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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:881746..887072 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G03380.1 vs.
Match: EWM29298.1 (rrna methylase family [Nannochloropsis gaditana]) HSP 1 Score: 860.5 bits (2222), Expect = 8.400e-246 Identity = 465/819 (56.78%), Postives = 595/819 (72.65%), Query Frame = 0
Query: 840 RAVAVLRSVLEALLLQSSTRLFGEVKLDWAARLMSSLVKAAASLGLRRGKRDFFLSVALENVWRCLVLLYKIQRQGGLVKPTDNPLPVDMAFLFSALEMSSRKSVPDILCCISCQLPFHLGISDSNGTEQE----RQTRLDNVVTLVLGCIEECNYRQSVMQLAIEMVLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTSIWRTEPAAAALAGEFVEEIAQLLVLRELEEDVYQQVNEDERD---SERDSETDVIREEIREPQEEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLTRLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDSVYAAMRVVAVPSIRFYQDTVLALVCQKFPDVAIPFLVTALTDLQVPPLTSGSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVAQLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQTLNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQG-GVRDLVPEHVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSARALLLEGNAEAEAADCYSLQKKIVVSDVLTSLLPAPPTDKSQNTRGVLLQELVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRMLKDPLFDQISSSAWKWIQMEEIHEGHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLLLLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHR 1651
R VA+L+S+L AL + +F V+ WA L+ L A A L R R FLS+ L+++WR L LL+++ +PV+M F F+A+E +SR S+PDIL ++ L +L S + T Q+ RQ RL +V LVL C+EECNYR+ V QLAI+MV SP +L DP CRG D VR F +RL++LGTVKR Y++L+ATARL SIW+++ A +LAGEF +E+ +LLVLREL +DVYQQ ++ R+ S + T V +++ RE Q +LRIL+LGC+CDLFR ++ +A Q EFL L+ RLFE AAAVDLRRAQIL+SPDYS KLRAWQAICVL+PFV E +Q+ + AMR VAVPS+RFYQ+ VL+ +CQKFPDVAIPFL+ L+DL VPPLTS S + +AGLACLT + F GG+LPQ+YV PLLQ ILPW+SGQHA TRIVAQLLSFYLLSRL GD+D + + I+ +LS TL FL++HRE+A LR+K ML F++ SV CT+ +LL Q +G V DLVP H+E LR+AMT LYR+LEA+H MTYTS+AP+ +GENLF++ Q++ + ++ A +++C S QKKI VSDV ++LLP+ P +S N RGV LQE V+CASLLERVPN+AGLARTCEIFA SKL+IPD+R+L+DPLF++ISSSA +WI++EE+HEG TRA+++R KQEGYT+VGLEQTDDS CLS V LPRKM+LL+GREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWE++KQHR
Sbjct: 2 RTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQ---PCILLRILLLGCICDLFR-MNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDI------NTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHR 810
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G03380.1 ID=NO01G03380.1|Name=NO01G03380.1|organism=Nannochloropsis oceanica|type=mRNA|length=5030bp
GCATGGCGCTTGGCCAGCAGCAGATGGAGAAGGGTGATCAGATGCTTGCG
CTGGCAGAGGGGGTGGCCAAGGCTGGGGAGGCTTCTACCTTGGGACTCAA
GGAGCGCCTCGCCCTTCTCAATGCTCTCAGCAGCAGTATCACCACCAACC
GTCGCACCATGCGCCTCATCCCGGAGGATCTAGACCTGGGAGAGGGCTCC
GCGGATGCTCTTTTGCTTCATGTCAACGCAGTGGAGCTCTTGCTGGCAGC
TGGGCGAGAAGAGGTCGGCAGCAATGACGAAGACGCGTGGGGGACCGTGG
TGTCATTGTGGATCGAGAGGGTGGGACTTCCCATTCTTACCTCTCGGCGT
CTGGACCTTGGTCCCGCACAGAATGAAATAGGCATGCGTATAGGTCGTCT
ATTGGCATCGACAAGCAGTGAAGCGATACAACAAGCCATGCAGGCAGCAA
CATTGCATGTGCTTGACGATATGAGCGTGCGCGTGTCCTGTCCACGGGCA
GACAAAGACGGCGGGGAGCTGCTGGAGGTGATTAGTGCTCAAGCTGGATG
GGTTGCTTCTTTCTTAAATCAAGGTGCACAAGATGTTGATACATTCCCAC
TTGCTGTACTCGAGCGCACACTTGTAAACTTGGAAAGATGTCCGGCGCCT
GCGCTACGGTCGATTATTGTGAGGGTCGTGTCGCCTGCCTTGGCGAGTAT
GCTGCAAGGCAAGGAAAATAATGCGGCAGCACACGTGATAAATTCTAAGG
TCTGGGGATTTGTACGACGACTTGATGTGGAAGGGGGCTTGGAAGAGCAG
CGAGATGCCCTTGCGATGCTCTGCGTCTTACAAGAAGTCCTTGTCCCTGC
GCTCGGCCTCAATCGGTCTGACCCTACCTTCTGGACTATGCTTCGACGCG
GACTCGCCAGCGACTGCAACGCGGTTCGTAAGCGTGCCTTGTACGTACTA
AGCGCCCAGGTAGAGATGGCCAAAACTGTCGGTGCTGTTTCTACCGGTGC
TGGTGCCACGGCCCATTTTCCTGCTTCTGCTTCGTCTCCTCTTAAGGTCA
AGTTCCTCACCTGGTGGCGACGCTTTGTCCAAGTCATGGACACATTCAAT
ACGGCTCTTGAAACACATCTCCTGAATCAAGCTCTACCTGTCTGTACGTC
ATTGCTGCGTGAGGCTTTTGCGTTCACCGGGAACGAGGAAGAGGAAGGGC
AGGATGGCATGCTCAACGGCAACGCGGCCTCTTTGCTCCCTCTACCTTCG
TTTGGATGGGCAGAGGCGCTTCTTGGCCGCGCAATAAGTGTGACGAATTT
TTCCGTCCAGCGCACGTACTTGCTGTGGCTGATGAGTGAGGAGGGTGTCG
CTTGCGTCCCCTTGAGCAAGCTTGGTCCCCGCTTTATTATCACTAAAATT
CTGCCGGCTTTCAAGGAAATGAGCAACTTGAAGGACGACAGGCCAAAGCT
TGGACGCTTCCTGGCGCGGGCCATTGTTGCGCAAGAAGAGGATAATGGAG
CGAGGCGGGAGGTGCTTGTGGCGGTGTTTGAGTATTGCAAGGATGTTGTG
CGAGGCGCCGTGGTACGGCAGACACTGCTCGGGTTTATAGAGTTCCGCGA
CGTCTTCCAGCAGACATCCCCTTGTCTGCAAATCGATGATGTAGAGCTGG
CTCGTCTCCTCGTCTGTGTCATGAACTCACAATACAACCAAGGGCTCAGT
CAAATATTAGCTGGGCGGATGGTGGATTGCTTGGAGGTCTTTGCCGATTG
TCAATCCCTCATTGCTGCTGGGCCTCACGGCGCCGCCGTCGTGCGTACCT
TCCTCTTAGACCTTCCGCAGAAAGTTGCATTGGACAGCCACTATAACCGT
CTAGTTGAGTGGTTGGGGGTGTCGACAGTTGCGGGCGGGGCCACAGGATG
GTGGGGCGAGAGCACTACATCGGCCATCGAAGCTTTGATAAACGGTAGTG
GTGGTCACGGCAGTGGCGAGTTGACCATGGCAGCTTCAGGAGGCTCTGTC
TGGTCGTCTATGGAAGGGGGCCAGTGCTTGGAAAATGTTAATCAGTCGAG
CATGGCATGCTGTGCTTTGGCTTGCATGTACTTGCCGGATCTTGAGTTGG
CACACGCCCTTGCTTCAGCTCTGCGGGTCCTGGGCCGCATTCACTCTCAT
CCCTACTTGACCCTGCGGTCGTGTCTGGCTTCCCTCTGTTTGCTGCGGTC
ACTGGGTTCCCTTTTGCGACGAAAGCACCGTCCGTGTTTGTACGAGATTC
TGCGGCAACACACAGGGGAAGTGGCCGAGTTTCTTGCTGCCAAGCTTCAG
GAGAGCTGCTTGTGTACCCGGGCCGACCTGTACGATAGTGGCAATTCAGG
CGTATTTGGACTGTGCGTGCAGGCGTTTGGGACGGTGATATGGCTGGCTG
CGGATGTAGGGCAAGTTGCCGGTGCTATCCAGCGTGTGCTGAAAACGTGT
TCAAGCGTGCTTAATGCTGGCGTGGATGATGCAGCGGCTGGTGATGCAGG
GGAAATTCGTCAGCTGGGGCGTGCAGTAGCCGTGCTGCGAAGCGTCCTGG
AAGCCCTCCTGCTGCAATCCAGCACGAGACTTTTTGGTGAAGTTAAATTG
GACTGGGCTGCACGGCTTATGAGCAGCCTTGTCAAAGCCGCTGCCAGCTT
GGGCCTCCGACGAGGGAAGCGGGACTTTTTTTTGTCCGTGGCACTCGAGA
ATGTATGGCGGTGCTTGGTTCTTCTTTACAAAATTCAACGCCAGGGCGGT
TTGGTGAAACCTACAGATAACCCTCTCCCCGTGGATATGGCATTTCTTTT
TTCCGCATTGGAGATGTCAAGCCGCAAATCGGTGCCCGATATTCTCTGCT
GCATTAGCTGTCAACTTCCGTTTCACCTCGGCATATCCGACAGCAACGGC
ACGGAGCAGGAACGACAAACGCGTCTCGACAACGTAGTCACGCTTGTGCT
AGGCTGCATTGAAGAATGTAACTACAGACAAAGTGTCATGCAACTTGCCA
TCGAGATGGTGCTTTCGCCGGCCATACTCGCAGACCCCACCCTCTGTCGA
GGAACAGATACCCCGGTGCGGCGTTTCTTTCATCGGCTTGTTGACCTCGG
CACTGTCAAGCGGGCCTATATTCTTCTGAATGCCACGGCCAGGTTAACAT
CTATTTGGCGGACAGAACCGGCGGCTGCAGCACTTGCTGGGGAATTCGTA
GAGGAAATAGCGCAACTTTTGGTGCTTCGTGAGTTGGAAGAAGATGTGTA
CCAGCAAGTGAATGAGGATGAGCGAGATTCCGAGCGAGATTCCGAGACAG
ACGTCATCAGGGAGGAAATCAGAGAGCCCCAGGAAGAACACTCTGTCGCA
GTGCTTCGCATCTTGGTGCTTGGGTGTTTGTGCGATCTATTCCGACCACC
AGATGATGGGGGAAAGGCCAAACAGGGCGAATTTTTGACCCCCCTTCTCA
CTCGTTTGTTTGAAATAGCAGCTGCCGTAGATTTAAGAAGGGCTCAAATT
CTGACTTCCCCCGACTACTCGTGCAAGCTTCGGGCGTGGCAAGCCATTTG
CGTGCTTGTGCCGTTTGTGAGGGCTGAGGATGCATCGCTGGTACAGGACT
CGGTATATGCAGCCATGCGTGTGGTGGCGGTACCCTCCATCCGTTTTTAC
CAAGATACCGTTTTGGCGCTTGTCTGCCAAAAGTTTCCCGACGTGGCGAT
TCCTTTCCTTGTGACGGCTTTGACCGACCTCCAAGTCCCGCCATTAACCA
GCGGCTCGTTCATTTCTGCGGCGGGTTTGGCTTGCTTGACCAAAAATACT
GCTTTCCCAGGTGGAGAGCTTCCACAAGACTACGTTGCCCCCCTGCTCCA
AGCCATCTTGCCGTGGATTTCAGGGCAACACGCAATTACGCGTATCGTCG
CACAGCTCCTATCCTTTTATCTCTTGTCTCGGCTACCCACAGGAGATCTG
GATGCGGTCAAAGCTGTGGAATCGGGTCAGAGCGGGAAAGGCGGAGTCAG
CAACAGTAGAATCTCTGCTGGCAGTATTGACGCGACTTTCCTGAGTCAAA
CTTTGAATTTCTTGAAAAACCACCGCGAGATAGCGAGCTTGCGCCGCAAA
GCTATGCTGCGCTTCCAGGAAACTTCAGTACCCGCCTGCTGTACTGTATC
ACACCTTCTTGCCCAGCACTCGAATGAGCAAGGCGGTGTGCGTGACCTGG
TGCCGGAGCATGTAGAAGAGGTGCTGCGGGAAGCGATGACGTCTCTGTAT
CGAGACCTGGAGGCAGAACACCACATGACTTACACATCCATAGCGCCCGT
GGTCCGAGGAGAAAATCTTTTTGAGCTTAAGCAAGACGCAAGTAGTGCCC
GAGCCTTGTTGCTAGAGGGGAATGCAGAGGCAGAGGCGGCCGACTGTTAT
TCGCTACAAAAAAAGATTGTGGTCTCTGACGTGCTGACTTCACTTCTCCC
GGCTCCACCCACCGACAAATCCCAAAATACGCGAGGGGTTCTGCTGCAAG
AGCTCGTGGTGTGCGCGTCATTGCTGGAGCGGGTACCTAATGTAGCCGGC
CTCGCCCGAACATGCGAGATCTTCGCCGCATCCAAACTTATTATTCCCGA
CTTGCGCATGCTCAAAGACCCGCTATTTGACCAAATTAGCAGCAGTGCGT
GGAAATGGATTCAGATGGAGGAGATCCATGAAGGGCACACTCGCGCCTTT
CTTCGGCGCTACAAACAGGAGGGTTACACGGTGGTGGGGCTCGAGCAAAC
AGACGACAGCTCGTGCCTCTCTAGGGTGGCTTTGCCTCGCAAGATGCTCT
TGCTTTTGGGCCGCGAGAAGGAGGGCATTCCCGTTCCACTGCTTCAAGAG
TTGGATTTGGTTGTGCAGATTCCTCAGCTGGGTCTAGTGAGGAGTTTAAA
TGTGCACGTGAGCGCGTCTCTCATTGTATGGGAGTATTTTAAGCAGCATC
GCAAAAGCTGCGGTAAGGACCAACAATGGTAGATTAGAACTAATTGAAAT
CATCAAAGTACAATGCATGTATTGTCCTAG back to topprotein sequence of NO01G03380.1 >NO01G03380.1-protein ID=NO01G03380.1-protein|Name=NO01G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1660bp
MALGQQQMEKGDQMLALAEGVAKAGEASTLGLKERLALLNALSSSITTNR
RTMRLIPEDLDLGEGSADALLLHVNAVELLLAAGREEVGSNDEDAWGTVV
SLWIERVGLPILTSRRLDLGPAQNEIGMRIGRLLASTSSEAIQQAMQAAT
LHVLDDMSVRVSCPRADKDGGELLEVISAQAGWVASFLNQGAQDVDTFPL
AVLERTLVNLERCPAPALRSIIVRVVSPALASMLQGKENNAAAHVINSKV
WGFVRRLDVEGGLEEQRDALAMLCVLQEVLVPALGLNRSDPTFWTMLRRG
LASDCNAVRKRALYVLSAQVEMAKTVGAVSTGAGATAHFPASASSPLKVK
FLTWWRRFVQVMDTFNTALETHLLNQALPVCTSLLREAFAFTGNEEEEGQ
DGMLNGNAASLLPLPSFGWAEALLGRAISVTNFSVQRTYLLWLMSEEGVA
CVPLSKLGPRFIITKILPAFKEMSNLKDDRPKLGRFLARAIVAQEEDNGA
RREVLVAVFEYCKDVVRGAVVRQTLLGFIEFRDVFQQTSPCLQIDDVELA
RLLVCVMNSQYNQGLSQILAGRMVDCLEVFADCQSLIAAGPHGAAVVRTF
LLDLPQKVALDSHYNRLVEWLGVSTVAGGATGWWGESTTSAIEALINGSG
GHGSGELTMAASGGSVWSSMEGGQCLENVNQSSMACCALACMYLPDLELA
HALASALRVLGRIHSHPYLTLRSCLASLCLLRSLGSLLRRKHRPCLYEIL
RQHTGEVAEFLAAKLQESCLCTRADLYDSGNSGVFGLCVQAFGTVIWLAA
DVGQVAGAIQRVLKTCSSVLNAGVDDAAAGDAGEIRQLGRAVAVLRSVLE
ALLLQSSTRLFGEVKLDWAARLMSSLVKAAASLGLRRGKRDFFLSVALEN
VWRCLVLLYKIQRQGGLVKPTDNPLPVDMAFLFSALEMSSRKSVPDILCC
ISCQLPFHLGISDSNGTEQERQTRLDNVVTLVLGCIEECNYRQSVMQLAI
EMVLSPAILADPTLCRGTDTPVRRFFHRLVDLGTVKRAYILLNATARLTS
IWRTEPAAAALAGEFVEEIAQLLVLRELEEDVYQQVNEDERDSERDSETD
VIREEIREPQEEHSVAVLRILVLGCLCDLFRPPDDGGKAKQGEFLTPLLT
RLFEIAAAVDLRRAQILTSPDYSCKLRAWQAICVLVPFVRAEDASLVQDS
VYAAMRVVAVPSIRFYQDTVLALVCQKFPDVAIPFLVTALTDLQVPPLTS
GSFISAAGLACLTKNTAFPGGELPQDYVAPLLQAILPWISGQHAITRIVA
QLLSFYLLSRLPTGDLDAVKAVESGQSGKGGVSNSRISAGSIDATFLSQT
LNFLKNHREIASLRRKAMLRFQETSVPACCTVSHLLAQHSNEQGGVRDLV
PEHVEEVLREAMTSLYRDLEAEHHMTYTSIAPVVRGENLFELKQDASSAR
ALLLEGNAEAEAADCYSLQKKIVVSDVLTSLLPAPPTDKSQNTRGVLLQE
LVVCASLLERVPNVAGLARTCEIFAASKLIIPDLRMLKDPLFDQISSSAW
KWIQMEEIHEGHTRAFLRRYKQEGYTVVGLEQTDDSSCLSRVALPRKMLL
LLGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEYFKQHR
KSCGKDQQW* back to topmRNA from alignment at chr1:881746..887072+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G03380.1 ID=NO01G03380.1|Name=NO01G03380.1|organism=Nannochloropsis oceanica|type=mRNA|length=5327bp|location=Sequence derived from alignment at chr1:881746..887072+ (Nannochloropsis oceanica)
GCATGGCGCTTGGCCAGCAGCAGATGGAGAAGGGTGATCAGATGCTTGCG
CTGGCAGAGGGGGTGGCCAAGGCTGGGGAGGCTTCTACCTTGGGACTCAA
GGAGCGCCTCGCCCTTCTCAATGCTCTCAGCAGCAGTATCACCACCAACC
GTCGCACCATGCGCCTCATCCCGGAGGATCTAGACCTGGGAGAGGGCTCC
GCGGATGCTCTTTTGCTTCATGTCAACGCAGTGGAGCTCTTGCTGGCAGC
TGGGCGAGAAGAGGTCGGCAGCAATGACGAAGACGCGTGGGGGACCGTGG
TGTCATTGTGGATCGAGAGGGTGGGACTTCCCATTCTTACCTCTCGGCGT
CTGGACCTTGGTCCCGCACAGAATGAAATAGGCATGCGTATAGGTCGTCT
ATTGGCATCGACAAGCAGTGAAGCGATACAACAAGCCATGCAGGCAGCAA
CATTGCATGTGCTTGACGATATGAGCGTGCGCGTGTCCTGTCCACGGGCA
GACAAAGACGGCGGGGAGCTGCTGGAGGTGATTAGTGCTCAAGCTGGATG
GGTTGCTTCTTTCTTAAATCAAGGTGCACAAGATGTTGATACATTCCCAC
TTGCTGTACTCGAGCGCACACTTGTAAACTTGGAAAGATGTCCGGCGCCT
GCGCTACGGTCGATTATTGTGAGGGTCGTGTCGCCTGCCTTGGCGAGTAT
GCTGCAAGGCAAGGAAAATAATGCGGCAGCACACGTGATAAATTCTAAGG
TCTGGGGATTTGTACGACGACTTGATGTGGAAGGGGGCTTGGAAGAGCAG
GTGAGTAGGCAGAAAGAGTAGGGGGGAATGCGCATTGCGGTACTTTACTC
TCCCCTTTACGCTTGCATCACTAGCTCTACATCGCGTCCATAACCGACAA
TTCTATGTGATTGCCTCTTTTTGTTTAATGTTAAGTAATTGTTTTTTCTT
TTCTTCTCTACACAGCGAGATGCCCTTGCGATGCTCTGCGTCTTACAAGA
AGTCCTTGTCCCTGCGCTCGGCCTCAATCGGTCTGACCCTACCTTCTGGA
CTATGCTTCGACGCGGACTCGCCAGCGACTGCAACGCGGTTCGTAAGCGT
GCCTTGTACGTACTAAGCGCCCAGGTAGAGATGGCCAAAACTGTCGGTGC
TGTTTCTACCGGTGCTGGTGCCACGGCCCATTTTCCTGCTTCTGCTTCGT
CTCCTCTTAAGGTCAAGTTCCTCACCTGGTGGCGACGCTTTGTCCAAGTC
ATGGACACATTCAATACGGCTCTTGAAACACATCTCCTGAATCAAGCTCT
ACCTGTCTGTACGTCATTGCTGCGTGAGGCTTTTGCGTTCACCGGGAACG
AGGAAGAGGAAGGGCAGGATGGCATGCTCAACGGCAACGCGGCCTCTTTG
CTCCCTCTACCTTCGTTTGGATGGGCAGAGGCGCTTCTTGGCCGCGCAAT
AAGTGTGACGAATTTTTCCGTCCAGCGCACGTACTTGCTGTGGCTGATGA
GTGAGGAGGGTGTCGCTTGCGTCCCCTTGAGCAAGCTTGGTCCCCGCTTT
ATTATCACTAAAATTCTGCCGGCTTTCAAGGAAATGAGCAACTTGAAGGA
CGACAGGCCAAAGCTTGGACGCTTCCTGGCGCGGGCCATTGTTGCGCAAG
AAGAGGATAATGGAGCGAGGCGGGAGGTGCTTGTGGCGGTGTTTGAGTAT
TGCAAGGATGTTGTGCGAGGCGCCGTGGTACGGCAGACACTGCTCGGGTT
TATAGAGTTCCGCGACGTCTTCCAGCAGACATCCCCTTGTCTGCAAATCG
ATGATGTAGAGCTGGCTCGTCTCCTCGTCTGTGTCATGAACTCACAATAC
AACCAAGGGCTCAGTCAAATATTAGCTGGGCGGATGGTGGATTGCTTGGA
GGTCTTTGCCGATTGTCAATCCCTCATTGCTGCTGGGCCTCACGGCGCCG
CCGTCGTGCGTACCTTCCTCTTAGACCTTCCGCAGAAAGTTGCATTGGAC
AGCCACTATAACCGTCTAGTTGAGTGGTTGGGGGTGTCGACAGTTGCGGG
CGGGGCCACAGGATGGTGGGGCGAGAGCACTACATCGGCCATCGAAGCTT
TGATAAACGGTAGTGGTGGTCACGGCAGTGGCGAGTTGACCATGGCAGCT
TCAGGAGGCTCTGTCTGGTCGTCTATGGAAGGGGGCCAGTGCTTGGAAAA
TGTTAATCAGTCGAGCATGGCATGCTGTGCTTTGGCTTGCATGTACTTGC
CGGATCTTGAGTTGGCACACGCCCTTGCTTCAGCTCTGCGGGTCCTGGGC
CGCATTCACTCTCATCCCTACTTGACCCTGCGGTCGTGTCTGGCTTCCCT
CTGTTTGCTGCGGTCACTGGGTTCCCTTTTGCGACGAAAGCACCGTCCGT
GTTTGTACGAGATTCTGCGGCAACACACAGGGGAAGTGGCCGAGTTTCTT
GCTGCCAAGCTTCAGGAGAGCTGCTTGTGTACCCGGGCCGACCTGTACGA
TAGTGGCAATTCAGGCGTATTTGGACTGTGCGTGCAGGCGTTTGGGACGG
TGATATGGCTGGCTGCGGATGTAGGGTAAGTGATCAGGCTTCATATGCTT
TTTTTTGGCCCTCTGACAGGGCATAATTATTCGTATCTCAGTTCATTTGC
CTTCACGATTCGTGGTCTTCACTCCATCTTTCCTCCACCTTGTCAACCCT
CCATCAGGCAAGTTGCCGGTGCTATCCAGCGTGTGCTGAAAACGTGTTCA
AGCGTGCTTAATGCTGGCGTGGATGATGCAGCGGCTGGTGATGCAGGGGA
AATTCGTCAGCTGGGGCGTGCAGTAGCCGTGCTGCGAAGCGTCCTGGAAG
CCCTCCTGCTGCAATCCAGCACGAGACTTTTTGGTGAAGTTAAATTGGAC
TGGGCTGCACGGCTTATGAGCAGCCTTGTCAAAGCCGCTGCCAGCTTGGG
CCTCCGACGAGGGAAGCGGGACTTTTTTTTGTCCGTGGCACTCGAGAATG
TATGGCGGTGCTTGGTTCTTCTTTACAAAATTCAACGCCAGGGCGGTTTG
GTGAAACCTACAGATAACCCTCTCCCCGTGGATATGGCATTTCTTTTTTC
CGCATTGGAGATGTCAAGCCGCAAATCGGTGCCCGATATTCTCTGCTGCA
TTAGCTGTCAACTTCCGTTTCACCTCGGCATATCCGACAGCAACGGCACG
GAGCAGGAACGACAAACGCGTCTCGACAACGTAGTCACGCTTGTGCTAGG
CTGCATTGAAGAATGTAACTACAGACAAAGTGTCATGCAACTTGCCATCG
AGATGGTGCTTTCGCCGGCCATACTCGCAGACCCCACCCTCTGTCGAGGA
ACAGATACCCCGGTGCGGCGTTTCTTTCATCGGCTTGTTGACCTCGGCAC
TGTCAAGCGGGCCTATATTCTTCTGAATGCCACGGCCAGGTTAACATCTA
TTTGGCGGACAGAACCGGCGGCTGCAGCACTTGCTGGGGAATTCGTAGAG
GAAATAGCGCAACTTTTGGTGCTTCGTGAGTTGGAAGAAGATGTGTACCA
GCAAGTGAATGAGGATGAGCGAGATTCCGAGCGAGATTCCGAGACAGACG
TCATCAGGGAGGAAATCAGAGAGCCCCAGGAAGAACACTCTGTCGCAGTG
CTTCGCATCTTGGTGCTTGGGTGTTTGTGCGATCTATTCCGACCACCAGA
TGATGGGGGAAAGGCCAAACAGGGCGAATTTTTGACCCCCCTTCTCACTC
GTTTGTTTGAAATAGCAGCTGCCGTAGATTTAAGAAGGGCTCAAATTCTG
ACTTCCCCCGACTACTCGTGCAAGCTTCGGGCGTGGCAAGCCATTTGCGT
GCTTGTGCCGTTTGTGAGGGCTGAGGATGCATCGCTGGTACAGGACTCGG
TATATGCAGCCATGCGTGTGGTGGCGGTACCCTCCATCCGTTTTTACCAA
GATACCGTTTTGGCGCTTGTCTGCCAAAAGTTTCCCGACGTGGCGATTCC
TTTCCTTGTGACGGCTTTGACCGACCTCCAAGTCCCGCCATTAACCAGCG
GCTCGTTCATTTCTGCGGCGGGTTTGGCTTGCTTGACCAAAAATACTGCT
TTCCCAGGTGGAGAGCTTCCACAAGACTACGTTGCCCCCCTGCTCCAAGC
CATCTTGCCGTGGATTTCAGGGCAACACGCAATTACGCGTATCGTCGCAC
AGCTCCTATCCTTTTATCTCTTGTCTCGGCTACCCACAGGAGATCTGGAT
GCGGTCAAAGCTGTGGAATCGGGTCAGAGCGGGAAAGGCGGAGTCAGCAA
CAGTAGAATCTCTGCTGGCAGTATTGACGCGACTTTCCTGAGTCAAACTT
TGAATTTCTTGAAAAACCACCGCGAGATAGCGAGCTTGCGCCGCAAAGCT
ATGCTGCGCTTCCAGGAAACTTCAGTACCCGCCTGCTGTACTGTATCACA
CCTTCTTGCCCAGCACTCGAATGAGCAAGGCGGTGTGCGTGACCTGGTGC
CGGAGCATGTAGAAGAGGTGCTGCGGGAAGCGATGACGTCTCTGTATCGA
GACCTGGAGGCAGAACACCACATGACTTACACATCCATAGCGCCCGTGGT
CCGAGGAGAAAATCTTTTTGAGCTTAAGCAAGACGCAAGTAGTGCCCGAG
CCTTGTTGCTAGAGGGGAATGCAGAGGCAGAGGCGGCCGACTGTTATTCG
CTACAAAAAAAGATTGTGGTCTCTGACGTGCTGACTTCACTTCTCCCGGC
TCCACCCACCGACAAATCCCAAAATACGCGAGGGGTTCTGCTGCAAGAGC
TCGTGGTGTGCGCGTCATTGCTGGAGCGGGTACCTAATGTAGCCGGCCTC
GCCCGAACATGCGAGATCTTCGCCGCATCCAAACTTATTATTCCCGACTT
GCGCATGCTCAAAGACCCGCTATTTGACCAAATTAGCAGCAGTGCGTGGA
AATGGATTCAGATGGAGGAGATCCATGAAGGGCACACTCGCGCCTTTCTT
CGGCGCTACAAACAGGAGGGTTACACGGTGGTGGGGCTCGAGCAAACAGA
CGACAGCTCGTGCCTCTCTAGGGTGGCTTTGCCTCGCAAGATGCTCTTGC
TTTTGGGCCGCGAGAAGGAGGGCATTCCCGTTCCACTGCTTCAAGAGTTG
GATTTGGTTGTGCAGATTCCTCAGCTGGGTCTAGTGAGGAGTTTAAATGT
GCACGTGAGCGCGTCTCTCATTGTATGGGAGTATTTTAAGCAGCATCGCA
AAAGCTGCGGTAAGGACCAACAATGGTAGATTAGAACTAATTGAAATCAT
CAAAGTACAATGCATGTATTGTCCTAG back to topCoding sequence (CDS) from alignment at chr1:881746..887072+ >NO01G03380.1 ID=NO01G03380.1|Name=NO01G03380.1|organism=Nannochloropsis oceanica|type=CDS|length=4980bp|location=Sequence derived from alignment at chr1:881746..887072+ (Nannochloropsis oceanica)
ATGGCGCTTGGCCAGCAGCAGATGGAGAAGGGTGATCAGATGCTTGCGCT
GGCAGAGGGGGTGGCCAAGGCTGGGGAGGCTTCTACCTTGGGACTCAAGG
AGCGCCTCGCCCTTCTCAATGCTCTCAGCAGCAGTATCACCACCAACCGT
CGCACCATGCGCCTCATCCCGGAGGATCTAGACCTGGGAGAGGGCTCCGC
GGATGCTCTTTTGCTTCATGTCAACGCAGTGGAGCTCTTGCTGGCAGCTG
GGCGAGAAGAGGTCGGCAGCAATGACGAAGACGCGTGGGGGACCGTGGTG
TCATTGTGGATCGAGAGGGTGGGACTTCCCATTCTTACCTCTCGGCGTCT
GGACCTTGGTCCCGCACAGAATGAAATAGGCATGCGTATAGGTCGTCTAT
TGGCATCGACAAGCAGTGAAGCGATACAACAAGCCATGCAGGCAGCAACA
TTGCATGTGCTTGACGATATGAGCGTGCGCGTGTCCTGTCCACGGGCAGA
CAAAGACGGCGGGGAGCTGCTGGAGGTGATTAGTGCTCAAGCTGGATGGG
TTGCTTCTTTCTTAAATCAAGGTGCACAAGATGTTGATACATTCCCACTT
GCTGTACTCGAGCGCACACTTGTAAACTTGGAAAGATGTCCGGCGCCTGC
GCTACGGTCGATTATTGTGAGGGTCGTGTCGCCTGCCTTGGCGAGTATGC
TGCAAGGCAAGGAAAATAATGCGGCAGCACACGTGATAAATTCTAAGGTC
TGGGGATTTGTACGACGACTTGATGTGGAAGGGGGCTTGGAAGAGCAGCG
AGATGCCCTTGCGATGCTCTGCGTCTTACAAGAAGTCCTTGTCCCTGCGC
TCGGCCTCAATCGGTCTGACCCTACCTTCTGGACTATGCTTCGACGCGGA
CTCGCCAGCGACTGCAACGCGGTTCGTAAGCGTGCCTTGTACGTACTAAG
CGCCCAGGTAGAGATGGCCAAAACTGTCGGTGCTGTTTCTACCGGTGCTG
GTGCCACGGCCCATTTTCCTGCTTCTGCTTCGTCTCCTCTTAAGGTCAAG
TTCCTCACCTGGTGGCGACGCTTTGTCCAAGTCATGGACACATTCAATAC
GGCTCTTGAAACACATCTCCTGAATCAAGCTCTACCTGTCTGTACGTCAT
TGCTGCGTGAGGCTTTTGCGTTCACCGGGAACGAGGAAGAGGAAGGGCAG
GATGGCATGCTCAACGGCAACGCGGCCTCTTTGCTCCCTCTACCTTCGTT
TGGATGGGCAGAGGCGCTTCTTGGCCGCGCAATAAGTGTGACGAATTTTT
CCGTCCAGCGCACGTACTTGCTGTGGCTGATGAGTGAGGAGGGTGTCGCT
TGCGTCCCCTTGAGCAAGCTTGGTCCCCGCTTTATTATCACTAAAATTCT
GCCGGCTTTCAAGGAAATGAGCAACTTGAAGGACGACAGGCCAAAGCTTG
GACGCTTCCTGGCGCGGGCCATTGTTGCGCAAGAAGAGGATAATGGAGCG
AGGCGGGAGGTGCTTGTGGCGGTGTTTGAGTATTGCAAGGATGTTGTGCG
AGGCGCCGTGGTACGGCAGACACTGCTCGGGTTTATAGAGTTCCGCGACG
TCTTCCAGCAGACATCCCCTTGTCTGCAAATCGATGATGTAGAGCTGGCT
CGTCTCCTCGTCTGTGTCATGAACTCACAATACAACCAAGGGCTCAGTCA
AATATTAGCTGGGCGGATGGTGGATTGCTTGGAGGTCTTTGCCGATTGTC
AATCCCTCATTGCTGCTGGGCCTCACGGCGCCGCCGTCGTGCGTACCTTC
CTCTTAGACCTTCCGCAGAAAGTTGCATTGGACAGCCACTATAACCGTCT
AGTTGAGTGGTTGGGGGTGTCGACAGTTGCGGGCGGGGCCACAGGATGGT
GGGGCGAGAGCACTACATCGGCCATCGAAGCTTTGATAAACGGTAGTGGT
GGTCACGGCAGTGGCGAGTTGACCATGGCAGCTTCAGGAGGCTCTGTCTG
GTCGTCTATGGAAGGGGGCCAGTGCTTGGAAAATGTTAATCAGTCGAGCA
TGGCATGCTGTGCTTTGGCTTGCATGTACTTGCCGGATCTTGAGTTGGCA
CACGCCCTTGCTTCAGCTCTGCGGGTCCTGGGCCGCATTCACTCTCATCC
CTACTTGACCCTGCGGTCGTGTCTGGCTTCCCTCTGTTTGCTGCGGTCAC
TGGGTTCCCTTTTGCGACGAAAGCACCGTCCGTGTTTGTACGAGATTCTG
CGGCAACACACAGGGGAAGTGGCCGAGTTTCTTGCTGCCAAGCTTCAGGA
GAGCTGCTTGTGTACCCGGGCCGACCTGTACGATAGTGGCAATTCAGGCG
TATTTGGACTGTGCGTGCAGGCGTTTGGGACGGTGATATGGCTGGCTGCG
GATGTAGGGCAAGTTGCCGGTGCTATCCAGCGTGTGCTGAAAACGTGTTC
AAGCGTGCTTAATGCTGGCGTGGATGATGCAGCGGCTGGTGATGCAGGGG
AAATTCGTCAGCTGGGGCGTGCAGTAGCCGTGCTGCGAAGCGTCCTGGAA
GCCCTCCTGCTGCAATCCAGCACGAGACTTTTTGGTGAAGTTAAATTGGA
CTGGGCTGCACGGCTTATGAGCAGCCTTGTCAAAGCCGCTGCCAGCTTGG
GCCTCCGACGAGGGAAGCGGGACTTTTTTTTGTCCGTGGCACTCGAGAAT
GTATGGCGGTGCTTGGTTCTTCTTTACAAAATTCAACGCCAGGGCGGTTT
GGTGAAACCTACAGATAACCCTCTCCCCGTGGATATGGCATTTCTTTTTT
CCGCATTGGAGATGTCAAGCCGCAAATCGGTGCCCGATATTCTCTGCTGC
ATTAGCTGTCAACTTCCGTTTCACCTCGGCATATCCGACAGCAACGGCAC
GGAGCAGGAACGACAAACGCGTCTCGACAACGTAGTCACGCTTGTGCTAG
GCTGCATTGAAGAATGTAACTACAGACAAAGTGTCATGCAACTTGCCATC
GAGATGGTGCTTTCGCCGGCCATACTCGCAGACCCCACCCTCTGTCGAGG
AACAGATACCCCGGTGCGGCGTTTCTTTCATCGGCTTGTTGACCTCGGCA
CTGTCAAGCGGGCCTATATTCTTCTGAATGCCACGGCCAGGTTAACATCT
ATTTGGCGGACAGAACCGGCGGCTGCAGCACTTGCTGGGGAATTCGTAGA
GGAAATAGCGCAACTTTTGGTGCTTCGTGAGTTGGAAGAAGATGTGTACC
AGCAAGTGAATGAGGATGAGCGAGATTCCGAGCGAGATTCCGAGACAGAC
GTCATCAGGGAGGAAATCAGAGAGCCCCAGGAAGAACACTCTGTCGCAGT
GCTTCGCATCTTGGTGCTTGGGTGTTTGTGCGATCTATTCCGACCACCAG
ATGATGGGGGAAAGGCCAAACAGGGCGAATTTTTGACCCCCCTTCTCACT
CGTTTGTTTGAAATAGCAGCTGCCGTAGATTTAAGAAGGGCTCAAATTCT
GACTTCCCCCGACTACTCGTGCAAGCTTCGGGCGTGGCAAGCCATTTGCG
TGCTTGTGCCGTTTGTGAGGGCTGAGGATGCATCGCTGGTACAGGACTCG
GTATATGCAGCCATGCGTGTGGTGGCGGTACCCTCCATCCGTTTTTACCA
AGATACCGTTTTGGCGCTTGTCTGCCAAAAGTTTCCCGACGTGGCGATTC
CTTTCCTTGTGACGGCTTTGACCGACCTCCAAGTCCCGCCATTAACCAGC
GGCTCGTTCATTTCTGCGGCGGGTTTGGCTTGCTTGACCAAAAATACTGC
TTTCCCAGGTGGAGAGCTTCCACAAGACTACGTTGCCCCCCTGCTCCAAG
CCATCTTGCCGTGGATTTCAGGGCAACACGCAATTACGCGTATCGTCGCA
CAGCTCCTATCCTTTTATCTCTTGTCTCGGCTACCCACAGGAGATCTGGA
TGCGGTCAAAGCTGTGGAATCGGGTCAGAGCGGGAAAGGCGGAGTCAGCA
ACAGTAGAATCTCTGCTGGCAGTATTGACGCGACTTTCCTGAGTCAAACT
TTGAATTTCTTGAAAAACCACCGCGAGATAGCGAGCTTGCGCCGCAAAGC
TATGCTGCGCTTCCAGGAAACTTCAGTACCCGCCTGCTGTACTGTATCAC
ACCTTCTTGCCCAGCACTCGAATGAGCAAGGCGGTGTGCGTGACCTGGTG
CCGGAGCATGTAGAAGAGGTGCTGCGGGAAGCGATGACGTCTCTGTATCG
AGACCTGGAGGCAGAACACCACATGACTTACACATCCATAGCGCCCGTGG
TCCGAGGAGAAAATCTTTTTGAGCTTAAGCAAGACGCAAGTAGTGCCCGA
GCCTTGTTGCTAGAGGGGAATGCAGAGGCAGAGGCGGCCGACTGTTATTC
GCTACAAAAAAAGATTGTGGTCTCTGACGTGCTGACTTCACTTCTCCCGG
CTCCACCCACCGACAAATCCCAAAATACGCGAGGGGTTCTGCTGCAAGAG
CTCGTGGTGTGCGCGTCATTGCTGGAGCGGGTACCTAATGTAGCCGGCCT
CGCCCGAACATGCGAGATCTTCGCCGCATCCAAACTTATTATTCCCGACT
TGCGCATGCTCAAAGACCCGCTATTTGACCAAATTAGCAGCAGTGCGTGG
AAATGGATTCAGATGGAGGAGATCCATGAAGGGCACACTCGCGCCTTTCT
TCGGCGCTACAAACAGGAGGGTTACACGGTGGTGGGGCTCGAGCAAACAG
ACGACAGCTCGTGCCTCTCTAGGGTGGCTTTGCCTCGCAAGATGCTCTTG
CTTTTGGGCCGCGAGAAGGAGGGCATTCCCGTTCCACTGCTTCAAGAGTT
GGATTTGGTTGTGCAGATTCCTCAGCTGGGTCTAGTGAGGAGTTTAAATG
TGCACGTGAGCGCGTCTCTCATTGTATGGGAGTATTTTAAGCAGCATCGC
AAAAGCTGCGGTAAGGACCAACAATGGTAG back to top
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