NO01G01310, NO01G01310 (gene) Nannochloropsis oceanica

Overview
NameNO01G01310
Unique NameNO01G01310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1404
Alignment locationchr1:333440..334843 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:333440..334843 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01310.1NO01G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627628gene_107Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01310.1NO01G01310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01310 ID=NO01G01310|Name=NO01G01310|organism=Nannochloropsis oceanica|type=gene|length=1404bp
ATGGCAACAGCCAGCACCAAGGCTGCTTTGCCCCCGAATCCAAATCCCCC
CGATGAGGAAGCTTTGCCGTCACCAAGCAGAGGCAAGGAGCATGAGCTTG
AGCAGGAGCAGCAGGAGCAGCAGGAGCGCACAATCGCATTGCTGGCTGCC
AACCCAACCTTCCGCCAACACGTGGACGCCGCTTTACAGGCTGAGTTCAA
GCGCCAGGCTCACTTGACTGCTATGCGCATCCTGGCCGAGAACAGTTCGG
CTCAGACCTGTCGAAGACAGCTGAAAGAGGAGGAGGCAGAGGAGAAGACG
GAACCTCAACCCTCCTCCCTTGCACTATCGATCCCTCCTCTCTCCTCCAG
CCATCCATCTCCTTCCCTATTTCCTGCCAGTAGAGTTAACGACGTAGgta
acgacaagcagaagcaggagcaacgacagatcctgaagactgtggccgaa
aaatacagtgcaagccgctctcgttccccctcggcaaaggacacccaccg
tttgcacgatcatgacagGAGTGATAGCCAGAAGGGAAGGAGGGGAAGCA
GGAGCAGGAACAGATTCAGGAGTCCCTTTGGAAAGAGAAGGAGCAGAAGC
TTCGAAAAGAGAAGGGATCGAAGCAGGGGCAGAGATTACGAAAAGCACCA
AGCACGCAGCCGCAGCCGCAGCAGGAGCAGTAGCCGCAGTCGTGCCCTTC
GTCGTGGATATTCGCCTCCTCCATCTCCCCGTCATAGTCACCCATGGCAC
GAGCGAGGCCAAATGCAAGGAAGAAGGGTATCGTGGGGGGGAAGGTGTAG
CCGCAGGCGCAGCCGGAGTTGGGAGAGGGGGAGGACCAGGGGTAGGgtca
gatcaccctcccgttctctgccgcggtcacgggaggagggagatgattct
ttcgtccgtgtcggtgggtggtatggccgggagaaaagGCTGGATATGTG
TGGACCTGGCGGTGAAATAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGC
GGACGAGGGGTGAGGAAGAAGGACAAGGAGGGGTAGGAAGAAGAGGAGGA
AGTGTGCTGAAGGAGGAGGGAATGGGAGAGGGTCAGAAGAAGGGAAGAAA
TGACGCAGTGCTGAAGCAAGTAAAACGGCAAGAGGGAGTGGAGAAGGAGA
AACAGGTCCTTCCGTCCGTGGAGATGAAGGAGGAAGGAGGAAAGAAGAGG
AGATACGGGGAAGAGGATTTGTTGGCAGTCGCATGTAAATCGCTTAAAGC
CCCCGAAAATGAGAAAAATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAAAAGGAGGAGGAGGAGAAGAAGGAGAAGGAG
AAGGAGAAGGAGAAGAAGAAGGAGAAGCCCAAGAAGGAGAAGAAACACAA
ATAG
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protein sequence of NO01G01310.1

>NO01G01310.1-protein ID=NO01G01310.1-protein|Name=NO01G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=397bp
MATASTKAALPPNPNPPDEEALPSPSRGKEHELEQEQQEQQERTIALLAA
NPTFRQHVDAALQAEFKRQAHLTAMRILAENSSAQTCRRQLKEEEAEEKT
EPQPSSLALSIPPLSSSHPSPSLFPASRVNDVGVIARREGGEAGAGTDSG
VPLEREGAEASKREGIEAGAEITKSTKHAAAAAAGAVAAVVPFVVDIRLL
HLPVIVTHGTSEAKCKEEGYRGGEGVAAGAAGVGRGGGPGVGLDMCGPGG
EIGGGGGGGGGGRTRGEEEGQGGVGRRGGSVLKEEGMGEGQKKGRNDAVL
KQVKRQEGVEKEKQVLPSVEMKEEGGKKRRYGEEDLLAVACKSLKAPENE
KNLKKKKKKKKKKKKKKKKKEEEEKKEKEKEKEKKKEKPKKEKKHK*
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Synonyms
Publications