NO01G01460, NO01G01460 (gene) Nannochloropsis oceanica

Overview
NameNO01G01460
Unique NameNO01G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1575
Alignment locationchr1:371595..373169 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:371595..373169 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO01G01460 vs. NCBI_GenBank
Match: EWM29101.1 (short-chain dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 601.7 bits (1550), Expect = 2.100e-168
Identity = 306/435 (70.34%), Postives = 349/435 (80.23%), Query Frame = 0
Query:    2 LLSCSAAFSQLEALYLAGGLASLYAILVGLWRWGTYEARTPETYVPLAGLAVAPLLPFLPLALFVEKGKTGAIFG-VVTAVLLGWDGFIIHRIWRQFVVGPRFETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGG----KVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLATPAAGTEPVAMAA 432
            ++  S   S L  + +  G+A LYA+LVGLWRW TYEART ETY+ LA LA APLLP         K   G  +  ++ A+LLGWD +++HRIWR FVVGPRF++VDL GK AIVTGANTGIGRETSR LAEMGA+VILACRS+ RAEEAIR IL E+G+KI P QLEFW LDVSSLQSVGDFAA FQE+ G  GLDILINNAGVMLNE+ +TSEGLEAT+ATNH+GHFLLTLLLFPELEKVSDGR+VNVSSSLHK P +FNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRL+ LQ + A  +GR+G R GG     +V+TANAVHPGNVQTEVARNM W  YWGQR+CSP+LWCFSKNP QGAYTSVH AT+P+LRG+GG +FVN + T DVSAVA+DP VA RLW MSE  CGL T A G   V  ++
Sbjct:   10 MMPLSTDVSPLNVVCVGSGIAFLYAVLVGLWRWCTYEARTAETYLRLAALAAAPLLPLCMFVFTSHKSLEGCKWHLLLAALLLGWDAYVLHRIWRNFVVGPRFQSVDLHGKVAIVTGANTGIGRETSRFLAEMGAKVILACRSKDRAEEAIRAILWESGSKIKPSQLEFWPLDVSSLQSVGDFAAAFQEKAGHKGLDILINNAGVMLNERRLTSEGLEATLATNHFGHFLLTLLLFPELEKVSDGRVVNVSSSLHKVPRAFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLEVLQSNEANKVGRKGERGGGDLAVRRVVTANAVHPGNVQTEVARNMPWYLYWGQRICSPILWCFSKNPAQGAYTSVHVATSPALRGIGGKFFVNCDVTGDVSAVARDPSVAGRLWAMSEEACGL-TAATGDATVGSSS 443          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: CBJ25710.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 220.3 bits (560), Expect = 1.300e-53
Identity = 152/410 (37.07%), Postives = 225/410 (54.88%), Query Frame = 0
Query:   21 LASLYAILVGLWRWGTYEARTPETYVPLAGLAVAPLLPFLPLALFVEKGKTGAIFGVVTAVLLGWDGFIIHRIWRQFVVGPRFETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVI---LKEAGTKID-------PCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLR--------GVGGLYFVNSEATADVSAVAKDPQVAERLWEMSE 413
            +A+ Y +++G+++  T EA   +  +    LA   L     +    E   + ++  +   ++       + R + +FV G    +V++ GK  I+TG+NTG+G ET++ L  MGA VI+ACRS  +A +AI  I   L+ A   I          +L F  LD+SSL +V  F A F+  K   GLD LI NAGVM   + VT EGLEA +A N+ G+FLLT  L P L++  DGR++ V+SSLHK P +F F+DP+++   Y++F AY  SKLA ++F  ELQ+RL+   R+++ +I               N+ +PG V T ++R+M W    G  +  P L  F K+P  GA+TSV AAT P LR        GVGGLY  +    A   AVA D +  + LW++SE
Sbjct:   15 VAASYVVVLGMFKLATKEASDRDYGLFQLLLATLGLAQLASMMSNHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKARKAIEDITFELEAAAKAIRHNTDTGIKGKLTFMKLDLSSLAAVRVFVAEFKASK--LGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKKPEAFRFEDPMFDRD-YNMFKAYANSKLALLMFAEELQQRLN---REKSTVI--------------VNSANPGIVMTGISRDMGWFLRVGHEVFKPFLKLFLKHPKAGAFTSVFAATTPQLRKSTEDGAPGVGGLYMSDCAPQAFNPAVAVD-KSRKDLWKLSE 403          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: EKC38323.1 (Retinol dehydrogenase 12 [Crassostrea gigas])

HSP 1 Score: 218.4 bits (555), Expect = 5.000e-53
Identity = 134/326 (41.10%), Postives = 188/326 (57.67%), Query Frame = 0
Query:   93 IWRQFVVGPR-FETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGL 418
            ++R++  G R      L GKT I+TGANTGIG+ET+  LA  GA+VILACR ++R E A+  ++K  G+K    Q+   +LD++SL+SV  FA      K +  +DIL+NNAGVM+   M TS+G E    TNH GHFLLT LL  ++++ +  RI+NVSS  H   T  ++ D + +  +YS   AY QSKLAN+LF+ EL RRL                    G  +T N++HPG+V TE+ R     ++ G  +  P L  F K+P +GA T++H A   SL  V G YF +  A    S  A+D + A+ LWEMS  + GL
Sbjct:  271 VFRRWKAGGRCLSKARLDGKTVIITGANTGIGKETAVDLANRGARVILACRDKSRGENALADVIKRTGSK----QVVLKSLDLASLESVRKFAQ--DINKTESRIDILLNNAGVMMCPYMKTSDGFEMQFGTNHLGHFLLTNLLLEKIKRSAPARIINVSSLAHTFTTKIDY-DKIKDEKSYSRIEAYAQSKLANILFSRELSRRLQ-------------------GTGVTVNSLHPGSVATELGR-----YFPGFTILYPTLSLFFKSPWEGAQTNIHCAVEESLENVTGKYFSDC-AVVQESKAARDDEAAKSLWEMSAKMVGL 564          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_011420247.1 (PREDICTED: retinol dehydrogenase 12-like [Crassostrea gigas])

HSP 1 Score: 218.4 bits (555), Expect = 5.000e-53
Identity = 134/326 (41.10%), Postives = 188/326 (57.67%), Query Frame = 0
Query:   93 IWRQFVVGPR-FETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGL 418
            ++R++  G R      L GKT I+TGANTGIG+ET+  LA  GA+VILACR ++R E A+  ++K  G+K    Q+   +LD++SL+SV  FA      K +  +DIL+NNAGVM+   M TS+G E    TNH GHFLLT LL  ++++ +  RI+NVSS  H   T  ++ D + +  +YS   AY QSKLAN+LF+ EL RRL                    G  +T N++HPG+V TE+ R     ++ G  +  P L  F K+P +GA T++H A   SL  V G YF +  A    S  A+D + A+ LWEMS  + GL
Sbjct:   27 VFRRWKAGGRCLSKARLDGKTVIITGANTGIGKETAVDLANRGARVILACRDKSRGENALADVIKRTGSK----QVVLKSLDLASLESVRKFAQ--DINKTESRIDILLNNAGVMMCPYMKTSDGFEMQFGTNHLGHFLLTNLLLEKIKRSAPARIINVSSLAHTFTTKIDY-DKIKDEKSYSRIEAYAQSKLANILFSRELSRRLQ-------------------GTGVTVNSLHPGSVATELGR-----YFPGFTILYPTLSLFFKSPWEGAQTNIHCAVEESLENVTGKYFSDC-AVVQESKAARDDEAAKSLWEMSAKMVGL 320          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_016957870.1 (PREDICTED: retinol dehydrogenase 13-like [Drosophila biarmipes])

HSP 1 Score: 213.8 bits (543), Expect = 1.200e-51
Identity = 146/344 (42.44%), Postives = 191/344 (55.52%), Query Frame = 0
Query:   82 LLGWDGFIIHRIW--RQFVVGPRF-ETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPF---YWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLAT 420
            LL W   I   ++  R+++ G +F +  D  GK  IVTGANTGIG+ET+  +A+ G  V LACR   R E+A + I++E+        +    LD+SSL S+  FAA F  +K    L +LINNAGVM   K +T +G E  +  NH GHFLLT LL   L+K +  RIVNVSS  H    S N DD L    +YS  GAY QSKLANVLFT EL +RL+                   G  +T N++HPG V TE+ RN  W F    + + L  PL W   K P  GA T+++AA  P+L+ V GLYF + +   DVSA AKD +  + LW  SE   G+ T
Sbjct:   11 LLFWPALIGGAVYFLRKYMQGGQFTKQTDETGKVFIVTGANTGIGKETALEIAKRGGTVYLACRDMNRCEKARQDIVRESNN----TNIFARELDLSSLDSIRKFAAGF--KKEQDKLHVLINNAGVMHCPKALTKDGFEMQLGVNHMGHFLLTHLLLDVLKKTAPSRIVNVSSLAH-TQGSINIDD-LNSEKSYSRIGAYSQSKLANVLFTRELAKRLE-------------------GTGVTTNSLHPGAVDTELTRN--WKFLENIFARSLVRPLQWVLFKTPRNGAQTTLYAALDPALKEVSGLYFSDCK-PKDVSAAAKDEKTGKFLWAESEKWTGVNT 324          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_002109109.1 (hypothetical protein TRIADDRAFT_37121 [Trichoplax adhaerens] >EDV29907.1 hypothetical protein TRIADDRAFT_37121 [Trichoplax adhaerens])

HSP 1 Score: 213.4 bits (542), Expect = 1.600e-51
Identity = 132/312 (42.31%), Postives = 180/312 (57.69%), Query Frame = 0
Query:  108 LRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMA-WPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLA 419
            L  KT I+TG NTGIG+ T+  LA+ GA+VILACRS ++ +EA+  I++++G      ++ F  LD++SLQSV DFA    E+  +  +DIL+NNAG+M+     T +G E  + TNH+GHFLLT LL  +L+  +  RI+NVSS  H      NFDD +     Y    AY QSKLANVLFT EL +RL                    G  +TAN++HPG V TE+ R+ +   F +   L +PL+W   K P QGA TS+  A   SL GV G YF +       +  A D  VA+RLW +SE + GL+
Sbjct:   36 LHHKTVIITGGNTGIGKATAIDLAQRGARVILACRSESKGKEAVEDIIQQSGNS----EVIFCPLDLASLQSVRDFADYVNEK--EDRVDILLNNAGIMMCPYSKTQDGFEMQIGTNHFGHFLLTNLLLDKLKTCAPSRIINVSSLAH-TMGKINFDD-INSEKGYGSVAAYSQSKLANVLFTRELAKRLQ-------------------GTAVTANSLHPGAVDTELQRHFSVRKFSFLNSLITPLIWLGFKTPKQGAQTSIFCAVDESLEGVSGKYFSDCREKT-CAKQAYDDDVAKRLWHLSEELTGLS 319          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_022322717.1 (uncharacterized protein LOC111124146 [Crassostrea virginica])

HSP 1 Score: 213.0 bits (541), Expect = 2.100e-51
Identity = 139/364 (38.19%), Postives = 198/364 (54.40%), Query Frame = 0
Query:   63 ALFVEKGKTGAIFGVVTAVLLGWDGFIIHR--------IWRQFVVGPR-FETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGL 418
            ++F ++G   A+   +  +L  +   I+          ++R+++ G R   T  L GKT I+TGANTGIG+ET+  LA  GA+VILACR R R E A+  +++ +G      Q+    LD++S +SV  FA      K +  +DILINNAGVM+   M TS+G E    TNH GHFLLT LL  +++  +  RI+NVSS  H       + D + E  +YS   AY QSKLANVLF+ EL ++L                    G  +T N++HPG+V TE+AR     ++ G  +  P L  F K+P +GA T++H A   SL  V G YF +  A  + S  A+D + A  LWEMS  + GL
Sbjct:  331 SIFFKRGNLAAVMEDLLGILTEYQTIIVCLVVTVVTLVVFRRWMGGGRCHSTARLDGKTVIITGANTGIGKETAVDLAGRGARVILACRDRKRGETALSDVIRRSGNP----QVILKILDLASFESVRKFAQ--DVNKTESRIDILINNAGVMMCPYMKTSDGFEMQFGTNHLGHFLLTNLLLDKIKGSAPSRIINVSSLAHTFTKGIEY-DKMKEEKSYSRLEAYSQSKLANVLFSRELSKKLQ-------------------GTGVTVNSLHPGSVATELAR-----YFPGYSVLYPCLGLFLKSPWEGAQTNIHCAVEESLENVSGKYFSDC-AVKEESKPAQDDEAARALWEMSVKMVGL 662          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_016957854.1 (PREDICTED: retinol dehydrogenase 13-like [Drosophila biarmipes])

HSP 1 Score: 212.2 bits (539), Expect = 3.600e-51
Identity = 142/317 (44.79%), Postives = 179/317 (56.47%), Query Frame = 0
Query:  107 DLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQR----LCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLAT 420
            D  GK  IVTGANTGIG+ET+  +A+ G  V L CR  +R E+A + I++E+       ++    LD+SSL+S+  FAA F  +K    L +LINNAGVM   K +T +G E  +  NH GHFLLT LL   L+K +  RIVNVSS  H    S N DD L    +YS  GAY QSKLANVLFT EL RRL+                   G  +T + +HPG V TE+ RN  W F WG+     L  PL W F K P  GA T+++AA  P L G+ GLYF + +   DVSA AKD   A+ LW  SE   G+ T
Sbjct:   11 DETGKVFIVTGANTGIGKETALEIAKRGGTVYLVCRDMSRCEKACQDIVRESKNP----KVFGRLLDLSSLESIRKFAAGF--KKEQDKLHVLINNAGVMHCPKTLTKDGFEMHLGVNHMGHFLLTHLLLDVLKKTAPSRIVNVSSLAH-TQGSINIDD-LNSEKSYSRIGAYSQSKLANVLFTRELARRLE-------------------GTGVTTSCLHPGVVDTELTRN--WNF-WGKPIAKILVKPLQWTFYKTPRSGAQTTLYAALDPELDGISGLYFSDCK-LKDVSAAAKDESTAKFLWAESEKWTGVNT 296          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_002108397.1 (hypothetical protein TRIADDRAFT_19714 [Trichoplax adhaerens] >EDV29195.1 hypothetical protein TRIADDRAFT_19714 [Trichoplax adhaerens])

HSP 1 Score: 211.1 bits (536), Expect = 7.900e-51
Identity = 134/312 (42.95%), Postives = 183/312 (58.65%), Query Frame = 0
Query:  108 LRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAW-PFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLA 419
            L  KT ++TG NTGIG+ET+  LA+ GA++ILACRS ++   A++ I++ +G+      + F  LD++SLQSV DFA  F   K +  LDILINNAGVM    M T++GLE    TNH GHFLLT LL  +L+  +  RIV VSS  H+     NFDD L     Y+ + AY QSKLAN+LFT EL +RL                    G  +TAN++HPG V T++ R+++     +   L +PL W F K   QGA TS++ A   SL GV G YF +     D +A  +D   A++LWE+SE + GL+
Sbjct:   36 LDNKTVVITGGNTGIGKETAIDLAQRGARIILACRSESKGTTAVKEIIESSGSS----NIVFRKLDLASLQSVRDFANQF--NKNEDRLDILINNAGVMWCPYMETADGLEMQFGTNHIGHFLLTNLLLDKLKACAPSRIVVVSSIGHRG-GKMNFDD-LNGKKNYNSYTAYFQSKLANILFTRELAKRLQ-------------------GTGVTANSLHPGAVNTDLGRHLSVNQNGFLHALIAPLYWLFVKTSKQGAQTSIYCAVDESLNGVSGKYFADCR-EKDCAAQGRDDGAAKKLWEISEEMTGLS 319          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_016989790.1 (PREDICTED: retinol dehydrogenase 13 [Drosophila rhopaloa])

HSP 1 Score: 210.7 bits (535), Expect = 1.000e-50
Identity = 143/330 (43.33%), Postives = 185/330 (56.06%), Query Frame = 0
Query:   95 RQFVVGPRF-ETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEA-GTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFY---WGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLAT 420
            R+++ G +F +  D  GK  IVTGANTGIG+ET   +A  G  V +ACR   R E+A + I++E   T I   Q     LD+SSL+S+  FAA F+  +    L +LINNAGVM   K +T +G E  +  NH GHFLLT LL   L+K +  RIVNVSS  H    S N DD L    +YS  GAY QSKLANVLFT EL  RL                    G  +T N++HPG V TE+ RN  W F    + + L  PLLW   K P  GA T+++AA  P+L+ V GLYF + +   DV+A A+D +  + LWE SE   G+ T
Sbjct:   27 RKYMQGGQFTKQTDESGKVFIVTGANTGIGKETVLEIARRGGTVYMACRDMNRCEKARQEIVRETNNTNIFARQ-----LDLSSLESIRKFAASFKNEQDK--LHVLINNAGVMHCPKSLTKDGFEMQLGVNHMGHFLLTHLLLDVLKKTAPSRIVNVSSLAH-TQGSINVDD-LNSEKSYSRIGAYSQSKLANVLFTRELANRLK-------------------GTGVTTNSLHPGAVDTELLRN--WKFLENSFVKYLVGPLLWTLFKTPKMGAQTTLYAALDPALKEVSGLYFSDCQ-PKDVAAAAEDEKTGKFLWEESEKWTGVNT 325          
The following BLAST results are available for this feature:
BLAST of NO01G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29101.12.100e-16870.34short-chain dehydrogenase [Nannochloropsis gaditan... [more]
CBJ25710.11.300e-5337.07conserved unknown protein [Ectocarpus siliculosus][more]
EKC38323.15.000e-5341.10Retinol dehydrogenase 12 [Crassostrea gigas][more]
XP_011420247.15.000e-5341.10PREDICTED: retinol dehydrogenase 12-like [Crassost... [more]
XP_016957870.11.200e-5142.44PREDICTED: retinol dehydrogenase 13-like [Drosophi... [more]
XP_002109109.11.600e-5142.31hypothetical protein TRIADDRAFT_37121 [Trichoplax ... [more]
XP_022322717.12.100e-5138.19uncharacterized protein LOC111124146 [Crassostrea ... [more]
XP_016957854.13.600e-5144.79PREDICTED: retinol dehydrogenase 13-like [Drosophi... [more]
XP_002108397.17.900e-5142.95hypothetical protein TRIADDRAFT_19714 [Trichoplax ... [more]
XP_016989790.11.000e-5043.33PREDICTED: retinol dehydrogenase 13 [Drosophila rh... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008215NSK008215Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01460.1NO01G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576293gene_122Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01460.1NO01G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01460 ID=NO01G01460|Name=NO01G01460|organism=Nannochloropsis oceanica|type=gene|length=1575bp
ATGTTGCTATCTTGCTCTGCCGCCTTCTCCCAGCTCGAAGCGCTTTACCT
GGCGGGAGGGCTCGCCTCTCTGTACGCTATCTTGGTAGGGCTTTGGCGCT
GGGGCACCTATGAGGCGAGGACTCCCGAAACCTACGTGCCTTTGGCCGGC
TTGGCTGTCGCGCCGCTCCTCCCGTTCCTGCCTCTGGCTTTGTTTGTAGA
GAAAGGAAAGACTGGAGCCATTTTTGGGGTAGTGACAGCGGTGCTCTTGG
GATGGGATGGTTTCATCATCCATCGCATCTGGCGTCAGTTTGTGGTTGGA
CCGCGCTTCGAGACCGTGGACCTGCGTGGGAAAACGGCTATCGTAACAGG
CGCCAACACAGGAATCGGACGGGAGACATCGCGCTGTCTAGCAGAGATGG
GTGCACAGGTCATTTTGGCGTGTCGATCGCGGGCGCGGGCGGAGGAGGCC
ATTCGTGTGATTTTGAAGGAGGCAGGAACTAAAATTGACCCTTGTCAACT
AGAGTTCTGGACACTGGACGTGAGCAGCTTGCAGTCTGTGGGAGACTTTG
CGGCAATCTTCCAGGAGAGAAAAGGGGATGGCGGACTGGATATTTTGATT
AACAATGCAGGGGTGATGCTCAATGAGAAGATGGTAACGTCGGAAGGCTT
GGAAGCAACGATGGCGACTAACCATTATGGGCACTTCCTCCTGACTTTAC
TACTCTTCCCAGAGCTAGAAAAAGTTTCAGATGGACGCATCGTTAATGTC
TCCTCCAGCTTGCACAAGGCACCGACTTCCTTTAATTTTGACGATCCTCT
TTATGAGTCCAGCGCGTATAGCCTCTTTGGTGCTTATGGGCAGAGCAAGT
TAGCCAATGTTTTGTTCACTTTCGAATTACAACGACGCTTAGACGCACTA
CAACGGGATCGGGCCAAGATTATCGGAAGGCGAGGGGGAAGAGATGGAGG
AGGGAAGGTGATGACGGCCAACGCCGTACATCCAGGGAATGTCCAGACAG
AGGTAGCCCGGAATATGGCATGGCCCTTTTATTGGGGTCAGCGATTGTGC
AGTCCTTTGTTGTGGTGTTTCTCGAAAAATCCATTGCAGGGTGCTTATAC
CTCTGTGCATGCTGCGACTGCCCCGAGTTTGAGGGGGGTGGGTGGGTTGT
ATTTTGTGAACAGTGAGGCGACAGCTGACGTGTCTGCTGTGGCGAAGGAT
CCGCAGGTTGCCGAGAGACTATGGGAGATGAGTGAGGGTGTGTGTGGCTT
GGCCACTCCCGCAGCAGGTACAGAGCCAGTAGCCATGGCGGCGGCACCAG
CCATAGCAAAGAAAAGCTCGCCGACGAGAAGGAGAAGGGAAAGCGTGAGT
GCCGGTGCCAACACACCTGGTAAAAAGGCGATGACGCCGAAGAAAAGTGA
TGTTGCGAATGGTGGGGGGAATGGTGGGCGGAAGAGCAAGTCCCCGGCAA
GGAGACGGAGTGGAAAAGTGAATTGACAAAAAGTGGGAAATGTTGGTGGT
GCTGGTGTCGAGGGGTGGAAGAAAAGAAAGCAGCAGTGCTTGTGTGGAAA
AGAAAAAGAGGGTAAATAAATCAAG
back to top

protein sequence of NO01G01460.1

>NO01G01460.1-protein ID=NO01G01460.1-protein|Name=NO01G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MLLSCSAAFSQLEALYLAGGLASLYAILVGLWRWGTYEARTPETYVPLAG
LAVAPLLPFLPLALFVEKGKTGAIFGVVTAVLLGWDGFIIHRIWRQFVVG
PRFETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEA
IRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILI
NNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNV
SSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDAL
QRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLC
SPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKD
PQVAERLWEMSEGVCGLATPAAGTEPVAMAAAPAIAKKSSPTRRRRESVS
AGANTPGKKAMTPKKSDVANGGGNGGRKSKSPARRRSGKVN*
back to top
Synonyms
Publications