NO01G03380, NO01G03380 (gene) Nannochloropsis oceanica

Overview
NameNO01G03380
Unique NameNO01G03380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5327
Alignment locationchr1:881746..887072 +

Link to JBrowse

Properties
Property NameValue
DescriptionRrna methylase family
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:881746..887072 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008173RNA methyltransferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029028Alpha/beta_knot_MTases
IPR001537SpoU_MeTrfase
Homology
BLAST of NO01G03380 vs. NCBI_GenBank
Match: EWM29298.1 (rrna methylase family [Nannochloropsis gaditana])

HSP 1 Score: 848.2 bits (2190), Expect = 3.600e-242
Identity = 454/816 (55.64%), Postives = 577/816 (70.71%), Query Frame = 0
Query:  569 RAVAVLRSVLEALLLQSSTRLFGEVKLDWAARLMSSLVKAAASLGLRRGKRDFFLSVALENVWRCLVLLYKIQRQGGLVKPTDNPLPVDMAFLFSALEMSSRKSVPDILCCISCQLPFHLGISDSNGTEQE----RQTRLDNVVTLVLGCIEECNYRQSVMQLAIEMVLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRELEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFPDVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQG-GVRDLVPEHVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAADCYSLQKKIVVSDVLTSLLPAPPTDKSQNTRGVLLQELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRMLKDPLFDQISSSAWKWIQMEEIHEGHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHR 1380
            R VA+L+S+L AL     + +F  V+  WA  L+  L  A A L  R   R  FLS+ L+++WR L LL+++             +PV+M F F+A+E +SR S+PDIL  ++  L  +L  S +  T Q+    RQ RL  +V LVL C+EECNYR+ V QLAI+MV SP +L DP  CRG D  VR F +RL++LGTVKR Y++L+ATARL SIW+++  A +LAGEF +E+ +LLVLREL +D                                   +LRIL+LGC+CDLFR  ++  +A Q EFL  L+ RLFE AAAVDLRRAQIL+SPDYS KLRAWQAICVL+PFV  E    +Q+ +  AMR VAVPS+RFYQ+ VL+ +CQKFPDVAIPFL+  L+DL VPPLTS S + +AGLACLT +  F GG+LPQ+YV PLLQ ILPW+SGQHA TRIVAQLLSFYLLSRL  GD+D              +  +      I+  +LS TL FL++HRE+A LR+K ML F++ SV   CT+ +LL Q    +G  V DLVP H+E  LR+AMT LYR+LEA+H MTYTS+AP+ +GENLF++ Q++ +   ++      A +++C S QKKI VSDV ++LLP+ P  +S N RGV LQE V+CASLLERVPN+AGLARTCEIFA SKL+IPD+R+L+DPLF++ISSSA +WI++EE+HEG TRA+++R KQEGYT+VGLEQTDDS CLS V LPRKM+LL+GREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWE++KQHR
Sbjct:    2 RTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFR-MNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDI------NTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHR 810          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: EWM29253.1 (hypothetical protein Naga_100029g18 [Nannochloropsis gaditana])

HSP 1 Score: 483.4 bits (1243), Expect = 2.300e-132
Identity = 270/544 (49.63%), Postives = 351/544 (64.52%), Query Frame = 0
Query:    1 MLCVLQEVLVPALGLNRSDPTFWTMLRRGLASDCNAVRKRALYVLSAQVEMAKTVGAVSTGAGATAHFPASASSPLKVKFLTWWRRFVQVMDTFNTALETHLLNQALPVCTSLLREAFAFTGNEEEEGQDGMLNGNAASLLPLPSFGWAEALLGRAISVTNFSVQRTYLLWLMSEEGVACVPLSKLGPRFIITKILPAFKEMSNLKDDRPKLGRFLARAIVAQEEDNGARREVLVAVFEYCKDVVRGAVVRQTLLGFIEFRDVFQQTSPCLQIDDVELARLLVCVMNSQYNQGLSQILAGRMVDCLEVFADCQSLIAAGPHGAAVVRTFLLDLPQKVALDSHYNRLVEWLGVSTVAGGATGWWGESTTSAIEALINGSGGHGSGELTMAASG-----------GSVWSSMEGGQCLENVNQSSMACCALACMYLPDLELAHALASALRVLGRIHSHPYLTLRSCLASLCLLRSLGSLLRRKHRPCLYEILRQHTGEVAEFLAAKLQESCLCTRADLYDSGNSG-VFGLCVQAFGTVIWLAADVG 533
            MLCVLQ  L+PAL L ++D  FWTM+R GL+S C+ VRKRALY+L+  V+ A++  A   G+ A A   A A +      L WW RFVQV+D FNTALETHLLNQ LP+CTSLLREAF     E+E  QD  L+ +  + LP P+F WA  LL RAI+V NF+VQR YLLWLM E+G   VPL KLGP FI   ILPAFKEMSN  +DR K+GRFLA  + +Q E   ARREVLVA+F +CKD V+ A+VRQTLLGFIE  DV    SPCL+  D+EL   ++  M SQYN GL Q+ A  ++ C E+F D   L AAGP+ AA++R  LL +P K +L + Y RL  +L V   AG    WW E+T  A +AL+ G+      ++T+A+SG           GS+W S EG +C E+++Q +++ CALACM+LP    A  L+    VLGRI SHPY++LR CL S  ++ +LG  LR +  P + E LRQH G  +E+LA  L+ES +    + Y  G+ G +F + V+ FGT +WLAAD G
Sbjct:  276 MLCVLQHALIPALSLGQADRGFWTMVRGGLSSSCSTVRKRALYILNVLVKHAQS-AACYAGSEAGATVQAGAQT------LLWWDRFVQVIDMFNTALETHLLNQTLPMCTSLLREAFG-VSEEKEMAQDRSLHEDVGAPLPEPAFKWATLLLARAITVPNFAVQRIYLLWLMGEDGKKSVPLGKLGPEFIERYILPAFKEMSNFTEDRTKVGRFLALLVTSQAECE-ARREVLVALFVFCKDSVQSALVRQTLLGFIEQDDVLPTFSPCLEAGDLELTCQMISAMESQYNHGLRQLFAELVIKCWEIFTDYLRLAAAGPNSAAILRNALLVIPVKASLGTCYERLARFLEVIAEAGDFRMWWSETTMQASKALVLGNRARCDDQITLASSGSLGNKHWSAPQGSIWFSAEGLRCFESIHQPNISSCALACMFLPASAAAQTLSPVQDVLGRIQSHPYISLRCCLVSFLMVCNLGKFLRERDHPAVRETLRQHAGGTSEYLAGLLRES-ISISENHYGEGDRGRIFDVLVEVFGTFVWLAADNG 809          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: GAY04094.1 (Hypothetical protein PINS_011911 [Pythium insidiosum])

HSP 1 Score: 268.9 bits (686), Expect = 9.000e-68
Identity = 233/695 (33.53%), Postives = 342/695 (49.21%), Query Frame = 0
Query:  729 IEMVLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE-----------------LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQG-----------------EFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFPDVAIP-FLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPEH----VEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAADCYSLQKKIVVSDVL--TSLLPAPPTDK-----SQNTRGVLLQELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRMLKDPLFDQISSSAWKWIQMEEIHEGHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQ 1378
            +  +  P  L    LC G    +RR+F RL D G V R  +L +   RL   WR  P  A     F +EI +LL+ +E                 +  D    XXXXXXXXXXXXXXXXXXXXXXXXX       +R ++L  L +L    DDG   +                   E +  +L RL ++  A D +R  +L S  +  KLR WQA+ VL   V+  +        + A     +P++RFY + +   +  +FP   +P  L+  L D  + P    S +   G+    +  A         +   LL A+ PW++  H  TR++AQ L   LL R        +  V+S     G  S SR+ A ++ A+F  +   FL  ++E   + R+   +F+  S    CT+  LL+  S+    V++L P      V   L++ MT LY   + EH             E                             ++Q+KI  S VL   S+LPA   +      S N+     Q +++CASL+++VPN+AGLARTCEIF AS+L++P LR+  D  F+ IS +A KWI MEE+   H  A L+R+K +G+T+V +EQT  S CLS+   P K++++LG+EKEGIPV +LQ +D+ V+IPQ GL+RSLNVHVS ++++WEY +Q
Sbjct: 1142 VHCMFQPTFLRREELCAGPKALMRRWFRRLFDFGHVHRPNVLFHVACRLAQCWRGAPETARW---FADEIVELLLFKEPRIADKQRSPGVPDVLRVSGDGDDEXXXXXXXXXXXXXXXXXXXXXXXXXFSVRDRFVRFIILSFLDEL--AVDDGVSNEXXXXXXXXXXXXXXXXXARELVDAVLLRLLDMNFADDWQRHFMLNSDGFGKKLRCWQALSVLSRHVQQRNLEAFSARFWRAFTSTQLPNVRFYMEVLGMQLALRFPSRTLPTHLLPLLRDFSLTPQVGASLLLVVGVVAHQRLAA----NSSDAWTDELLVALFPWLNASHGHTRVMAQFLLGMLLPRY-------LHRVDSDGDRSG--SGSRVDAATL-ASF-REIARFLSENKECKRMFRRQAKQFESFSPATQCTMLGLLS--SSSLNDVQELFPREDAISVSAQLKDMMTLLYDQFQREH----------FADELAXXXXXXXXXXXXXXXXXXXXXXXXXTINVQRKIDTSAVLLDDSVLPAAMKESRDELPSLNSLQRQRQPVILCASLVDKVPNLAGLARTCEIFNASRLVVPSLRVCDDEAFETISVTANKWIPMEEVRAEHLVAALQRWKSDGFTIVAVEQTASSQCLSQFTFPEKIVIVLGKEKEGIPVDVLQMVDVCVEIPQFGLIRSLNVHVSGAILLWEYTQQ 1804          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: XP_008860961.1 (hypothetical protein H310_00103 [Aphanomyces invadans] >ETW09550.1 hypothetical protein H310_00103 [Aphanomyces invadans])

HSP 1 Score: 255.8 bits (652), Expect = 7.900e-64
Identity = 199/692 (28.76%), Postives = 329/692 (47.54%), Query Frame = 0
Query:  696 TEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEMVLSPAILADPTLCRGTDTPVRRFFHRLVDLGT-VKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRELEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSV-YAAMRVVAVPSIRFYQDTVLALVCQKFPDVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPEHVEEVLREAMTSLYRD-LEAEHHMTYTSIAPVVRGENLFELKQDASSARAL-LLEGNAEAEAADCYSLQKKI------VVSDVLTSLLPAPPTDKSQNTRGVLLQELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRMLKDPLFDQISSSAWKWIQMEEIHEGHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQ 1378
            T++++Q  LD+V + V     +     S+    I+ V  P ++  P +    DT ++ +F +    G   +R  +L +    L ++WR  P +A     +V+EI  LL+ +E   D                                    +R +VL  L       +D   A  G  L  L   L E+    + +  Q++ S  +  +LR+WQA+CVL  +++      + D   + +     +P IR++ +     V   FP  + P +   L ++ + P  S S +  A ++        P  + PQ ++  LL  ++PW++  H  TR + Q ++  LL    + +  A                SR++       FL  TL +L  ++E   + R+   +         CT++ LL    NE     ++VP  + E ++E++++ +   L+ + H      + V     LF     +    AL    G  +A  +    +Q+KI       + ++L         D+  N R    Q ++VCASL++++PNVAGLARTCEIF ASKL+IP   M +D LF QIS +A KW+ MEE+   + R +LRR KQ GYT+V LEQT  S+CLS  A P + +++LG EKEGIPV +LQ +DL V+IPQ+G++RSLNVHVS ++++W Y +Q
Sbjct:  858 TDEDKQIHLDDVYSQVWAAYSDSRKPNSLTLAVIQCVFQPRLM--PLV----DT-LKSWFRKWTKFGEGGRRPNVLYHVATTLCNLWRRCPKSAE---PYVDEIVALLLYKEPTVDAKEQMVYLKADSAAVAL---------------KERYVRFVVLAFL-------EDAPVACHG-LLEKLTIALLELQLKPEYQTPQMVNSEGFGRQLRSWQALCVLSRYIQPHTVDAIHDLFWHKSFLNHNLPQIRYFIELFAMRVAVAFPTSSFPHVQKLLGNVHLMPQLSASLLLVASVSL----RLLPVDDTPQLHLDTLL-LMVPWLNSTHGHTRTIVQFVALTLLPYFLSHEATA----------------SRVA-------FLQPTLRYLSTNKECKRMFRRQTDQMASFQPEKECTLAGLLGGTLNE---FDEIVPVSIVEQIKESLSASFAQFLKEDRHHGGQYQSTVAGSLQLFPSVTSSQDDVALPTAAGTNDASVSHDQIVQRKIDPNATAFLDELLAQTQAETLRDQQVNARRQRHQPVIVCASLIDKIPNVAGLARTCEIFNASKLLIPSASMTQDILFRQISVTANKWVDMEEVPPANVRPYLRRMKQVGYTIVALEQTSSSACLSTFAFPERCVIVLGNEKEGIPVDILQAVDLCVEIPQMGVIRSLNVHVSGAILLWNYTQQ 1485          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: ETI32761.1 (hypothetical protein F443_20491 [Phytophthora parasitica P1569])

HSP 1 Score: 253.1 bits (645), Expect = 5.100e-63
Identity = 203/711 (28.55%), Postives = 337/711 (47.40%), Query Frame = 0
Query:  693 SNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEM-VLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE--LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFP-DVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPE----HVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAAD-CYSLQKKIVVSDVL---TSLLPAPPTDKSQNTRGVLL-------QELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRML-KDPLFDQISSSAWKWIQMEEIHE--GHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHRKS 1382
            SNG E+     LD ++  V     +   +   +  A+ M +  P  L    L       ++ +    +  G+  R  ++ +   RL   WR  P +A     FV+E+ +LL+ +E  ++E                                     +R+++L  L D+        +A Q + +  LL RL ++  A D ++  +L S  +  KLR+WQA+C++   V     + +  ++  A  V  +PS+R+Y +     +  KFP ++    L+  L D  + P    S +  +     +K        L  D    LL+ +LPW++  H  TR++AQ    YLL+++    +  +K             +S ++ G     FL  T  +L N++E   + R+   + +E       ++  +L+     + G  +L+P        E L+ AM  LY   + E+     S   +                       NAE+++++   ++Q+KI  + +L   ++L  A   D     RGV L       Q +++CASL++++PN+AGLARTCEIF A KLI+P+LRM  +D  F  +S++A KW+ +EE+       R  L R+K+EGYT+V +EQT  S  L+   LPRKM+L+LGREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WEY +Q   S
Sbjct:  720 SNGVEE-----LDRLLDEVWTAYNDSKAKPDALTRAVVMCIFQPVFLLRSEL----QATMKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRAHPVSAL---SFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDRFVRLIMLSFLDDVAVDRSSTTEATQ-QLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLLVSAYLVDSK---LDDNSLDID-CGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHQLKL------------SSNVTPG---LRFLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISEFG--ELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKI-----------------------NAESDSSNGTLTVQRKIDTTALLLEDSALPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQLMS 1369          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: ETK73102.1 (hypothetical protein L915_19928 [Phytophthora parasitica])

HSP 1 Score: 253.1 bits (645), Expect = 5.100e-63
Identity = 203/711 (28.55%), Postives = 337/711 (47.40%), Query Frame = 0
Query:  693 SNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEM-VLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE--LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFP-DVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPE----HVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAAD-CYSLQKKIVVSDVL---TSLLPAPPTDKSQNTRGVLL-------QELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRML-KDPLFDQISSSAWKWIQMEEIHE--GHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHRKS 1382
            SNG E+     LD ++  V     +   +   +  A+ M +  P  L    L       ++ +    +  G+  R  ++ +   RL   WR  P +A     FV+E+ +LL+ +E  ++E                                     +R+++L  L D+        +A Q + +  LL RL ++  A D ++  +L S  +  KLR+WQA+C++   V     + +  ++  A  V  +PS+R+Y +     +  KFP ++    L+  L D  + P    S +  +     +K        L  D    LL+ +LPW++  H  TR++AQ    YLL+++    +  +K             +S ++ G     FL  T  +L N++E   + R+   + +E       ++  +L+     + G  +L+P        E L+ AM  LY   + E+     S   +                       NAE+++++   ++Q+KI  + +L   ++L  A   D     RGV L       Q +++CASL++++PN+AGLARTCEIF A KLI+P+LRM  +D  F  +S++A KW+ +EE+       R  L R+K+EGYT+V +EQT  S  L+   LPRKM+L+LGREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WEY +Q   S
Sbjct:  720 SNGVEE-----LDRLLDEVWTAYNDSKAKPDALTRAVVMCIFQPVFLLRSEL----QATMKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRAHPVSAL---SFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDRFVRLIMLSFLDDVAVDRSSTTEATQ-QLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLLVSAYLVDSK---LDDNSLDID-CGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHQLKL------------SSNVTPG---LRFLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISEFG--ELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKI-----------------------NAESDSSNGTLTVQRKIDTTALLLEDSALPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQLMS 1369          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: ETL26542.1 (hypothetical protein L916_19809 [Phytophthora parasitica])

HSP 1 Score: 253.1 bits (645), Expect = 5.100e-63
Identity = 203/711 (28.55%), Postives = 337/711 (47.40%), Query Frame = 0
Query:  693 SNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEM-VLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE--LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFP-DVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPE----HVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAAD-CYSLQKKIVVSDVL---TSLLPAPPTDKSQNTRGVLL-------QELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRML-KDPLFDQISSSAWKWIQMEEIHE--GHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHRKS 1382
            SNG E+     LD ++  V     +   +   +  A+ M +  P  L    L       ++ +    +  G+  R  ++ +   RL   WR  P +A     FV+E+ +LL+ +E  ++E                                     +R+++L  L D+        +A Q + +  LL RL ++  A D ++  +L S  +  KLR+WQA+C++   V     + +  ++  A  V  +PS+R+Y +     +  KFP ++    L+  L D  + P    S +  +     +K        L  D    LL+ +LPW++  H  TR++AQ    YLL+++    +  +K             +S ++ G     FL  T  +L N++E   + R+   + +E       ++  +L+     + G  +L+P        E L+ AM  LY   + E+     S   +                       NAE+++++   ++Q+KI  + +L   ++L  A   D     RGV L       Q +++CASL++++PN+AGLARTCEIF A KLI+P+LRM  +D  F  +S++A KW+ +EE+       R  L R+K+EGYT+V +EQT  S  L+   LPRKM+L+LGREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WEY +Q   S
Sbjct:  926 SNGVEE-----LDRLLDEVWTAYNDSKAKPDALTRAVVMCIFQPVFLLRSEL----QATMKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRAHPVSAL---SFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDRFVRLIMLSFLDDVAVDRSSTTEATQ-QLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLLVSAYLVDSK---LDDNSLDID-CGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHQLKL------------SSNVTPG---LRFLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISEFG--ELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKI-----------------------NAESDSSNGTLTVQRKIDTTALLLEDSALPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQLMS 1575          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: ETM33005.1 (hypothetical protein L914_19708 [Phytophthora parasitica])

HSP 1 Score: 253.1 bits (645), Expect = 5.100e-63
Identity = 203/711 (28.55%), Postives = 337/711 (47.40%), Query Frame = 0
Query:  693 SNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEM-VLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE--LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFP-DVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPE----HVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAAD-CYSLQKKIVVSDVL---TSLLPAPPTDKSQNTRGVLL-------QELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRML-KDPLFDQISSSAWKWIQMEEIHE--GHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHRKS 1382
            SNG E+     LD ++  V     +   +   +  A+ M +  P  L    L       ++ +    +  G+  R  ++ +   RL   WR  P +A     FV+E+ +LL+ +E  ++E                                     +R+++L  L D+        +A Q + +  LL RL ++  A D ++  +L S  +  KLR+WQA+C++   V     + +  ++  A  V  +PS+R+Y +     +  KFP ++    L+  L D  + P    S +  +     +K        L  D    LL+ +LPW++  H  TR++AQ    YLL+++    +  +K             +S ++ G     FL  T  +L N++E   + R+   + +E       ++  +L+     + G  +L+P        E L+ AM  LY   + E+     S   +                       NAE+++++   ++Q+KI  + +L   ++L  A   D     RGV L       Q +++CASL++++PN+AGLARTCEIF A KLI+P+LRM  +D  F  +S++A KW+ +EE+       R  L R+K+EGYT+V +EQT  S  L+   LPRKM+L+LGREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WEY +Q   S
Sbjct:  720 SNGVEE-----LDRLLDEVWTAYNDSKAKPDALTRAVVMCIFQPVFLLRSEL----QATMKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRAHPVSAL---SFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDRFVRLIMLSFLDDVAVDRSSTTEATQ-QLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLLVSAYLVDSK---LDDNSLDID-CGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHQLKL------------SSNVTPG---LRFLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISEFG--ELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKI-----------------------NAESDSSNGTLTVQRKIDTTALLLEDSALPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQLMS 1369          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: ETP02583.1 (hypothetical protein F441_20374 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 253.1 bits (645), Expect = 5.100e-63
Identity = 203/711 (28.55%), Postives = 337/711 (47.40%), Query Frame = 0
Query:  693 SNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEM-VLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE--LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFP-DVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPE----HVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAAD-CYSLQKKIVVSDVL---TSLLPAPPTDKSQNTRGVLL-------QELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRML-KDPLFDQISSSAWKWIQMEEIHE--GHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHRKS 1382
            SNG E+     LD ++  V     +   +   +  A+ M +  P  L    L       ++ +    +  G+  R  ++ +   RL   WR  P +A     FV+E+ +LL+ +E  ++E                                     +R+++L  L D+        +A Q + +  LL RL ++  A D ++  +L S  +  KLR+WQA+C++   V     + +  ++  A  V  +PS+R+Y +     +  KFP ++    L+  L D  + P    S +  +     +K        L  D    LL+ +LPW++  H  TR++AQ    YLL+++    +  +K             +S ++ G     FL  T  +L N++E   + R+   + +E       ++  +L+     + G  +L+P        E L+ AM  LY   + E+     S   +                       NAE+++++   ++Q+KI  + +L   ++L  A   D     RGV L       Q +++CASL++++PN+AGLARTCEIF A KLI+P+LRM  +D  F  +S++A KW+ +EE+       R  L R+K+EGYT+V +EQT  S  L+   LPRKM+L+LGREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WEY +Q   S
Sbjct:  692 SNGVEE-----LDRLLDEVWTAYNDSKAKPDALTRAVVMCIFQPVFLLRSEL----QATMKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRAHPVSAL---SFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDRFVRLIMLSFLDDVAVDRSSTTEATQ-QLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLLVSAYLVDSK---LDDNSLDID-CGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHQLKL------------SSNVTPG---LRFLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISEFG--ELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKI-----------------------NAESDSSNGTLTVQRKIDTTALLLEDSALPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQLMS 1341          
BLAST of NO01G03380 vs. NCBI_GenBank
Match: ETP30757.1 (hypothetical protein F442_20307 [Phytophthora parasitica P10297])

HSP 1 Score: 253.1 bits (645), Expect = 5.100e-63
Identity = 203/711 (28.55%), Postives = 337/711 (47.40%), Query Frame = 0
Query:  693 SNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAIEM-VLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRE--LEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFP-DVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLVPE----HVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAAD-CYSLQKKIVVSDVL---TSLLPAPPTDKSQNTRGVLL-------QELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRML-KDPLFDQISSSAWKWIQMEEIHE--GHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHRKS 1382
            SNG E+     LD ++  V     +   +   +  A+ M +  P  L    L       ++ +    +  G+  R  ++ +   RL   WR  P +A     FV+E+ +LL+ +E  ++E                                     +R+++L  L D+        +A Q + +  LL RL ++  A D ++  +L S  +  KLR+WQA+C++   V     + +  ++  A  V  +PS+R+Y +     +  KFP ++    L+  L D  + P    S +  +     +K        L  D    LL+ +LPW++  H  TR++AQ    YLL+++    +  +K             +S ++ G     FL  T  +L N++E   + R+   + +E       ++  +L+     + G  +L+P        E L+ AM  LY   + E+     S   +                       NAE+++++   ++Q+KI  + +L   ++L  A   D     RGV L       Q +++CASL++++PN+AGLARTCEIF A KLI+P+LRM  +D  F  +S++A KW+ +EE+       R  L R+K+EGYT+V +EQT  S  L+   LPRKM+L+LGREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WEY +Q   S
Sbjct:  926 SNGVEE-----LDRLLDEVWTAYNDSKAKPDALTRAVVMCIFQPVFLLRSEL----QATMKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRAHPVSAL---SFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDRFVRLIMLSFLDDVAVDRSSTTEATQ-QLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLLVSAYLVDSK---LDDNSLDID-CGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHQLKL------------SSNVTPG---LRFLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISEFG--ELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKI-----------------------NAESDSSNGTLTVQRKIDTTALLLEDSALPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQLMS 1575          
The following BLAST results are available for this feature:
BLAST of NO01G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29298.13.600e-24255.64rrna methylase family [Nannochloropsis gaditana][more]
EWM29253.12.300e-13249.63hypothetical protein Naga_100029g18 [Nannochlorops... [more]
GAY04094.19.000e-6833.53Hypothetical protein PINS_011911 [Pythium insidios... [more]
XP_008860961.17.900e-6428.76hypothetical protein H310_00103 [Aphanomyces invad... [more]
ETI32761.15.100e-6328.55hypothetical protein F443_20491 [Phytophthora para... [more]
ETK73102.15.100e-6328.55hypothetical protein L915_19928 [Phytophthora para... [more]
ETL26542.15.100e-6328.55hypothetical protein L916_19809 [Phytophthora para... [more]
ETM33005.15.100e-6328.55hypothetical protein L914_19708 [Phytophthora para... [more]
ETP02583.15.100e-6328.55hypothetical protein F441_20374 [Phytophthora para... [more]
ETP30757.15.100e-6328.55hypothetical protein F442_20307 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007980NSK007980Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03380.1NO01G03380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G03380.2NO01G03380.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577037gene_340Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g19gene1357Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03380.1NO01G03380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G03380.2NO01G03380.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03380 ID=NO01G03380|Name=NO01G03380|organism=Nannochloropsis oceanica|type=gene|length=5327bp
GCATGGCGCTTGGCCAGCAGCAGATGGAGAAGGGTGATCAGATGCTTGCG
CTGGCAGAGGGGGTGGCCAAGGCTGGGGAGGCTTCTACCTTGGGACTCAA
GGAGCGCCTCGCCCTTCTCAATGCTCTCAGCAGCAGTATCACCACCAACC
GTCGCACCATGCGCCTCATCCCGGAGGATCTAGACCTGGGAGAGGGCTCC
GCGGATGCTCTTTTGCTTCATGTCAACGCAGTGGAGCTCTTGCTGGCAGC
TGGGCGAGAAGAGGTCGGCAGCAATGACGAAGACGCGTGGGGGACCGTGG
TGTCATTGTGGATCGAGAGGGTGGGACTTCCCATTCTTACCTCTCGGCGT
CTGGACCTTGGTCCCGCACAGAATGAAATAGGCATGCGTATAGGTCGTCT
ATTGGCATCGACAAGCAGTGAAGCGATACAACAAGCCATGCAGGCAGCAA
CATTGCATGTGCTTGACGATATGAGCGTGCGCGTGTCCTGTCCACGGGCA
GACAAAGACGGCGGGGAGCTGCTGGAGGTGATTAGTGCTCAAGCTGGATG
GGTTGCTTCTTTCTTAAATCAAGGTGCACAAGATGTTGATACATTCCCAC
TTGCTGTACTCGAGCGCACACTTGTAAACTTGGAAAGATGTCCGGCGCCT
GCGCTACGGTCGATTATTGTGAGGGTCGTGTCGCCTGCCTTGGCGAGTAT
GCTGCAAGGCAAGGAAAATAATGCGGCAGCACACGTGATAAATTCTAAGG
TCTGGGGATTTGTACGACGACTTGATGTGGAAGGGGGCTTGGAAGAGCAG
GTGAGTAGGCAGAAAGAGTAGGGGGGAATGCGCATTGCGGTACTTTACTC
TCCCCTTTACGCTTGCATCACTAGCTCTACATCGCGTCCATAACCGACAA
TTCTATGTGATTGCCTCTTTTTGTTTAATGTTAAGTAATTGTTTTTTCTT
TTCTTCTCTACACAGCGAGATGCCCTTGCGATGCTCTGCGTCTTACAAGA
AGTCCTTGTCCCTGCGCTCGGCCTCAATCGGTCTGACCCTACCTTCTGGA
CTATGCTTCGACGCGGACTCGCCAGCGACTGCAACGCGGTTCGTAAGCGT
GCCTTGTACGTACTAAGCGCCCAGGTAGAGATGGCCAAAACTGTCGGTGC
TGTTTCTACCGGTGCTGGTGCCACGGCCCATTTTCCTGCTTCTGCTTCGT
CTCCTCTTAAGGTCAAGTTCCTCACCTGGTGGCGACGCTTTGTCCAAGTC
ATGGACACATTCAATACGGCTCTTGAAACACATCTCCTGAATCAAGCTCT
ACCTGTCTGTACGTCATTGCTGCGTGAGGCTTTTGCGTTCACCGGGAACG
AGGAAGAGGAAGGGCAGGATGGCATGCTCAACGGCAACGCGGCCTCTTTG
CTCCCTCTACCTTCGTTTGGATGGGCAGAGGCGCTTCTTGGCCGCGCAAT
AAGTGTGACGAATTTTTCCGTCCAGCGCACGTACTTGCTGTGGCTGATGA
GTGAGGAGGGTGTCGCTTGCGTCCCCTTGAGCAAGCTTGGTCCCCGCTTT
ATTATCACTAAAATTCTGCCGGCTTTCAAGGAAATGAGCAACTTGAAGGA
CGACAGGCCAAAGCTTGGACGCTTCCTGGCGCGGGCCATTGTTGCGCAAG
AAGAGGATAATGGAGCGAGGCGGGAGGTGCTTGTGGCGGTGTTTGAGTAT
TGCAAGGATGTTGTGCGAGGCGCCGTGGTACGGCAGACACTGCTCGGGTT
TATAGAGTTCCGCGACGTCTTCCAGCAGACATCCCCTTGTCTGCAAATCG
ATGATGTAGAGCTGGCTCGTCTCCTCGTCTGTGTCATGAACTCACAATAC
AACCAAGGGCTCAGTCAAATATTAGCTGGGCGGATGGTGGATTGCTTGGA
GGTCTTTGCCGATTGTCAATCCCTCATTGCTGCTGGGCCTCACGGCGCCG
CCGTCGTGCGTACCTTCCTCTTAGACCTTCCGCAGAAAGTTGCATTGGAC
AGCCACTATAACCGTCTAGTTGAGTGGTTGGGGGTGTCGACAGTTGCGGG
CGGGGCCACAGGATGGTGGGGCGAGAGCACTACATCGGCCATCGAAGCTT
TGATAAACGGTAGTGGTGGTCACGGCAGTGGCGAGTTGACCATGGCAGCT
TCAGGAGGCTCTGTCTGGTCGTCTATGGAAGGGGGCCAGTGCTTGGAAAA
TGTTAATCAGTCGAGCATGGCATGCTGTGCTTTGGCTTGCATGTACTTGC
CGGATCTTGAGTTGGCACACGCCCTTGCTTCAGCTCTGCGGGTCCTGGGC
CGCATTCACTCTCATCCCTACTTGACCCTGCGGTCGTGTCTGGCTTCCCT
CTGTTTGCTGCGGTCACTGGGTTCCCTTTTGCGACGAAAGCACCGTCCGT
GTTTGTACGAGATTCTGCGGCAACACACAGGGGAAGTGGCCGAGTTTCTT
GCTGCCAAGCTTCAGGAGAGCTGCTTGTGTACCCGGGCCGACCTGTACGA
TAGTGGCAATTCAGGCGTATTTGGACTGTGCGTGCAGGCGTTTGGGACGG
TGATATGGCTGGCTGCGGATGTAGGgtaagtgatcaggcttcatatgctt
ttttttggccctctgacagggcataattattcgtatctcagttcatttgc
cttcacgattcgtggtcttcactccatctttcctccaccttgtcaaccct
ccatcagGCAAGTTGCCGGTGCTATCCAGCGTGTGCTGAAAACGTGTTCA
AGCGTGCTTAATGCTGGCGTGGATGATGCAGCGGCTGGTGATGCAGGGGA
AATTCGTCAGCTGGGGCGTGCAGTAGCCGTGCTGCGAAGCGTCCTGGAAG
CCCTCCTGCTGCAATCCAGCACGAGACTTTTTGGTGAAGTTAAATTGGAC
TGGGCTGCACGGCTTATGAGCAGCCTTGTCAAAGCCGCTGCCAGCTTGGG
CCTCCGACGAGGGAAGCGGGACTTTTTTTTGTCCGTGGCACTCGAGAATG
TATGGCGGTGCTTGGTTCTTCTTTACAAAATTCAACGCCAGGGCGGTTTG
GTGAAACCTACAGATAACCCTCTCCCCGTGGATATGGCATTTCTTTTTTC
CGCATTGGAGATGTCAAGCCGCAAATCGGTGCCCGATATTCTCTGCTGCA
TTAGCTGTCAACTTCCGTTTCACCTCGGCATATCCGACAGCAACGGCACG
GAGCAGGAACGACAAACGCGTCTCGACAACGTAGTCACGCTTGTGCTAGG
CTGCATTGAAGAATGTAACTACAGACAAAGTGTCATGCAACTTGCCATCG
AGATGGTGCTTTCGCCGGCCATACTCGCAGACCCCACCCTCTGTCGAGGA
ACAGATACCCCGGTGCGGCGTTTCTTTCATCGGCTTGTTGACCTCGGCAC
TGTCAAGCGGGCCTATATTCTTCTGAATGCCACGGCCAGGTTAACATCTA
TTTGGCGGACAGAACCGGCGGCTGCAGCACTTGCTGGGGAATTCGTAGAG
GAAATAGCGCAACTTTTGGTGCTTCGTGAGTTGGAAGAAGATGTGTACCA
GCAAGTGAATGAGGATGAGCGAGATTCCGAGCGAGATTCCGAGACAGACG
TCATCAGGGAGGAAATCAGAGAGCCCCAGGAAGAACACTCTGTCGCAGTG
CTTCGCATCTTGGTGCTTGGGTGTTTGTGCGATCTATTCCGACCACCAGA
TGATGGGGGAAAGGCCAAACAGGGCGAATTTTTGACCCCCCTTCTCACTC
GTTTGTTTGAAATAGCAGCTGCCGTAGATTTAAGAAGGGCTCAAATTCTG
ACTTCCCCCGACTACTCGTGCAAGCTTCGGGCGTGGCAAGCCATTTGCGT
GCTTGTGCCGTTTGTGAGGGCTGAGGATGCATCGCTGGTACAGGACTCGG
TATATGCAGCCATGCGTGTGGTGGCGGTACCCTCCATCCGTTTTTACCAA
GATACCGTTTTGGCGCTTGTCTGCCAAAAGTTTCCCGACGTGGCGATTCC
TTTCCTTGTGACGGCTTTGACCGACCTCCAAGTCCCGCCATTAACCAGCG
GCTCGTTCATTTCTGCGGCGGGTTTGGCTTGCTTGACCAAAAATACTGCT
TTCCCAGGTGGAGAGCTTCCACAAGACTACGTTGCCCCCCTGCTCCAAGC
CATCTTGCCGTGGATTTCAGGGCAACACGCAATTACGCGTATCGTCGCAC
AGCTCCTATCCTTTTATCTCTTGTCTCGGCTACCCACAGGAGATCTGGAT
GCGGTCAAAGCTGTGGAATCGGGTCAGAGCGGGAAAGGCGGAGTCAGCAA
CAGTAGAATCTCTGCTGGCAGTATTGACGCGACTTTCCTGAGTCAAACTT
TGAATTTCTTGAAAAACCACCGCGAGATAGCGAGCTTGCGCCGCAAAGCT
ATGCTGCGCTTCCAGGAAACTTCAGTACCCGCCTGCTGTACTGTATCACA
CCTTCTTGCCCAGCACTCGAATGAGCAAGGCGGTGTGCGTGACCTGGTGC
CGGAGCATGTAGAAGAGGTGCTGCGGGAAGCGATGACGTCTCTGTATCGA
GACCTGGAGGCAGAACACCACATGACTTACACATCCATAGCGCCCGTGGT
CCGAGGAGAAAATCTTTTTGAGCTTAAGCAAGACGCAAGTAGTGCCCGAG
CCTTGTTGCTAGAGGGGAATGCAGAGGCAGAGGCGGCCGACTGTTATTCG
CTACAAAAAAAGATTGTGGTCTCTGACGTGCTGACTTCACTTCTCCCGGC
TCCACCCACCGACAAATCCCAAAATACGCGAGGGGTTCTGCTGCAAGAGC
TCGTGGTGTGCGCGTCATTGCTGGAGCGGGTACCTAATGTAGCCGGCCTC
GCCCGAACATGCGAGATCTTCGCCGCATCCAAACTTATTATTCCCGACTT
GCGCATGCTCAAAGACCCGCTATTTGACCAAATTAGCAGCAGTGCGTGGA
AATGGATTCAGATGGAGGAGATCCATGAAGGGCACACTCGCGCCTTTCTT
CGGCGCTACAAACAGGAGGGTTACACGGTGGTGGGGCTCGAGCAAACAGA
CGACAGCTCGTGCCTCTCTAGGGTGGCTTTGCCTCGCAAGATGCTCTTGC
TTTTGGGCCGCGAGAAGGAGGGCATTCCCGTTCCACTGCTTCAAGAGTTG
GATTTGGTTGTGCAGATTCCTCAGCTGGGTCTAGTGAGGAGTTTAAATGT
GCACGTGAGCGCGTCTCTCATTGTATGGGAGTATTTTAAGCAGCATCGCA
AAAGCTGCGGTAAGGACCAACAATGGTAGATTAGAACTAATTGAAATCAT
CAAAGTACAATGCATGTATTGTCCTAG
back to top

protein sequence of NO01G03380.1

>NO01G03380.1-protein ID=NO01G03380.1-protein|Name=NO01G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1660bp
MALGQQQMEKGDQMLALAEGVAKAGEASTLGLKERLALLNALSSSITTNR
RTMRLIPEDLDLGEGSADALLLHVNAVELLLAAGREEVGSNDEDAWGTVV
SLWIERVGLPILTSRRLDLGPAQNEIGMRIGRLLASTSSEAIQQAMQAAT
LHVLDDMSVRVSCPRADKDGGELLEVISAQAGWVASFLNQGAQDVDTFPL
AVLERTLVNLERCPAPALRSIIVRVVSPALASMLQGKENNAAAHVINSKV
WGFVRRLDVEGGLEEQRDALAMLCVLQEVLVPALGLNRSDPTFWTMLRRG
LASDCNAVRKRALYVLSAQVEMAKTVGAVSTGAGATAHFPASASSPLKVK
FLTWWRRFVQVMDTFNTALETHLLNQALPVCTSLLREAFAFTGNEEEEGQ
DGMLNGNAASLLPLPSFGWAEALLGRAISVTNFSVQRTYLLWLMSEEGVA
CVPLSKLGPRFIITKILPAFKEMSNLKDDRPKLGRFLARAIVAQEEDNGA
RREVLVAVFEYCKDVVRGAVVRQTLLGFIEFRDVFQQTSPCLQIDDVELA
RLLVCVMNSQYNQGLSQILAGRMVDCLEVFADCQSLIAAGPHGAAVVRTF
LLDLPQKVALDSHYNRLVEWLGVSTVAGGATGWWGESTTSAIEALINGSG
GHGSGELTMAASGGSVWSSMEGGQCLENVNQSSMACCALACMYLPDLELA
HALASALRVLGRIHSHPYLTLRSCLASLCLLRSLGSLLRRKHRPCLYEIL
RQHTGEVAEFLAAKLQESCLCTRADLYDSGNSGVFGLCVQAFGTVIWLAA
DVGQVAGAIQRVLKTCSSVLNAGVDDAAAGDAGEIRQLGRAVAVLRSVLE
ALLLQSSTRLFGEVKLDWAARLMSSLVKAAASLGLRRGKRDFFLSVALEN
VWRCLVLLYKIQRQGGLVKPTDNPLPVDMAFLFSALEMSSRKSVPDILCC
ISCQLPFHLGISDSNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAI
EMVLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTS
IWRTEPAAAALAGEFVEEIAQLLVLRELEEDVYQQVNEDERDSERDSETD
VIREEIREPQEEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLT
RLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDS
VYAAMRVVAVPSIRFYQDTVLALVCQKFPDVAIPFLVTALTDLQVPPLTS
GSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVA
QLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQT
LNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLV
PEHVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSAR
ALLLEGNAEAEAADCYSLQKKIVVSDVLTSLLPAPPTDKSQNTRGVLLQE
LVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRMLKDPLFDQISSSAW
KWIQMEEIHEGHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLL
LLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHR
KSCGKDQQW*
back to top

protein sequence of NO01G03380.2

>NO01G03380.2-protein ID=NO01G03380.2-protein|Name=NO01G03380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1389bp
MLCVLQEVLVPALGLNRSDPTFWTMLRRGLASDCNAVRKRALYVLSAQVE
MAKTVGAVSTGAGATAHFPASASSPLKVKFLTWWRRFVQVMDTFNTALET
HLLNQALPVCTSLLREAFAFTGNEEEEGQDGMLNGNAASLLPLPSFGWAE
ALLGRAISVTNFSVQRTYLLWLMSEEGVACVPLSKLGPRFIITKILPAFK
EMSNLKDDRPKLGRFLARAIVAQEEDNGARREVLVAVFEYCKDVVRGAVV
RQTLLGFIEFRDVFQQTSPCLQIDDVELARLLVCVMNSQYNQGLSQILAG
RMVDCLEVFADCQSLIAAGPHGAAVVRTFLLDLPQKVALDSHYNRLVEWL
GVSTVAGGATGWWGESTTSAIEALINGSGGHGSGELTMAASGGSVWSSME
GGQCLENVNQSSMACCALACMYLPDLELAHALASALRVLGRIHSHPYLTL
RSCLASLCLLRSLGSLLRRKHRPCLYEILRQHTGEVAEFLAAKLQESCLC
TRADLYDSGNSGVFGLCVQAFGTVIWLAADVGQVAGAIQRVLKTCSSVLN
AGVDDAAAGDAGEIRQLGRAVAVLRSVLEALLLQSSTRLFGEVKLDWAAR
LMSSLVKAAASLGLRRGKRDFFLSVALENVWRCLVLLYKIQRQGGLVKPT
DNPLPVDMAFLFSALEMSSRKSVPDILCCISCQLPFHLGISDSNGTEQER
QTRLDNVVTLVLGCIEECNYRQSVMQLAIEMVLSPAILADPTLCRGTDTP
VRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQ
LLVLRELEEDVYQQVNEDERDSERDSETDVIREEIREPQEEHSVAVLRIL
VLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPD
YSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVL
ALVCQKFPDVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGG
ELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKA
VESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRF
QETSVPACCTVSHLLAQHSNEQGGVRDLVPEHVEEVLREAMTSLYRDLEA
EHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAADCYSLQKK
IVVSDVLTSLLPAPPTDKSQNTRGVLLQELVVCASLLERVPNVAGLARTC
EIFAASKLIIPDLRMLKDPLFDQISSSAWKWIQMEEIHEGHTRAFLRRYK
QEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVV
QIPQLGLVRSLNVHVSASLIVWEYFKQHRKSCGKDQQW*
back to top
Synonyms
Publications