NO01G00500, NO01G00500 (gene) Nannochloropsis oceanica

Overview
NameNO01G00500
Unique NameNO01G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1436
Alignment locationchr1:132033..133468 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:132033..133468 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO01G00500 vs. NCBI_GenBank
Match: XP_005855962.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20405.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 508.4 bits (1308), Expect = 1.900e-140
Identity = 260/360 (72.22%), Postives = 304/360 (84.44%), Query Frame = 0
Query:    1 MAMPLVLTLFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKK---DHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVITPSPAQKG 358
            MA   +++  +GVLLA GI L+ +L+LP V+YLISRK YPTL + +S  TLGG++VTGASTGIGRHAA YLA++GF+VFAGVRKPADGEALL A+  E+      S S+   + +K GVLH LILD+TK  QI AA+R+V+EEL+RRG LPFLGLVNNAGVTGGADPVE+LPL++NR  FEVN++GPLAVT+AFLPLLRQ PQGRI+NVSSMAG VTRPLGATYSCTKFALEALSDTLR+ELGHLGVSVSVIQPGYI SEIFGKA EQH  RMQELPEEC+ LYGHLY + K + L+AKASDP+VCS+AIHHALTS YP+TRY  GNVNGTPA  L WGIW+LNDRL+DR+ITP P +KG
Sbjct:    1 MASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGVLHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPEECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDRMITP-PFKKG 359          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: EWM28976.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 505.8 bits (1301), Expect = 1.200e-139
Identity = 260/360 (72.22%), Postives = 303/360 (84.17%), Query Frame = 0
Query:    1 MAMPLVLTLFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKK---DHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVITPSPAQKG 358
            MA   +++  +GVLLA GI L+ +L+LP V+YLISRK YPTL + +S  TLGG++VTGASTGIGRHAA YLA++GF+VFAGVRKPADGEALL A+  E+      S S+   + +K GVLH LILD+TK  QI AA+R+V+EEL+RRG LPFLGLVNNAGVTGGADPVE+LPL++NR  FEVN++GPLAVT+AFLPLLRQ PQGRIVNVSSMAG VTRPLGATYSCTKFALEALSDTLR+ELGHLGVSVSVIQPGYI SEIFGKA EQH  RMQELP EC+ LYGHLY + K + L+AKASDP+VCS+AIHHALTS YP+TRY  GNVNGTPA  L WGIW+LNDRL+DR+ITP P +KG
Sbjct:   12 MASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDRMITP-PFKKG 370          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: EWM28977.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 445.3 bits (1144), Expect = 2.000e-121
Identity = 231/320 (72.19%), Postives = 270/320 (84.38%), Query Frame = 0
Query:    1 MAMPLVLTLFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKK---DHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDPVVCSKAIHHALTSAYPR 318
            MA   +++  +GVLLA GI L+ +L+LP V+YLISRK YPTL + +S  TLGG++VTGASTGIGRHAA YLA++GF+VFAGVRKPADGEALL A+  E+      S S+   + +K GVLH LILD+TK  QI AA+R+V+EEL+RRG LPFLGLVNNAGVTGGADPVE+LPL++NR  FEVN++GPLAVT+AFLPLLRQ PQGRIVNVSSMAG VTRPLGATYSCTKFALEALSDTLR+ELGHLGVSVSVIQPGYI SEIFGKA EQH  RMQELP EC+ LYGHLY + K + L+AKASDP+VCS+AIHHALTS YP+
Sbjct:   12 MASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPK 331          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: XP_005853543.1 (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22812.1 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 260.4 bits (664), Expect = 9.000e-66
Identity = 152/350 (43.43%), Postives = 208/350 (59.43%), Query Frame = 0
Query:   17 VGIALVVLLI-----LPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKK-VDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVITPSPAQKGDVQ 361
            +GI    LL+     +P+++ L +R+ YP  P +      G +VVTGASTGIG HAA  LA+ GF+VFAGVRK  DGE L       K +  T ++         + P+ILDVTK  QI  A++TV   L   G  P +GLVNNAGV G   PVE+  +D  R+ F+VN+ G +A TKAFL LLR   +GR++N+SS+AG    P    Y  +K+ALEA SD LR+E+G LGVSVSV++P Y+ S IFGK   +  +    + E+   +YGHL          + KAS P V S AI HALT+ +P+TRY   NV+G  A ++ W IW+ NDR+ D++I  S  ++   Q
Sbjct:    2 MGIRFSALLVAFLASIPYLLDLATRREYPVPPPE------GAVVVTGASTGIGAHAAHSLARAGFLVFAGVRKELDGETL-------KAEAPTLESQEN------IVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRAS-KGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ 331          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: EWM21817.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 257.3 bits (656), Expect = 7.600e-65
Identity = 151/350 (43.14%), Postives = 207/350 (59.14%), Query Frame = 0
Query:   17 VGIALVVLLI-----LPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKK-VDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVITPSPAQKGDVQ 361
            +GI    LL+     +P+++ L +R+ YP  P +      G +VVTGASTGIG HAA  LA+ GF+VFAGVRK  DGE L       K +  T ++         + P+ILDVTK  QI  A++TV   L   G  P +GLVNNAGV G   PVE+  +D  R+ F+VN+ G +A TKAFL LLR   +GR++N+SS+AG    P    Y  +K+ALEA SD LR+E+G LGVSVSV++P Y+ S IFGK   +  +    + E+   +YGHL          + KAS P V S AI  ALT+ +P+TRY   NV+G  A ++ W IW+ NDR+ D++I  S  ++   Q
Sbjct:    2 MGIRFSALLVAFLASIPYLLDLATRREYPVPPPE------GAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETL-------KAEAPTLESQEN------IVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRAS-KGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ 331          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: EWM25314.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 214.5 bits (545), Expect = 5.700e-52
Identity = 140/344 (40.70%), Postives = 194/344 (56.40%), Query Frame = 0
Query:    9 LFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDN---LVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            L  GV L +  A V+ ++   +   I RKR+P  P        G IV+TGASTGIG HAA +LA++G+IV+  VRKPAD EA+              Q     +    L P+I+DV +A  I     T+  EL+ + N+P +GLVNNAGV     P+E+ PL   R  F+++  GPL +T+  LP +R   +GRIVN+SS+   V  P GA Y  +K A+E +SD LR EL     SVS++QP Y+++ IF K T+  D +++  P E    YG+ +  +K       V KAS P V + AI HALTS YP TRY   NV+G PA  L W +W+  DRL D ++
Sbjct:   11 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKG------GAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAI--------------QALGLPN----LRPIIMDVAQAKSIENGAETILAELS-KNNIPLIGLVNNAGV-AQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRAN-KGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSP-EIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIM 326          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: WP_085249294.1 (SDR family NAD(P)-dependent oxidoreductase [Mycobacterium riyadhense] >ORW84999.1 hypothetical protein AWC22_12315 [Mycobacterium riyadhense])

HSP 1 Score: 212.2 bits (539), Expect = 2.800e-51
Identity = 139/298 (46.64%), Postives = 168/298 (56.38%), Query Frame = 0
Query:   54 IVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYA--LKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +V+TGASTGIGR +AL L + GF VFAG+RK ADGEAL +A  +                   L P+ LDVT    I AA R V + + R G     GLVNNAG T    PVEYL LD  R+  EVN  GPLAVTKAFLPLL     GRIVNV+S AG    PL A Y   K  LE LSD LR+ELG LGV VSVI+PG++ +++ GK     D  ++ LPEE    Y    A   + +    A+ S P V +  + HALTS  PRTRY  G   G    LL     +L+DR  DR+I
Sbjct:    4 VVITGASTGIGRASALALDRNGFRVFAGIRKQADGEALRVAASER------------------LTPVFLDVTAERSIGAAARLVADAVGRAGEAGLAGLVNNAGTT-LPGPVEYLALDAFRHQLEVNLVGPLAVTKAFLPLL-VRGGGRIVNVTSGAGKAGVPLMAPYVAAKHGLEGLSDVLRLELGQLGVGVSVIEPGFVATDMRGKLERDTDDVIRSLPEEGRSRYARQLAATAEAISTHAAQGSTPDVIADVVVHALTSKKPRTRYPAG--AGAKRMLLLRR--VLSDRQFDRII 277          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: WP_018465211.1 (KR domain-containing protein [Meiothermus timidus])

HSP 1 Score: 207.2 bits (526), Expect = 9.000e-50
Identity = 129/298 (43.29%), Postives = 182/298 (61.07%), Query Frame = 0
Query:   54 IVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLY--ALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            I++TGAS+GIG   ALYLA++G +V+AGVR+  DGE   LAHQ +                G+LHP++LDVT+   I  A R ++E+ +R       GLVNNAG+   A P+E+LPL+  R   EVN  G +AVT+A L +LRQ  +GRIVN+SS++G +  PL   YS +KFALEA+SD+LR EL   G+ VSVI+PG I + I+ K   +  Q +++LP E   LYG      ++ V+++  ++  P+  ++A+ HALT+  PRTRY  G   G    LL      L DRLLD +I
Sbjct:    4 ILITGASSGIGESCALYLAEKGHMVWAGVRRLEDGER--LAHQAK----------------GLLHPVLLDVTEGESIARAARVIREQASRLD-----GLVNNAGI-AVAGPLEFLPLEELRRQLEVNVIGQVAVTQAVLGMLRQ-GRGRIVNMSSISGRIAAPLFGPYSASKFALEAISDSLRRELKAWGIEVSVIEPGSIQTPIWSKGVSRGRQLLEKLPPEAKALYGRAIEGQIRYVESVDGRSLPPIEVARAVEHALTTPRPRTRYVVG--RGARIGLLF--ARFLPDRLLDEMI 272          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 203.4 bits (516), Expect = 1.300e-48
Identity = 135/344 (39.24%), Postives = 193/344 (56.10%), Query Frame = 0
Query:   18 GIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGV--LHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNL--VAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVITPSPAQKG 358
            G+ + +L +L +++++   K +P   S       G I++TG STGIGRHAA+ LA++G+ V+A VRK AD ++L                     K GV  L P+++DVTK  QI +A+ T+K     +G    +GLVNNAG++    P+E   LD  R  FEVN  G ++VT+AFLP++R E +GRIVNV S+AG +  P  A+YS TKF LE L+D LR E+   GVSVS+++P Y+ + I  K+T +     + +  E    Y   +A  +   L   A A  P V +KAI HALTS  P TRY   N  G PA + +   W+L DRL D V+    +  G
Sbjct:    7 GVLMGILAVLLYLLFVFPVKYFPVHDS-------GAILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSL--------------------KKEGVNTLIPIVMDVTKPDQIASAVDTIK-----KGGHKLIGLVNNAGISARV-PLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIR-ENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGE-AAATRWVSREMQDTYAWFFADFEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVLANDASISG 315          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: EWM22688.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 201.8 bits (512), Expect = 3.800e-48
Identity = 130/319 (40.75%), Postives = 176/319 (55.17%), Query Frame = 0
Query:   32 YLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLY--ALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRV 349
            +L+ R+ YP  P     +    IV++GASTGIGRHAA YLA+ GF V AGVR+ AD E L  AH                     LHP+ILDVT A+ + AA+    E       LP  GLVNNAG+ G   PVE   ++  R  FEVN    + + +AF+PLLR+ P GRIVNV S  GT+       Y+ +K A+E L+D++R+EL    +SVS++ PG + S ++GK T Q+   + +L  +   LY  L+    K V   + K S   V S+AI HAL S  P+TRY   +VNG P  LL     +L DR++D V
Sbjct:   21 HLVLRRAYPAPPPGNQAI----IVISGASTGIGRHAAEYLARLGFTVLAGVRREADMEDLRSAHLPS------------------LHPIILDVTNASDVRAAV----ERAEALAPLPVWGLVNNAGL-GYPIPVELADMEKARKLFEVNVLAVIGMAQAFVPLLRRAPGGRIVNVGSATGTMATQGDGIYASSKHAVEGLTDSMRLELAAWEMSVSLVVPGQVQSGMWGKLTGQNAPAINDLSADQYALYKPLFLQVEKAVSGFIPKLSPASVTSQAIAHALMSPQPKTRYLVASVNGVPLWLLRGLCGLLPDRVVDFV 312          
The following BLAST results are available for this feature:
BLAST of NO01G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855962.11.900e-14072.22short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM28976.11.200e-13972.22short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM28977.12.000e-12172.19short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005853543.19.000e-6643.433-hydroxybutyrate dehydrogenase [Nannochloropsis g... [more]
EWM21817.17.600e-6543.14short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM25314.15.700e-5240.70short-chain dehydrogenase reductase sdr [Nannochlo... [more]
WP_085249294.12.800e-5146.64SDR family NAD(P)-dependent oxidoreductase [Mycoba... [more]
WP_018465211.19.000e-5043.29KR domain-containing protein [Meiothermus timidus][more]
XP_004990606.11.300e-4839.24oxidoreductase [Salpingoeca rosetta] >EGD77262.1 o... [more]
EWM22688.13.800e-4840.75short-chain dehydrogenase reductase sdr [Nannochlo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008336NSK008336Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00500.1NO01G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668148gene_27Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100556g1gene1636Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00500.1NO01G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00500 ID=NO01G00500|Name=NO01G00500|organism=Nannochloropsis oceanica|type=gene|length=1436bp
ATGGCCATGCCACTAGTTCTCACCCTCTTCTTCGGGGTACTCCTGGCCGT
GGGTATCGCATTGGTGGTCCTCCTCATCCTCCCATTCGTCATCTATCTCA
TAAGCCGCAAGCGCTACCCCACCCTTCCTTCTCAGGCGTCTAATGTCACG
CTGGGCGGCATAGTGGTCACCGGTGCCTCGACAGGTATAGGAAGACATGC
AGCCTTGTACCTGGCCCAACGAGGGTTTATTGTCTTTGCCGGCGTGCGCA
AGCCTGCAGATGGAGAGGCACTCCTACTTGCACATCAACAAGAGAAAAAA
GATCATTCGACGAGCCAAACATCAGCCACAACGAGCAAAGGAGGTGTCCT
CCACCCACTCATCCTCGACGTGACCAAAGCTGCCCAAATCACTGCTGCCT
TGCGCACTGTAAAAGAGGAGCTGGCCCGCCGAGGTAATTTGCCGTTTCTG
GGACTTGTAAATAACGCAGGAGTAACTGGTGGGGCAGATCCCGTTGAGTA
CTTGCCGCTGGACTACAACAGATATGCGTTCGAAGTTAATTACCACGGGC
CTCTGGCAGTAACGAAAGCGTTTCTCCCTCTCCTCCGCCAAGAGCCCCAA
GGGCGGATTGTAAACGTGTCCAGCATGGCTGGGACGGTCACTCGTCCCTT
AGGCGCTACCTATTCCTGCACCAAATTCGCCTTGGAAGCCCTGAGTGATA
CTCTGCGGATGGAGCTCGGGCACCTAGGGGTCTCAGTCTCGGTGATTCAA
CCGGGCTATATCCACAGCGAGATATTTGGGAAAGCCACAGAGCAGCATGA
CCAGCGGATGCAAGAGCTGCCGGAGGAATGTGCGATGCTGTACGGCCATT
TGTATGCGCTCAAGAAGGTGGATAATTTGGTCGCTAAGGCCTCTGACCCA
GTTGTATGCTCGAAGGCCATCCACCATGCCTTGACCAGCGCGTACCCCCG
Ggtatgattttgagggaaaggaagggaagggagggggagcaagcgaaatg
ggtgtcgatcattaagtggctgaaactgttgtgcaacccatcccattttt
gattttggggtgggtttgattcgattcttccttttcatggatgtccgttt
gcctcgcctaccgtataaatacagcagtcactcaaagagagtgacccttc
acgaaaactcacccgctctcttcctcctttcccccaccttcccgccttcc
ttcattcattccctgtataaaagACGAGATACCAGCCGGGAAACGTGAAT
GGCACGCCTGCATCCTTATTAAGCTGGGGAATTTGGATATTGAACGACCG
ATTGCTGGATAGGGTGATAACACCGAGCCCGGCACAGAAAGGGGATGTCC
AGATTGGTGTAGTGAAGAGAGACGGGGAGGACAAGGAGGAGGGAGGGGTG
GAAGAGGGGAGGGAAGGGGGAAATGCGACGCAGTGA
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protein sequence of NO01G00500.1

>NO01G00500.1-protein ID=NO01G00500.1-protein|Name=NO01G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MAMPLVLTLFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVT
LGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKK
DHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFL
GLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQ
GRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQ
PGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDP
VVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVIT
PSPAQKGDVQIGVVKRDGEDKEEGGVEEGREGGNATQ*
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Synonyms
Publications