NO01G03710, NO01G03710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_059170977.1 (PrsW family intramembrane metalloprotease [Bacillus sp. FJAT-27445]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 64/197 (32.49%), Postives = 99/197 (50.25%), Query Frame = 0 Query: 152 LGLFLLSVLPAMTLLSF------LETQFRKSVIRMQMLISFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRIINKSYVVD-PRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDTERW-YKTLILPVLIHGTYDF 341 LG+F + P + LLS+ +ET+ VIR +F L + PI+ L+++ L LP +LQAYL +GLFEE VK+ + + + D P +VY F TVE++ Y + G+ I RA VP H G+I+G L + KF ++ T +W + +LI+PV +HG+YD+ Sbjct: 2 LGIFSAGIAPGLALLSYFYLKDEVETEPLPVVIR-----TFLFGALLVFPIMFLQHV----LEAENILP----------PGWLQAYLSSGLFEEFVKWFVLYYAVYQHIAFDEPFDGIVYGAAVSLGFATVENIFYLVGNGVEYAIGRALLPVPSHALFGVIMGYYLGKSKFSQKRTAKWMWLSLIIPVFLHGSYDY 179
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_045473648.1 (PrsW family intramembrane metalloprotease [Winogradskyella sp. PG-2] >BAO77007.1 hypothetical protein WPG_2777 [Winogradskyella sp. PG-2]) HSP 1 Score: 82.8 bits (203), Expect = 2.500e-12 Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 0 Query: 152 LGLFLLSVLPAMTLLSFL--ETQFRKSVIRMQMLISFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRIIN-KSYVVDPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDTERWYKTLILPVLIHGTYDFASFV 345 + L L+++ P M ++ ++ + ++ K I + + F A++ ++ + IL T F+ + + I F+QA+++ L EE KY+ V+ K +P ++Y+ F E++MY + G GT I+RAFT+VP H G+++G + + KF + + L L VL HG YDF F+ Sbjct: 1 MNLLLMAIAPIMVIIVYIYFQDKYEKEPIGLLLTSFLFGAIVSIIIVTILYLFTGRFIPITNEFN--------IWQQFIQAFIVVALAEEFSKYIIVKYFNQPKKAFNEPYDGIIYAVMVSMGFACTENIMYVMEGGYGTAILRAFTAVPAHATFGILMGYFMGKAKFSKNRFKLNMAGLFLAVLFHGAYDFFLFI 188
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_014219252.1 (PrsW family intramembrane metalloprotease [Niastella koreensis] >AEV99338.1 hypothetical protein Niako_3008 [Niastella koreensis GR20-10] >OQP45195.1 hypothetical protein A4D02_34045 [Niastella koreensis]) HSP 1 Score: 82.4 bits (202), Expect = 3.300e-12 Identity = 64/219 (29.22%), Postives = 108/219 (49.32%), Query Frame = 0 Query: 152 LGLFLLSVLP--AMTLLSFLETQFRKSVIRMQMLISFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRIINKSYVV-DPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDT-ERWYKTLILPVLIHGTYDFASFVLASGNLGTWHAEEKYSRNVPAL 367 L L L+V P A+T+ + ++ + ++ +LISF ++ P ++++ L L R P I FL A++I EE KYL +R ++ +P ++YS F T+E++ Y L+YG TG++R F SVP H A ++IG + KF + + K ++L ++ HG +DF F+L G+ H +KY N P + Sbjct: 2 LSLLALAVAPGAAITIYIYSRDKYDREPLK-PLLISFLLGMVATAPAILIQTLLKPVLFTRFPNPDSD-----ITYYFLLAFIIVACSEEGSKYLMLRYYAYRNEAFNEPFDGIIYSVMISMGFATLENIGYVLNYGFKTGLIRMFVSVPSHAAFAVLIGYHVGLAKFDAPNAIKHIVKGILLAIVFHGAFDF--FLLLQGS----HQAKKYVSNWPLI 208
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_089942438.1 (protease PrsW [Lachnospiraceae bacterium NK3A20] >SEA02395.1 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Lachnospiraceae bacterium NK3A20]) HSP 1 Score: 82.0 bits (201), Expect = 4.300e-12 Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 0 Query: 223 ILSAFLQAYLIAGLFEESVKYLAVRRII----NKSYVVDPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDTERWYK-------TLILPVLIHGTYDFAS 343 ++ ++ +++ G+ EE +K+LA+RRI +Y D VVYS F E++MY ++GLG +RA T++P+HC G+ +G E K E E W K +LI+P+L+HG YDFA+ Sbjct: 68 LIFLLVENFIVVGIAEEGMKHLALRRISWYRPEFNYRFD---AVVYSTAVALGFAAFENVMYIFNFGLGVAPIRAITAIPMHCICGIFMGHYYGEAKLCEMRHE-WSKMNYYQAMSLIIPILLHGFYDFAA 194
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_038558359.1 (PrsW family intramembrane metalloprotease [Draconibacterium orientale] >AHW59995.1 peptidase [Draconibacterium orientale] >SET38911.1 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Draconibacterium orientale]) HSP 1 Score: 81.3 bits (199), Expect = 7.400e-12 Identity = 58/196 (29.59%), Postives = 102/196 (52.04%), Query Frame = 0 Query: 152 LGLFLLSVLPAMTLLSFL--ETQFRKSVIRMQMLISFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRIINKSYVVDPR-ALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDTERW-YKTLILPVLIHGTYDFASF 344 + L +LS+ P + + +++ ++ K +R+ +L + L ++PI+ LE + F ++ L +A +A+ +A EE KYLA+ +I KS + + +VY+ F VE+++Y + GL TGI+RA T+VP H G+ +G KF+E+ + K L+ P+L+HG YDF F Sbjct: 1 MNLLVLSLAPVVVIAAYIYFRDKYEKEPLRL-LLFALLVGGLTVIPILFLERFLDRFTVLFPWL----------FAAAWKAFAVAAFSEELFKYLALYLLIWKSPEFNEKFDGIVYAVYVSLGFAAVENILYVMDGGLSTGIMRAITAVPAHAIFGITMGFYFGLAKFYEKQRQSLKQKALLFPILLHGIYDFILF 185
BLAST of NO01G03710 vs. NCBI_GenBank
Match: KGE88851.1 (hypothetical protein IX84_06930 [Phaeodactylibacter xiamenensis]) HSP 1 Score: 81.3 bits (199), Expect = 7.400e-12 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 220 GMCILSAFLQAYLIAGLFEESVKYLAVRRIINKS-YVVDPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQD----TERWYKTLILPVLIHGTYDF 341 G +L ++++ L EE VKYL + +S + +P +VY+ G F T+E+LMY L YGL T I+RAFT+VP H A +I+G + K FE D +R L P++IHG YDF Sbjct: 61 GEGVLFTLFSSFIVVALTEELVKYLCLFLYPYRSRFFNEPMDGIVYAVMIGMGFATLENLMYALQYGLETVILRAFTAVPAHAAFAIIMGYYFGKAK-FEPDPKIRRKRLLMALFAPLVIHGLYDF 185
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_052515830.1 (PrsW family intramembrane metalloprotease [Phaeodactylibacter xiamenensis]) HSP 1 Score: 81.3 bits (199), Expect = 7.400e-12 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 220 GMCILSAFLQAYLIAGLFEESVKYLAVRRIINKS-YVVDPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQD----TERWYKTLILPVLIHGTYDF 341 G +L ++++ L EE VKYL + +S + +P +VY+ G F T+E+LMY L YGL T I+RAFT+VP H A +I+G + K FE D +R L P++IHG YDF Sbjct: 66 GEGVLFTLFSSFIVVALTEELVKYLCLFLYPYRSRFFNEPMDGIVYAVMIGMGFATLENLMYALQYGLETVILRAFTAVPAHAAFAIIMGYYFGKAK-FEPDPKIRRKRLLMALFAPLVIHGLYDF 190
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_057899326.1 (MULTISPECIES: PrsW family intramembrane metalloprotease [Aneurinibacillus] >AMA73599.1 hypothetical protein ACH33_12520 [Aneurinibacillus sp. XH2] >SDG84302.1 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Aneurinibacillus thermoaerophilus]) HSP 1 Score: 80.9 bits (198), Expect = 9.600e-12 Identity = 56/200 (28.00%), Postives = 94/200 (47.00%), Query Frame = 0 Query: 158 SVLPAMTLLSFLETQFRKSVIRMQMLI-SFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRIINKSYVVD-PRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDTERWY--KTLILPVLIHGTYDFASFVLASGNLGTW 354 ++ P + +LS+ + + + M++ SF +L + P+++++ G+ L F QAY AG EE K+ + + K D P +VYS F T+E+ Y LS+G+ T RA V H G+++G L + KF +RW+ +L +PVL+HGTYDF ++ G + W Sbjct: 8 ALAPGIAILSYFYLKDKYETEPLHMVVKSFIMGILLVFPVMVVQ---------------FGFQEELHLGVFAQAYFSAGFLEEFFKWFIIYYTVYKHVEFDEPYDGIVYSVAVSLGFATLENFFYLLSHGVSTAFYRALLPVSSHGLFGVLMGYYLGKAKFSPASKQRWFLVLSLFIPVLLHGTYDF--ILMVGGTVWPW 190
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_069894273.1 (PrsW family intramembrane metalloprotease [Candidatus Marispirochaeta associata]) HSP 1 Score: 80.9 bits (198), Expect = 9.600e-12 Identity = 62/211 (29.38%), Postives = 110/211 (52.13%), Query Frame = 0 Query: 147 RLLPELGLFLLSVLPAMTL-LSFLETQFRKSVIRMQMLISFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRII-NKSYVVDPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKF---FEQDTERWYKTLILPVLIHGTYDFASFVLASGNLGT 353 +LLP +++V+P++ L L F+ + R ++L +F + +P +LE +T+ FL P + A ++A+++A L EE +K + VR+ I +S+ + ++Y+ AG F +E+++Y S G+ + RAFT+VPLH ++G ++ F E++ ++ L L VLIHG YDF FV+ GT Sbjct: 2 QLLP----LVMAVVPSVVLVLYFMHLDRARPEPRGEVLRAFLLGIFSTLPAFVLELVTDAFLRPWFINP--------VRFALVEAFIVAALCEEGIKLVVVRQFIYRRSHFDEVMDGILYTVAAGLGFACLENILYVASGGMAVALTRAFTAVPLHTICSALLGYAIGMAHFADTAEREDTLIFRGLFLAVLIHGAYDFLLFVVPYWGSGT 200
BLAST of NO01G03710 vs. NCBI_GenBank
Match: WP_105046081.1 (protease PrsW [Polaribacter gangjinensis] >PQJ74936.1 protease PrsW [Polaribacter gangjinensis]) HSP 1 Score: 80.1 bits (196), Expect = 1.600e-11 Identity = 54/196 (27.55%), Postives = 96/196 (48.98%), Query Frame = 0 Query: 152 LGLFLLSVLPAMTLLSFL--ETQFRKSVIRMQMLISFFEAVLWMVPIVILENLTNYFLIVRTKLPKEGYCGMCILSAFLQAYLIAGLFEESVKYLAVRRIINK-SYVVDPRALVVYSCCAGSAFGTVEDLMYNLSYGLGTGIVRAFTSVPLHCATGLIIGTSLAERKFFEQDTERWYKTLILPVLIHGTYDFASFV 345 + L LL++ PAM ++ ++ + +F K +R A++ +V +IL + N+ + I F+ A+ + GL EE KY+ V+ K S +P +VY+ F +E+++Y +G TGI+RAFT+VP H G+++G + KF + + L++ HG+YDF F+ Sbjct: 1 MSLLLLAIAPAMIIILYIYFKDKFEKEPVRFLFKNFLMGAIVSVVITLILSAVANHIYPLTDT--------TSIYQQFINAFFLVGLVEEFSKYIIVKYYAQKNSEFNEPFDGIVYAVMVSMGFAALENILYVFEHGAATGILRAFTAVPAHATFGILMGYFMGLAKFSKNKQLLNFTGLVVATFFHGSYDFFLFI 188 The following BLAST results are available for this feature:
BLAST of NO01G03710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03710 ID=NO01G03710|Name=NO01G03710|organism=Nannochloropsis oceanica|type=gene|length=2797bpback to top protein sequence of NO01G03710.1 >NO01G03710.1-protein ID=NO01G03710.1-protein|Name=NO01G03710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bpback to top protein sequence of NO01G03710.2 >NO01G03710.2-protein ID=NO01G03710.2-protein|Name=NO01G03710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=383bpback to top protein sequence of NO01G03710.3 >NO01G03710.3-protein ID=NO01G03710.3-protein|Name=NO01G03710.3|organism=Nannochloropsis oceanica|type=polypeptide|length=383bpback to top Synonyms
Publications
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