPTGKEATVKGTPMDFT--TMKPIGKDLQ-ATGGDPIGYDHCYVLRSQDGTLALAATVKDPKSG-------------------------------------------------RVMEIYTTEPGIQLYTGNFLTGAAAEKRLNQHEAFCLETQHYPDTPNQPN---FPTTTLKPGEKFQSKTVHKF 376          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: APW62850.1 (Aldose 1-epimerase [Paludisphaera borealis])

HSP 1 Score: 247.3 bits (630), Expect = 8.300e-62
Identity = 149/396 (37.63%), Postives = 211/396 (53.28%), Query Frame = 0
Query:   20 PPDTAVHSFEVSNGSLSISMMDYGATLISVRAPDRDGKLDNVTL----FSNKFGKNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDPAASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWL-SEEKG------EQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVFQT 405
            P    V  + + NG +++ +  YGA + S+  PDRDGKLD+V L     +   GK+  Y G TVGRVANRVA G F L+G +YTLATNNGPN+LHGG++GFDK +W+ +  ++     V  +  SPDG+EGYPG ++V  ++++  D D L++++ AETD ATP+NLSNH+Y+NL     GGK+     DH + +NA     V    IPTG + PV  TP+DLR    + +G RI  +    + GFDH +V+   D            GK     +V   K                                     RV+ V  T+PG+Q YT N+L   +KG      +QH A+CLET+ FP++IN P   +  + VL PG+ Y   T + F T
Sbjct:   10 PDGKTVDLYVLQNGRITVKISTYGAIITSIEVPDRDGKLDDVVLGFDDLTGYLGKHP-YFGATVGRVANRVAKGKFTLNGHEYTLATNNGPNTLHGGLKGFDKVVWKAEELESGDGPSVRLSYTSPDGEEGYPGNLSVSILFTVTAD-DKLKIEYTAETDKATPVNLSNHSYFNL-----GGKNSDTIRDHEITLNADRYTPVDDTLIPTGEIAPVADTPYDLR--KPTVIGARIDRLQNEPR-GFDHNFVLNNPD------------GKLTLAAHVYDPK-----------------------------------SGRVLEVSTTEPGVQFYTGNFLDGTDKGKGGVAYKQHQAICLETQHFPDSINHP---SFPNTVLEPGKKYSQTTVYTFST 345          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: WP_076351285.1 (galactose mutarotase [Paludisphaera borealis])

HSP 1 Score: 247.3 bits (630), Expect = 8.300e-62
Identity = 149/396 (37.63%), Postives = 211/396 (53.28%), Query Frame = 0
Query:   20 PPDTAVHSFEVSNGSLSISMMDYGATLISVRAPDRDGKLDNVTL----FSNKFGKNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDPAASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWL-SEEKG------EQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVFQT 405
            P    V  + + NG +++ +  YGA + S+  PDRDGKLD+V L     +   GK+  Y G TVGRVANRVA G F L+G +YTLATNNGPN+LHGG++GFDK +W+ +  ++     V  +  SPDG+EGYPG ++V  ++++  D D L++++ AETD ATP+NLSNH+Y+NL     GGK+     DH + +NA     V    IPTG + PV  TP+DLR    + +G RI  +    + GFDH +V+   D            GK     +V   K                                     RV+ V  T+PG+Q YT N+L   +KG      +QH A+CLET+ FP++IN P   +  + VL PG+ Y   T + F T
Sbjct:   47 PDGKTVDLYVLQNGRITVKISTYGAIITSIEVPDRDGKLDDVVLGFDDLTGYLGKHP-YFGATVGRVANRVAKGKFTLNGHEYTLATNNGPNTLHGGLKGFDKVVWKAEELESGDGPSVRLSYTSPDGEEGYPGNLSVSILFTVTAD-DKLKIEYTAETDKATPVNLSNHSYFNL-----GGKNSDTIRDHEITLNADRYTPVDDTLIPTGEIAPVADTPYDLR--KPTVIGARIDRLQNEPR-GFDHNFVLNNPD------------GKLTLAAHVYDPK-----------------------------------SGRVLEVSTTEPGVQFYTGNFLDGTDKGKGGVAYKQHQAICLETQHFPDSINHP---SFPNTVLEPGKKYSQTTVYTFST 382          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: WP_105335990.1 (galactose mutarotase [Blastopirellula marina] >PQO45499.1 galactose-1-epimerase [Blastopirellula marina])

HSP 1 Score: 247.3 bits (630), Expect = 8.300e-62
Identity = 151/393 (38.42%), Postives = 199/393 (50.64%), Query Frame = 0
Query:   20 PPDTAVHSFEVSNGS-LSISMMDYGATLISVRAPDRDGKLDNVTL-FSNKFG--KNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVIEEYDP--AASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWLSEEKG----EQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVF 403
            P  T +  +EV NG+ LS+ +++YGA + SV  PD+DG++ N+ + F N  G      Y G TVGR ANR+A G F LDGK+YTLATNNGPNSLHGG +GFDK +W  K  +  +AVGV F   + DG+EGYPG + V   Y++  D + L MD+ A TDA T +NL+NH YWNL G  +G     K +DH L + A   L V    IPTG L+ V+GTP D    S   +G  +    GG   G+DHCYV+ +     A +  V   K G                                                 RVM V+ TQPG+Q Y+ N+L          QH A CLET+ FP+    P +    S  L PG+ +   T H F
Sbjct:   48 PDGTTIVQYEVDNGNGLSMKLINYGAIVTSVSTPDKDGEVANINVGFDNLEGYLSGPPYFGATVGRYANRIAKGKFTLDGKEYTLATNNGPNSLHGGEKGFDKVVWASKKIETPEAVGVQFDYTAKDGEEGYPGNLKVTVKYTLTPD-NTLVMDYTATTDAKTVLNLTNHNYWNLAGAKSG-----KNYDHQLKLEAEKYLPVDETLIPTGELESVKGTPMDFT--SFKAIGKDLQ-ATGGDPVGYDHCYVLSDDTDKLALAATVKEPKSG-------------------------------------------------RVMEVWTTQPGIQFYSGNFLDGSDANAGLNQHEAFCLETQHFPDT---PNQEGFPSATLEPGETFHETTVHKF 379          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: WP_002650679.1 (galactose mutarotase [Blastopirellula marina] >EAQ79063.1 putative aldose 1-epimerase [Blastopirellula marina DSM 3645])

HSP 1 Score: 245.7 bits (626), Expect = 2.400e-61
Identity = 143/384 (37.24%), Postives = 202/384 (52.60%), Query Frame = 0
Query:   28 FEVSNGSLSISMMDYGATLISVRAPDRDGKLDNVTLFSNK---FGKNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKPGFDHCYVI--EEYDPAASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWLS----EEKGEQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVF 403
            F + NG L + +++YGAT++S++APD++G L NVT+  +    +     Y G TVGR ANR+A G F LDG++Y+LA NNG N+LHGG +GF + +W+ +  K   +VGV FT  SPDG+EGYPG +TV   Y +L   + L MD+ A TDAAT +NL+NH YWNL G  +G     K +DH L + ++  L V    IPTG   PV+GTP D    +   +G  +    GG   G+DHC+V+  +  + A +  +   K G                                                 RVM+VY TQPG+Q YT N+LS    E +  QH A CLET+ +P+  N P      +  L+PG+ +   T H F
Sbjct:   58 FTIKNGDLEMELINYGATIVSLKAPDKNGVLANVTVGLDDVDLYEGGHPYFGATVGRFANRIAKGKFSLDGQEYSLALNNGENTLHGGTKGFSRYVWDAQEVKEANSVGVAFTRTSPDGEEGYPGALTVTVQY-LLTGDNQLVMDYAATTDAATVLNLTNHCYWNLSGVGSG-----KVYDHQLKLESNAYLPVSDALIPTGKEAPVKGTPMDFT--TFKPVGQDLQ-ATGGDPVGYDHCFVLGSQSGELALAATMKDPKSG-------------------------------------------------RVMQVYTTQPGIQFYTGNFLSGLPAEARIGQHEAFCLETQHYPDTPNQPN---FPTSTLKPGEKFHEQTVHQF 380          
BLAST of NO01G04160 vs. NCBI_GenBank
Match: WP_105331957.1 (galactose mutarotase [Blastopirellula marina] >PQO32946.1 galactose-1-epimerase [Blastopirellula marina])

HSP 1 Score: 245.4 bits (625), Expect = 3.200e-61
Identity = 154/394 (39.09%), Postives = 202/394 (51.27%), Query Frame = 0
Query:   20 PPDTAVHSFEVSNGS-LSISMMDYGATLISVRAPDRDGKLDNVTL-FSNKFG--KNEMYMGVTVGRVANRVANGMFKLDGKDYTLATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGFVTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHIRKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRIPLIDGGGKP-GFDHCYVI--EEYDPAASRRVTSTKGGKKEKGENVDKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVMRVYGTQPGLQIYTANWL--SEEKG--EQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYHVF 403
            P  T +  + V NG+ L + +++YGA + S+ APD+DGK +N+ + F N  G      Y G TVGR ANR+A G F LDGK YTLATNNGPNSLHGGI+GFDK +W  K  +  +AVGV F   + DG+EGYPG + V   Y+ L  ++ L MD+ A TDA T +NL+NH YWNL G  +G     K +DH L + +   L V    IPTG L  V+GTP D    S   +G  I   + GG P G+DHCYV+  +  D A +  V     G                                                 RVM V+ TQPG+Q Y+ N+L  SE  G   QH A CLET+ +P+    P +    S  L PG+ +   T H F
Sbjct:   48 PDGTTIVKYTVDNGNGLKMELINYGAIMTSLSAPDKDGKSENINVGFDNLDGYLAGPPYFGATVGRYANRIAKGKFTLDGKQYTLATNNGPNSLHGGIKGFDKVVWASKKIETPEAVGVQFDYTAKDGEEGYPGNLKVTVKYT-LTPKNELVMDYTATTDAKTVLNLTNHNYWNLAGAKSG-----KNYDHQLKLESDKYLPVDETLIPTGELATVKGTPMDFT--SFKAIGKDIQ--ETGGDPVGYDHCYVLTSQSGDLALAATVKDPTSG-------------------------------------------------RVMEVWTTQPGIQFYSGNFLDGSEANGGLNQHEAFCLETQHYPDT---PNQEGFPSATLEPGETFHETTVHKF 379          
The following BLAST results are available for this feature:
BLAST of NO01G04160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29356.11.800e-11254.78aldose 1-epimerase [Nannochloropsis gaditana][more]
XP_005854121.11.200e-6844.90aldose 1-epimerase, partial [Nannochloropsis gadit... [more]
WP_012910340.12.000e-6337.76galactose mutarotase [Pirellula staleyi] >ADB16077... [more]
OYV89045.12.900e-6238.13galactose-1-epimerase [Planctomycetia bacterium 21... [more]
WP_105357180.16.400e-6237.24galactose mutarotase [Blastopirellula marina] >PQO... [more]
APW62850.18.300e-6237.63Aldose 1-epimerase [Paludisphaera borealis][more]
WP_076351285.18.300e-6237.63galactose mutarotase [Paludisphaera borealis][more]
WP_105335990.18.300e-6238.42galactose mutarotase [Blastopirellula marina] >PQO... [more]
WP_002650679.12.400e-6137.24galactose mutarotase [Blastopirellula marina] >EAQ... [more]
WP_105331957.13.200e-6139.09galactose mutarotase [Blastopirellula marina] >PQO... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007872NSK007872Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04160.1NO01G04160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577308gene_431Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100028g50gene1281Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04160.1NO01G04160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04160 ID=NO01G04160|Name=NO01G04160|organism=Nannochloropsis oceanica|type=gene|length=1986bp
CAACAGACCCCCAACGCCCGTCGCATATCATGTCTCAGTCTACCCCTCCC
TACGCCATTAAACGGATCTCAGCTGGGCTGTCTGGTCCCCCTGACACGGC
CGTGCATAGTTTTGAGGTGTCGAACGGCTCTCTCAGCATCTCGATGATGG
ACTACGGCGCGACACTCATCTCCGTTCGAGCCCCGGACCGGGACGGCAAA
TTAGACAATGTTACGCTTTTCTCAAATAAATTTGGAAAGAACGAAATGTA
CATGGGTGTAACGGTTGGGCGCGTGGCCAATCGGGTGGCAAACGGCATGT
TTAAGCTGGACGGCAAGgtacgtggcttgtataggaacgggaaaaaggtg
tgttgggagggccgggagaaacgtttcctacaccgcaaaaggtcatggag
cctcacggatgaaaactcatggtattgctcataagtctctccgaaatttc
ggtgcctcgtaccttgtctcgtcgttcttagcacatttggcctcaaccat
ttgtccccccacccttgaccacaaacctctccttctcttaaattatagGA
CTACACACTGGCGACCAACAACGGGCCCAACAGCCTCCATGGCGGCATTC
AAGGCTTTGACAAACGAATGTGGGAAGGCAAGACATTTAAGAATGATAAG
GCTGTGGGCGTCATCTTCACGTTGCACAGCCCCGACGGCGACGAGGGCTA
TCCTGGCTTCGTGACGGTGCAGgtgcgcgggttgtgtggtgcgcatttca
ttgagtgtggcggtacgcgagtgtttgctcatgcagagcttatgtaggag
gggaggagtcgggataaatgtagcagctggtatttctcggtcagacctct
ttttcattcttcttgattgctaatacccattcccctccttctcaacataa
tcagGCAATCTACAGCATTCTGATCGACCAGGATGTCCTCGAGATGGATT
TTCGGGCCGAAACAGACGCGGCTACCCCCATAAACTTGAGTAACCACGCG
TACTGGAACCTCGGTGGGGAAGATGCAGGTGGTAAACACATCCGGAAGgt
acagtcggacccgcgcccgcaatgacggcatggcttttgaaagcgtatgg
gcacgcatgcgtggtctcacttgtacaagtgtcggccattttattgccgt
ctctactgctcgtatctcctcgcccgctctatccaccctcttgttctttc
ctcaaccagactctccctccatccctcctttccctcccccctcccccaca
gGCCCATGACCACTTCCTCCACGTAAACGCTTCACACATCCTGGAAGTAG
GACCTAACCAGATCCCGACTGGCGTGCTACAGCCCGTTGAGGGGACGCCC
TTCGACCTCCGTGATGGCTCAGGATCCCAACTGGGGAATCGCATTCCTCT
GATTGATGGAGGGGGCAAGCCCGGATTCGATCATTGTTACGTGATTGAGG
AGTATGACCCCGCGGCGTCACGGAGAGTGACGTCAACGAAGGGAGGCAAG
AAGGAGAAAGGGGAAAACGTGGACAAGAGGAAACAAGCTGAAGCGCAGGG
GGAGATGATGGAGGAGGAGGAGGAGAGGGAGGAAGGGAAGTCGATTCGGA
ATCAGGCTCGGTATATGGCTAGTCTTACGGAAAAGGAAAGTGGGAGGGTG
ATGCGTGTGTATGGGACGCAGCCGGGCTTGCAGATCTATACGGCAAATTG
GCTAAGTGAGGAGAAGGGAGAGCAGCACGGGGCGGTTTGTCTTGAGACAG
AGTTTTTCCCGAATGCGATAAATGATCCTACGGAGGGGGCGGCGGAGAGC
GTGGTTTTGCGGCCTGGGCAGGTGTACCGGCATTTTACCTACCATGTGTT
TCAAACAATCCCGAGAGAACGAGAGTGATAGTGAGGACGGCACGAACGAG
GTGCTGGGATGTACAGTGTACAAGGGGGGGAAAAGGATGGAGCATAACAA
GCTACGGAAAGCGAAATTTGGTAGACAGATAGATGA
back to top

protein sequence of NO01G04160.1

>NO01G04160.1-protein ID=NO01G04160.1-protein|Name=NO01G04160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MSQSTPPYAIKRISAGLSGPPDTAVHSFEVSNGSLSISMMDYGATLISVR
APDRDGKLDNVTLFSNKFGKNEMYMGVTVGRVANRVANGMFKLDGKDYTL
ATNNGPNSLHGGIQGFDKRMWEGKTFKNDKAVGVIFTLHSPDGDEGYPGF
VTVQAIYSILIDQDVLEMDFRAETDAATPINLSNHAYWNLGGEDAGGKHI
RKAHDHFLHVNASHILEVGPNQIPTGVLQPVEGTPFDLRDGSGSQLGNRI
PLIDGGGKPGFDHCYVIEEYDPAASRRVTSTKGGKKEKGENVDKRKQAEA
QGEMMEEEEEREEGKSIRNQARYMASLTEKESGRVMRVYGTQPGLQIYTA
NWLSEEKGEQHGAVCLETEFFPNAINDPTEGAAESVVLRPGQVYRHFTYH
VFQTIPRERE*
back to top
Synonyms
Publications