NO01G03590, NO01G03590 (gene) Nannochloropsis oceanica

Overview
NameNO01G03590
Unique NameNO01G03590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2791
Alignment locationchr1:950880..953670 -

Link to JBrowse

Properties
Property NameValue
DescriptionGc-rich sequence dna-binding factor 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:950880..953670 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012890GCFC
IPR022783GCFC_dom
Homology
BLAST of NO01G03590 vs. NCBI_GenBank
Match: EWM29276.1 (gc-rich sequence dna-binding factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 370.9 bits (951), Expect = 9.000e-99
Identity = 251/626 (40.10%), Postives = 307/626 (49.04%), Query Frame = 0
Query:  130 EYSKEKLAELKKGQLFQVSTKAARETERSTRVTFELPEGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVPGEXXXXXEG--FIPLDGSRRSVPMEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSRLALPSSFFPGSSPRFKTVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQ--MLLSLQGYMPTVV----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPL-------EGGRDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPGKHALEMLLRAPLTRIEEAITQVCLPLLKME 717
            EYSKEKLAELKK Q FQVS KA+R TE   RV FE+PE                                             G      EG  FI L+ S     M                                                                              +SLS +ALPS     S   FK+V  VL D++S + R+E++H RN R  E++R+E+  + +GL KMQ EF  TA RF+YFQDVR +LSSLCGCLREK+ M+ ELE AMAQ+ + G +RR++ RV+DQEDAL              Q  MLLSLQGY P VV                                                         GD  EAEAT SGAEE + EVE   +RQAKLLEAA +IFED ADEF++LD V  RFE+WK+K+PKDY TAYVP+AL QV EPYVR+EMV WNPL       +G   GG + GG A+E F WFERLF                     +RLVP +VEKV V +L+ +L +CYDP S +ETQRA++A+QGLLIYEPGKHALE LLRAP +R+E+AIT++CLPLL  E
Sbjct:  105 EYSKEKLAELKKVQNFQVSIKASRTTEAKARVAFEVPEDTDGEKEDAEGVDTEDYDVHSAQLEQLKKGKRRRGMLG------SGNGLGAEEGMDFISLEASGEGGTMS------------------WSGKGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDS--EFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLF-EYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPE 703          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: EWM29277.1 (gc-rich sequence dna-binding factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 370.9 bits (951), Expect = 9.000e-99
Identity = 215/441 (48.75%), Postives = 268/441 (60.77%), Query Frame = 0
Query:  313 SSLSRLALPSSFFPGSSPRFKTVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQ--MLLSLQGYMPTVV----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPL-------EGGRDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPGKHALEMLLRAPLTRIEEAITQVCLPLLKME 717
            +SLS +ALPS     S   FK+V  VL D++S + R+E++H RN R  E++R+E+  + +GL KMQ EF  TA RF+YFQDVR +LSSLCGCLREK+ M+ ELE AMAQ+ + G +RR++ RV+DQEDAL              Q  MLLSLQGY P VV                                                         GD  EAEAT SGAEE + EVE   +RQAKLLEAA +IFED ADEF++LD V  RFE+WK+K+PKDY TAYVP+AL QV EPYVR+EMV WNPL       +G   GG + GG A+E F WFERLF                     +RLVP +VEKV V +L+ +L +CYDP S +ETQRA++A+QGLLIYEPGKHALE LLRAP +R+E+AIT++CLPLL  E
Sbjct:   76 ASLSSMALPSKGLKDS--EFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLF-EYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPE 513          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: CBN76452.1 (gc-rich sequence DNA-binding factor, putative [Ectocarpus siliculosus])

HSP 1 Score: 136.7 bits (343), Expect = 2.900e-28
Identity = 143/471 (30.36%), Postives = 209/471 (44.37%), Query Frame = 0
Query:  327 GSSPRFKTVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGYM---PTV------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQA--------------------KLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGGRDG------------------------------------------------GGEQGGE-------ALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPGKHALEMLLRAPLTRIEEAITQVCLPLL 714
            G  PRF  +  +   L+    ++ + H RNER  +   +EL        K+ ++ +E A RF +FQ  R  LS LCG LREK+ M+ E+E A   +     +R + VR++DQED +             G       G +   P V       XXXXXXXXXXXXXXXXXXXXXXXXX    G   E E  +        + E +   QA                     +LEAA ++ ED  D  +S+  V   FEEWK+++ + YA AY  + +  +  P+VR+E+VRWNPL G  DG                                                GG++  E       ALE F W+ RLF                     + LVP +VEKV +  + + L   YD +S ++T   V+AV  +L+Y+P + +L+ LL + +  ++ A+  VC+PL+
Sbjct:  337 GERPRFLGIDEMQKALREAGTQLRETHERNERQLQVLVSELATQVAEEKKLSSQEKEAAERFGFFQQTRNALSDLCGMLREKEDMLSEVEAAKRLLHTRRLERVVQVRLQDQEDEILDARDAGVIVSGLGPYRACPGGPLSKAPRVGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGGVREGEGWVGSKSFPWGKKERTEVWQALGSEXXXXXXXXXXXXXXXXXVLEAAEMVMEDVDDSVKSVSTVKALFEEWKRQHGEQYAQAYCTLTIPDLLAPFVRLELVRWNPLTGNVDGVDGVGARNSRDNSKGRKPAAVGVENDSKGPPNEEQIEEEEVGFKPPGAGGDETDEGEDDLEGALERFEWYRRLFDFSGDIPPPDSAGYGADEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPTEESLKTLLGSAMRALQAAVQNVCVPLI 807          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: XP_018420513.1 (PREDICTED: PAX3- and PAX7-binding protein 1 [Nanorana parkeri])

HSP 1 Score: 119.0 bits (297), Expect = 6.200e-23
Identity = 114/395 (28.86%), Postives = 174/395 (44.05%), Query Frame = 0
Query:  334 TVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGYMPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGGRDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLL-----IYEPGKHALEMLLRAPLTRIEEAI-TQVCLPLLKMEGVVEEN 723
            T+  V   LK     +E+ H  N    E+     Q  N  + +++    + A R+Q+ Q++R Y+  L  C REK  +I ELE AM Q+ K    +R A  V+ ++D +            K  M  +L  +    V               XXXXXXXXXXXXXX      E   S  EE   ++   +    ++L+ ++ +FEDT + F S+D +  +FE W+ KY   Y  AY+ + L ++  P VR++++ WNPLE              E   WFE L                        L+P +VEKV++ KL  I E  +DP S  +T R  A +Q L+     +   G    E LL+A L R+   +   V +PL     +  +N
Sbjct:  339 TIDLVKNQLKDRLRAMEETHKGNLEMYEKHEQSRQDSNNSISRLEGCSGDNAERYQFLQEMRGYVQDLLECFREKVPLITELETAMHQLFK----QRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDSFGRDRVSYQEHAKQRRIAEREXXXXXXXXXXXXXXXXXEHLEGLSSDDEETSTDITNFNMENDRILKESSKVFEDTLENFYSIDCIKEQFETWRCKYYSSYKDAYIGLCLPKLLCPLVRLQVLTWNPLEPKCCD--------FESMMWFECLL------FYGCDVEEADKEDADVALLPSLVEKVILPKLTGIAESVWDPFSNTQTNRLAAVMQKLINGYPSVVNSGNKNTEALLKALLMRMRRTLDDDVFMPLYPKNVIENKN 715          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: XP_022785527.1 (PAX3- and PAX7-binding protein 1-like [Stylophora pistillata])

HSP 1 Score: 116.3 bits (290), Expect = 4.000e-22
Identity = 117/388 (30.15%), Postives = 191/388 (49.23%), Query Frame = 0
Query:  334 TVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGYMPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELS----HSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGGRDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPGKHA----LEMLLRAPLTRIEEAIT-QVCLPL 713
            TV  +   +K     +++ H ++   CE++ ++L+     + K++ +     +RF +FQ++R Y+  L  CL  K   I+ELE +M  + K      +  R  D  D              + +  L+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++  +    G   D+ E+E       +   ++L     IFED  ++F S+D + +RFEEWK K+   Y  AY+ + L ++F P++R++++ WNP EG            +E F W++ L                       +L+P+++EK V+ KL  + E  +DP+S K+T  A+  ++G+    P  HA     + L  A  TR+   ++  V +PL
Sbjct:  362 TVDMICDKMKQQLATLQEVHRQHIMDCEKASSQLETAQCNIKKLERQGRNAEQRFSFFQEMRGYVRDLIECLNNKVPAIDELERSMHALLKNRASLVVQRRRTDVND--------------QAEDFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVPDTHHEGQSTDDEEIEADAVKFRAETKRILSEEKAIFEDVVEDFSSIDSLKSRFEEWKNKHEDCYKNAYISLCLPKLFAPFIRLQLLDWNPFEG--------KCLEIEDFRWYKSLVLFGCGDDPYDIDADDLDI----KLIPMVLEKAVIPKLTGLFEHVWDPLSQKQTMLAIKLIRGMAEVYPNFHAQDKSTQSLFAAITTRLRRCVSDDVFVPL 723          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: PFX28718.1 (PAX3- and PAX7-binding protein 1 [Stylophora pistillata])

HSP 1 Score: 115.2 bits (287), Expect = 8.900e-22
Identity = 110/360 (30.56%), Postives = 179/360 (49.72%), Query Frame = 0
Query:  334 TVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGYMPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELS----HSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGGRDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPGKHA 690
            TV  +   +K     +++ H ++   CE++ ++L+     + K++ +     +RF +FQ++R Y+  L  CL  K   I+ELE +M  + K      +  R  D  D              + +  L+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++  +    G   D+ E+E       +   ++L     IFED  ++F S+D + +RFEEWK K+   Y  AY+ + L ++F P++R++++ WNP EG            +E F W++ L                       +L+P+++EK V+ KL  + E  +DP+S K+T  A+  ++G+    P  HA
Sbjct:  359 TVDMICDKMKQQLATLQEVHRQHIMDCEKASSQLETAQCNIKKLERQGRNAEQRFSFFQEMRGYVRDLIECLNNKVPAIDELERSMHALLKNRASLVVQRRRTDVND--------------QAEDFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVPDTHHEGQSTDDEEIEADAVKFRAETKRILSEEKAIFEDVVEDFSSIDSLKSRFEEWKNKHEDCYKNAYISLCLPKLFAPFIRLQLLDWNPFEG--------KCLEIEDFRWYKSLVLFGCGDDPYDIDADDLDI----KLIPMVLEKAVIPKLTGLFEHVWDPLSQKQTMLAIKLIRGMAEVYPNFHA 692          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: XP_005847902.1 (hypothetical protein CHLNCDRAFT_57717 [Chlorella variabilis] >EFN55800.1 hypothetical protein CHLNCDRAFT_57717 [Chlorella variabilis])

HSP 1 Score: 113.2 bits (282), Expect = 3.400e-21
Identity = 113/417 (27.10%), Postives = 183/417 (43.88%), Query Frame = 0
Query:  336 AAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQV---RKGGRDRRIAVRVEDQED-----------------------------------ALXXXXXXXXXXXXKGQMLLSLQGYMPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSH--SRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGGRDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPG-KHALEMLLRAPLTRIEEAITQVCLP 712
            A VL  L++   R++ +  + ++  E++ N LQ     + +M+ E E  + ++   Q ++ Y++ LC  L++K  ++EELE+A+ ++   R    +RR A    +                                       L               M    +  +                 XX  XXXXXXXXXXXX  +  AE        +E E E+SH   RQ ++ EAA  +F D  DEF SL  V  R EEWK + P  Y  AYV ++   +F P+VR+E+++W PL GG  G   Q         W+++LF                       LVP +V+K+V+   +Q+L   + P S +++Q A A +  LL+Y P  +  L+ ++RA   ++EEA+  + LP
Sbjct:  372 AEVLKTLQAGLQRLQMSRKQADKNLERTSNSLQSSLAAITRMEGELEAASSKYVLVQGLKAYVADLCNMLQDKSPLVEELEDALLELCEGRAAAMERRRAAGDAEAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGLDLPVELDEFGRDMNAEKKAELADSACRLVTICRAKQRRXXLEXXXXXXXXXXXXXXSAPAEPRFGEDTSEESEGEVSHFRVRQGEVQEAADAVFRDADDEFGSLAAVKRRLEEWKARQPGAYRDAYVSLSAPALFAPFVRLELLKWRPLHGGDAGFDSQ--------QWYQQLF----DYGMPQDPSDLDPTDPDANLVPQLVQKLVLPLARQLLAGVWSPYSRRQSQAAAAMLADLLVYVPAEQEELQEVVRAVQAKLEEAVGGLALP 776          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: XP_005524053.1 (PREDICTED: PAX3- and PAX7-binding protein 1 [Pseudopodoces humilis])

HSP 1 Score: 110.9 bits (276), Expect = 1.700e-20
Identity = 115/401 (28.68%), Postives = 186/401 (46.38%), Query Frame = 0
Query:  334 TVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGY-MPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGG-RDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLL-----IYEPGKHALEMLLRAPLTRIEEAI-TQVCLPLLKMEGVVEENEERG 727
            T+  V   LK     +++ H  N +  E+ +   +   + + +++        R+++ Q++R Y+  L  C  EK  +I ELE AM Q+ K    +R +  V+ ++D +            K  M  +L  +    V+           XXXXXXXXXXXXXXXXX  D    E   S  EE   ++   +  + ++L+ ++ +FED  + F S+D + ++FE W+ KY   Y  AY+ + L ++F P +R++++ W PLEG  RD          E   WFE L                        L+P +VE+VV+ KL  I E+ +DP S  +T R VA VQ L+     +        +MLL+A L R+   +   V +PL      + EN+  G
Sbjct:  427 TIDLVKKQLKDRLDSMKEIHKANRQQYEKHQQSQEDSTKAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAMHQLYK----QRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRVIYQEQVKRRTAEXXXXXXXXXXXXXXXXXMAD--HLEGLSSDDEETSTDITNFNLERDRILKESSKVFEDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLFNPLIRLQLLTWTPLEGKCRD---------FETMLWFESLLFYGCEEQEQVKDDADI------SLLPTIVERVVLPKLTVISENIWDPFSTTQTSRMVAIVQKLIDGYPSVVNAENKNTQMLLKALLLRMRRTLDDDVFMPLYPKN--ILENKNSG 804          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: KFW95894.1 (PAX3- and PAX7-binding protein 1, partial [Phalacrocorax carbo])

HSP 1 Score: 110.9 bits (276), Expect = 1.700e-20
Identity = 115/401 (28.68%), Postives = 187/401 (46.63%), Query Frame = 0
Query:  334 TVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGY-MPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGG-RDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLL-----IYEPGKHALEMLLRAPLTRIEEAI-TQVCLPLLKMEGVVEENEERG 727
            T+  V   LK     +++ H  N +  E+ +   +   + + +++        ++++ Q++R Y+  L  C  EK  +I ELE AM Q+ K    +R +  V+ ++D +            K  M  +L+ +    V+           XXXXXXXXXXXXXXXXX  D    E   S  EE   ++   +  + ++L+ ++ +FED  + F S+D + ++FE W+ KY   Y  AY+ + L ++F P +R++++ W PLEG  RD          E   WFE L                        L+P +VE+VV+ KL  I E+ +DP S  +T R VA VQ L+     +        EMLL+A L R+   +   V +PL      + EN+  G
Sbjct:  275 TIDLVKKQLKDRLDSMKELHKANRQQYEKHQQSREDSTKAIERLEGSSGGIGEQYKFLQEMRGYVQDLLECFSEKVPLINELESAMHQLYK----QRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLESFGRDRVIYQEQVKRRTAEXXXXXXXXXXXXXXXXXMAD--HLEGLSSDDEETSTDITNFNMERDRILKESSKVFEDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLFNPLIRLQLLIWTPLEGKCRD---------FETMLWFESLLFYGCEEQEQVKDDADI------SLLPTIVERVVLPKLTVISENIWDPFSTTQTSRMVAIVQKLIDGYPSVVNAENKNTEMLLKALLLRMRRTLDDDVFMPLYPKN--ILENKNSG 652          
BLAST of NO01G03590 vs. NCBI_GenBank
Match: XP_009512160.1 (PREDICTED: PAX3- and PAX7-binding protein 1, partial [Phalacrocorax carbo])

HSP 1 Score: 110.9 bits (276), Expect = 1.700e-20
Identity = 115/401 (28.68%), Postives = 187/401 (46.63%), Query Frame = 0
Query:  334 TVAAVLTDLKSTKVRVEDAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSSLCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALXXXXXXXXXXXXKGQMLLSLQGY-MPTVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPVATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGG-RDGGGEQGGEALEGFAWFERLFAXXXXXXXXXXXXXXXXXXXXERLVPVMVEKVVVGKLQQILEDCYDPVSGKETQRAVAAVQGLL-----IYEPGKHALEMLLRAPLTRIEEAI-TQVCLPLLKMEGVVEENEERG 727
            T+  V   LK     +++ H  N +  E+ +   +   + + +++        ++++ Q++R Y+  L  C  EK  +I ELE AM Q+ K    +R +  V+ ++D +            K  M  +L+ +    V+           XXXXXXXXXXXXXXXXX  D    E   S  EE   ++   +  + ++L+ ++ +FED  + F S+D + ++FE W+ KY   Y  AY+ + L ++F P +R++++ W PLEG  RD          E   WFE L                        L+P +VE+VV+ KL  I E+ +DP S  +T R VA VQ L+     +        EMLL+A L R+   +   V +PL      + EN+  G
Sbjct:  272 TIDLVKKQLKDRLDSMKELHKANRQQYEKHQQSREDSTKAIERLEGSSGGIGEQYKFLQEMRGYVQDLLECFSEKVPLINELESAMHQLYK----QRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLESFGRDRVIYQEQVKRRTAEXXXXXXXXXXXXXXXXXMAD--HLEGLSSDDEETSTDITNFNMERDRILKESSKVFEDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLFNPLIRLQLLIWTPLEGKCRD---------FETMLWFESLLFYGCEEQEQVKDDADI------SLLPTIVERVVLPKLTVISENIWDPFSTTQTSRMVAIVQKLIDGYPSVVNAENKNTEMLLKALLLRMRRTLDDDVFMPLYPKN--ILENKNSG 649          
The following BLAST results are available for this feature:
BLAST of NO01G03590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29276.19.000e-9940.10gc-rich sequence dna-binding factor 1 [Nannochloro... [more]
EWM29277.19.000e-9948.75gc-rich sequence dna-binding factor 1 [Nannochloro... [more]
CBN76452.12.900e-2830.36gc-rich sequence DNA-binding factor, putative [Ect... [more]
XP_018420513.16.200e-2328.86PREDICTED: PAX3- and PAX7-binding protein 1 [Nanor... [more]
XP_022785527.14.000e-2230.15PAX3- and PAX7-binding protein 1-like [Stylophora ... [more]
PFX28718.18.900e-2230.56PAX3- and PAX7-binding protein 1 [Stylophora pisti... [more]
XP_005847902.13.400e-2127.10hypothetical protein CHLNCDRAFT_57717 [Chlorella v... [more]
XP_005524053.11.700e-2028.68PREDICTED: PAX3- and PAX7-binding protein 1 [Pseud... [more]
KFW95894.11.700e-2028.68PAX3- and PAX7-binding protein 1, partial [Phalacr... [more]
XP_009512160.11.700e-2028.68PREDICTED: PAX3- and PAX7-binding protein 1, parti... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007947NSK007947Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03590.1NO01G03590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|237893gene_362Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g40gene1337Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03590.1NO01G03590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03590 ID=NO01G03590|Name=NO01G03590|organism=Nannochloropsis oceanica|type=gene|length=2791bp
ATGAGCTTTAAGACCAAAAAGTTCCGGAGCCGCACAACCGCAGTGTCGTC
TTCAGAAGAAGATGAAGATGCAGAGGCACGACGGACGGCCGCAGCAGTGC
CTAAAAGCAAGCCAAAGAAGAAGGAAGAAGCTGCGGCAGCTTCCTCTGCC
CCTGTCCCCTCCTCCAAAAAGCCAGCCGCAGCCCTCCTTAGTTTTGACGA
CGACGACGACGAGATGGAGGATGGCGGAATATTACAGGCTTTGAAAAGCA
AAAAGAAGAAGAATAAGGCGCTGTCGTCTAGCAAGAAGTCCTTGCGGAAA
GCGCTGGAGCAGCACTTAGATGAACGTGCAGCCGAGGCCGGTATTGGCGC
TGGTGTTGGTGGTGGTAGTGGAGAAGGAGGAGGGGGCGAATACAGCAAAG
AGAAGCTTGCGGAATTGAAGAAGGGACAGCTTTTCCAAGTGAGCACTAAA
GCGGCAAGAGAGACGGAGAGGAGCACACGGGTGACGTTTGAGCTGCCAGA
AGGAGTAGTGGAGGAGGGGGAGGAACAAGAGGACGAAACCGAAGTAGAGC
AAGGAGGGGTACTGGACAAAGCGGAGATTGACCGGTTAAAGAAAGAGAAA
TTGAAAAAGCAGGCATTGAGGGCGAGGCACGTGCCGGGCGAGGAGGAGGA
GGAGGAGGAGGGCTTCATACCATTGGATGGGAGTCGGAGATCAGTGCCGA
TGGAGGGGAAGAATAATGAGgtaagaaagagaaatggtgagagcaataag
ggagaaatagagaacatgtgatgattgattacacaaggaaagttgtgttg
catagataagtgcactgcgggaagaggaggaggaggatgaagaagggtgt
cattggtattgctgcatgattacaacatttcatgagatagcggacgagtg
cgcatcacaattgttcaaatcggcgtgcttcgcatggcgtctagagattt
ctgcctgacagcaaaaatgcaatgacaccctttccaactcggtacttcct
cccatcgtttcccattttccctttcttcttatccacactcaacttatcta
tatgtacacatacgtttacatacaaacagGAAGAGAAAGGAGCAGCAGCC
TTAGCAGCAGTCGCTGGGCCCGTGGACCCAGCTATTGACGATGACTGGGA
GAGCGAGATGATCCGCCGGGGGGCGCGCAACAGCAAAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGAGGGGAATGGCGGGTACTTGTCGTCGTC
GTTGAGgtaggctagcaggagggttgaaggagataagacaagaggagggg
agggagataggcgatgaggctcatgtttttttattcaatcgttgacacga
ccatacgcctcctccttcctcccttaccacgcaccctccagCCGCTTAGC
CCTGCCCTCCTCTTTTTTCCCCGGCAGCTCCCCTCGGTTCAAAACTGTAG
CCGCTGTGCTCACCGATCTGAAATCAACCAAAGTTCGAGTCGAAGACGCC
CACAGCCGAAACGAGCGTTTCTGCGAACAATCCCGAAACGAGCTGCAGGG
TATCAATGAGGGCCTTGGGAAGATGCAAGCAGAATTTGAGGAGACAGCCA
GGAGGTTTCAATATTTCCAGGACGTACGGGAGTACTTATCAAGTTTGTGT
GGGTGCCTTAGGGAGAAAAAAGGAATGATCGAGGAGCTGGAGGAGGCCAT
GGCGCAGGTGAGGAAGGGGGGAAGGGATCGAAGGATAGCGGTGAGGGTGG
AGGATCAAGAGGATGCCCTGGAGGAAGTTTTGGAGAAGGAGAGGGAGGGA
GGGAGGAAGGGGCAGATGTTGCTGTCGTTGCAGGGATATATGCCGACGGT
TGTGAAAACgttggcgggaggaggagatgggggggggagaagggaggacc
gctggacgatattgggagggacgtgagcggggatttggacagAACGAGAC
GGAGGAAGCATCGGAGGAAACGACAAGAGCTGGCCTTGCGGAAGCTCATC
GGCAACAGCAGCAGCAGCAATACTGGTGATACAACGGAAGCAGAAGCGAC
TTTGAGTGGAGCTGAGGAGGATGAAAGAGAAGTCGAGCTCTCTCATTCAC
GGCAAGCAAAGCTTTTGGAGGCTGCTGCTATAATCTTTGAGGATACCGCG
GACGAATTTCGGTCGTTGGATCCCGTGGCTACTCGATTTGAAGAATGGAA
GAAGAAGTATCCGAAGGATTATGCGACCGCATACGTGCCGGTTGCCTTGT
CTCAAGTGTTCGAACCCTATGTAAGAATGGAGATGGTCAGGTGGAATCCC
TTAGAGGGAGGGAGGGACGGAGGGGGGGAGCAAGGGGGGGAGGCTTTGGA
GGGGTTTGCGTGGTTTGAACGGTTGTTTGCGTATGGGCAGGGAGAGGGCG
AGGGAGGTAGCGAAGGAGAGGGCGAGAGAGAAGATGCGGATGAGCGGTTA
GTGCCTGTAATGGTGGAGAAGGTGGTGGTGGGTAAGTTGCAGCAAATATT
GGAAGATTGTTATGATCCTGTGTCGGGGAAGGAGACGCAGAGAGCAGTGG
CTGCGGTGCAGGGGTTGTTGATATATGAGCCGGGAAAACATGCGTTGGAA
ATGTTGCTGCGAGCGCCGTTGACAAGGATTGAGGAAGCGATCACTCAGGT
GTGTTTGCCGCTGTTGAAGATGGAGGGGGTTGTGGAGGAAAATGAGGAAA
GGGGGGAGGGATGGATTACCAGCGACGACAGTTGTTTGTAG
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protein sequence of NO01G03590.1

>NO01G03590.1-protein ID=NO01G03590.1-protein|Name=NO01G03590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=738bp
MSFKTKKFRSRTTAVSSSEEDEDAEARRTAAAVPKSKPKKKEEAAAASSA
PVPSSKKPAAALLSFDDDDDEMEDGGILQALKSKKKKNKALSSSKKSLRK
ALEQHLDERAAEAGIGAGVGGGSGEGGGGEYSKEKLAELKKGQLFQVSTK
AARETERSTRVTFELPEGVVEEGEEQEDETEVEQGGVLDKAEIDRLKKEK
LKKQALRARHVPGEEEEEEEGFIPLDGSRRSVPMEGKNNEEEKGAAALAA
VAGPVDPAIDDDWESEMIRRGARNSKGGGGGGGGGGGGGGGGGGGGGGGG
GGGGEGNGGYLSSSLSRLALPSSFFPGSSPRFKTVAAVLTDLKSTKVRVE
DAHSRNERFCEQSRNELQGINEGLGKMQAEFEETARRFQYFQDVREYLSS
LCGCLREKKGMIEELEEAMAQVRKGGRDRRIAVRVEDQEDALEEVLEKER
EGGRKGQMLLSLQGYMPTVVKTTRRRKHRRKRQELALRKLIGNSSSSNTG
DTTEAEATLSGAEEDEREVELSHSRQAKLLEAAAIIFEDTADEFRSLDPV
ATRFEEWKKKYPKDYATAYVPVALSQVFEPYVRMEMVRWNPLEGGRDGGG
EQGGEALEGFAWFERLFAYGQGEGEGGSEGEGEREDADERLVPVMVEKVV
VGKLQQILEDCYDPVSGKETQRAVAAVQGLLIYEPGKHALEMLLRAPLTR
IEEAITQVCLPLLKMEGVVEENEERGEGWITSDDSCL*
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Synonyms
Publications